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Publications

Rapid and stable mobilization of CD8+ T cells by SARS-CoV-2 mRNA vaccine.
Oberhardt et al., Nature 2021, doi: 10.1038/s41586-021-03841-4.

Convergent use of phosphatidic acid for hepatitis C virus and SARS-CoV-2 replication organelle formation.
Tabata et al., Nat Commun. 2021, doi: 10.1038/s41467-021-27511-1.

Mapping single-cell data to reference atlases by transfer learning.
Lotfollahi et al., Nat Biotechnol. 2022, doi: 10.1038/s41587-021-01001-7.

Dynamics of spike-and nucleocapsid specific immunity during long-term follow-up and vaccination of SARS-CoV-2 convalescents.
Koerber et al., Nat Commun. 2022, doi: 10.1038/s41467-021-27649-y.

Temporal omics analysis in Syrian hamsters unravel cellular effector responses to moderate COVID-19. Nouailles et al., Nat Commun. 2021, doi: 10.1038/s41467-021-25030-7.

Single-cell RNA sequencing reveals ex vivo signatures of SARS-CoV-2-reactive T cells through 'reverse phenotyping'.
Fischer et al., Nat Commun. 2021, doi: 10.1038/s41467-021-24730-4.

SARS-CoV-2 neutralizing human recombinant antibodies selected from pre-pandemic healthy donors binding at RBD-ACE2 interface.
Bertoglio et al., Nat Commun. 2021, doi: 10.1038/s41467-021-21609-2.

Lung emphysema and impaired macrophage elastase clearance in mucolipin 3 deficient mice.
Spix et al., Nat Commun. 2022, doi: 10.1038/s41467-021-27860-x.

Inhibition of LTβR signalling activates WNT-induced regeneration in lung.
Conlon et al., Nature 2020, doi: 10.1038/s41586-020-03087-6.

Auto-aggressive CXCR6+ CD8 T cells cause liver immune pathology in NASH.
Dudek et al., Nature 2021, doi: 10.1038/s41586-021-03233-8.

Multilevel proteomics reveals host perturbations by SARS-CoV-2 and SARS-CoV.
Stukalov et al., Nature 2021, doi: 10.1038/s41586-021-03493-4.

Integrative Imaging Reveals SARS-CoV-2-Induced Reshaping of Subcellular Morphologies.
Cortese et al., CHM 2020, doi: 10.1016/j.chom.2020.11.003.

Severe COVID-19 Is Marked by a Dysregulated Myeloid Cell Compartment.
Schulze-Schrepping et al., Cell 2020, doi: 10.1016/j.cell.2020.08.001.

Characterization of pre-existing and induced SARS-CoV-2-specific CD8+ T cells.
Schulien et al., Nat. Med. 2021, doi: 10.1038/s41591-020-01143-2.

Structures and distributions of SARS-CoV-2 spike proteins on intact virions.
Ke et al., Nature 2020, doi: 10.1038/s41586-020-2665-2.

The Human Lung Cell Atlas: A High-Resolution Reference Map of the Human Lung in Health and Disease.
Schiller et al., Am J Respir Cell Mol Biol. 2019, doi: 10.1165/rcmb.2018-0416TR.

Single-cell meta-analysis of SARS-CoV-2 entry genes across tissues and demographics.
Muus et al., Nat. Med. 2021, doi: 10.1038/s41591-020-01227-z.

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