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Division Signaling and Functional Genomics


 

 

 

External Links

 

Databases and Services (Generic)

NCBI [www.ncbi.nlm.nih.gov]
Uniprot [www.ebi.ac.uk/uniprot/search/textSearch.html]
Ensembl [www.ebi.ac.uk/ensembl]
Genome information at UCSC [genome.ucsc.edu]
Genome information at Stanford [genome-www.stanford.edu]
Database meta-search-Harvester [harvester.fzk.de]
Interpro [www.ebi.ac.uk/interpro]

BLAST at NCBI [www.ncbi.nlm.nih.gov/blast]
SMART [smart.embl-heidelberg.de]
String [string.embl-heidelberg.de]
TMpred [www.ch.embnet.org/software/TMPRED_form.html]
Signal peptide prediction [www.cbs.dtu.dk/services/SignalP]
Pfam search [www.sanger.ac.uk/Software/Pfam]
Webcutter [www.firstmarket.com/cutter/cut2.html]
Genepalette [www.genepalette.org]

 

Databases (Organism-Specific)

FlyBase [www.flybase.org]
FlyMine [www.flymine.org]
BLAST at FlyBase [www.flybase.net/blast]
SuperFly [superfly.ucsd.edu]
Wormbase [www.wormbase.org]
Fruitfly at Berkeley [www.fruitfly.org]
Mouse catalog [www.muridae.com/wmc]
Mouse gene atlas [genex.hgu.mrc.ac.uk]
Transgenic mice [tbase.jax.org]

 

Databases (Microarray)

GEO [www.ncbi.nlm.nih.gov/projects/geo]
ArrayExpress [www.ebi.ac.uk/arrayexpress]

 

Databases (RNAi and Cell-Assays)

GenomeRNAi [www.genomernai.org]
LIFEdb [www.dkfz.de/LIFEdb]
FLIGHT [flight.licr.org]
FlyRNAi [www.flyrnai.org]

 

Pathways

Biocarta pathways [www.biocarta.com]
KEGG pathways [www.genome.jp/kegg/pathway.html]
Reactome [www.reactome.org]
Wnt pathways [www.stanford.edu/~rnusse/wntwindow.html]