Databases and Services (Generic)

NCBI [www.ncbi.nlm.nih.gov]

Uniprot [www.ebi.ac.uk/uniprot/search/textSearch.html]

Ensembl [www.ebi.ac.uk/ensembl]

Genome information at UCSC [http://genome.ucsc.edu]

Genome information at Stanford [http://genome-www.stanford.edu]

Database meta-search-Harvester [http://harvester.fzk.de]

Interpro [www.ebi.ac.uk/interpro]

BLAST at NCBI [www.ncbi.nlm.nih.gov/blast]

SMART [http://smart.embl-heidelberg.de]

String [http://string.embl-heidelberg.de]

TMpred [www.ch.embnet.org/software/TMPRED_form.html]

Signal peptide prediction [www.cbs.dtu.dk/services/SignalP]

Pfam search [www.sanger.ac.uk/Software/Pfam]

Webcutter [www.firstmarket.com/cutter/cut2.html]

Genepalette [www.genepalette.org]

Databases (Organism-specific)

Flybase [www.flybase.org]

FlyMine [www.flymine.org]

BLAST at Flybase [www.flybase.net/blast]

SuperFly [http://superfly.ucsd.edu]

Wormbase [www.wormbase.org]

Fruitfly at Berkeley [www.fruitfly.org]

Mouse catalog [www.muridae.com/wmc]

Mouse gene atlas [http://genex.hgu.mrc.ac.uk]

Transgenic mice [http://tbase.jax.org]

Databases (Microarray)

GEO [www.ncbi.nlm.nih.gov/projects/geo]

ArrayExpress [www.ebi.ac.uk/arrayexpress]

Databases (RNAi and Cell-assays)

GenomeRNAi [http://rnai.dkfz.de]

LIFEdb [www.dkfz.de/LIFEdb]

FLIGHT [http://flight.licr.org]

FlyRNAi [http://www.flyrnai.org]

Pathways

Biocarta pathways [www.biocarta.com]

KEGG pathways [www.genome.jp/kegg/pathway.html]

Reactome [www.reactome.org]

Wnt pathways [www.stanford.edu/~rnusse/wntwindow.html]