del_kre6

23-Jul-2002 by nhauser
multiconditional experiment no. (if not recombined):
hybridisations (conditions & MCE(s) marked by brackets): {{18,19,20,21},{26,27,28,29}}
normalization method [parameters]: log. reg. 2
intensity threshold: 400000

			factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
			condition1	condition0(CONTROL)	condition1	functional category	description
			delta kre6	wt, strain AR27	delta kre6


*	YAL001C	TFC3______	+1.11	99141	110121	transcription	TFIIIC 138 kD subunit
	YBR166C	TYR1______	+1.00	376129	377685	tyrosine biosynthesis	prephenate dehydrogenase (NADP+
	YCR102W	__________	-1.10	167403	151779	unknown	unknown
	YDR037W	KRS1______	-1.16	2470167	2133191	protein synthesis	tRNA synthetase, lysyl
	YDR404C	RPB7______	-1.20	605771	503552	transcription	RNA polymerase II 19 kD subunit
	YER099C	PRS2______	-1.20	601923	500438	purine biosynthesis	ribose-phosphate pyrophosphokinase
	YGL097W	SRM1______	-1.31	701082	536174	nuclear targeting; mating	GDP/GTP exchange factor for Gsp1p/Gsp2p
	YGR204W	ADE3______	-1.25	520141	416365	purine biosynthesis	C1-5,6,7,8-tetrahydrofolate synthase
	YIL001W	__________	+1.22	197188	240512	unknown	unknown
	YJL098W	SAP185____	-1.08	227752	211700	cell cycle	Sit4p-associated protein
	YKL095W	YJU2______	-1.16	124741	107866	unknown	unknown
	YLR030W	__________	+1.00	130945	131072	unknown	unknown
	YLR402W	__________	-1.15	125157	108802	unknown	unknown
	YNL189W	SRP1______	-1.02	1314089	1282529	nuclear protein targeting	alpha-karyopherin
	YOL095C	HMI1______	+1.01	177381	178613	unknown	mitochondrial DNA helicase (putative)
	YOR305W	__________	+1.05	607611	635696	unknown	unknown
	YPL283C	YRF1-7____	+1.06	134932	143434	unknown	Y' helicase (subtelomerically-encoded)
	YBL095W	__________	+1.17	227409	265263	unknown	unknown
	YCL001W	RER1______	+1.12	105053	117764	secretion; protein targeting	ER protein retention (Golgi membrane protein)
	YDL097C	RPN6______	+1.22	1233382	1502102	protein degradation	26S proteasome regulatory subunit
	YDR220C	__________	-1.01	112050	110736	unknown	unknown
	YEL001C	__________	+1.28	1153008	1472961	unknown	unknown
	YFR020W	__________	+1.07	195000	209357	unknown	unknown
	YGR025W	__________	-1.08	115766	106914	unknown	unknown
	YHR038W	FIL1______	+1.04	221148	230651	protein syntehsis	robosomal protein, mitochondrial (putative)
	YIR008C	PRI1______	-1.01	296776	294434	DNA replication	DNA primase subunit
	YJR064W	CCT5______	-1.20	1381352	1148756	protein targeting	cytoplasmic chaperonin complex
	YKR061W	KTR2______	+1.81	199645	360484	protein glycosylation	putative mannosyltransferase; type 2 membrane protein
	YLR218C	__________	+1.37	151242	207037	unknown	unknown
	YML088W	__________	-1.05	374057	355113	unknown	unknown
	YNL001W	DOM34_____	-1.31	539929	412547	protein synthesis (putative)	unknown
	YNR040W	__________	-1.00	103884	103610	unknown	unknown; zinc regulated
	YOR119C	RIO1______	-1.58	346700	220115	unknown	unknown; similar to a C.elegans ZK632.3 protein
	YPL095C	__________	+1.05	221569	232503	unknown	unknown; similar to Ybr177p
	YPR186C	PZF1______	+1.00	353012	353962	transcription	TFIIIA
	YAL014C	__________	+1.01	381315	384126	unknown	unknown
	YBR178W	__________	-1.07	105493	98300	unknown	unknown
	YCRX08W	__________	-1.00	134880	134603
	YDR049W	__________	-1.08	194595	180988	unknown	unknown
	YDR416W	SYF1______	-1.11	196881	177734	cell cycle (putative)	unknown; synthetic lethal with cdc40
	YER111C	SWI4______	+1.09	254501	277518	cell cycle	transcription factor
	YGL109W	__________	-1.13	298577	263867	unknown	unknown
	YGR216C	GPI1______	-1.02	281093	274675	protein processing	N-acetylglucosaminylphosphatidylinositol synthesis
	YIL013C	PDR11_____	+1.01	140852	142038	transport	ATP-binding cassette (ABC) family
	YJL110C	GZF3______	+1.01	305179	308295	nitrogen catabolism	transcription factor
	YKL106W	AAT1______	-1.38	325575	235132	aspartate metabolism?	aspartate aminotransferase,
	YLR040C	__________	-1.18	1153960	976886	unknown	unknown
	YLR412W	__________	-1.02	358209	350289	unknown	unknown
	YMR147W	__________	-1.05	159593	151606	unknown	unknown
	YNL201C	__________	+1.05	101178	106578	unknown	unknown
	YOL105C	WSC3______	-1.36	348077	256501	signaling	stress response
	YOR317W	FAA1______	+1.31	681196	894129	fatty acid metabolism	long chain fatty acyl:CoA synthetase
	YPR012W	__________	+1.04	888653	924348	unknown	unknown
	YBL105C	PKC1______	-1.20	179192	148897	cell wall biogenesis	protein kinase C
	YCL012W	__________	+1.23	170015	209176	unknown	unknown
	YDL109C	__________	-1.14	133917	117674	unknown	unknown
	YDR232W	HEM1______	-1.02	294183	288706	heme biosynthesis	5-aminolevulinate synthase
	YEL013W	VAC8______	+1.09	270425	293984	vacuolar protein targeting	vacuolar protein
	YFR031C	RPL2A_____	+1.17	105721	123848	protein synthesis	ribosomal protein L2A
	YGR035C	__________	-1.30	149017	114978	unknown	unknown
	YHR049W	__________	-1.41	1009103	714857	unknown	unknown
	YIR019C	MUC1______	+1.08	149453	162027	flocculation and invasive growth	unknown
	YJR076C	CDC11_____	+1.01	806498	815156	cytokinesis	septin
	YKR073C	__________	-1.09	137962	126795	unknown	unknown
	YLR228C	ECM22_____	-1.13	199588	177121	unknown	unknown; similar to transcription factors, has Zn[2]-Cys[6]
	YML099C	ARG81_____	+1.09	170550	185603	arginine metabolism	transcription factor
	YNL013C	__________	-1.01	498406	491666	unknown	unknown
	YNR052C	POP2______	+1.09	1073183	1167647	glucose derepression	component of CCR4 complex
	YOR131C	__________	+1.13	399987	451549	unknown	unknown; similar to E. coli protein yhfE gene of the dam
	YPL107W	__________	+1.11	302355	336075	unknown	unknown
	YPR198W	SGE1______	+1.59	401546	637466	crystal violet resistance	transporter, major facilitator superfamily
	YAL026C	DRS2______	-1.04	275695	265751	transport	Ca(2+) transporting ATPase
	YBR190W	__________	-1.08	199189	184044	unknown	unknown; similar to glycosyl hydrolases
	YCRX20C	__________	-1.14	125239	110168
	YDR061W	__________	+1.10	303296	333245	unknown	unknown; similar to E. coli photorepair protein
	YDR428C	__________	+1.11	226653	250925	unknown	unknown
	YER122C	GLO3______	+1.06	664751	705055	cell proliferation	unknown
	YGL121C	__________	+2.14	183175	391725	unknown	unknown
	YGR228W	__________	+1.19	754394	895235	unknown	unknown
	YIL024C	__________	+1.04	346079	359768	unknown	unknown
	YJL122W	__________	-1.37	867844	634065	unknown	unknown
	YKL118W	__________	-1.12	148558	132152	unknown	unknown
	YLR052W	__________	+1.01	337430	342403	unknown	unknown
	YLR424W	__________	-1.02	186801	183160	unknown	unknown; similar to retrovirus-related protease
	YMR158W	__________	+1.04	278984	289888	unknown	unknown; similar E. coli ribosomal protein S8
	YNL213C	__________	+1.16	239877	278713	unknown	unknown
	YOL117W	__________	+1.08	138100	149382	unknown	unknown
	YOR329C	SCD5______	+1.02	290883	297749	secretion	suppressor of clathrin deficiency
	YPR024W	YME1______	+1.02	279907	286210	mitochondrial protein processing	AAA family protease
	YBR004C	__________	+1.33	226656	302425	unknown	expressed during sporulation
	YCL025C	AGP1______	+1.10	177314	194971	transport	amino acid permease
	YDL121C	__________	-1.38	716406	517763	unknown	unknown
	YEL024W	RIP1______	-1.05	714971	680608	respiration	ubiquinol cyt.-c reductase iron-sulfur protein
	YFR041C	__________	+1.13	410796	463256	unknown	unknown; similar to dnaJ proteins Sis1p, Mdj1p, and Scj1p
	YGR042W	__________	+1.08	293043	316289	unknown	unknown
	YHR059W	__________	-1.10	278446	252990	unknown	unknown
	YIR029W	DAL2______	+1.08	214099	231861	allantoin utilization	allantoicase
	YJR089W	BIR1______	-1.04	173823	167694	unknown	unknown
	YKR085C	MRPL20____	-1.03	393008	382048	protein synthesis	ribosomal protein, mitochondrial L20
	YLR240W	VPS34_____	-1.02	125148	122265	vacuolar protein targeting	phosphatidylinositol 3-kinase

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YML109W	ZDS2______	-1.07	231520	216642	cell cycle	Zds1 homolog
YNL025C	SSN8______	-1.01	147696	145976	transcription	RNA polymerase II mediator subunit
YNR064C	__________	-1.07	187943	176296	unknown	unknown; similar to Rhodobacter capsulatus bchO
YPL119C	DBP1______	-1.12	161252	144018	mRNA processing	RNA helicase
YAL035W	FUN12_____	-1.33	774776	584397	unknown	unknown; similar to Bacillus subtilis IF2
YBR202W	CDC47_____	-1.27	350562	276165	DNA replication	MCM initiator complex
YDR073W	SNF11_____	+1.08	316073	342166	transcription	component of SWI/SNF global activator complex
YDR440W	DOT1______	-1.24	206223	166826	meiosis, checkpoint; transcriptional silencing	unknown
YER134C	__________	+1.01	91607	92726	unknown	unknown
YGL133W	ITC1______	+1.18	161373	190195	chromatin structure	chromatin remodeling complex subunit
YGR240C	PFK1______	-1.07	189876	177199	glycolysis	phosphofructokinase
YIL036W	CST6______	+1.14	307065	349818	chromosome stability	unknown; similar to Mei4p and to cAMP response element
YJL134W	LCB3______	-1.16	444193	384574	sphingolipid metabolism	sphingoid base-phosphate phosphatase
YKL130C	SHE2______	-1.02	250193	245055	cell polarity	asymmetric HO expression
YLR064W	__________	-1.08	529063	490260	unknown	unknown
YLR434C	__________	-1.36	190177	139685	unknown	unknown
YNL225C	CNM67_____	+1.18	147006	173651	cytoskeleton	spindle pole body component
YOL129W	__________	+1.69	586629	990485	unknown	unknown
YOR341W	RPA190____	-1.89	833115	439830	transcription	RNA polymerase I 190 kD subunit
YPR036W	VMA13_____	+1.03	1355383	1398833	vacuolar acidification	vacuolar H+-ATPase V1 domain 54 KD subunit
YBR014C	__________	+1.22	343765	418793	unknown	unknown; similar to glutaredoxin
YCL037C	SRO9______	-1.00	122730	122592	cytoskeleton	actin filament organization
YDL132W	CDC53_____	+1.04	274880	286777	cell cycle	G1 cyclin degradation
YDR256C	CTA1______	-1.06	159775	151045	oxidative stress response	catalase A
YEL036C	ANP1______	+1.04	1269342	1321202	protein glycosylation	mannosyltransferase complex subunit
YFR053C	HXK1______	+1.40	816900	1142913	glycolysis	hexokinase I
YGR054W	__________	-1.18	277098	234650	unknown	unknown; similar to C. elegans C14B9.6 protein
YHR070W	__________	-1.30	262270	201918	unknown	unknown
YIR041W	__________	+1.10	268652	296476	unknown	unknown; similar to Pau3p, Yil176p, Yil011p and other
YJR100C	__________	+1.10	309561	339325	unknown	unknown
YKR097W	PCK1______	-1.01	157208	154921	TCA cycle	phosphoenolpyruvate carboxykinase
YLR252W	__________	+1.27	134954	171441	unknown	unknown
YML120C	NDI1______	+1.32	211826	279651	oxidative phosphorylation	NADH-ubiquinone-6 oxidoreductase
YNR076W	PAU6______	+1.09	377732	412035	unknown	seripauperin family
YOR153W	PDR5______	+1.42	1750802	2485478	drug resistance	transporter
YPL131W	RPL5______	-1.01	15729333	15540075	protein synthesis	ribosomal protein L5
YAL046C	__________	+1.10	308829	340205	unknown	unknown
YBR214W	SDS24_____	+1.32	111287	146919	unknown	unknown; nuclear protein; similar to S. pombe sds23
YDR085C	AFR1______	+1.67	172743	288250	mating	cytoskeletal protein, similar to arrestins
YDR452W	PHM5______	+1.25	439420	549426	phosphate metabolism (putative)	vacuolar polyphosphatase
YER144C	UBP5______	+1.24	146264	181864	unknown	ubiquitin pathway
YGL145W	TIP20_____	+1.01	329934	333450	secretion	unknown; interacts with Sec20p
YGR252W	GCN5______	-1.02	227773	224182	chromatin structure	histone acetyltransferase
YIL048W	NEO1______	+1.14	228640	259675	neomycin resistance	ATPase
YJL146W	IDS2______	-1.02	285941	279168	signaling, meiosis pathway	Putative activator of Ime2p
YKL142W	MRP8______	+2.06	572017	1177991	protein synthesis	ribosomal protein, mitochondrial small subunit
YLR076C	__________	-1.28	15572295	12187950	unknown	unknown
YLR446W	__________	-1.48	345398	233270	unknown	unknown; similar to human hexokinase I
YMR179W	SPT21_____	+1.17	223198	260824	transcription	transcriptional regulator
YNL237W	YTP1______	+1.11	145658	161356	unknown	unknown; similar to mitochondrial electron transport proteins
YOL141W	PPM2______	-1.01	108995	108048	protein modification	carboxymethyltransferase
YOR351C	MEK1______	+1.01	108543	110102	meiosis	protein kinase
YPR048W	TAH18_____	-1.22	204292	167330	unknown	unknown; similar to NAPDH-cytochrome P450 reductase
YBR026C	(MRF1)____	+1.48	344562	509272	mitochondrial respiration	ARS-binding protein
YCL049C	__________	+1.44	234757	338349	unknown	unknown
YDL143W	CCT4______	-1.16	1276791	1097916	protein folding	cytoplasmic chaperonin subunit
YDR264C	AKR1______	+1.00	319834	320851	signaling, pheromone pathway; endocytosis; cell shape control	ankyrin-containing protein
YEL048C	__________	-1.18	165698	139980	unknown	unknown
YGR066C	__________	-1.07	116634	109252	unknown	unknown; similar to Vid24p
YHR080C	__________	+1.14	149993	171455	unknown	unknown; similar to Yfl042p
YJR112W	NNF1______	-1.37	441936	321479	mitosis	nuclear envelope protein
YLR261C	__________	+1.13	324192	365305	unknown	unknown
YML132W	COS3______	+1.25	1060052	1330145	unknown	unknown; similar to subtelomerically-encoded proteins
YNL047C	__________	+1.06	166059	176197	unknown	unknown; similar to Ask10p
YOR165W	__________	-1.01	233705	230410	unknown	unknown; similar to transcription factors, has Zn[2]-Cys[6]
YPL143W	RPL33A____	-1.08	2569832	2378693	protein synthesis	ribosomal protein L33A
YAL060W	__________	+1.21	423926	513900	unknown	unknown; similar to alcohol/sorbitol dehydrogenase
YBR226C	__________	-1.02	90802	88743	unknown	unknown
YDR097C	MSH6______	-1.09	158804	145482	DNA repair	MutS homolog; mismatch repair
YDR464W	SPP41_____	+1.04	113361	118162	splicing	negative regulator of spliceosome genes
YER154W	OXA1______	-1.03	534712	517900	respiration	cytochrome c oxidase assembly
YGL157W	__________	+1.25	291909	366296	unknown	unknown; similar to tomato dihydroflavonol 4-reductase
YGR264C	MES1______	-1.39	1216729	872537	protein synthesis	tRNA synthetase, methionyl
YIL060W	__________	-1.93	7807524	4036609	unknown	unknown
YJL158C	CIS3______	+2.14	5795684	12398313	unknown	unknown; overexpression suppresses cik1 deletion
YKL154W	SRP102____	+1.24	1008798	1247531	secretion	signal recognition particle subunit
YLR088W	GAA1______	+1.14	201431	228790	protein processing	GPI:protein transamidase component
YLR458W	__________	+1.17	137550	161602	unknown	unknown
YMR191W	__________	+1.69	293534	496691	unknown	unknown
YNL249C	MPA43_____	+1.10	210015	231270	unknown	unknown; similar to YDR109c
YOL153C	__________	+1.18	172926	204795	unknown	unknown
YOR363C	PIP2______	+1.16	155243	179709	peroxisome proliferation	transcription factor
YPR060C	ARO7______	-1.08	539406	500193	aromatic amino acid biosynthesis	chorismate mutase
YBR038W	CHS2______	-1.06	94859	89477	cell wall biogenesis	chitin synthase II
YCL061C	__________	-1.13	645635	570035	unknown	unknown
YDL155W	CLB3______	-1.06	429630	403447	cell cycle	G2/M cyclin
YDR276C	PMP3______	-1.04	1257078	1210801	salt tolerance (putative)	unknown
YEL059W	__________	-1.03	155738	150538	unknown	unknown
YGR078C	PAC10_____	-1.40	645817	461838	cytoskeleton	non-native actin binding complex subunit
YHR092C	HXT4______	-1.02	146716	143764	transport	hexose permease
YJR124C	__________	-1.45	523438	361141	unknown	unknown; similar to multidrug resistance proteins
YLR272C	YCS4______	-1.03	186069	179791	mitosis, sister chromatid cohesion	cohesin complex component
YMR011W	HXT2______	-1.43	1863734	1300585	transport	hexose permease
YNL057W	__________	+1.36	273578	372131	unknown	unknown
YOR177C	__________	+1.27	139808	177547	unknown	unknown
YPL155C	KIP2______	+1.05	161437	169804	cytoskeleton (putative)	kinesin-related protein
YAR003W	__________	-1.07	140248	131642	unknown	unknown
YBR238C	__________	-1.02	251381	245838	unknown	unknown
YDR107C	__________	+1.15	155431	178068	unknown	unknown; similar to Emp70p
YDR476C	__________	+1.16	289993	337455	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YER164W	CHD1______	-1.28	363467	283347	transcription	chromodomain-helicase-DNA-binding (CHD) family
YGL169W	SUA5______	-1.54	497755	323321	protein synthesis	translation initiation protein
YGR276C	RNH70_____	-1.28	530847	414814	DNA replication (putative)	ribonuclease H
YIL070C	MAM33_____	-1.05	385464	365818	respiration	mitochondrial acidic matrix protein
YJL170C	ASG7______	-1.03	132140	128613	unknown	unknown
YKL166C	TPK3______	-1.13	204916	182017	signaling, nutrient control of cell growth	cAMP-dependent protein kinase catalytic subunit
YLR100W	ERG27_____	-1.24	1777218	1436918	sterol metabolism	3-keto sterol reductase
YMR202W	ERG2______	-1.51	1617619	1068207	sterol metabolism	C-8 sterol isomerase
YNL261W	ORC5______	-1.13	339450	299685	DNA replication	origin recognition complex, 50 kD subunit
YOL165C	AAD15_____	+1.14	409612	465194	unknown	hypothetical aryl-alcohol dehydrogenase
YOR375C	GDH1______	+2.27	714316	1623981	glutamate biosynthesis	glutamate dehydrogenase
YPR072W	NOT5______	-1.01	358333	356533	transcription	global negative regulator cpmplex component
YBR050C	REG2______	+1.03	120170	124355	glucose repression	(putative) Glc7p regulatory subunit
YCL076W	__________	-1.05	110703	104963	unknown	unknown
YDL167C	NRP1______	-1.27	360886	285077	unknown	unknown
YDR288W	__________	-1.06	297928	281307	unknown	unknown
YEL071W	DLD3______	+1.16	728341	843940	pyruvate metabolism	D-lactate dehydrogenase
YGR090W	__________	-1.19	331560	279405	unknown	unknown
YHR104W	GRE3______	+1.41	411519	582069	unknown	induced by osmotic stress
YJR136C	__________	-1.11	219086	196581	unknown	unknown
YLR284C	ECI1______	-1.09	160061	147312	unknown	putative enoyl-CoA hydratase, peroxisomal
YMR023C	MSS1______	+1.23	168466	206891	protein synthesis (putative)	mitochondrial GTPase; COX1 expression
YNL069C	RPL16B____	-1.19	9897224	8295346	protein synthesis	ribosomal protein L16B
YOR189W	__________	+1.19	378280	451837	unknown	unknown
YPL167C	REV3______	+1.11	129890	143657	DNA repair	polymerase zeta subunit
YAR028W	__________	+1.17	236608	276359	unknown	unknown; similar to subtelomerically-encoded proteins
YBR250W	__________	+1.02	115596	117482	unknown	unknown
YDR119W	__________	-1.46	1274227	871925	unknown	unknown; similar to human cystic fibrosis
YDR488C	PAC11_____	-1.36	192693	141644	unknown	unknown; required in absence of Cin8p
YER174C	GRX4______	-1.23	537428	437714	oxidative stress response	glutaredoxin
YGL181W	GTS1______	+1.04	421224	438771	heat shock, flocculation, and bud emergence	transcription factor
YGR288W	MAL13_____	-1.07	179529	167184	maltose utilization	regulator of maltose metabolic genes
YJL182C	__________	-1.08	114000	105319	unknown	unknown
YKL178C	STE3______	-1.72	2375117	1379711	mating	a-factor receptor
YLR112W	__________	-1.32	189823	143471	unknown	unknown
YMR214W	SCJ1______	+1.14	553901	628806	unknown	unknown; similar to E. coli DnaJ
YNL273W	TOF1______	+1.06	345132	366675	unknown	topoisomerase I interacting factor
YOR011W	__________	+1.13	186786	211486	unknown	ATP-binding cassette (ABC) superfamily
YOR387C	__________	-1.01	162729	161508	unknown	unknown
YPR084W	__________	+1.05	232714	245352	unknown	unknown
YBR062C	__________	-1.01	255687	254278	unknown	unknown
YCLX12W	__________	-1.07	262873	245403
YDL179W	PCL9______	+1.11	209491	231831	cell cycle	cyclin (Pho85p)
YDR300C	PRO1______	-1.17	433571	369569	proline biosynthesis	glutamate 5-kinase
YER005W	YND1______	-1.03	279583	272323	protein glycosylation (putative)	apyrase (NDPase/NTPase)
YGR102C	__________	+1.19	340750	405238	unknown	unknown
YHR116W	__________	-1.13	334793	295377	unknown	unknown
YJR148W	BAT2______	-1.69	1620754	957029	branched chain amino acid biosynthesis	transaminase
YLR295C	ATP14_____	+1.32	346026	455459	ATP synthesis	F1F0-ATPase complex, subunit h
YMR034C	__________	+1.14	154894	176765	unknown	unknown
YNL081C	__________	+1.15	435036	501964	unknown	unknown; similar to mitochondrial ribosomal protein S13 of
YOR199W	__________	+1.13	183464	206721	unknown	unknown
YPL179W	PPQ1______	+1.09	428584	467448	translational regulation	protein phosphatase
YBL001C	ECM15_____	+1.48	672275	997967	cell wall biogenesis	unknown
YBR262C	__________	-1.03	416668	402750	unknown	unknown
YDL001W	__________	-1.13	254288	224889	unknown	unknown; similar to Yfr048p
YDR131C	__________	-1.05	158734	151423	unknown	unknown
YDR500C	RPL37B____	-1.04	8023142	7701783	protein synthesis	ribosomal protein L37B
YFL-TYA	TY2A______	+1.21	244379	295726
YGL193C	__________	-1.06	290288	274558	unknown	unknown
YHL001W	RPL14B____	-1.09	15382837	14132886	protein synthesis	ribosomal protein L14B
YIL092W	__________	-1.12	307551	274763	unknown	unknown
YJL194W	CDC6______	-1.18	486993	413313	DNA replication	pre-initiation complex formation
YKL190W	CNB1______	+1.10	827239	906392	signaling	calcineurin regulatory B subunit
YLR124W	__________	-1.04	106615	102178	unknown	unknown
YML001W	YPT7______	+1.12	188886	211849	endocytosis	GTP-binding protein, rab family
YMR226C	__________	+1.06	1619836	1719218	unknown	unknown; similar to insect-type alcohol dehydrogenase,
YOR023C	AHC1______	+1.05	336990	354993	chromatin structure	histone acetyltransferase complex subunit
YPL001W	HAT1______	-1.05	375814	358426	chromatin structure	histone acetyltransferase complex subunit
YPR096C	__________	-1.16	128710	111267	unknown	unknown
YBR074W	__________	-1.37	253634	185747	unknown	unknown; similar to Ape3p (aminopeptidase Y)
YCR012W	PGK1______	+1.01	9950413	10013516	glycolysis	phosphoglycerate kinase
YDL191W	RPL35A____	-1.10	5972627	5448413	protein synthesis	ribosomal protein L35A
YDR312W	SSF2______	-1.14	937071	825088	signaling (putative)	suppresses G-protein beta subunit mutation
YGL001C	ERG26_____	-1.03	297202	289376	sterol metabolism	sterol C-3 dehydrogenase
YGR112W	SHY1______	+1.04	192228	199037	respiration	unknown
YHR128W	FUR1______	-1.65	1643833	998232	pyrimidine salvage pathway	uracil phosphoribosyltransferase
YJL001W	PRE3______	+1.26	1089355	1375092	protein degradation	20S proteasome subunit (beta1)
YKL001C	MET14_____	+1.06	139161	146825	sulfate assimilation	adenylylsulfate kinase
YLL001W	DNM1______	+1.17	337941	394798	endocytosis	dynamin-related protein
YLR307W	CDA1______	+1.02	110365	112678	sporulation	chitin deacetylase
YNL093W	YPT53_____	+1.22	108083	131715	endocytosis	GTP-binding protein, rab family
YOL001W	PHO80_____	+1.11	255624	284252	cell cycle	cyclin (Pho85p)
YOR211C	MGM1______	+1.13	130187	147149	mitochondrial genome maintenance	dynamin family protein
YPL190C	NAB3______	+1.04	592632	619213	mRNA splicing	nuclear polyadenylated RNA-binding protein
YAR050W	FLO1______	+1.06	111485	118670	flocculation	cell wall protein
YBL011W	SCT1______	-1.11	186640	168364	unknown	suppresses a choline-transport mutant
YBR274W	CHK1______	-1.02	203334	199386	cell cycle	DNA damage checkpoint protein kinase
YDL013W	HEX3______	+1.01	205668	208316	hexose metabolism (putative)	unknown
YDR143C	SAN1______	-1.17	199004	170225	silencing	(putative) transcriptional regulator
YDR512C	__________	+1.32	362896	480322	unknown	unknown
YFL010C	__________	+1.38	1245147	1724509	unknown	unknown
YGL205W	POX1______	-1.09	140071	128238	fatty acid metabolism	acyl-CoA oxidase
YHL009C	YAP3______	-1.03	206924	201670	transcription	basic leu zipper transcription factor
YIL103W	__________	-1.07	432862	403656	unknown	unknown; similar to diptheria toxin resistance protein
YJL206C	__________	-1.03	149307	144386	unknown	unknown; similar to Put3p and other transcription
YKL202W	__________	+1.11	116741	129030	unknown	unknown
YLR136C	TIS11_____	+1.49	115457	172186	unknown	unknown
YML011C	__________	+1.04	249569	258946	unknown	unknown
YMR238W	DFG5______	+2.81	615934	1730769	pseudohyphal growth	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YNL295W	__________	+1.03	165129	170675	unknown	unknown
YOR035C	SHE4______	+1.14	194713	222762	asymmetric HO expression	unknown
YPL013C	__________	+1.16	453541	527341	protein synthesis	ribosomal protein, mitochondrial S16
YPR108W	RPN7______	-1.04	750134	718445	protein degradation	26S proteasome regulatory subunit
YBR085W	AAC3______	-1.22	309123	253288	transport	mitochondrial ADP/ATP translocator
YCR023C	__________	-1.23	263992	214121	unknown	major facilitator superfamily
YDL203C	__________	-1.24	184998	149739	unknown	unknown
YDR322W	MRPL35____	-1.04	267717	257851	protein synthesis	ribosomal protein, mitochondrial L35
YER025W	GCD11_____	-1.35	1762352	1301975	protein synthesis	translation initiation factor eIF2 gamma subunit
YGL013C	PDR1______	-1.12	212457	189571	transport	transcription factor, regulates ABC transporters
YGR124W	ASN2______	-1.03	2166161	2099717	asparagine biosynthesis	asparagine synthetase
YHR139C	SPS100____	-1.09	162571	149002	sporulation	spore wall maturation protein
YJL013C	MAD3______	-1.22	389220	318969	cell cycle	spindle checkpoint complex subunit
YKL012W	PRP40_____	+1.18	255501	301176	mRNA splicing	U1 snRNP protein
YLL013C	__________	-1.11	438437	393358	unknown	unknown; similar to Drosophila pumilio protein
YLR318W	EST2______	-1.11	197534	178106	telomere length regulation	telomerase catalytic subunit
YMR055C	BUB2______	+1.03	158649	163701	cell cycle, checkpoint	unknown
YNL105W	__________	-1.03	111094	108335	unknown	unknown
YOL013C	HRD1______	+1.08	203935	220813	protein degradation	unknown; required to degrade misfolded ER lumenal and integral membrane proteins
YOR223W	__________	+1.07	314316	336420	unknown	unknown; similar to class II family of aminoacyl-tRNA
YPL202C	__________	-1.05	338231	321613	unknown	unknown; similar to Rcs1p
YAR073W	IMD1______	-1.77	1589892	898126	unknown	unknown; similar to Pur5p, may be an inosine-5'-monophosphate dehydrogenase
YBL023C	MCM2______	-1.21	306363	252305	DNA replication	MCM initiator complex
YBR286W	APE3______	+1.03	1021727	1056339	protein degradation	vacuolar aminopeptidase Y
YDL025C	__________	+1.05	158568	167246	unknown	putative protein kinase
YDR155C	CPH1______	+1.54	971409	1496959	protein folding	peptidyl-prolyl cis-trans isomerase
YDR524C	AGE1______	+1.06	317637	337447	secretion	GTPase activating protein for ARFs
YFL019C	__________	+1.02	131847	134054	unknown	unknown
YGL217C	__________	-1.14	146527	128296	unknown	unknown; similar to mouse kinesin-related protein KIF3
YHL021C	__________	+1.30	219555	285130	unknown	unknown
YIL115C	NUP159____	+1.18	614538	727633	nuclear protein targeting	nuclear pore protein
YJL218W	__________	-1.05	184356	176258	unknown	unknown; similar to E. coli galactoside O-acetyltransferase
YKL214C	__________	-1.07	372221	348654	unknown	unknown
YLR148W	PEP3______	-1.01	274289	270711	vacuole biogenesis	vacuolar membrane protein
YML022W	APT1______	-1.52	1501334	987976	purine biosynthesis	adenine phosphoribosyltransferase
YMR251W	__________	+1.17	132388	154616	unknown	unknown
YNL307C	MCK1______	-1.04	601546	578105	meiosis	protein kinase
YOR047C	STD1______	+1.07	510151	546915	glucose repression	modulator of glucose repression
YPL025C	__________	-2.03	340903	167725	unknown	unknown
YPR120C	CLB5______	+1.02	202241	206942	cell cycle	G1/S cyclin
YBR096W	__________	+1.26	651741	818736	unknown	unknown
YCR033W	__________	+1.11	120787	134533	unknown	unknown
YDL215C	GDH2______	+1.01	141994	143513	glutamate metabolism	NAD-dependent glutamate dehydrogenase
YDR334W	SWR1______	-1.01	264408	261379	RNA processing (putative)	RNA helicase (putative)
YER037W	__________	+2.00	148416	297015	unknown	unknown
YGL025C	PGD1______	-1.04	924421	891264	transcription	RNA polymerase II mediator subunit
YGR136W	__________	+1.44	749473	1076101	unknown	unknown
YHR149C	__________	-1.08	240155	223309	unknown	unknown
YJL025W	RRN7______	-1.14	232480	203757	transcription	component of rDNA transcription factor
YKL024C	URA6______	-1.09	1115862	1024126	pyrimidine metabolism	uridine-monophosphate kinase
YLL025W	__________	+1.23	306288	375454	unknown	unknown; similar to Pau3p and members of the PAU1 family
YLR330W	CHS5______	+1.31	745111	972754	cell wall biogenesis	unknown
YMR067C	__________	+1.09	340679	372146	unknown	unknown
YNL117W	MLS1______	-1.03	145546	141923	glyoxylate cycle	malate synthase
YOL025W	LAG2______	-1.03	164885	159506	aging	unknown
YOR235W	__________	-1.01	177245	175586	unknown	unknown
YPL214C	THI6______	+1.21	329431	400240	thiamine biosynthesis	TMP pyrophosphorylase, hydroxyethylthiazole kinase
YER186C	__________	+1.00	498911	499157	unknown	unknown
YBL035C	POL12_____	+1.00	131049	131492	DNA replication	DNA polymerase alpha, 70 kD subunit
YBR298C	MAL31_____	+1.05	99010	104434	transport	maltose permease
YDL037C	__________	-1.13	105998	93928	unknown	similar to glucan 1,4-alpha-glucosidase
YDR167W	TAF25_____	-1.11	518229	465816	transcription	TFIID 23 kD subunit
YDR536W	STL1______	-1.03	145751	140975	transport	hexose transporter (putative)
YFL030W	__________	+1.26	150093	188436	unknown	unknown; similar to Methanobacterium aspartate transaminase
YGL228W	SHE10_____	+1.13	441561	499862	unknown	causes lethality when overexpressed
YHL032C	GUT1______	+1.07	238968	254805	glycerol utilization	glycerol kinase
YIL127C	__________	-1.56	677611	434081	unknown	unknown
YJR006W	HYS2______	+1.00	377520	378167	DNA replication	polymerase delta 55 KD subunit
YKR001C	VPS1______	+1.09	587533	639793	vacuolar protein targeting	GTPase, dynamin family
YLR158C	ASP3-3____	+23.62	141684	3346303	asparagine utilization	L-asparaginase II
YML033W	__________	+1.29	282201	362720
YMR262W	__________	-1.06	391642	368750	unknown	unknown
YNL319W	__________	-1.04	346073	332969	unknown	unknown
YOR059C	__________	+1.01	584653	590312	unknown	unknown
YPL037C	EGD1______	+1.03	6625120	6820351	transcription	regulator of pol II transcribed genes; enhances Gal4 DNA binding
YPR132W	RPS23B____	+1.28	15710343	20091648	protein synthesis	ribosomal protein S23B
YBR108W	__________	+1.31	224893	295557	unknown	unknown; similar to wheat glutenin, secalin
YCR045C	__________	-1.00	127835	127438	unknown	unknown; similar to protease B (Prb1p) and subtilisin family
YDL227C	HO________	+1.03	85484	87785	mating type switching	homothallic switching endonuclease
YDR346C	__________	-1.72	1075896	625313	unknown	unknown
YGL037C	PNC1______	+5.67	282860	1604147	pyridine nucleotide cycle	pyrazinamidase and nicotinamidase
YGR148C	RPL24B____	+1.02	15812855	16096719	protein synthesis	ribosomal protein L24B
YHR161C	YAP1801___	-1.02	1175276	1148548	endocytosis and secretion	clathrin assembly protein
YJL037W	__________	-1.16	248916	214552	unknown	unknown
YKL035W	UGP1______	+1.42	450374	641409	pyrimidine metabolism	UGP1, UDP-glucose pyrophosphorylase
YLL037W	__________	-1.20	592427	493461	unknown	unknown; similar to human platelet-activating factor
YLR342W	FKS1______	+1.35	1771440	2387881	cell wall biogenesis	1,3-beta-D-glucan synthase subunit
YMR078C	CTF18_____	-1.05	226022	214430	mitosis, chromosome transmission	unknown
YNL129W	__________	+1.05	171286	179435	unknown	unknown
YOL037C	__________	-1.08	282712	260858	unknown	unknown
YOR247W	SRL1______	+1.79	3592658	6438276	unknown	unknown; similar to Svs1p; suppressor of Rad53 lethality
YPL226W	NEW1______	-1.28	959329	746768	unknown	unknown; similar to members of the ATP-binding cassette (AC); prion
YHR218W	__________	-1.09	214474	196548	unknown	unknown; similar to other subtelomerically-encoded proteins
YBL047C	__________	-1.04	139968	134333	unknown	unknown; similar to Uso1p, Pan1p, and mouse eps15
YDL049C	KNH1______	+1.27	100688	127484	cell wall biogenesis	Kre9p homolog
YDR177W	UBC1______	+1.18	749774	885860	protein degradation, ubiquitin-mediated	E2 ub.-conjugating enzyme
YFL040W	__________	+1.08	130100	141064	unknown	unknown; similar to members of the sugar transport family
YGL240W	DOC1______	+1.07	184455	196778	cell cycle	anaphase-promoting complex subunit
YHL044W	__________	+1.05	139979	146920	unknown	unknown; similar to subtelomerically-encoded proteins
YIL139C	REV7______	+1.18	276455	327522	DNA repair	DNA polymerase zeta

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YJR017C	ESS1______	+1.06	517926	550922	protein folding	peptidyl-prolyl cis/trans isomerase
YKR013W	PRY2______	+1.33	1353077	1801551	unknown	unknown; similar to plant PR-pathogen related proteins
YLR170C	APS1______	+1.19	345957	411582	secretion	AP-1 complex subunit
YML043C	RRN11_____	+1.01	263013	266229	transcription	component of rDNA transcription factor
YMR274C	RCE1______	+1.06	232869	246172	protein processing	protease, acts on Ras and a-factor C-termini
YNL331C	AAD14_____	+1.02	345797	354396	unknown	hypothetical aryl-alcohol dehydrogenase
YOR071C	__________	-1.04	291215	279153	transport	thiamine transporter (putative)
YPL049C	DIG1______	-1.10	698450	634106	invasive growth	MAP kinase-associated protein
YPR142C	__________	-1.34	483618	361542	unknown	unknown
YBR119W	MUD1______	+1.08	267753	288016	mRNA splicing	U1 snRNP A protein
YCR057C	PWP2______	-1.57	221044	140588	cytoskeleton (putative)	unknown
YDL239C	__________	-1.01	132766	131781	unknown	unknown
YDR358W	GGA1______	+1.16	148862	172080	secretion (putative)	unknown; binds ARF
YER057C	HIG1______	+1.49	780443	1160123	heat shock response	heat-induced protein
YGL049C	TIF4632___	-1.02	181966	178823	protein synthesis	mRNA cap-binding protein (eIF-4F) subunit
YGR160W	__________	-1.66	839142	504059	unknown	unknown
YHR173C	__________	+1.12	220541	245908	unknown	unknown
YJL050W	MTR4______	-1.88	773331	410729	mRNA export	RNA helicase
YKL047W	__________	-1.03	266089	257944	unknown	unknown
YLL049W	__________	+1.33	423419	564024	unknown	unknown
YLR354C	TAL1______	+1.30	2045678	2656342	pentose phosphate cycle	transaldolase
YMR089C	YTA12_____	-1.01	161861	160046	protein folding	mitochondrial chaperonin
YNL141W	AAH1______	-1.57	978877	623450	purine metabolism	adenine deaminase
YOL049W	GSH2______	+1.16	896437	1040839	glutathione biosynthesis	glutathione synthetase
YOR259C	RPT4______	+1.39	506125	703126	protein degradation	26S proteasome regulatory subunit
YPL238C	__________	-1.23	313675	255625	unknown	unknown
YJR160C	__________	+1.01	115685	117149	unknown	unknown; similar to maltose permeases (maltose/H+
YBL059W	__________	+1.04	199785	207170	unknown	unknown
YDL061C	RPS29B____	-1.24	8066973	6482694	protein synthesis	ribosomal protein S29B
YDR188W	CCT6______	-1.15	1397629	1211387	protein folding	cytoplasmic chaperonin complex
YFL052W	__________	-1.15	155669	134946	unknown	unknown; similar to MAL regulatory proteins
YGL252C	RTG2______	-1.11	581795	525484	interorganelle communication	unknown
YHR004C	NEM1______	+1.05	244284	255532	nuclear organization and biogenesis	phosphatase
YIL151C	__________	-1.06	741595	701673	unknown	unknown; similar to mitochondrial aldehyde dehydrogenase
YJR028W	__________	+1.25	3210692	4000828	transposition	TyA gag protein
YKR025W	RPC37_____	-1.34	869307	648790	transcription	RNA polymerase III 37 kDa subunit
YLR182W	SWI6______	-1.24	301331	242420	cell cycle	transcription factor
YML053C	__________	+1.21	308611	374059	unknown	unknown
YNR004W	__________	+1.09	179868	196042	unknown	unknown; similar to bovine interferon gamma precursor
YOR083W	__________	-1.21	181900	150453	unknown	unknown
YPR154W	__________	-1.00	105276	105119	unknown	unknown; similar to several SH3 domain-containing proteins
YBR131W	CCZ1______	+1.01	140182	141798	calcium, caffeine, and zinc sensitivity	unknown
YDR003W	__________	+1.14	124933	141989	unknown	unknown; similar to Ybr005p
YDR368W	YPR1______	+1.62	659629	1066405	unknown	unknown; similar to aldo-keto reductases
YER067W	__________	+1.33	163454	216815	unknown	unknown
YGL061C	DUO1______	-1.10	227556	207061	mitosis	unknown; spindle protein
YGR168C	__________	+1.22	169349	206573	unknown	unknown; similar to human vasoactive intestinal peptide
YHR185C	ADY1______	-1.05	106133	101517	meiosis (putative)	unknown
YJL062W	LAS21_____	-1.12	354695	315303	unknown	major facilitator superfamily
YKL059C	__________	-1.03	221243	215028	unknown	unknown; similar to members of the chaperonin-containing
YLL061W	MMP1______	-1.79	773323	432151	transport, amino acid	high affinity S-methylmethionine permease
YLR366W	__________	+1.05	99395	104534	unknown	unknown
YMR101C	SRT1______	+1.02	122668	125242	protein glycosylation	cis-prenytransferase (putative)
YNL153C	GIM3______	+1.03	618082	635241	protein folding	prefoldin subunit 4
YOL059W	GPD2______	+1.16	586122	682294	glycerol metabolism	glycerol-3-phosphate dehydrogenase
YOR271C	__________	-1.30	1024007	789338	unknown	unknown; similar to rat tricarboxylate carrier
YBL071C	__________	-1.26	305761	241989	unknown	unknown
YDL073W	__________	-1.03	135026	130985	unknown	unknown
YDR200C	__________	+1.01	204240	206542	unknown	unknown
YFL064C	__________	-1.17	209204	178222	unknown	unknown; similar to other subtelomerically-encoded proteins
YGR001C	__________	-1.53	878921	573744	unknown	unknown
YHR015W	MIP6______	-1.18	151717	128846	mRNA export, putative	RNA-binding protein
YIL162W	SUC2______	-1.11	434080	392086	sucrose utilization	invertase
YJR040W	GEF1______	-1.07	426401	396907	transport	CLC chloride channel, iron transporter
YKR037C	SPC34_____	+1.02	278988	284478	cytoskeleton	spindle pole body component
YLR194C	__________	+6.10	745390	4544096	unknown	unknown
YML064C	TEM1______	+1.09	351816	383052	cell cycle	GTP-binding protein, RAS superfamily
YMR296C	LCB1______	+1.01	805674	817228	sphinogolipid metabolism	serine palmitoyltransferase component
YNR016C	ACC1______	+1.14	138170	156912	fatty acid metabolism	acetyl-CoA carboxylase
YOR095C	RKI1______	-1.89	1279558	678416	pentose phosphate cycle	ribose-5-phosphate ketol-isomerase
YPL071C	__________	+1.31	314561	412333	unknown	unknown
YPR162C	ORC4______	-1.13	261531	232263	DNA replication	origin recognition complex 56 kD subunit
YBR143C	SUP45_____	-1.24	868314	698607	protein synthesis	translation release factor eRF1 subunit
YCR081W	SRB8______	-1.14	120387	105782	transcription	RNA polymerase II mediator subunit
YDR015C	__________	-1.04	107348	103102	unknown	unknown
YDR380W	__________	+1.37	222204	303709	unknown	unknown; similar to pyruvate decarboxylase, pyruvate
YER077C	__________	+1.28	207671	264809	unknown	unknown; similar to class I tRNA synthetases
YGL073W	HSF1______	+1.15	140921	162506	heat shock	transcription factor
YGR180C	RNR4______	+1.75	877073	1535970	DNA replication	ribonucleotide reductase
YHR197W	__________	-1.62	510297	314869	unknown	unknown
YJL074C	SMC3______	-1.00	232586	232510	chromatin structure	cohesin
YKL071W	__________	-1.02	200345	196782	unknown	unknown
YLR006C	SSK1______	+1.11	227147	251024	signaling	two-component pathway
YLR378C	SEC61_____	+1.19	1278215	1516595	secretion	ER protein translocation complex subunit
YMR113W	FOL3______	+1.01	316084	317749	folate metabolism	dihydrofolate synthetase
YNL165W	__________	+1.08	304490	329996	unknown	unknown
YOL071W	__________	+1.36	259262	353412	unknown	unknown
YOR283W	__________	+1.38	645900	889826	unknown	unknown; similar to phosphoglycerate mutases
YPL259C	APM1______	+1.30	354387	460192	secretion	AP-1 complex subunit
YBL083C	__________	-1.11	325992	294830	unknown	unknown
YDL085W	__________	+1.06	139323	147891	unknown	unknown; similar to NADH dehydrogenase (ubiquinone)
YFR008W	__________	-1.02	600580	586167	unknown	unknown
YGR013W	SNU71_____	-1.04	186351	179664	mRNA splicing	U1 snRNP protein
YHR026W	PPA1______	-1.13	3192932	2830332	vacuolar acidification	vacuolar H+-ATPase proteolipid protein
YIL173W	VTH1______	+1.05	326596	343022	vacuolar protein targeting	unknown; similar to Vps10p
YJR052W	RAD7______	+1.15	288309	331578	DNA repair, nucleotide excision	NEF4 component
YKR049C	__________	+1.88	223472	419502	unknown	unknown
YLR206W	ENT2______	+1.06	96680	102543	endocytosis (putative)	unknown; epsin homolog
YML076C	__________	+1.11	170542	189408	unknown	unknown; similar to transcription factors, has Zn[2]-Cys[6]
YNR028W	CPR8______	-1.04	392282	375734	protein folding	peptidyl-prolyl cis-trans isomerase

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YOR107W	RGS2______	+1.24	226589	280810	signaling	GTPase-activating protein (GAP) for Gpa2p
YPL083C	SEN54_____	+1.17	456205	532626	tRNA splicing	splicing endonuclease subunit
YPR174C	__________	-1.19	157906	132897	unknown	unknown; similar to C. elegans nuclear lamin
YBR155W	CNS1______	-1.70	730958	430613	unknown	unknown; similar to Sti1p; suppresses cyclophilin mutant
YCR092C	MSH3______	-1.12	251528	224279	DNA repair, mismatch	MutS homolog
YDR027C	LUV1______	-1.12	540058	480677	vacuole biogenesis (putative)	unknown
YDR392W	SPT3______	-1.01	340966	339083	chromatin structure	histone acetyltransferase complex subunit
YER088C	DOT6______	+1.17	388028	452353	silencing (telomere)	nuclear protein with Myb DNA-binding domain
YGL085W	__________	-1.02	254262	249756	unknown	unknown; similar to Staphylococcus hyicus thermonuclease
YGR192C	TDH3______	+1.32	15927761	20970230	glycolysis	glyceraldehyde-3-phosphate dehydrogenase 3
YHR209W	__________	+1.35	4273996	5777297	unknown	unknown; similar to Yer175p
YJL086C	__________	+1.05	241329	252257	unknown	unknown
YKL083W	__________	+1.08	236732	254679	unknown	unknown
YLR018C	POM34_____	+1.02	609825	621092	nuclear protein targeting	nuclear pore protein
YLR390W	ECM19_____	+1.14	248489	283495	cell wall biogenesis	unknown
YMR124W	__________	+1.26	695557	873531	unknown	unknown
YNL177C	__________	+1.15	532123	613360	unknown	unknown
YOL083W	__________	+1.08	162989	176236	unknown	unknown
YOR295W	__________	+1.30	326092	424456	unknown	unknown
YPL271W	ATP15_____	+1.82	510023	927124	ATP synthesis	F1-ATP synthase epsilon subunit
YAL002W	VPS8______	+1.12	234551	263364	vacuolar protein targeting	unknown
YBR167C	POP7______	+1.05	217006	228709	rRNA and tRNA processing	RNase P and RNase MRP subunit
YCR104W	PAU3______	+1.15	198468	228911	unknown	unknown; similar to bovine alcohol dehydrogenase
YDR038C	ENA5______	+1.02	360590	369330	transport	Na(+) ATPase
YDR405W	MRP20_____	+1.02	241742	247169	protein synthesis	ribosomal protein, mitochondrial L23
YER100W	UBC6______	+1.06	576842	612888	protein degradation, ubiquitin-mediated	ubiquitin-conjugating enzyme
YGL098W	__________	-1.08	237117	218676	unknown	unknown
YGR205W	__________	+1.13	154900	174493	unknown	unknown; similar to E. coli putrescine transport protein
YIL002C	INP51_____	+1.18	258675	304858	phosphatidylinositol metabolism	phosphatidylinositol 4,5-bisphosphate 5-phosphatase
YJL099W	CHS6______	+1.19	182022	216296	cell wall biogenesis	chitin biosynthesis
YKL096W	CWP1______	+3.87	1750592	6776754	cell wall protein	beta-1,6-glucan acceptor
YLR031W	__________	+1.31	125681	164976	unknown	unknown
YLR403W	SFP1______	-1.07	200984	188098	unknown	overexpression inhibits nuclear protein localization
YMR136W	GAT2______	+1.16	202457	235216	transcription (putative)	transcription factor (putative_; GATA zinc finger protein
YNL190W	__________	+1.13	2513462	2831721	unknown	unknown
YOL096C	COQ3______	+1.11	212474	236121	ubiquinone biosynthesis	3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase
YOR306C	__________	+1.90	355978	677166	unknown	unknown; similar to human X-linked PEST-containing
YPR001W	CIT3______	-1.08	135964	126064	TCA cycle	citrate synthase
YBL096C	__________	-1.07	128889	120653	unknown	unknown
YDL098C	SNU23_____	-1.01	236425	233880	mRNA splicing (putative)	U4/U6.U5 snRNP protein
YDR221W	__________	-1.08	180082	167483	unknown	unknown; similar to the beta subunit of human glucosidase
YEL002C	WBP1______	+1.13	271305	305913	protein glycosylation	oligosaccharyltransferase complex subunit
YFR021W	__________	-1.04	186568	178881	unknown	unknown
YGR026W	__________	+1.32	568485	749368	unknown	unknown
YHR039C	VMA10_____	+1.14	2120402	2411643	vacuolar acidification	vacuolar H-ATPase 13 kDa subunit
YIR009W	MSL1______	+1.10	205584	225198	mRNA splicing	U2 snRNP protein
YJR065C	ARP3______	+1.35	968253	1304378	cytoskeleton	actin-related protein
YKR062W	TFA2______	+1.08	379205	407702	transcription	TFIIE 43 kD subunit
YLR219W	__________	+1.04	174764	182289	unknown	unknown
YML089C	__________	-1.00	111935	111622	unknown	unknown
YNL002C	RLP7______	-1.46	1118905	765142	protein synthesis	ribosomal protein L7 (putative)
YNR041C	COQ2______	-1.28	385950	301558	ubiquinone biosynthesis	para-hydroxybenzoate polyprenyltransferase
YOR120W	GCY1______	+1.43	227382	325493	unknown	unknown; similar to mammalian aldo-keto reductases
YPL096W	PNG1______	+1.01	283974	287045	protein modification	peptide:N-glycanase
YPR187W	RPO26_____	-1.18	2668585	2270968	transcription	Shared subunit of RNA polymerases I, II, and III
YAL015C	NTG1______	-1.29	226602	175480	DNA repair	DNA glycosylase
YBR179C	FZO1______	-1.05	264500	251032	mitochondrial biogenesis	mitochondrial membrane GTPase
YCRX09C	__________	-1.41	305528	216111
YDR050C	TPI1______	+1.27	15881893	20208030	glycolysis	triosephosphate isomerase
YDR417C	__________	-1.20	8959390	7441181	unknown	unknown
YER112W	LSM4______	+1.05	632261	661022	mRNA splicing	U6 snRNP protein
YGL110C	__________	-1.21	429519	355222	unknown	unknown
YGR217W	CCH1______	+1.01	303623	306104	transport	(putative) Ca(2+) channel protein
YJL111W	CCT7______	-1.27	1349772	1061940	protein folding	cytoplasmic chaperonin complex
YKL107W	__________	+1.11	123445	137619	unknown	unknown
YLR041W	__________	-1.09	328641	300407	unknown	unknown
YLR413W	__________	-2.25	1185663	527306	unknown	unknown
YMR148W	__________	+1.08	229980	248676	unknown	unknown
YNL202W	SPS19_____	-1.21	143170	118092	sporulation	peroxisomal 2,4-dienoyl-CoA reductase
YOL106W	__________	-2.25	7918691	3522444	unknown	unknown
YOR318C	__________	-1.51	204129	134865	unknown	unknown
YPR013C	__________	-1.01	250763	247975	unknown	unknown; similar to mouse REX1 encoded transcription factor
YBL106C	SRO77_____	+1.03	123200	127045	secretion (putative)	unknown; homolog of Drosophila tumor suppressor l(2)gl
YCL013W	__________	+1.04	121257	126123
YDL110C	__________	+2.09	295033	615681	unknown	unknown
YDR233C	__________	-1.00	2184168	2174600	unknown	unknown
YEL014C	__________	-1.05	260437	247239	unknown	unknown
YFR032C	__________	-1.01	131169	130358	unknown	unknown
YGR036C	CAX4______	-1.02	160544	157308	cell wall biogenesis	unknown
YIR020C	__________	-1.10	170517	155377	unknown	unknown
YJR077C	MIR1______	+1.41	1152412	1628183	transport	mitochondrial phosphate transporter
YKR074W	__________	-1.03	603681	584288	unknown	unknown
YLR229C	CDC42_____	-1.08	1100572	1015073	signaling, filamentous or polarized growth	GTPase, Rho subfamily
YNL014W	__________	-1.46	721211	493065	unknown	unknown; similar to translation elongation factor Yef3p,
YNR053C	__________	-1.38	1171948	850893	unknown	unknown; similar to human breast tumor-associated
YOR132W	VPS17_____	+1.05	347965	365272	vacuolar protein targeting	peripheral membrane protein
YPL108W	__________	-1.06	262863	247527	unknown	unknown
YPR199C	ARR1______	+1.35	301992	407596	transcription	basic leu zipper transcription factor
YAL027W	__________	-1.17	337948	289301	unknown	unknown
YBR191W	RPL21A____	-1.21	12133153	10005008	protein synthesis	ribosomal protein L21A
YCRX21C	__________	-1.09	311316	286399
YDR062W	LCB2______	-1.07	414440	387212	sphingolipid biosynthesis	serine C-palmitoyltransferase subunit
YDR429C	TIF35_____	-1.40	2154510	1535225	protein synthesis	translation initiation factor eIF3 subunit
YER123W	YCK3______	-1.48	407115	274558	cell proliferation	plasma membrane-bound casein kinase I
YGL122C	NAB2______	-1.08	108635	101051	mRNA processing	poly(A)+RNA binding protein
YGR229C	SMI1______	+1.06	471616	499904	cell wall biogenesis	may regulate glucan and chitin synthesis
YIL025C	__________	-1.06	169778	159967	unknown	unknown
YJL123C	__________	-1.01	316843	312598	unknown	unknown
YKL119C	VPH2______	-1.08	255678	237093	vacuolar acidification	vacuolar H+-ATPase assembly protein
YLR053C	__________	+1.05	125145	131189	unknown	unknown; similar to xylose isomerase

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YNL214W	PEX17_____	+1.07	165947	177511	peroxisome biogenesis	peripheral membrane protein
YOL118C	__________	-1.04	144077	137997	unknown	unknown
YOR330C	MIP1______	-1.21	368939	304293	DNA replication	mitochondrial DNA polymerase catalytic subunit
YPR025C	CCL1______	-1.08	311747	289836	transcription	TFIIH subunit
YBR005W	__________	+1.41	249563	352995	unknown	unknown
YCL026C	FRM2______	-1.02	98959	97385	signaling, fatty acid-mediated	unknown
YDL122W	UBP1______	-1.04	199133	192208	protein degradation, ubiquitin-mediated	ubiquitin-specific protease
YEL025C	SRI1______	+1.02	284199	288563	unknown	unknown; interacts with SWI/SNF and RSC
YFR042W	__________	+1.18	229589	271821	unknown	unknown
YGR043C	__________	+2.05	113212	231763	unknown	unknown; similar to Tal1p
YHR060W	VMA22_____	+1.10	391540	430004	vacuolar acidification	vacuolar H+-ATPase assembly protein
YIR030C	DCG1______	+1.04	149879	155898	unknown	may be involved in catabolite repression
YJR090C	GRR1______	+1.01	189910	191946	glucose repression (and cell cycle)	cyclin F box protein
YKR086W	PRP16_____	-1.07	503426	468426	mRNA splicing	RNA helicase
YLR241W	__________	-1.01	215488	212587	unknown	major facilitator superfamily
YML110C	COQ5______	+1.21	728210	882115	ubiquinone biosynthesis	methyltransferase
YNL026W	__________	+1.10	139342	153128	unknown	unknown
YNR065C	__________	+1.37	207638	285033	unknown	unknown; similar to Pep1p
YPL120W	VPS30_____	+1.04	202808	210386	vacuolar protein targeting	unknown?
YAL036C	FUN11_____	-1.29	380362	295140	unknown	unknown; similar to Xenopus laevis GTP-binding protein DRG
YBR203W	__________	+1.08	90049	96861	unknown	unknown
YDR074W	TPS2______	+1.46	201475	294425	trehalose metabolism	trehalose-6-phosphate phosphatase
YDR441C	APT2______	+1.04	400651	418063	purine metabolism	unknown; similar to adenine phosphoribosyltransferase
YER135C	__________	-1.01	92989	91982	unknown	unknown
YGL134W	PCL10_____	+1.02	218543	223286	cell cycle	cyclin (Pho85p)
YGR241C	YAP1802___	-1.02	257349	252608	endocytosis and secretion	clathrin assembly protein
YIL037C	__________	+1.11	137605	153098	unknown	unknown
YJL135W	__________	-1.02	95600	93749	unknown	unknown
YKL131W	__________	+1.01	97909	99040	unknown	unknown
YLR065C	__________	-1.11	696386	628295	unknown	unknown
YLR435W	__________	-1.62	896729	554383	unknown	unknown
YMR170C	ALD2______	+1.46	198556	290489	ethanol utilization	aldehyde dehydrogenase
YNL226W	__________	-1.05	115403	110132	unknown	unknown
YOL130W	ALR1______	-1.19	171050	144159	aluminum resistance	ion transporter, putative
YOR342C	__________	+1.08	550049	596748	unknown	unknown
YPR037C	__________	+1.20	567279	681807	unknown	unknown; similar to Erv1p and rat ALR protein
YBR015C	MNN2______	+1.06	496504	526774	protein glycosylation	Golgi alpha-1,2-mannosyltransferase (putative)
YCL038C	__________	+1.05	93423	97995	unknown	unknown
YDR257C	RMS1______	-1.26	319445	252998	transcription	(putative) transcriptional regulator
YEL037C	RAD23_____	-1.11	582198	522294	DNA repair, nucleotide excision	ubiquitin-like protein
YFR054C	__________	+1.03	105618	109204	unknown	unknown
YGR055W	MUP1______	+1.33	562537	745424	transport	methionine permease
YIR042C	__________	-1.30	157272	121378	unknown	unknown
YJR101W	__________	-1.01	121743	120933	unknown	unknown; similar to superoxide dismutase
YKR098C	UBP11_____	+1.25	161321	201869	protein degradation, ubiquitin-mediated	ubiquitin-specific protease
YLR253W	__________	-1.05	208646	197855	unknown	unknown; similar to Abc1p
YML121W	GTR1______	+1.29	407669	524263	phosphate transport	GTP-binding protein
YNL036W	NCE103____	+2.16	292305	630812	secretion, non-classical	unknown
YNR077C	__________	+1.04	88339	92055	unknown	unknown
YOR154W	__________	-1.16	238980	206486	unknown	unknown
YPL132W	COX11_____	+1.01	243232	245547	respiration	cytochrome-c oxidase assembly
YAL047C	SPC72_____	-1.09	192419	176342	cytoskeleton	spindle pole body component
YBR215W	HPC2______	-1.12	130744	117228	transcription	regulator of histone transcription
YDR086C	SSS1______	+1.15	1288221	1481206	secretion	ER protein translocation complex subunit
YDR453C	__________	+1.08	257760	278762	unknown	unknown; similar to Tsa1p
YER145C	FTR1______	-1.97	1112032	564107	transport	iron permease
YGL146C	__________	+1.03	122359	126124	unknown	unknown; similar to Bunyamwera virus RNA-directed RNA
YGR253C	PUP2______	+1.15	1340347	1535130	protein degradation	20S proteasome subunit(alpha5)
YIL049W	DFG10_____	+1.14	269139	306128	filamentous growth	unknown
YJL147C	__________	+1.08	216050	234119	unknown	unknown
YKL143W	LTV1______	-2.11	898697	425824	unknown	unknown; required for viability at low temperature
YLR077W	__________	+1.03	155922	161223	unknown	unknown
YLR447C	VMA6______	+1.12	2288244	2559130	vacuolar acidification	vacuolar H+-ATPase V0 domain 36 KD subunit
YMR180C	CTL1______	+1.36	225882	306776	unknown	RNA triphosphatase
YNL238W	KEX2______	+1.07	97395	104523	secretion	late Golgi endoproteinase
YOL142W	RRP40_____	-1.17	626835	536380	rRNA processing	exosome complex component
YOR352W	__________	+1.06	237501	250729	unknown	unknown
YPR049C	__________	-1.12	464981	415576	unknown	unknown
YBR027C	__________	+1.04	124768	129573	unknown	unknown
YCL050C	APA1______	-1.09	383671	352050	purine metabolism	ATP adenylyltransferase I
YDL144C	__________	+1.07	369946	395234	unknown	unknown
YDR265W	PEX10_____	+1.11	142362	158444	peroxisome biogenesis	integral membrane protein
YEL049W	PAU2______	+1.34	216924	290948	unknown	unknown; similar to members of the Srp1p/Tip1p family
YGR067C	__________	+1.06	109639	116457	unknown	unknown
YHR081W	__________	-1.47	757344	513869	unknown	unknown
YJR113C	__________	-1.06	462705	436052	protein synthesis	ribosomal protein, mitochondrial S7 (putative)
YLR262C	YPT6______	+1.13	367009	416266	secretion	GTP-binding protein, rab family
YNL048W	ALG11_____	-1.07	296744	277144	protein glycosylation	unknown
YOR166C	__________	+1.04	237860	247970	unknown	unknown
YPL144W	__________	+1.21	130446	157296	unknown	unknown
YAL061W	__________	-1.07	139496	130668	unknown	unknown; similar to alcohol/sorbitol dehydrogenase
YBR227C	MCX1______	-1.11	211293	190976	protein folding	chaperone, mitochondrial (putative)
YDR098C	GRX3______	-1.06	927034	873134	oxidative stress response	glutaredoxin
YDR465C	RMT2______	-1.63	397259	243253	arginine metabolism	arginine methyltransferase
YER155C	BEM2______	+1.03	90794	93908	bud emergence	GTPase-activating protein for Rho1p
YGL158W	RCK1______	+1.06	110313	117108	unknown	protein kinase
YGR265W	__________	+1.01	250832	252259	unknown	unknown
YIL061C	SNP1______	+1.01	241639	244288	mRNA splicing	U1 snRNP protein
YJL159W	HSP150____	+1.71	11208963	19172435	heat shock response	secreted glycoprotein of HSP family
YKL155C	__________	+1.25	452474	565443	unknown	unknown
YLR089C	__________	-1.31	600035	458001	unknown	unknown; similar to alanine aminotransferase
YLR459W	CDC91_____	+1.18	137878	162148	unknown	unknown; major facilitator superfamily
YMR192W	__________	+1.18	182891	215727	unknown	unknown; similar to mouse Tbc1 protein
YNL250W	RAD50_____	+1.25	122503	152771	DNA repair	DNA binding protein
YOL154W	__________	+1.01	208411	210149	unknown	unknown; similar to Sartorya fumigata Asp FII
YOR364W	__________	-1.02	120133	117677	unknown	unknown
YPR061C	__________	+1.14	142343	161869	unknown	unknown; similar to E. coli DnaJ and other DnaJ-like
YBR039W	ATP3______	+1.66	1194487	1982463	ATP synthesis	mitochondrial F1F0 ATP synthase subunit
YCL062W	__________	+1.12	216444	242644
YDL156W	__________	-1.03	111997	108401	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YDR277C	MTH1______	+1.25	131038	163929	hexose transport	transcriptional repressor
YEL060C	PRB1______	+1.87	219583	411468	protein degradation	vacuolar protease B
YGR079W	__________	-1.05	567587	540879	unknown	unknown
YHR093W	AHT1______	-1.04	129770	125317	unknown	unknown
YJR125C	ENT3______	+1.07	728525	780428	endocytosis (putative)	unknown; epsin homolog
YLR273C	PIG1______	-1.08	130723	120882	glucose repression	(putative) Glc7p regulatory subunit
YMR012W	CLU1______	-1.19	1523718	1285731	protein synthesis	translation initiation factor eIF3 subunit
YNL058C	__________	+1.92	666884	1282398	unknown	unknown
YOR178C	GAC1______	-1.09	184511	168526	glycogen metabolism	Glc7p regulatory subunit
YPL156C	__________	+1.17	367231	430278	unknown	unknown
YAR007C	RFA1______	+1.05	175498	183408	DNA replication	replication factor A, 69 kD subunit
YBR239C	__________	-1.19	220181	185398	unknown	unknown; similar to transcription factors, has Zn[2]-Cys[6]
YDR108W	GSG1______	-1.03	192508	187357	meiosis	unknown
YDR477W	SNF1______	-1.18	352399	297849	glucose derepression	protein kinase
YER165W	PAB1______	-1.13	2580637	2284927	mRNA 3'-end processing	cleavage/polyadenylation factor CF IA component
YGL170C	__________	-1.23	199864	162100	unknown	unknown; similar to phosphoribulokinase precursor
YGR277C	__________	-1.06	396606	375322	unknown	unknown; similar to Ctr1p
YIL071C	__________	+1.07	206080	220762	unknown	unknown
YJL171C	__________	+1.99	245143	488073	unknown	unknown
YKL167C	MRP49_____	-1.03	315562	306524	protein synthesis	ribosomal protein, mitochondrial large subunit
YLR101C	__________	-1.28	1559772	1221605	unknown	unknown
YMR203W	TOM40_____	+1.00	763821	767618	mitochondrial protein targeting	outer membrane translocase component
YNL262W	POL2______	+1.01	117789	118901	DNA replication	polymerase epsilon catalytic subunit
YOL166C	__________	-1.07	129921	120892	unknown	unknown
YOR376W	__________	-1.04	117170	112522	unknown	unknown; similar to Na+/K+-exchanging ATPases
YPR073C	LTP1______	+1.13	645813	731432	unknown	protein phosphatase
YBR051W	__________	-1.06	106785	100564	unknown	unknown
YCLX01W	__________	-1.31	430961	328993
YDL168W	SFA1______	-1.07	710494	666349	formaldehyde metabolism	long-chain alcohol dehydrogenase
YDR289C	RTT103____	-1.11	287900	258318	transposition (putative)	unknown; similar to Spt8p
YEL072W	__________	+1.08	150179	162443	unknown	unknown
YGR091W	PRP31_____	-1.09	196505	180182	mRNA splicing	U4/U6, U5 snRNP protein
YHR105W	__________	-1.28	148030	115690	unknown	unknown; similar to Grd19p and bacterial helix-turn-helix
YJR137C	ECM17_____	+1.00	139232	139681	cell wall biogenesis	unknown
YLR285W	__________	-1.01	609525	603435	unknown	unknown
YMR024W	MRPL3_____	+1.07	297624	318322	protein synthesis	ribosomal protein, mitochondrial L3
YNL070W	TOM7______	+1.18	270204	319237	mitochondrial protein targeting	small subunit of translocase
YOR190W	SPR1______	+1.01	190785	191786	sporulation	exo-1,3-beta-glucanase
YPL168W	__________	+1.13	174021	196940	unknown	unknown
YAR029W	__________	+1.20	99243	118729	unknown	unknown; similar to subtelomerically-encoded proteins
YBR251W	MRPS5_____	-1.02	339287	333891	protein synthesis	ribosomal protein, mitochondrial S5
YDR120C	TRM1______	-1.81	574229	316472	tRNA processing	tRNA methyltransferase
YDR489W	__________	+1.03	189316	195502	unknown	unknown
YER175C	__________	+1.09	152723	165792	unknown	unknown; similar to Yhr209p
YGL182C	__________	-1.00	103450	103333	unknown	unknown
YGR289C	MAL11_____	-1.16	147068	126775	transport	alpha-glucoside permease
YJL183W	MNN11_____	-1.24	791063	637435	unknown	mannosyltransferase complex subunit
YKL179C	__________	-1.20	233527	194068	unknown	unknown; similar to kinesin and human kinesin-related
YLR113W	HOG1______	+1.42	634313	898337	signaling, high osmolarity pathway	MAPK (mitogen-activated protein kinase)
YMR215W	__________	-1.21	536652	445203	unknown	unknown; similar to Gas1p
YNL274C	__________	+1.94	177523	343899	unknown	putative alpha-ketoisocaproate reductase
YOR012W	__________	+1.01	131065	131747	unknown	unknown
YOR388C	FDH1______	-1.14	165978	145408	unknown	unknown; similar to formate dehydrogenases
YPR085C	__________	+1.05	294710	310798	unknown	unknown
YBR063C	__________	+1.09	225620	245341	unknown	unknown; similar to phosphopanthethein-binding proteins
YCR001W	__________	+1.18	102464	120473	unknown	unknown
YDL180W	__________	-1.03	294350	286579	unknown	unknown
YDR301W	CFT1______	+1.02	132157	134521	mRNA 3'-end processing	cleavage/polyadenylation factor CF II component
YER006W	__________	-1.44	1619707	1122405	unknown	unknown; similar to mouse Mmr1p protein
YGR103W	__________	-1.99	1879629	944188	unknown	unknown
YHR117W	TOM71_____	-1.15	738517	642136	mitochondrial protein targeting	outer membrane translocase component
YJR149W	__________	-1.12	187356	168003	unknown	unknown; similar to 2-nitropropane dioxygenase
YLR296W	__________	-1.44	161228	112289	unknown	unknown
YMR035W	IMP2______	+1.18	188591	222751	protein processing	mitochondrial inner membrane protease
YNL082W	PMS1______	-1.01	209485	206902	DNA repair	MutL homolog; mismatch repair
YOR200W	__________	+1.41	313039	440999	unknown	unknown
YPL180W	__________	+1.05	128544	134683	unknown	unknown
YBL002W	HTB2______	-1.27	197271	155518	chromatin structure	histone H2B
YBR263W	SHM1______	-1.08	594704	551665	one-carbon interconversion	serine hydroxymethyltransferase
YDL002C	NHP10_____	-1.06	456648	431602	chromatin structure	non-histone protein
YDR132C	__________	-1.32	226214	170961	unknown	unknown
YDR501W	PLM2______	-1.32	272091	206744	plasmid maintenance (putative)	unknown
YFL-TYB	TY2B______	-2.61	15695157	6017269
YGL194C	HOS2______	-1.35	226682	167411	chromatin structure	putative histone deacetylase
YIL093C	__________	+1.13	268168	302361	unknown	unknown
YJL195C	__________	-1.13	123169	109425	unknown	unknown
YKL191W	DPH2______	-1.75	684790	392227	diphthamide biosynthesis	unknown
YLR125W	__________	-1.04	101789	98229	unknown	unknown
YML002W	__________	+1.02	194208	198215	unknown	unknown
YMR227C	TAF67_____	-1.15	238925	208661	transcription	TFIID 67 kD subunit
YOR024W	__________	+1.05	194085	204372	unknown	unknown
YPL002C	SNF8______	+1.21	303856	367267	glucose derepression	unknown
YPR097W	__________	-1.29	565747	437985	unknown	unknown
YBR075W	__________	-1.11	524467	473165	unknown	unknown
YCR013C	__________	+1.16	14491276	16860779	unknown	unknown
YDL192W	ARF1______	+1.12	5393558	6054769	secretion	ADP-ribosylation factor
YDR313C	PIB1______	+1.06	308052	325526	signaling	phosphatidylinositol(3)-phosphate binding
YER015W	FAA2______	-1.04	207256	198362	fatty acid metabolism	acyl-CoA synthetase
YGL002W	ERP6______	+1.03	339606	348239	membrane trafficking; secretion (putative)	unknown
YGR113W	DAM1______	-1.06	197002	185687	unknown	unknown; interacts with Duo1p and Mps1p
YHR129C	ARP1______	-1.04	273773	264047	cytoskeleton	actin-related protein
YJL002C	OST1______	-1.02	570663	559535	protein glycosylation	oligosaccharyltransferase complex subunit
YKL002W	__________	+1.02	605313	617630	unknown	unknown
YLL002W	REM50_____	+1.03	162567	167988	diepoxybutane and mitomycin C resistance	unknown
YLR308W	CDA2______	+1.01	98080	98653	sporulation	chitin deacetylase
YMR046C	__________	+1.12	2807532	3156891	unknown	unknown
YNL094W	__________	+1.38	313489	431510	unknown	unknown
YOL002C	__________	+1.23	530610	652927	unknown	unknown
YOR212W	STE4______	-1.31	575256	439057	signaling, pheromone pathway	beta subunit of G protein
YPL191C	__________	+1.13	150629	170110	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YAR052C	__________	-1.32	168041	127389
YBL012C	__________	-1.13	128236	113722	unknown	unknown
YBR275C	RIF1______	-1.07	216688	201859	silencing	RAP1-interacting protein
YDL014W	NOP1______	-1.37	4373016	3185046	rRNA processing, 35S	fibrillarin homolog
YDR144C	MKC7______	-1.21	671732	554980	protein degradation	periplasmic aspartyl protease
YDR513W	TTR1______	+1.34	661580	889668	electron carrier	glutaredoxin
YFL011W	HXT10_____	-1.18	253029	215320	transport	hexose permease
YGL206C	CHC1______	+1.09	94640	102739	endocytosis and secretion	clathrin heavy chain
YHL010C	__________	+1.05	99662	104420	unknown	unknown
YIL104C	__________	+1.04	2274591	2376613	unknown	unknown
YJL207C	__________	+1.10	94789	104085	unknown	major facilitator superfamily
YKL203C	TOR2______	+1.02	96966	98755	signaling, cell cycle, meiosis and actin cytoskeleton organization	phosphatidylinositol 3-kinase
YLR137W	__________	+1.07	162060	173505	unknown	unknown
YMR239C	RNT1______	-1.41	241955	172184	rRNA processing	ribonuclease III
YNL296W	__________	+1.02	107839	109863	unknown	unknown
YOR036W	PEP12_____	+1.56	340987	531137	vacuolar protein targeting	t-SNARE
YPL014W	__________	+1.53	339449	520580	unknown	unknown
YPR109W	__________	+1.03	287373	294695	unknown	unknown
YBR086C	IST2______	+1.15	503068	577478	salt tolerance (putative)	unknown; similar to calcium and sodium channel proteins
YCR024C	__________	+1.18	150146	176965	protein synthesis	tRNA synthetase, mitochondrial, asparaginyl
YDL204W	__________	+1.05	103684	108674	unknown	unknown
YDR323C	PEP7______	+1.01	161530	162571	vacuolar protein targeting	vacuolar segregation protein
YER026C	CHO1______	+1.28	683841	875797	phospholipid metabolism	phosphatidylserine synthase
YGL014W	__________	-1.25	562445	448674	aging	Sir3p and Sir4p localization
YGR125W	__________	+1.06	308509	325911	unknown	unknown; sulfate permease family
YJL014W	CCT3______	-1.29	1139682	881221	protein folding	cytoplasmic chaperonin complex
YKL013C	ARC19_____	+1.36	669179	909231	cytoskeleton	cortical actin patch integrity
YLL014W	__________	+1.23	257718	317352	unknown	unknown
YLR319C	BUD6______	-1.08	201647	186825	bud site selection, bipolar	actin-interacting protein
YMR056C	AAC1______	+1.16	170945	199122	transport	mitochondrial ADP/ATP translocator
YNL106C	INP52_____	+1.01	1191588	1205036	endocytosis (putative)	inositol polyphosphate 5-phosphatase
YOL014W	__________	-4.06	1049013	258639	unknown	unknown
YOR224C	RPB8______	-1.32	1661503	1262323	transcription	shared subunit of RNA polymerase I,II, and III
YPL203W	PKA3______	+1.21	298379	360920	signaling, nutrient control of cell growth	cAMP-dependent protein kinase catalytic subunit
YAR074C	__________	-1.34	1097292	817163
YBL024W	NCL1______	-1.40	732048	522724	unknown	unknown; similar to human proliferating cell nucleolar antigen
YBR287W	__________	+1.56	308917	483259	unknown	unknown
YDL026W	__________	+1.07	115479	123540	unknown	unknown
YDR156W	RPA14_____	-1.11	385991	347645	transcription	RNA polymerase I subunit A14
YDR525W	__________	+1.04	107438	111746	unknown	unknown
YFL020C	PAU5______	+1.28	247292	317459	unknown	unknown; similar to members of the Srp1p/Tip1p family
YGL218W	__________	-1.09	151771	139577	unknown	unknown
YHL022C	SPO11_____	-1.06	119694	112937	meiosis, recombination	ds break formation complex catalytic subunit
YIL116W	HIS5______	+1.35	424166	573993	histidine biosynthesis	histidinol-phosphate aminotransferase
YJL219W	HXT9______	+1.01	163539	164843	transport	hexose permease
YKL215C	__________	+1.06	208773	222269	unknown	unknown; similar to Pseudomonas hydantoinases hyuA-hyuB
YLR149C	__________	+1.18	115286	135923	unknown	unknown
YML023C	__________	+1.06	180971	191462	unknown	unknown
YNL308C	KRI1______	-1.58	864547	546311	unknown	unknown; similar to Mgm1p
YOR048C	RAT1______	-1.52	843079	553450	transcription	exonuclease II
YPL026C	SKS1______	+1.16	286754	332925	glucose transport (putative)	protein kinase
YPR121W	THI22_____	+1.05	170179	178956	thaimine metabolism	unknown
YBR097W	VPS15_____	-1.02	105865	103431	vacuolar protein targeting	ser/thr protein kinase
YCR034W	FEN1______	-1.12	737391	655559	cell wall biogenesis	beta-1,3-glucan synthase subunit
YDL216C	__________	+1.01	148464	149965	unknown	unknown
YDR335W	MSN5______	+1.01	226270	228393	signaling	pheromone pathway
YER038C	__________	+1.63	144160	234860	unknown	unknown
YGL026C	TRP5______	+1.20	785041	939729	tryptophan biosynthesis	tryptophan synthase
YGR137W	__________	+1.57	850019	1333305	unknown	unknown; similar to tomato extensin PIR:S14983
YHR150W	__________	+1.24	149712	185118	unknown	unknown
YJL026W	RNR2______	+1.90	799410	1515359	DNA replication	ribonucleotide reductase
YKL025C	PAN3______	+1.04	318032	331613	mRNA processing	Pab1p-dependent poly(A) ribonuclease subunit
YLL026W	HSP104____	+2.09	269515	563587	heat shock response /thermotolerance	heat shock protein
YLR331C	__________	+1.01	140936	141976	unknown	unknown
YMR068W	__________	+1.05	157269	165267	unknown	unknown; similar to mouse I kappa B gamma and p70
YNL118C	DCP2______	-1.02	268699	262412	respiration (putative)	unknown; suppresses pet mutant
YOL026C	__________	+1.39	418698	581239	unknown	unknown
YOR236W	DFR1______	-1.18	560586	474434	folate biosynthesis	dihydrofolate reductase
YPL215W	CBP3______	+1.28	362495	462375	respiration	cytochrome-c reductase assembly
YER187W	__________	-1.26	148372	117607	unknown	unknown; similar to killer toxin Khs1p
YBL036C	__________	-1.04	629578	604243	unknown	unknown; similar to Pseudomonas aeroginosa twitching motility protein
YBR299W	MAL32_____	-1.21	154643	128025	maltose metabolism	alpha-glucosidase
YDL038C	__________	-2.30	299829	130189	unknown	unknown
YDR168W	CDC37_____	+1.12	552660	621119	cell cycle	chaperone
YDR537C	__________	-1.35	202634	150269	unknown	unknown
YFL031W	HAC1______	-1.19	125547	105558	unfolded protein response	transcription factor
YGL229C	SAP4______	-1.16	190030	164254	cell cycle	Sit4p-associated protein
YHL033C	RPL8A_____	-1.62	11467811	7057955	protein synthesis	ribosomal protein L8A
YIL128W	MET18_____	-1.15	267694	232723	transcription and DNA repair	regulator of TFIIH
YJR007W	SUI2______	-1.23	1699787	1385831	protein synthesis	translation initiation factor eIF-2 alpha subunit
YKR002W	PAP1______	-1.10	393575	357259	mRNA polyadenylation	poly(A) polymerase
YLR159W	__________	+1.01	107908	109061	unknown	unknown
YMR263W	__________	-1.05	336239	319530	unknown	unknown
YNL320W	__________	+1.25	316305	396591	unknown	unknown; similar to S. pombe bem1/bud5 suppressor (Bem46+)
YOR060C	__________	+1.03	144694	149712	unknown	unknown
YPL038W	MET31_____	-1.23	304910	247133	sulfur amino acid metbolism	transcription factor
YPR133C	__________	+1.07	604071	649176	unknown	unknown
YBR109C	CMD1______	+1.29	1207501	1560015	signaling	calmodulin
YCR046C	IMG1______	-1.10	399603	363425	protein synthesis	ribosomal protein, mitochondrial
YDL228C	__________	+1.06	103173	108929	unknown	unknown; similar to Achlya klebsiana glutamate
YDR347W	MRP1______	-1.09	511686	470426	protein synthesis	ribosomal protein, mitochondrial small subunit
YER047C	SAP1______	-1.17	198956	170423	mating type switching	AAA family protein
YGL038C	OCH1______	+1.26	391609	493431	protein glycosylation	membrane-bound mannosyltransferase
YGR149W	__________	+1.42	193334	274283	unknown	unknown; similar to hypothetical protein A-288
YHR162W	__________	+1.02	3054010	3125621	unknown	unknown
YJL038C	__________	+1.11	172270	191385	unknown	unknown
YKL036C	__________	-1.22	192592	158167	unknown	unknown
YLL038C	ENT4______	+1.03	126243	130428	endocytosis (putative)	unknown; epsin homolog
YLR343W	__________	+1.18	168590	198555	unknown	unknown; similar to Gas1p
YNL130C	CPT1______	+1.44	533404	768450	phospholipid metabolism	diacylglycerol cholinephosphotransferase

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YOL038W	PRE6______	+1.19	1934342	2308304	protein degradation	20S proteasome subunit (alpha4)
YOR248W	__________	+1.96	3192960	6273223	unknown	unknown
YPL227C	ALG5______	+1.08	869344	940318	protein glycosylation	UDP-glucose:dolichyl-phosphate glucosyltransferase
YBL048W	__________	+1.10	92889	102479	unknown	unknown
YDL050C	__________	-1.62	708721	436856	unknown	unknown
YDR178W	SDH4______	+1.99	307852	611972	TCA cycle, oxidative phosphorylation	succinate dehydrogenase anchor subunit
YFL041W	FET5______	+1.04	258223	269469	transport	iron transporter, multicopper oxidase
YGL241W	KAP114____	-1.04	223776	216046	nuclear protein targeting	karyopherin
YHL045W	__________	-1.01	131212	130330	unknown	unknown
YIL140W	SRO4______	+1.14	290371	332130	bud site selection, axial	unknown; plasma membrane protein
YJR018W	__________	-1.14	321189	281526	unknown	unknown
YKR014C	YPT52_____	+1.07	788257	847167	endocytosis	GTP-binding protein, rab family
YLR171W	__________	+1.01	299759	303011	unknown	unknown
YMR275C	BUL1______	+1.04	198784	206666	protein degradation, ubiquitin-mediated	unknown; binds Rsp5p ubiquitin ligase
YNL332W	THI12_____	+1.04	166224	173167	pyrimidine biosynthesis	unknown
YOR072W	__________	+1.03	117714	120700	unknown	unknown
YPL050C	MNN9______	-1.02	680137	663633	protein glycosylation	mannosyltransferase complex subunit
YPR143W	__________	-1.18	709059	602951	unknown	unknown
YBR120C	CBP6______	+1.06	172344	183060	protein synthesis, COB	translation activator of COB mRNA
YCR058C	__________	-1.03	91421	88524
YDL240W	LRG1______	-1.30	183391	141125	sporulation	GTPase-activating protein of the rho/rac family
YDR359C	VID21_____	-1.27	517199	406120	vacuolar protein targeting (putative)	unknown
YER058W	PET117____	+1.18	156628	185335	respiration	cytochrome c oxidase assembly factor
YGL050W	__________	-1.03	168869	164224	unknown	unknown
YGR161C	__________	-1.99	572018	287447	unknown	unknown
YHR174W	ENO2______	+1.33	15819104	20967996	glycolysis	enolase II
YJL051W	__________	-1.08	471203	435117	unknown	unknown
YKL048C	ELM1______	-1.02	691768	675985	pseudohyphal growth	protein kinase
YLL050C	COF1______	-1.16	326442	281792	cytoskeleton	cofilin
YLR355C	ILV5______	-1.81	5021155	2779289	isoleucine and valine biosynthesis	ketol-acid reductoisomerase
YMR090W	__________	-1.23	235619	191846	unknown	unknown; similar to malate dehydrogenases
YNL142W	MEP2______	-1.03	231084	224892	transport	ammonia permease
YOL050C	__________	+1.07	325837	347540	unknown	unknown
YOR260W	GCD1______	-1.47	763919	520208	protein synthesis	translation initiation factor eIF2b gamma subunit
YPL239W	YAR1______	-1.29	1215795	940286	unknown	unknown
YJR161C	COS5______	+1.13	745547	845119	unknown	unknown; similar to subtelomerically-encoded proteins
YBL060W	__________	+1.12	216911	242417	unknown	unknown
YDL062W	__________	-1.36	125264	92131	unknown	unknown
YDR189W	SLY1______	-1.10	557857	505896	secretion	SNARE docking complex subunit
YFL053W	DAK2______	-1.02	120976	119072	carbohydrate metabolism; stress response	dihydroxyacetone kinase
YGL253W	HXK2______	+1.15	4491416	5184508	glycolysis	hexokinase II
YHR005C	GPA1______	-1.70	1524469	898319	signaling, pheromone pathway	alpha subunit of G protein coupled to mating factor
YIL152W	__________	-1.27	562438	442403	unknown	unknown
YJR029W	__________	-1.12	15847924	14164089	unknown	unknown; similar to malate dehydrogenase
YKR026C	GCN3______	-2.34	2133405	911619	protein synthesis	translation initiation factor EIF2B
YLR183C	__________	-2.17	749307	345828	unknown	unknown
YML054C	CYB2______	+1.16	181936	210866	lactate utilization	cytochrome b2
YMR287C	MSU1______	-1.12	172792	154371	mitochondrial biogenesis	component of 3'-5' exonuclease complex
YNR005C	__________	-1.17	136663	117242	unknown	unknown
YOR084W	__________	+1.01	257325	258648	unknown	unknown
YPL060W	__________	-1.03	207354	201133	unknown	unknown; similar to Mrs2p
YPR155C	NCA2______	+1.01	188633	190240	ATP synthesis	regulates Atp6p and Atp8p synthesis
YBR132C	AGP2______	+1.12	129228	145230	transport	general amino acid permease
YCR069W	SCC3______	+1.08	247503	267149	protein folding	peptidyl-prolyl cis-trans isomerase
YDR004W	RAD57_____	+1.05	230167	241604	DNA repair and recombination	RecA homolog
YDR369C	XRS2______	-1.05	150621	144081	DNA repair and recombinations	required for ds break repair
YGL062W	PYC1______	+1.02	320278	325186	TCA cycle	pyruvate carboxylase 1
YGR169C	__________	-1.13	322313	286122	unknown	unknown
YHR186C	__________	-1.09	467194	430381	unknown	unknown; similar to Cdc39p, has WD (WD-40) domain
YJL063C	MRPL8_____	-1.09	583323	534335	protein synthesis	ribosomal protein, mitochondrial L8
YKL060C	FBA1______	+1.32	15899878	20984833	glycolysis	aldolase
YLL062C	MHT1______	-1.16	542993	468000	sulfur amino acid metabolism	S-methylmethionine:homocysteine S-methyltransferase
YLR367W	RPS22B____	-1.32	7704392	5838312	protein synthesis	ribosomal protein S22B
YMR102C	__________	-1.09	159504	146535	unknown	unknown
YNL154C	YCK2______	-1.02	1009372	988210	unknown	protein kinase
YOL060C	AMI3______	-1.04	190804	183419	mitochondrial morphology (putative)	unknown
YOR272W	YTM1______	-1.50	718725	480119	cytoskeleton (putative)	microtubule-associated protein
YPL250C	ICY2______	+1.07	143567	153784	cytoskeleton (putative)	unknown
YMR317W	__________	-1.04	110923	106906	unknown	unknown
YBL072C	RPS8A_____	+1.25	15812252	19839470	protein synthesis	ribosomal protein S8
YDL074C	__________	-1.11	328293	296532	unknown	unknown
YDR201W	SPC19_____	-1.26	509522	403118	cytoskeleton	spindle pole body component
YFL065C	__________	-1.41	298111	211455	unknown	unknown; similar to other subtelomerically-encoded proteins
YGR002C	__________	-1.05	227404	217095	unknown	unknown; similar to Drosophila melanogaster transcription
YHR016C	YSC84_____	+1.25	273488	342300	unknown	unknown; similar to hypothetical protein YFR024c-a
YIL163C	__________	+1.07	164177	176371	unknown	unknown
YJR041C	__________	-1.11	183807	166340	unknown	unknown; similar to Podospora anserina NADH dehydrogenase
YKR038C	__________	-1.03	538929	524637	unknown	unknown; similar to Qri7p and Pasteurella haemolytica
YLR195C	NMT1______	+1.04	323187	336735	protein processing	N-myristoyltransferase
YML065W	ORC1______	-1.25	335558	267627	DNA replication	origin recognition complex 104 kD subunit
YMR297W	PRC1______	+1.50	682583	1023402	sporulation	carboxypeptidase Y
YNR017W	MAS6______	-1.13	846715	752630	mitochondrial protein targeting	inner membrane translocase component
YOR096W	RPS7A_____	-1.25	11552644	9222194	protein synthesis	ribosomal protein S7A
YPL072W	UBP16_____	-1.06	279893	264238	protein degradation, ubiquitin-mediated	putative deubiquitinating enzyme
YPR163C	TIF3______	-1.60	4119065	2582117	protein synthesis	translation initiation factor eIF4B
YBR144C	__________	-1.03	96169	93259	unknown	unknown
YCR082W	__________	+1.30	437425	569936	unknown	unknown
YDR016C	DAD1______	+1.08	298079	321742	unknown	unknown; localizes to spindles and spindle pole bodies
YDR381W	YRA1______	+1.05	1250839	1314425	mRNA processing	RNA annealing protein
YER078C	__________	-1.19	239072	201462	unknown	unknown; similar to E. coli X-Pro aminopeptidase II
YGL074C	__________	-1.01	99574	98905	unknown	unknown
YGR181W	TIM13_____	-1.15	624943	545471	mitochondrial protein targeting	inner membrane translocase subunit
YHR198C	__________	-1.00	264504	263515	unknown	unknown; similar to Yhr199p
YJL075C	__________	-1.03	573821	555424	unknown	unknown
YKL072W	STB6______	-1.04	205507	197445	unknown	binds Sin3p
YLR007W	__________	-1.02	546276	535618	unknown	unknown
YLR379W	__________	-1.48	163942	110900	unknown	unknown
YMR114C	__________	+1.07	206505	220963	unknown	unknown
YNL166C	BNI5______	-1.09	546695	503305	unknown	unknown; localizes to mother-bud neck
YOL072W	__________	+1.01	244897	246759	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YOR284W	__________	-1.03	193488	187178	unknown	unknown
YPL260W	__________	+1.15	540564	619636	unknown	unknown
YBL084C	CDC27_____	+1.07	93954	100963	cell cycle	anaphase-promoting complex subunit
YDL086W	__________	-1.26	748690	596150	unknown	unknown
YFR009W	GCN20_____	+1.02	101074	102623	protein synthesis	activator of Gcn2p kinase; ABC superfamily
YGR014W	MSB2______	-1.23	540836	438383	bud emergence	unknown
YHR027C	RPN1______	-1.11	583755	525206	protein degradation	26S proteasome regulatory subunit
YIL174W	__________	+1.09	144380	157294	unknown	unknown; similar to Yir040p
YJR053W	BFA1______	-1.24	147336	119186	unknown	unknown
YKR050W	TRK2______	-1.00	113026	112806	transport	potassium permease
YLR207W	HRD3______	-1.02	192100	187679	protein degradation	HMG-CoA reductase degradation
YML077W	BET5______	-1.13	446283	393560	secretion (putative)	unknown; suppresses bet3 mutation
YMR307W	GAS1______	-1.12	3914546	3497614	unknown	cell surface glycoprotein
YNR029C	__________	+1.07	437733	469404	unknown	unknown; similar to Rhodococcus sp. nitrile hydratase
YOR108W	__________	-1.64	757380	461305	unknown	unknown; similar to Leu4p
YPL084W	BRO1______	+1.03	442302	455372	unknown	unknown
YPR175W	DPB2______	-1.00	177412	177341	DNA replication	polymerase epsilon 80 kDa subunit
YBR156C	SLI15_____	-1.06	297462	279332	mitosis, chromosome segregation	unknown
YCR093W	CDC39_____	-1.10	363475	329793	transcription	general negative regulator
YDR028C	REG1______	-1.03	246394	240227	glucose repression	protein phosphatase regulator
YDR393W	SHE9______	-1.20	291150	243312	unknown	unknown
YER089C	PTC2______	+1.03	702733	725147	unknown	protein phosphatase
YGL086W	MAD1______	-1.28	656341	514329	cell cycle	spindle checkpoint complex subunit
YGR193C	PDX1______	-1.21	676443	559486	glycolysis	pyruvate dehydrogenase
YHR210C	__________	-1.16	178579	154071	unknown	unknown; similar to Gal10p, has strong similarity to
YJL087C	TRL1______	-1.28	327669	255496	tRNA splicing	tRNA ligase
YKL084W	__________	-1.23	285130	232551	unknown	unknown
YLR019W	PSR2______	-1.14	401123	352341	salt tolerance (putative)	phosphatase
YLR390W	SSR1______	+2.46	1439671	3547852	unknown	secretory stress response
YMR125W	STO1______	-1.02	235371	231579	glycolysis	large subunit of the nuclear CAP-binding protein complex
YNL178W	RPS3______	+1.05	14107010	14742800	protein synthesis	ribosomal protein S3
YOL084W	__________	-1.45	204101	140398	unknown	major facilitator superfamily
YOR296W	__________	+1.07	140755	151120	unknown	unknown; may be involved in bud site selection (YPD)
YPL272C	__________	+1.27	174445	222134	unknown	unknown
YAL003W	EFB1______	-1.18	8408258	7109817	protein synthesis	translation elongation factor EF1-beta
YBR168W	__________	-1.10	239975	218796	unknown	unknown
YCR105W	__________	-1.40	202465	144546	unknown	unknown; similar to bovine alcohol dehydrogenase
YDR039C	ENA2______	-1.22	264572	217695	transport	plasma membrane ATPase
YDR406W	PDR15_____	-1.35	314429	232156	drug resistance	putative transporter
YER101C	AST2______	-1.18	272653	230193	plasma membrane protein targeting	targets plasma membrane ATPase
YGL099W	__________	-1.29	186627	144418	unknown	unknown; similar to human possible GTP-binding protein HSR1
YGR206W	__________	+1.04	206490	215458	unknown	unknown
YIL003W	__________	-1.40	393967	281281	unknown	unknown; similar to E. coli MRP protein
YJL100W	__________	+1.04	178338	184869	unknown	unknown
YKL097C	__________	+1.04	92039	95717	unknown	unknown
YLR032W	RAD5______	+1.08	85466	92152	DNA repair	DNA helicase
YLR404W	__________	+1.23	185428	228861	unknown	unknown
YMR137C	PSO2______	+1.03	135743	139705	DNA repair	required for interstrand crosslink repair
YNL191W	__________	-1.07	199801	186235	unknown	unknown
YOL097C	WRS1______	-1.44	1668358	1157447	protein synthesis	tRNA ligase, tryptophan
YOR307C	SLY41_____	-1.07	391063	366775	secretion	unknown; suppresses ypt1 null
YPR002W	PDH1______	+1.07	127110	136056	proionate metabolism (putative)	unknown; prpD homolog
YBL097W	BRN1______	-1.27	139592	109656	chromosome maintenance	unknown; homolog of human BRRN1
YCL002C	__________	-1.01	162809	161262	unknown	unknown
YDL099W	__________	-1.05	571161	542394	unknown	unknown
YDR222W	__________	+1.09	270050	295071	unknown	unknown
YEL003W	GIM4______	-1.15	511967	445444	protein folding	chaperone; tubulin folding
YFR022W	__________	-1.08	136334	126747	unknown	unknown
YGR027C	RPS25A____	-1.13	15487803	13689457	protein synthesis	ribosomal protein S25A
YHR039C	__________	-1.23	310563	252550	unknown	unknown; similar to aldehyde dehydrogenases
YIR010W	__________	+1.02	393080	399240	unknown	unknown
YJR066W	TOR1______	+1.00	1003820	1005215	signaling, cell cycle and meiosis	phosphatidylinositol 3-kinase
YKR063C	LAS1______	-1.26	442134	351203	morphogenesis, cytoskeletal assembly, bud formation	(putative) gene expression
YLR220W	CCC1______	+1.01	447685	451482	ion homeostasis, Ca2+ and Mn2+	transmembrane transporter, putative
YML090W	__________	+1.06	112442	119513	unknown	unknown
YNL003C	PET8______	+1.34	373768	499025	mitochondrial protein targeting	mitochondrial carrier family
YNR042W	__________	-1.10	130736	118947	unknown	unknown
YOR121C	__________	+1.26	277674	350296	unknown	unknown
YPL097W	MSY1______	-1.08	235695	217874	protein synthesis	tRNA synthetase, mitochondrial, tyrosyl
YPR188C	MLC2______	+1.32	563017	743505	cytoskeleton	myosin light chain
YAL016W	TPD3______	-1.08	571854	528796	tRNA biosynthesis, cytokinesis, ceramide-mediated signaling	protein phosphatase (PP2A regulatory subunit)
YBR180W	DTR1______	-1.14	151408	132787	sporulation	dityrosine transporter
YCRX10W	__________	+1.12	280491	315462
YDR051C	__________	-1.02	333262	326548	unknown	unknown
YDR418W	RPL12B____	-1.23	13649917	11119137	protein synthesis	ribosomal protein L12B
YER113C	__________	-1.19	438729	367750	unknown	unknown; similar to Emp70p
YGL111W	__________	-1.63	833292	512108	unknown	unknown
YGR218W	CRM1______	-1.00	398802	397665	nuclear protein targeting	nuclear export factor
YIL014W	MNT3______	-1.17	297970	255049	protein glycosylation	mannosyltransferase
YJL112W	MDV1______	-1.12	288697	258156	unknown	unknown
YKL108W	SLD2______	+1.00	189594	189756	DNA replication	unknown; interacts with Dpb11p
YLR042C	__________	-1.20	206790	172436	unknown	unknown
YLR414C	__________	+2.82	852547	2404355	unknown	unknown
YMR149W	SWP1______	+1.03	928488	957980	protein glycosylation	oligosaccharyltransferase complex subunit
YNL203C	__________	-1.07	140585	131334	unknown	unknown; similar to Bacillus subtilis
YOL107W	__________	+1.04	210616	218790	unknown	unknown; similar to Rnh70p and Pan2p
YOR319W	HSH49_____	-1.08	262784	242552	mRNA splicing	U2 snRNP protein; human SAP145 homolog
YPR014C	__________	+1.05	124653	131049	unknown	unknown
YBL107C	__________	-1.25	368381	294169	unknown	unknown
YCL014W	BUD3______	-1.07	110794	103978	cell polarity	bud site selection
YDL111C	RRP42_____	-1.25	704454	562362	rRNA processing	exoribonuclease
YDR234W	LYS4______	-1.21	224762	185284	lysine biosynthesis	homoaconitase
YEL015W	__________	-1.02	293866	289051	unknown	unknown
YGR037C	ACB1______	+1.41	998552	1410938	fatty acid metabolism	acyl-CoA ester transporter
YHR050W	SMF2______	+1.14	317677	361128	transport	(putative) manganese transporter
YJR078W	__________	+1.11	106914	118844	unknown	unknown; similar to indoleamine 2,3-dioxygenase
YKR075C	__________	+1.07	216657	230924	unknown	unknown; similar to Reg1p
YLR230W	__________	-1.13	292582	259779	unknown	unknown
YML100W	TSL1______	+2.66	231237	615116	trehalose metabolism	trehalose-6-phosphate synthase/phosphatase complex regulatory subunit
YNL015W	PBI2______	+2.51	268189	674399	unknown	protease inhibitor

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YNR054C	__________	-1.61	885861	550983	unknown	unknown
YOR133W	EFT1______	-1.17	6427040	5516047	protein synthesis	translation elongation factor eEF2
YPL109C	__________	+1.05	172957	182210	unknown	unknown
YPR200C	ARR2______	-1.01	175455	174047	arsenic resistance	unknown
YAL028A	__________	-1.11	98416	88995
YBR192W	RIM2______	-1.05	103489	98183	transport	mitochondrial carrier family
YDR063W	__________	+1.34	459076	616290	unknown	unknown
YDR430C	__________	-1.08	154333	143407	unknown	unknown; similar to class I family of aminoacyl-tRNA
YER124C	__________	-1.05	283254	269172	unknown	unknown
YGL123W	RPS2______	-1.22	5651491	4634666	protein synthesis	ribosomal protein S2
YGR230W	BNS1______	+1.07	236460	252529	unknown	unknown; similar to Spo12p; bypasses spo12/spo12 deletion
YIL026C	IRR1______	+1.09	187012	203184	unknown	colony morphology
YJL124C	LSM1______	-1.06	770009	724827	mRNA splicing (putative)	similar to snRNA-associated protein
YKL120W	OAC1______	-1.47	460171	314010	transport	oxaloacetate carrier
YLR054C	__________	+1.34	95837	127978	unknown	unknown
YMR159C	APG16_____	+1.01	129865	130898	autophagy	unknown; interacts with Apg5p and Apg12p; similar to human Sin3 complex component SAP1
YNL215W	__________	-1.12	453414	404958	unknown	unknown
YOL119C	__________	-1.00	211699	211390	unknown	unknown; similar to mammalian monocarboxylate
YOR331C	__________	+1.20	1862710	2233992	unknown	unknown
YPR026W	ATH1______	+1.11	114453	127609	trehalose metabolism	vacuolar acid trehalase
YBR006W	UGA5______	+1.32	158403	208564	GABA metabolism	succinate semialdehyde dehydrogenase
YCL027W	FUS1______	-1.72	226899	131735	mating; cell fusion	SH3 domain protein
YDL123W	__________	-1.05	226522	215782	unknown	unknown
YEL026W	SNU13_____	-1.32	3683575	2792957	mRNA splicing (putative)	U4/U6.U5 snRNP protein
YFR043C	__________	-1.04	299435	288610	unknown	unknown
YGR044C	RME1______	+1.49	306560	456621	meiosis	transcription factor
YHR061C	GIC1______	+1.25	214257	267337	bud emergence	binds Cdc42p
YIR031C	DAL7______	+1.04	175183	182630	allantoin utilization	malate synthase
YJR091C	JSN1______	+1.07	157752	168393	mitosis (putative)	unknown; suppresses tub2-150
YKR087C	__________	+1.03	414548	426060	unknown	unknown; similar to neutral zinc metallopeptidases
YLR242C	ARV1______	+1.02	217367	220935	unknown	unknown; similar to C.elegans R05H5.5 protein and Nup120p
YML111W	BUL2______	+1.13	160670	181553	protein degradation, ubiquitin-mediated (putative)	unknown; similar to Bul1p
YNL027W	CRZ1______	+1.25	1555184	1947326	(calcineurin) signaling	calcineurin-responsive transcription factor
YNR066C	__________	-1.06	126985	119827	unknown	unknown; similar to Pep1p
YOR143C	THI80_____	-1.01	353528	348626	thiamine metabolism	thiamine pyrophosphokinase
YPL121C	MEI5______	-1.14	135883	118809	meiosis, synapsis and recombination	unknown
YAL037W	__________	-1.07	110078	102813	unknown	unknown
YBR204C	__________	+1.12	134385	150373	unknown	unknown; similar to peroxisomal serine-active lipase
YDR075W	PPH3______	-1.06	283945	267267	cell cycle	protein phosphatase 2A
YDR442W	__________	+1.01	128493	129269	unknown	unknown
YER136W	GDI1______	+1.39	626825	868473	secretion	regulatory; GDP dissociation inhibitor
YGL135W	RPL1B_____	-1.18	14346248	12193390	protein synthesis	ribosomal protein L1B
YGR242W	__________	-1.22	215690	177446	unknown	unknown
YIL038C	NOT3______	-1.04	338545	324256	transcription	general repressor
YJL136C	RPS21B____	-1.22	8156294	6698611	protein synthesis	ribosomal protein S21B
YKL132C	RMA1______	-1.21	238594	197480	unknown; mating (putative)	unknown; similar to folylpolyglutamate synthase
YLR066W	SPC3______	+1.04	654298	683725	secretion	signal peptidase subunit
YLR436C	ECM30_____	+1.03	798557	823796	cell wall biogenesis	unknown
YMR171C	__________	+1.02	306046	311484	unknown	unknown
YNL227C	__________	-1.05	220516	209788	unknown	unknown; similar to E. coli DnaJ and other DnaJ-like
YOL131W	__________	+1.04	101193	105010	unknown	unknown
YOR343C	__________	+1.05	113409	118519	unknown	unknown
YPR038W	__________	-1.00	277837	277828	unknown	unknown
YBR016W	__________	-1.02	372891	367116	unknown	unknown
YCL039W	__________	-1.04	101849	97573	unknown	unknown
YDL133W	__________	-1.10	301945	274078	unknown	unknown
YDR258C	HSP78_____	+1.56	228140	355223	protein folding	mitochondrial
YEL038W	UTR4______	-1.05	417527	397070	unknown	unknown
YFR055W	__________	-2.44	505997	207664	unknown	unknown; similar to E. coli cystathionine beta
YGR056W	RSC1______	-1.30	181786	140151	chromatin structure	chromatin remodeling complex subunit
YHR071W	PCL5______	+1.38	413646	572242	cell cycle	cyclin (Pho85p)
YIR043C	__________	+1.18	816084	964118	unknown	unknown
YJR102C	__________	+1.09	151298	165640	unknown	unknown
YKR099W	BAS1______	-1.05	178756	170000	histidine, adenine biosynthesis	transcription factor
YLR254C	__________	-1.07	282324	264422	unknown	unknown
YML122C	__________	-1.05	159123	151988	unknown	unknown
YNL037C	IDH1______	+1.76	358263	630293	TCA cycle	isocitrate dehydrogenase
YOR155C	__________	+1.20	283725	339916	unknown	unknown
YPL133C	__________	-1.02	154808	151804	unknown	unknown; similar to transcription factors, has Zn[2]-Cys[6]
YAL048C	__________	-1.12	115052	102277	secretion (putative)	unknown; similar to Ras1p, Ras2p, and other GTP-binding proteins of the RAS superfamily
YBR216C	__________	-1.16	171479	147228	unknown	unknown
YDR087C	RRP1______	-1.80	933885	518133	rRNA processing	unknown
YDR454C	GUK1______	-1.29	2064971	1604319	guanine nucleotide metabolism	guanylate kinase
YGL147C	RPL9A_____	+1.05	15727091	16483697	protein synthesis	ribosomal protein L9A
YGR254W	ENO1______	+1.33	15784253	20995802	glycolysis	enolase I
YIL050W	PCL7______	+1.06	581014	616024	cell cycle	cyclin
YJL148W	RPA34_____	-1.56	1138561	729626	transcription	RNA polymerase I subunit
YKL144C	RPC25_____	-1.39	851664	610954	transcription	RNA polymerase III 25 kD subunit
YLR078C	BOS1______	-1.01	575794	570336	secretion	ER-to-Golgi v-SNARE
YLR448W	RPL6B_____	-1.16	15362342	13300567	protein synthesis	ribosomal protein L6b
YMR181C	__________	+1.65	272786	451142	unknown	unknown
YNL239W	LAP3______	+1.04	369969	385341	protein degradation	aminopeptidase of cysteine protease family
YOL143C	RIB4______	+1.58	1647385	2604167	riboflavin biosynthesis	6,7-dimethyl-8-ribityllumazine synthase
YOR353C	__________	+1.11	338434	374342	unknown	unknown; similar to adenylate cyclases
YPR050C	__________	+1.13	451396	509456	unknown	unknown
YBR028C	__________	-1.13	295642	262263	unknown	unknown; similar to Ypk2p/Ykr2p and Ypk1p
YCL051W	LRE1______	-1.12	208793	187035	laminarase resistance	unknown
YDL145C	COP1______	-1.29	1147725	890337	secretion	vesicle coat component
YDR266C	__________	-1.32	419775	318769	unknown	unknown
YEL050C	RML2______	-1.08	336373	312307	protein synthesis	ribosomal protein, mitochondrial L2
YGR068C	__________	-1.14	133930	117815	unknown	unknown; similar to Rod1p
YHR082C	KSP1______	+1.04	212966	222226	unknown	protein kinase
YJR114W	__________	-1.26	221373	175981	unknown	unknown
YMR001C	CDC5______	+1.07	282002	301919	cell cycle	G2/M protein kinase
YNL049C	SFB2______	-1.03	200841	195098	unknown	unknown; similar to Sec24p; binds Sed3p and Sec23p
YOR167C	RPS28A____	-1.15	10706063	9293616	protein synthesis	ribosomal protein S28A
YPL145C	KES1______	+1.03	880119	902405	sterol metabolism	unknown
YAL062W	GDH3______	-1.14	174305	152324	glutamate biosynthesis	NADP-glutamate dehydrogenase
YBR228W	__________	+1.05	185359	194249	unknown	unknown
YDR466W	__________	+1.08	127016	136554	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YER156C	__________	-1.55	1458607	940323	unknown	unknown
YGL159W	__________	-1.22	248753	203630	unknown	unknown
YGR266W	__________	-1.48	399715	270826	unknown	unknown
YIL062C	ARC15_____	+1.50	1061994	1587776	cytoskeleton	cortical actin patch integrity
YJL160C	__________	+1.01	137538	138581	unknown	unknown; similar to members of the Pir1p/Hsp150p/Pir3p
YKL156W	RPS27A____	-1.52	6514606	4287600	protein synthesis	ribosomal protein S27A
YLR090W	XDJ1______	-1.02	336082	328656	unknown	unknown; similar to E.coli dnaJ
YLR460C	__________	+1.02	158729	161765	unknown	unknown; similar to Ycr102p
YMR193W	MRPL24____	+1.02	345307	353608	protein synthesis	ribosomal protein, mitochondrial L24
YNL251C	NRD1______	-1.10	172816	157495	transcription	elongation; also mRNA abundance
YOL155C	__________	+1.45	251148	363906	unknown	unknown; similar to S. cerevisiae glucan 1,4-alpha-glucosidase
YOR365C	__________	-1.08	174890	162525	unknown	unknown
YPR062W	FCY1______	-1.10	1865323	1697424	pyrimidine metabolism	cytosine deaminase
YBR040W	FIG1______	-1.02	105347	102853	mating	extracellular integral membrane protein
YCL063W	__________	-1.12	123954	110817	unknown	unknown; similar to plant aminocyclopropane-1-carboxylate
YDL157C	__________	-1.00	346217	346123	unknown	unknown
YDR278C	__________	-1.03	102339	99276	unknown	unknown
YEL061C	CIN8______	-1.01	780237	773538	mitosis, spindle maintenance	kinesin related protein
YGR080W	TWF1______	+1.29	396026	511477	cytoskeleton	twifilin; actin monomer sequestering protein
YHR094C	HXT1______	-1.02	3496899	3427422	transport	hexose permease
YJR126C	__________	-1.01	427063	424029	unknown	unknown; similar to transferrin receptor
YLR274W	CDC46_____	-1.42	342341	241599	DNA replication	MCM initiator complex
YMR013C	SEC59_____	-1.07	256686	239493	protein glycosylation	mannosyltransferase (putative)
YNL059C	ARP5______	-1.04	381463	365422	cytoskeleton (putative)	actin-related protein
YOR179C	__________	-1.04	243300	234752	unknown	unknown
YPL157W	__________	-1.11	327855	294947	unknown	unknown
YAR008W	SEN34_____	-1.06	145690	136959	tRNA splicing	splicing endonuclease subunit
YBR240C	THI2______	-1.06	98401	93106	thiamine biosynthesis	transcription factor
YDR109C	__________	-1.01	218965	217583	unknown	unknown; similar to FGGY kinase family (GB:Z48758)
YDR478W	SNM1______	-1.15	196075	170170	rRNA processing	RNase MRP component
YGL171W	ROK1______	-1.81	648277	357326	rRNA processing	RNA helicase
YGR278W	__________	-1.16	263057	225850	unknown	unknown
YJL172W	CPS1______	+1.96	244132	478251	protein degradation	vacuolar carboxypeptidase yscS
YKL168C	KKQ8______	+1.14	163932	186599	unknown	protein kinase
YLR102C	APC9______	+1.08	160157	172295	cell cycle	anaphase-promoting complex subunit
YMR204C	__________	-1.09	182457	166952	unknown	unknown
YNL263C	YIF1______	+1.05	612433	642408	unknown	interacts with Yip1p; similar to NADH dehydrogenases
YOR001W	RRP6______	-1.43	550628	385342	rRNA processing, 5.8S	unknown
YOR377W	ATF1______	-1.34	265968	197801	acetate ester biosynthesis	alcohol acetyltransferase
YPR074C	TKL1______	-1.05	122959	117122	pentose phosphate cycle	transketolase
YBR052C	__________	+1.44	440928	635742	unknown	unknown; similar to Ycp4p, S. pombe obr1, and E. coli trp
YCLX02C	__________	-1.31	129013	98513
YDL169C	UGX2______	+1.29	113642	146941	unknown	unknown
YDR290W	__________	-1.02	108266	106306	unknown	unknown
YEL073C	__________	+1.01	126357	127357	unknown	unknown
YGR092W	DBF2______	+1.25	307861	383844	cell cycle	late mitosis; protein kinase
YHR106W	TRR2______	-1.06	924436	869703	pyrimidine biosynthesis	thioredoxin reductase
YJR138W	IML1______	-1.04	129369	124861	plasmid maintenance (outative)	unknown
YLR286C	CTS1______	+1.10	2051285	2250270	cell wall biogenesis	endochitinase
YMR025W	__________	+1.23	181568	223164	unknown	unknown
YNL071W	LAT1______	+1.32	3378710	4464790	glycolysis	dihydrolipoamide S-acetyltransferase
YOR191W	RIS1______	-1.17	418482	359096	silencing	SNF2 family DNA-dependent ATPase
YPL169C	MEX67_____	-1.10	462906	419994	mRNA export	poly(A)+RNA binding protein
YAR030C	__________	+1.23	125057	153586	unknown	unknown
YBR252W	DUT1______	-1.40	721770	514108	pyrimidine metabolism	dUTP pyrophosphatase
YDR121W	DPB4______	-1.21	501233	412662	DNA replication	DNA polymerase epsilon subunit
YDR490C	PKH1______	+1.05	271986	286064	unknown	protein kinase (ser/thr)
YER176W	ECM32_____	-1.15	206174	179899	cell wall biogenesis	DNA helicase I
YGL183C	__________	-1.16	170368	146932	unknown	unknown
YGR290W	__________	-1.37	174288	127089	unknown	unknown
YIL082W	__________	-1.12	315122	282507	unknown	unknown
YJL184W	__________	-1.09	637436	582741	unknown	unknown
YKL180W	RPL17A____	+1.12	15821417	17705086	protein synthesis	ribosomal protein L17A
YLR114C	EFR4______	-1.27	590621	466251	unknown	unknown; similar to Drosophila bicaudal-D protein; null requires PHO85
YMR216C	SKY1______	-1.01	289601	286048	unknown	protein kinase
YNL275W	__________	-1.18	208986	177213	unknown	unknown; similar to human band 3 anion transport protein
YOR013W	__________	+1.06	206841	218600	unknown	unknown
YOR389W	__________	+1.04	244329	253071	unknown	unknown
YPR086W	SUA7______	-1.17	657064	561942	transcription	TFIIB subunit
YBR064W	__________	+1.01	109241	110125	unknown	unknown
YCR002C	CDC10_____	+1.15	858039	983646	cytokinesis	septin
YDL181W	INH1______	+2.05	420895	864604	ATP synthesis	mitochondrial ATPase inhibitor
YDR302W	GPI11_____	+1.03	356147	367515	protein processing	GPI-phosphoethanolamine transferase subunit
YGR104C	SRB5______	-1.02	283937	278851	transcription	RNA polymerase II mediator subunit
YHR118C	ORC6______	-1.18	764416	645895	DNA replication	origin recognition complex, 50 KD subunit
YJR150C	DAN1______	-1.14	204585	179463	unknown	unknown; induced during anaerobic growth
YLR297W	__________	+2.39	209802	500592	unknown	unknown
YMR036C	MIH1______	+1.05	175013	183005	cell cycle	M-phase phosphatase
YNL083W	__________	-1.08	133221	123305	unknown	unknown; mitochondrial carrier (MCF) family
YOR201C	PET56_____	+1.23	326553	400471	rRNA processing, mitochondrial	ribose methyltransferase
YPL181W	__________	+1.05	112706	117910	unknown	unknown
YBL003C	HTA2______	-1.02	6937510	6773888	chromatin structure	histone H2A
YBR264C	YPT10_____	-1.02	460845	452936	unknown	unknown; similar to rab proteins and other small GTP-binding
YDL003W	MCD1______	-1.11	478639	431821	mitosis, sister chromatid cohesion	unknown
YDR133C	__________	+1.30	15453859	20096615	unknown	unknown
YDR502C	SAM2______	-1.29	2349886	1820884	methionine biosynthesis	regulator; S-adenosylmethionine synthetase
YFL001W	DEG1______	-1.03	220366	213847	tRNA processing	pseudouridine synthase
YGL195W	GCN1______	+1.13	120939	136748	protein synthesis	translation activator of GCN4
YHL002W	__________	+1.13	338025	383334	unknown	unknown
YIL094C	LYS12_____	+1.12	1835434	2056487	lysine biosynthesis	homo-isocitrate dehydrogenase
YJL196C	ELO1______	+1.24	914283	1134680	fatty acid metabolism	fatty acid elongation protein
YKL192C	ACP1______	+1.08	944743	1020053	fatty acid biosynthesis	mitochondrial acyl carrier protein
YLR126C	__________	-1.07	183275	171696	unknown	unknown; similar to Pseudomonas aeroginosa anthranilate
YML003W	__________	+1.10	120616	132862	unknown	unknown
YMR228W	MTF1______	+1.05	196420	206536	transcription	mitochondrial RNA polymerase specificity factor
YNL285W	__________	+1.13	177769	200529	unknown	unknown
YOR025W	HST3______	-1.19	400379	336262	silencing	unknown
YPL003W	ULA1______	+1.26	270463	340905	protein degradation, Rub1p-mediated	Rub1p activating protein
YPR098C	__________	+1.47	363495	532826	unknown	unknown
YBR076W	ECM8______	+1.38	130377	179410	cell wall biogenesis	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YCR014C	POL4______	+1.06	192514	204156	DNA repair	DNA polymerase IV
YDL193W	__________	-1.12	338929	301963	unknown	unknown
YDR314C	__________	-1.14	115757	101427	unknown	unknown
YER016W	BIM1______	-1.24	607143	490232	cytoskeleton	microtubule binding protein
YGL003C	CDH1______	-1.08	175813	163543	cell cycle	cyclin degradation
YGR114C	__________	-1.47	185763	126766	unknown	unknown
YHR130C	__________	-1.01	106079	105400	unknown	unknown
YJL003W	__________	+1.04	220993	229364	unknown	unknown
YKL003C	MRP17_____	-1.19	426883	359243	protein synthesis	ribosomal protein, mitochondrial small subunit
YLL003W	SFI1______	-1.00	215589	214991	unknown	unknown
YLR309C	IMH1______	-1.20	182136	152369	secretion (putative)	unknown; suppresses ypt6 ts mutation
YMR047C	NUP116____	-1.17	726616	618886	nuclear protein targeting	nuclear pore protein
YNL095C	__________	-1.15	201564	175782	unknown	unknown; similar to Ecm3p
YOL003C	__________	-1.03	337502	329076	unknown	unknown
YOR213C	SAS5______	-1.03	264806	255853	silencing	unknown
YPL192C	__________	-1.22	251370	206433	unknown	unknown
YAR053W	__________	-1.15	139675	121273	unknown	unknown
YBL013W	FMT1______	-1.11	116901	104949	tRNA processing	met-tRNA formyltransferase
YBR276C	PPS1______	+1.04	363859	377078	unknown	protein phosphatase
YDL015C	__________	+1.24	852270	1054810	unknown	unknown; similar to rat synaptic glycoprotein SC2
YDR145W	TAF61_____	+1.20	2600544	3126732	transcription	TFIID 61 kDsubunit
YDR514C	__________	-1.04	519637	501949	unknown	unknown
YFL012W	__________	-1.04	120012	115244	unknown	unknown
YGL207W	SPT16_____	+1.04	397895	413538	chromatin structure	non-histone protein
YHL011C	PRS3______	-1.07	251598	234248	purine biosynthesis	ribose-phosphate pyrophosphokinase 3
YIL105C	__________	-1.26	5888840	4656672	unknown	unknown; similar to Ask10p and Ynl047p
YJL208C	NUC1______	-1.38	423522	307854	mitochondrial recombination	endonuclease
YKL204W	EAP1______	-1.01	116457	114780	translation	unknown; associates with translation initiation factor eIF4E
YLR138W	NHA1______	+1.00	259051	259938	transport (putative)	Na+/H+ antiporter
YML012W	ERV25_____	+1.24	520941	648447	secretion	vesicle coat component
YMR240C	CUS1______	-1.06	512508	485785	mRNA splicing	U2 snRNP protein
YNL297C	MON2______	+1.03	104367	106995	secretion (putative)	unknown; brefeldin A sensitive; monensin sensitive
YOR037W	CYC2______	-1.00	281519	280259	mitochondrial protein targeting	cytochrome c import factor
YPL015C	HST2______	+1.31	298447	389685	unknown	similar to Sir2p
YPR110C	RPC40_____	-1.39	1400534	1008915	transcription	RNA polymerase III 40 kD subunit
YBR087W	RFC5______	-1.07	416908	391328	DNA replication	DNA polymerase processivity factor
YCR024C	PMP1______	+1.21	1289581	1564676	H+ homeostasis	regulates plasma membrane H+-ATPase
YDL205C	HEM3______	-1.30	299891	230679	heme biosynthesis	phorphobilinogen deaminase (uroporphyrinogen synthase)
YDR324C	__________	-1.71	422469	246817	unknown	unknown; similar to G-protein beta subunits
YER027C	GAL83_____	-1.12	407424	363902	glucose repression	component of Snf1 complex
YGL015C	__________	-1.22	145854	119743	unknown	unknown
YGR126W	__________	+1.01	107868	109117	unknown	unknown
YHR140W	__________	-1.03	127839	124178	unknown	unknown
YJL015C	__________	+1.30	237446	307578	unknown	unknown
YKL014C	__________	-1.50	423595	282090	unknown	unknown
YLL015W	BPT1______	+1.06	283500	299434	transport	bile pigment transporter
YLR320W	__________	+1.03	96295	99658	unknown	unknown
YMR057C	__________	-1.00	116382	115946	unknown	unknown
YNL107W	YAF9______	-1.03	302466	292966	unknown	unknown; similar to human AF-9 protein
YOL015W	__________	+1.04	128781	133332	unknown	unknown
YOR225W	__________	+1.02	366151	373893	unknown	unknown
YPL204W	HRR25_____	+1.09	760732	828168	DNA repair	casein kinase I isoform
YBL025W	RRN10_____	-1.06	158178	149484	transcription	component of upstream activation factor complex (UAF)
YBR288C	APM3______	-1.18	259713	219219	vacuolar protein targeting	AP-3 complex subunit
YDL027C	__________	+1.51	226067	340833	unknown	unknown
YDR157W	__________	-1.22	345343	283962	unknown	unknown
YDR526C	__________	-1.28	265149	206964	unknown	unknown
YFL021W	GAT1______	-1.08	206356	191329	nitrogen catabolism	transcription factor
YGL219C	__________	+1.04	268610	278871	unknown	unknown; similar to Mycoplasma genitalium threoninyl-tRNA
YHL023C	__________	-1.03	242564	235614	unknown	unknown
YIL117C	__________	+2.79	358672	1000201	unknown	unknown
YJL220W	__________	+1.12	110567	123846	unknown	unknown; similar to alpha-D-glucosidase (maltase)
YKL216W	URA1______	+1.41	3013258	4242721	pyrimidine biosynthesis	dihydroorotate dehydrogenase
YLR150W	STM1______	-1.16	10858516	9334294	unknown	unknown; suppressor of tom1 and pop2 mutations
YMR252C	__________	+1.34	211012	282533	unknown	unknown
YNL309W	STB1______	-1.03	163724	159186	unknown	binds Sin3p
YOR049C	__________	-1.04	242746	233512	unknown	unknown
YPL027W	__________	-1.08	122072	112781	unknown	unknown
YPR122W	AXL1______	+1.05	98683	103742	bud site selection, axial	unknown; insulin-degrading enzyme homolog
YBR098W	MMS4______	+1.06	95833	101296	methylmethanesulfonate resistance	transcription activator (putative)
YCR035C	RRP43_____	-1.06	191587	180240	rRNA processing	exoribonuclease
YDL217C	TIM22_____	-1.19	326952	275495	mitochondrial protein targeting	inner membrane carrier protein
YDR336W	__________	-1.19	208487	174584	unknown	unknown
YGL027C	CWH41_____	+1.02	485281	492715	cell wall biogenesis	beta-1,6-glucan assembly protein
YGR138C	__________	+1.75	415549	727921	unknown	major facilitator superfamily
YHR151C	__________	+1.08	213037	230477	unknown	unknown
YJL027C	__________	+1.02	104795	107307	unknown	unknown
YKL026C	GPX1______	+1.13	95515	107516	glutathione metabolism (putative)	glutathione peroxidase (putative)
YLL027W	ISA1______	+1.24	407782	504913	unknown	unknown; Iron Sulfur Assembly -- IscA/NifA homolog
YLR332W	MID2______	+1.52	385350	585501	mating (putative)	unknown; mutant is sensitive to matin pheromone
YMR069W	__________	+1.10	107928	118215	unknown	unknown
YNL119W	__________	-1.14	1363118	1190565	unknown	unknown
YOL027C	__________	-1.21	375460	311345	unknown	unknown
YOR237W	HES1______	-1.03	151116	146193	sterol metabolism	unknown
YPL216W	__________	-1.12	262057	234814	unknown	unknown
YER188W	__________	-1.04	150825	144915	unknown	unknown
YBL037W	APL3______	-1.05	116959	111523	secretion	clathrin associated
YBR300C	__________	-1.22	148620	122022	unknown	unknown
YDL039C	__________	-2.09	304282	145425	unknown	unknown
YDR169C	STB3______	-1.25	226543	181124	unknown	binds Sin3p
YDR538W	PAD1______	-1.48	210289	142298	phenylacrylic acid resistance	phenylacrylic acid decarboxylase
YFL032W	__________	-1.32	173419	131198	unknown	unknown
YGL230C	__________	+1.16	117116	136339	unknown	unknown
YHL034C	SBP1______	+1.19	3046414	3622160	RNA processing	single stranded nucleic acid binding protein
YIL129C	TAO3______	+1.46	436238	637080	transcription (putative)	unknown; transcripiotnal activator of OCH1
YJR008W	__________	+1.40	203842	285480	unknown	unknown
YKR003W	__________	+1.59	312321	497625	unknown	unknown; similar to human oxysterol-binding protein
YLR160C	ASP3-4____	+19.75	118015	2331149	asparagine utilization	L-asparaginase II
YML034W	SRC1______	+1.06	136743	145167	unknown	unknown; induced at G2/M
YMR264W	CUE1______	+1.18	729668	860328	protein degradation, ubiquitin-mediated	recruits enzyme Ubc7p to membrane

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YNL321W	__________	+1.14	142739	162091	unknown	unknown; calcium permease family
YOR061W	CKA2______	+1.09	137530	150492	cell cycle	casein kinase II
YPL039W	__________	+1.06	158541	167554	unknown	unknown
YPR134W	MSS18_____	+1.34	269642	361609	mRNA splicing, COX1 mRNA	unknown
YCR047C	__________	-1.59	669021	421293	unknown	unknown; similar to rat methylglycine transferase
YDL229W	SSB1______	-1.09	116903	107488	translation	cytosolic HSP70
YDR348C	__________	-1.16	256155	220074	unknown	unknown
YER048C	CAJ1______	-1.06	866326	817778	unknown	unknown; similar to E. coli DnaJ
YGL039W	__________	-1.10	453666	412180	unknown	unknown
YGR150C	__________	-1.05	275841	261785	unknown	unknown; similar to Yjl083p
YHR163W	SOL3______	+1.12	854896	960839	tRNA splicing, putative	unknown
YJL039C	NUP192____	-1.34	310138	230893	nuclear protein targeting	nuclear pore protein
YKL037W	__________	+1.09	152849	165999	unknown	unknown
YLL039C	UBI4______	-1.30	14908166	11509059	protein degradation, ubiquitin-mediated	ubiquitin
YLR344W	RPL26A____	-1.25	12126455	9730493	protein synthesis	ribosomal protein L26A
YMR080C	NAM7______	-1.39	477044	343971	mRNA decay	RNA helicase, putative
YNL131W	TOM22_____	+1.01	999246	1005997	mitochondrial protein targeting	outer membrane translocase component
YOL039W	RPP2A_____	+1.33	15798264	21035790	protein synthesis	ribosomal protein P2A/L44, acidic
YOR249C	APC5______	+1.06	479069	507783	mitosis	anaphase-promoting complex subunit
YPL228W	CET1______	-1.27	462077	363012	mRNA capping	capping enzyme beta subunit, RNA 5'-triphosphatase
YHR219W	__________	+1.40	1679397	2352145	unknown	unknown; similar to other subtelomerically-encoded proteins
YBL049W	__________	+1.07	110843	118943	unknown	unknown
YDL051W	LHP1______	-1.72	868517	504437	tRNA processing	RNA binding protein
YDR179C	__________	+1.02	158807	162758	unknown	unknown
YFL042C	__________	-1.03	139542	135192	unknown	unknown; similar to Yhr080p
YGL242C	__________	+1.58	554503	874291	unknown	unknown; similar to ankyrin and coiled-coil proteins
YHL046C	__________	+1.36	297984	404525	unknown	unknown; similar to members of the Srp1p/Tip1p family
YIL141W	__________	-1.01	125481	124122	unknown	unknown
YJR019C	TES1______	+1.15	145278	166706	fatty acid metabolism	peroxisomal acyl-CoA thioesterase
YKR015C	__________	+1.02	155724	158957	unknown	unknown
YLR172C	DPH5______	-1.37	1290877	943249	diphthamide biosynthesis	diphthamide methyltransferase
YMR276W	DSK2______	+1.11	933164	1037737	spindle pole body dupl	ubiquitin-like protein
YNL333W	SNZ2______	+1.22	276548	337266	unknown	unknown; induced in stationary phase
YOR073W	__________	-1.22	308927	253799	unknown	unknown
YPL051W	ARL3______	+1.07	310950	334205	unknown	unknown; Similar to ADP-ribosylation factor
YPR144C	__________	-1.29	416229	323197	unknown	unknown; similar to RNA polymerase beta subunit
YBR121C	GRS1______	-1.42	2666166	1876255	protein synthesis	tRNA synthase, glycyl
YCR059C	__________	-1.57	497267	316475	unknown	unknown
YDL241W	__________	-1.30	284493	219677	unknown	unknown
YDR360W	__________	-1.15	119114	103450	unknown	unknown
YER059W	PCL6______	+1.03	213406	219968	cell cycle	cyclin (Pho85p)
YGL051W	__________	-1.06	251984	237198	unknown	unknown
YHR175W	CTR2______	+1.06	510131	540078	transport	copper transporter
YJL052W	TDH1______	+1.32	15958128	20988036	glycolysis	glyceraldehyde-3-phosphate dehydrogenase 1
YKL049C	CSE4______	+1.22	562231	683407	chromatin structure, centromeric	histone-related
YLL051C	FRE6______	-1.27	481879	380626	unknown	unknown; similar to ferric reductase Fre2p
YLR356W	__________	+1.76	217902	383466	unknown	unknown; similar to Scm4p, possible Cdc4p-interacting
YMR091C	NPL6______	-1.09	759819	696943	nuclear protein targeting	unknown
YNL143C	__________	-1.67	539124	322663	unknown	unknown
YOL051W	GAL11_____	-1.23	1666146	1355452	transcription	RNA polymerase II mediator subunit
YOR261C	RPN8______	+1.20	1548960	1856436	protein degradation	26S proteasome regulatory subunit
YPL240C	HSP82_____	-1.05	4868728	4620640	protein folding	HSP90 homolog
YJR162C	__________	+1.07	168279	179337	unknown	unknown; similar to subtelomerically-encoded proteins
YBL061C	SKT5______	+1.10	160063	175347	cell wall biogenesis	chitin synthase regulator
YDL063C	__________	-1.46	441993	302157	unknown	unknown
YDR190C	RVB1______	-1.12	1084878	966387	unknown	unknown; similar to RUVB
YFL054C	__________	-1.01	119852	118376	unknown	unknown; similar to Fps1p and Ypr192p transmembrane channels
YGL254W	FZF1______	-1.20	173839	144307	sulfite metabolism	(putative) transcription factor
YIL153W	RRD1______	+1.17	421857	491600	drug resistance	unknown
YJR030C	__________	-1.19	315066	264985	unknown	unknown
YKR027W	__________	-1.02	189060	185109	unknown	unknown
YLR184W	__________	+1.08	95909	103232	unknown	unknown
YML055W	SPC2______	+1.41	451911	636786	secretion	signal peptidase subunit
YMR288W	__________	+1.08	104615	113057	unknown	unknown
YNR006W	VPS27_____	+1.06	234475	248122	vacuolar protein targeting	component of class E protein complex
YOR085W	OST3______	-1.04	363331	349067	protein glycosylation	oligosaccharyltransferase complex subunit
YPL061W	ALD6______	+1.66	2427823	4027908	ethanol utilization	acetaldehyde dehydrogenase
YPR156C	__________	+1.70	346868	589988	unknown	major facilitator superfamily
YBR133C	HSL7______	-1.13	258493	229287	cell cycle	Swe1p (kinase) regulator
YCR070W	__________	+1.34	508437	683530
YDR005C	MAF1______	+1.09	276794	300865	protein targeting (putative)	unknown
YDR370C	__________	-1.25	344350	275472	unknown	unknown
YER068W	MOT2______	-1.04	225289	216838	mating	transcriptional regulator
YGL063W	PUS2______	-1.16	149669	129539	tRNA processing	pseudouridine synthase
YGR170W	PSD2______	-1.02	213020	209747	phospholipid metabolism	phosphatidylserine decarboxylase 2
YHR187W	IKI1______	-1.15	356703	308974	killer toxin sensitivity	unknown
YJL064W	__________	-1.14	345239	302144	unknown	unknown
YKL061W	__________	+1.43	260736	373404	unknown	unknown
YLL063C	AYT1______	-1.02	180510	176767	unknown	transacetylase (putative)
YLR368W	__________	+1.12	199231	222459	unknown	unknown
YMR103C	__________	-1.04	109819	105730	unknown	unknown
YNL155W	__________	+1.10	549188	605628	unknown	unknown
YOL061W	PRS5______	-1.19	853261	716840	purine, pyrimidine, tryptophan and histidine biosynthesis	phosphoribosylpyrophosphate synthetase
YOR273C	__________	+1.29	168701	217904	unknown	unknown; similar to members of major facilitator superfamily
YPL251W	__________	-1.46	545929	374809	unknown	unknown
YMR318C	__________	+1.04	1615314	1683808	unknown	unknown; similar to alcohol-dehydrogenases
YBL073W	__________	-1.26	131076	103659	unknown	unknown
YDL075W	RPL31A____	-1.31	15474127	11770087	protein synthesis	ribosomal protein L31A
YDR202C	RAV2______	-1.13	564173	497237	vacuolar acidification (putative)	unknown; regulates V-ATPase
YFL066C	__________	-2.20	442787	201266	unknown	unknown; similar to other subtelomerically-encoded proteins
YGR003W	__________	+1.01	146399	147947	unknown	unknown
YHR017W	YSC83_____	+1.08	282501	304131	unknown	unknown; similar to S.douglasii YSD83
YIL164C	NIT1______	-1.05	237707	227012	unknown	nitrilase
YJR042W	NUP85_____	+1.06	121027	128684	nuclear protein targeting	nuclear pore protein
YKR039W	GAP1______	+1.14	134108	152913	transport	general amino acid permease
YLR196W	PWP1______	-1.49	766547	513643	unknown	unknown; similar to beta-transducin superfamily
YML066C	__________	+1.06	246016	261315	unknown	unknown
YMR298W	__________	+1.01	665459	674517	unknown	unknown
YNR018W	__________	+1.12	1035290	1156760	unknown	unknown
YOR097C	__________	+1.21	282889	343091	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YPL073C	__________	+1.03	123716	128008	unknown	unknown
YPR164W	KIM3______	+1.02	114287	116999	diepoxybutane and mitomycin C resistance	unknown
YBR145W	ADH5______	-1.54	917428	594290	glycolysis	alcohol dehydrogenase V
YCR083W	TRX3______	-1.09	203178	187250	oxidative stress response	thioredoxin, mitochondrial
YDR017C	KCS1______	-1.31	666988	507473	cell wall organization	(putative) transcription factor
YDR382W	RPP2B_____	+1.22	15852473	19393728	protein synthesis	ribosomal protein L45, acidic
YER079W	__________	-1.05	281471	267279	unknown	unknown
YGL075C	MPS2______	+1.05	173000	181712	cytoskeleton	spindle pole body duplication; nuclear envelope/ER protein
YGR182C	__________	-1.00	1042635	1040787	unknown	unknown
YHR199C	__________	+1.17	550404	643156	unknown	unknown; similar to Yhr198p
YJL076W	NET1______	-1.11	185988	168077	silencing	unknown
YKL073W	LHS1______	+1.04	355684	368216	secretion	chaperone; ER protein translocation
YLR008C	__________	+1.07	125941	135015	unknown	unknown
YLR380W	CSR1______	-1.00	455432	453687	unknown	unknown; multicopy suppressor of chs5 spa2 double mutant
YMR115W	__________	-1.01	333536	331550	unknown	unknown
YNL167C	SKO1______	+1.03	228436	234500	transcription	CREB-like transcriptional repressor
YOL073C	__________	+1.13	287309	325454	unknown	unknown
YOR285W	__________	+2.14	1020039	2183081	unknown	unknown; similar to Drosophila melanogaster heat shock
YPL261C	__________	+1.07	115542	124200	unknown	unknown
YBL085W	BOI1______	+1.01	91173	91852	bud growth	binds Bem1p
YDL087C	LUC7______	-1.21	147047	121945	mRNA processing (putative)	unknown; synthetic lethal with cap-binding complex
YFR010W	UBP6______	+1.10	617128	680809	protein degradation, ubiquitin-mediated	deubiquitinating enzyme (putative)
YGR015C	__________	+1.10	179163	197406	unknown	unknown
YHR028C	DAP2______	+1.00	489429	490181	protein degradation	dipeptidyl aminopeptidase B
YIL175W	__________	-1.02	208802	205378	unknown	unknown
YJR054W	__________	+1.31	327791	428496	unknown	unknown
YKR051W	__________	-1.04	337716	325262	unknown	unknown
YLR208W	SEC13_____	+1.06	1180883	1247706	secretion	vesicle coat component
YML078W	CPR3______	+1.69	2086457	3517972	protein folding	peptidyl-prolyl cis-trans isomerase
YMR308C	PSE1______	-1.31	487117	371109	nuclear protein targeting	beta-karyopherin
YNR030W	ECM39_____	+1.19	383605	457388	cell wall biogenesis	unknown
YOR109W	INP53_____	-1.05	585230	556554	vesicle trafficking; phosphatidylinositol metabolism	inositol polyphosphate 5-phosphatase
YPL085W	SEC16_____	+1.06	119871	127180	secretion	vesicle coat component
YPR176C	BET2______	-1.06	657633	620098	protein processing	geranylgeranyltransferase type II beta subunit
YBR157C	ICS2______	+1.13	140823	158697	Cu2+ ion homeostasis (putative)	unknown
YCR094W	CDC50_____	+1.07	257212	275154	cell cycle	unknown
YDR029W	__________	-1.01	113849	112267	unknown	unknown
YDR394W	RPT3______	+1.21	768305	927181	protein degradation	26S proteasome subunit
YER090W	TRP2______	+1.08	757861	821468	tryptophan biosynthesis	anthranilate synthase component I
YGL087C	MMS2______	+1.48	330387	489335	DNA repair, postreplication	unknown
YGR194C	XKS1______	+1.26	212461	267891	xylulose utilization	xylulokinase
YHR211W	FLO5______	-1.25	289172	231688	flocculation	flocculin, similar to Flo1p
YJL088W	ARG3______	+1.70	257863	438691	arginine biosynthesis	ornithine carbamoyltransferase
YKL085W	MDH1______	+1.30	696632	905219	TCA cycle	malate dehydrogenase
YLR020C	__________	-1.01	136929	135959	unknown	unknown; similar to triacylglycerol lipase
YLR392C	__________	+1.14	175200	199608	unknown	unknown
YMR126C	__________	+1.08	276297	297327	unknown	unknown
YNL179C	__________	-2.12	423757	200263	unknown	unknown
YOL085C	__________	-1.10	131388	119120	unknown	unknown
YOR297C	TIM18_____	+1.09	349581	379316	mitochondrial protein targeting	inner membrane translocase component
YPL273W	SAM4______	-1.20	1671457	1394515	sulfur amino acid metabolism	S-adenosylmethionine:homocysteine S-methyltransferase
YAL004W	__________	-1.15	144717	125465	unknown	unknown
YBR169C	SSE2______	+1.16	321456	372108	heat shock response	HSP70 family
YCR106W	__________	-2.05	306096	149542	unknown	unknown; similar to transcription factors
YDR040C	ENA1______	-1.04	420375	405450	transport	plasma membrane ATPase
YDR407C	TRS120____	-1.05	503437	480940	secretion (putative)	transport protein particle (TRAPP) subunit, 120 kD
YER102W	RPS8B_____	+1.22	15942991	19451794	protein synthesis	ribosomal protein S8B
YGL100W	SEH1______	-1.32	1020026	773996	nuclear protein targeting	nuclear pore protein
YGR207C	__________	+1.14	773320	880666	unknown	electron-transferring flavoprotein, beta chain (putative)
YIL004C	BET1______	-1.06	380060	357481	secretion	vesicle recycling; SNARE
YJL101C	GSH1______	-1.07	416763	389359	glutathione biosynthesis	gamma-glutamylcysteine synthetase
YKL096W	CWP2______	+1.31	15877377	20850363	unknown	cell wall protein
YLR033W	__________	-1.06	226803	214178	unknown	involved in temperature-sensitive growth and in pheromone response pathway
YLR405W	__________	-1.28	459915	359929	unknown	unknown
YMR138W	CIN4______	-1.20	246409	205997	mitosis, chromosome segregation	GTP-binding protein
YNL192W	CHS1______	+1.05	101318	105903	cytokinesis	chitin synthase
YOL098C	__________	-1.35	875040	649085	unknown	unknown
YOR308C	SNU66_____	-1.21	174746	144829	mRNA splicing (putative)	U4/U6.U5 snRNP protein
YPR003C	__________	+1.05	151087	158934	unknown	unknown; similar to Sul1p and sulfate transporters from
YBL098W	__________	-1.27	226134	177845	unknown	unknown; similar to bacterial NADP/NAD-dependent
YCL003W	__________	-1.04	132594	127682
YDL100C	__________	+1.06	466804	495050	unknown	unknown; similar to E. coli arsenical pump-driving ATPase
YDR223W	__________	-1.10	123465	112135	unknown	unknown
YEL004W	YEA4______	-1.05	145973	139260	unknown	unknown; similar to GOG5, a gene involved in vanadate
YFR023W	PES4______	-1.04	106431	101925	DNA replication	unknown; suppresses DNA polymerase epsilon mutation
YHR040W	__________	-1.45	302255	208950	unknown	unknown; similar to Hit1p, expressed under
YIR011C	STS1______	+1.24	502027	622928	nuclear protein targeting	Rna15 transport factor
YJR067C	YAE1______	-1.36	290148	212600	unknown	unknown
YKR064W	__________	-1.02	111035	109065	unknown	unknown; similar to transcription factors, has Zn[2]-Cys[6]
YLR221C	__________	-1.79	821769	460127	unknown	unknown
YML091C	RPM2______	+1.03	490414	507111	tRNA processing, mitochondrial	RNase P subunit
YNL004W	HRB1______	-1.10	496624	450995	unknown	RNA binding protein (putative)
YNR043W	MVD1______	-1.96	1711251	873357	sterol metabolism	mevalonate pyrophosphate decarboxylase
YOR122C	PFY1______	+1.12	2796281	3141116	cytoskeleton	profilin
YPL098C	__________	-1.09	555356	507191	unknown	unknown
YPR189W	SKI3______	-1.04	126979	122359	mRNA decay and virus resistance	unknown
YAL017W	FUN31_____	-1.03	352288	340847	unknown	putative protein kinase
YBR181C	RPS6B_____	+1.02	15916150	16279105	protein synthesis	ribosomal protein S6B
YCRX11W	__________	-1.27	224415	177081
YDR052C	DBF4______	-1.17	180740	154759	cell cycle	Cdc7p (kinase) regulator
YDR419W	RAD30_____	-1.08	123889	114438	DNA repair	unknown
YER114C	BOI2______	-1.34	206133	153398	bud emergence	binds Bem1p
YGL112C	TAF60_____	-1.11	407623	366520	transcription	TFIID 60 kD subunit
YGR219W	__________	+1.00	303078	303156	unknown	unknown
YIL015W	BAR1______	+1.01	116488	117819	mating	alpha-factor degradation
YJL113W	__________	+1.00	101055	101348	unknown	unknown
YKL109W	HAP4______	-1.33	265976	200094	transcription	component of heterotrimeric CCAAT-binding factor
YLR043C	TRX1______	+1.51	1625260	2454505	DNA replication	thioredoxin I
YLR415C	__________	-1.05	114202	109200	unknown	unknown
YMR150C	IMP1______	+1.27	342451	434464	protein processing	mitochondrial inner membrane protease

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YNL204C	SPS18_____	-1.01	131109	129737	sporulation	unknown
YOL108C	INO4______	+1.08	263819	285668	phospholipid biosynthesis	transcription factor
YOR320C	__________	+1.11	534184	593740	unknown	unknown
YPR015C	__________	-1.02	166614	162819	unknown	unknown; similar to human GT box-binding protein
YBL108W	__________	-1.08	108797	101011	unknown	unknown
YCL016C	__________	-1.10	163849	148296	unknown	unknown
YDL112W	TRM3______	-1.02	100894	98595	tRNA processing	tRNA robose methylase
YEL016C	__________	+1.09	146036	159632	unknown	unknown; similar to Ycr026p
YFR033C	QCR6______	+1.04	1526988	1580569	oxidative phosphorylation	ubiquinol cytochrome-c reductase subunit
YGR038W	ORM1______	-1.10	524148	477708	unknown	unknown
YHR051W	COX6______	-1.02	917169	900254	oxidative phosphorylation	cytochrome-c oxidase subunit VI
YIR021W	MRS1______	-1.09	169267	154957	mRNA splicing, COB mRNA	unknown
YJR079W	__________	+1.01	109032	109764	unknown	unknown
YKR076W	ECM4______	+1.84	142303	261359	cell wall biogenesis	unknown
YLR231C	__________	-1.21	320842	264217	unknown	unknown; similar to rat kynureninase (PIR:PS0370)
YML101C	__________	+1.12	326251	366278	unknown	unknown
YNL016W	PUB1______	-1.17	2316873	1976231	mRNA processing	poly(A)+ RNA-binding protein
YNR055C	HOL1______	-1.21	781290	647847	transport	(putative) multidrug resistance permease
YOR134W	BAG7______	-1.02	166037	162318	signaling	GTPase activating protein
YPL110C	__________	-1.03	105199	102059	unknown	unknown; similar to Pho81p
YPR201W	ARR3______	-1.24	190431	153426	arsenic resistance	arsenite transporter
YAL028W	__________	-1.01	147242	145311	unknown	unknown
YBR193C	MED8______	-1.02	147845	144514	transcription	RNA polymerase II mediator subunit
YDR064W	RPS13_____	-1.22	5796198	4735106	protein synthesis	ribosomal protein S13
YDR431W	__________	-1.09	125877	116007	unknown	unknown
YER125W	RSP5______	-1.27	445539	352054	protein degradation, ubiquitin-mediated	ubiquitin-protein ligase (E3 enzyme)
YGL124C	MON1______	+1.04	171758	178368	secretion (putative)	unknown; brefeldin A sensitive; monensin sensitive
YGR231C	PHB2______	+1.32	912141	1207169	aging	prohibitin homolog
YIL027C	__________	-1.05	248198	235712	unknown	unknown
YJL125C	GCD14_____	-1.28	479786	375096	protein synthesis	translation repressor of GCN4
YKL121W	__________	+1.08	111099	120097	unknown	unknown
YLR055C	SPT8______	-1.16	794993	685307	chromatin structure	histone acetyltransferase complex subunit
YLR425W	TUS1______	+1.09	177351	192519	unknown	unknown; interacts with Sec1p
YMR160W	__________	-1.00	116993	116934	unknown	unknown
YNL216W	RAP1______	+1.01	208530	209599	transcription	transcriptional repressor and activator
YOL120C	RPL18A____	-1.24	14182354	11414139	protein synthesis	ribosomal protein L18A
YOR332W	VMA4______	+1.29	3476605	4467562	vacuolar acidification	vacuolar H+-ATPase V1 domain 27 KD subunit
YPR027C	__________	-1.09	237977	217398	unknown	unknown; similar to Ynl019p and Ynl033p
YBR007C	__________	+1.14	212553	242693	unknown	unknown
YCL028W	RNQ1______	-1.16	846196	727961	unknown	unknown; "transferable epigenetic modifier"
YDL124W	__________	+3.19	606463	1933390	unknown	unknown
YEL027W	CUP5______	+1.07	3852588	4119468	ATP synthesis	vacuolar ATP synthase subunit
YFR044C	__________	-1.05	1256159	1192313	unknown	unknown; similar to Ybr281p
YGR045C	__________	-1.00	114983	114780	unknown	unknown
YHR062C	RPP1______	-1.52	465645	306245	rRNA and tRNA processing	RNase P and RNase MRP subunit
YIR032C	DAL3______	+1.02	115825	118072	purine metabolism	ureidoglycolate hydrolase
YJR092W	BUD4______	-1.01	124156	123135	bud site selection, axial	unknown
YKR088C	__________	+1.17	484361	567607	unknown	unknown
YLR243W	__________	-1.25	542991	433889	unknown	unknown
YML112W	CTK3______	-1.04	376521	360483	cell cycle (putative)	protein kinase subunit
YNL028W	__________	-1.02	117729	115891	unknown	unknown
YNR067C	__________	+1.62	382700	619282	unknown	unknown
YOR144C	EFD1______	+1.03	146817	150559	recombination (putative)	unknown
YPL122C	TFB2______	-1.14	326977	285980	transcription	TFIIH 55 kD subunit
YAL038W	CDC19_____	-1.37	12224286	8942461	glycolysis	pyruvate kinase
YBR205W	KTR3______	-1.31	704931	539188	protein glycosylation	putative alpha-1,2-mannosyltransferase
YDR076W	RAD55_____	-1.12	208143	186341	DNA repair and recombination	RecA homolog
YDR443C	SSN2______	-1.19	1119434	944311	transcription	RNA polymerase II mediator subunit
YER137C	__________	-1.11	130126	116941	unknown	unknown
YGL136C	__________	+1.16	294943	343198	unknown	unknown; similar to E. coli ftsJ protein
YGR243W	__________	-1.01	341411	337617	unknown	unknown
YIL039W	__________	+1.15	585932	673666	unknown	unknown
YJL137C	GLG2______	+1.26	182699	229304	glycogen metabolism	glycogen synthesis initiator
YKL133C	__________	+1.31	127706	167001	unknown	unknown
YLR067C	PET309____	+1.07	98837	106051	RNA processing	COX1 mRNA stability
YLR437C	__________	-1.02	1078454	1056191	unknown	unknown
YMR172W	HOT1______	+1.04	186354	193269	osmotic stress response (putative)	unknown; nuclear protein; similar to Msn1p
YNL228W	__________	-1.25	431994	344445	unknown	unknown
YOL132W	__________	-1.15	138228	119892	unknown	unknown; similar to glycophospholipid-anchored surface glycoprotein GAS1
YPR039W	__________	-1.18	183895	156426	unknown	unknown
YBR017C	KAP104____	-1.27	263482	207560	nuclear protein targeting	beta-karyopherin
YCL040W	GLK1______	+6.71	237852	1595225	glycolysis	glucokinase
YDL134C	PPH21_____	+1.15	993518	1139955	cell cycle	protein phosphatase 2A
YDR259C	YAP6______	-1.02	149316	146230	salt tolerance	basic leu zipper transcription factor
YEL039C	CYC7______	-2.03	528773	260422	respiration	cytochrome c (isoform 2)
YFR056C	__________	-1.20	132309	110382	unknown	unknown
YGR057C	LST7______	+1.03	122789	126579	secretion	unknown; post-Golgi
YHR072W	ERG7______	-1.34	306394	229333	sterol metabolism	lanosterol synthase
YIR044C	__________	-1.04	164018	158169	unknown	unknown
YJR103W	URA8______	-1.02	339482	333868	pyrimidine biosynthesis	CTP synthase
YKR100C	__________	-1.19	358952	301845	unknown	unknown
YLR255C	__________	+1.03	107081	109775	unknown	unknown
YML123C	PHO84_____	+1.66	2488620	4122435	transport	inorganic phosphate permease
YNL038W	__________	-1.03	403338	391400	unknown	unknown
YOR156C	NFI1______	-1.02	345389	339244	unknown	interacts with Cdc12p in 2-hybrid assay
YPL134C	ODC1______	-1.01	190277	188303	unknown	unknown; similar to mitochondrial ADP/ATP carrier proteins
YAL049C	__________	-1.12	477721	426008	unknown	unknown
YBR217W	APG12_____	-1.12	220896	197974	autophagy	unknown
YDR088C	SLU7______	+1.01	258160	259973	mRNA splicing	3' splice site selection
YDR455C	__________	-1.14	129838	114229	unknown	unknown
YER146W	LSM5______	-1.38	743854	539206	mRNA splicing (putative)	unknown; similar to snRNA-associated protein
YGL148W	ARO2______	-1.20	1775196	1484885	aromatic amino acid biosynthesis	chorismate synthase
YGR255C	COQ6______	+1.45	341915	495455	ubiquinone biosynthesis	monooxygenase
YIL051C	MMD1______	+1.33	4662069	6223817	maintenance of mitochondrial DNA	unknown
YJL149W	__________	+1.36	236630	322202	unknown	unknown
YKL145W	RPT1______	+1.05	971375	1016910	protein degradation, ubiquitin-mediated	26S proteasome subunit
YLR079W	SIC1______	+1.33	445640	592809	cell cycle	Cdc28p-Clb5 protein kinase inhibitor
YLR449W	FPR4______	-1.77	2308240	1303006	protein folding (putative)	similar to peptidyl-prolyl cis-trans isomerase
YMR182C	RGM1______	-1.45	304354	210361	transcription	putative repressor
YNL240C	NAR1______	-1.25	232743	185716	nuclear organization and biogenesis (putative)	unknown; similar to human Narf

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YOL144W	NOP8______	-1.21	565831	465854	ribosome biogenesis (putative)	unknown; nucleolar protein
YOR354C	__________	+1.05	364207	384000	unknown	unknown
YPR051W	MAK3______	+1.07	463963	496128	viral propagation	L-A virus GAG protein N-acetyltransferase
YBR029C	CDS1______	-1.19	137321	115307	lipid metabolism	CDP-diacylglycerol synthase
YCL052C	PBN1______	-1.07	325084	302750	protein degradation	protease B
YDL146W	__________	-1.12	146838	131454	unknown	unknown
YDR267C	__________	-1.69	393551	233160	unknown	unknown; similar to Sec13p and other proteins with WD
YEL051W	VMA8______	+1.10	1880394	2062642	vacuolar acidification	vacuolar H+-ATPase V1 domain D subunit
YGR069W	__________	-1.55	490024	315984	unknown	unknown
YHR083W	__________	-1.03	606743	588364	unknown	unknown
YJR115W	__________	-1.04	604112	583633	unknown	unknown
YLR263W	RED1______	-1.28	155354	121333	meiosis, synapsis	synaptonemal complex component (putative)
YMR002W	__________	+1.42	1278734	1813576	unknown	unknown
YNL050C	__________	-1.04	498030	477218	unknown	unknown
YOR168W	GLN4______	-1.47	606220	412224	protein synthesis	tRNA synthetase, glutaminyl
YPL146C	__________	-1.27	926735	729204	unknown	unknown
YAL063C	FLO9______	-1.22	295908	243396	flocculation	cell wall protein
YBR229C	ROT2______	-1.01	228310	226319	cytoskeleton	glucosidase II
YDR467C	__________	+1.16	238300	275884	unknown	unknown
YER157W	SEC34_____	-1.16	256909	220885	secretion	Golgi protein retention
YGL160W	__________	-1.02	166742	163725	unknown	unknown
YGR267C	FOL2______	-1.18	891756	755406	folate biosynthesis	GTP cyclohydrolase I
YIL063C	YRB2______	+1.17	731785	854841	nuclear export	Ran-GTPase-binding protein
YJL161W	__________	+2.36	136955	323752	unknown	unknown
YKL157W	APE2______	+1.40	359852	505271	protein degradation	aminopeptidase yscII
YLR091W	__________	-1.03	124646	120782	unknown	unknown
YLR461W	PAU4______	+1.07	319917	341893	unknown	unknown; seripauperin family
YNL252C	MRPL17____	+1.01	337535	341087	protein synthesis	ribosomal protein, mitochondrial L17
YOL156W	HXT11_____	-1.19	195588	164258	transport	hexose permease
YOR366W	__________	-1.05	165927	158082	unknown	unknown
YPR063C	__________	+1.14	613689	700748	unknown	unknown
YBR041W	FAT1______	-1.13	126270	111411	transport	long-chain fatty acid transporter
YCL064C	CHA1______	+1.08	1961435	2114286	hydroxy amino acid metabolism	L-serine/L-threonine deaminase
YDL158C	__________	-1.19	132863	111956	unknown	unknown
YDR279W	__________	-1.08	267568	246923	unknown	unknown
YEL062W	NPR2______	-1.04	146920	141565	nitrogen transport	transcription factor
YGR081C	__________	-1.41	701481	497860	unknown	unknown; similar to chicken myosin heavy chain PIR:A29320
YHR095W	__________	-1.58	302394	191377	unknown	unknown
YJR127C	ZMS1______	+1.02	520595	531942	unknown	unknown; similar to Adr1p and Yml081p
YLR275W	SMD2______	-1.05	294058	281361	mRNA splicing	U1 snRNP protein
YMR014W	__________	-1.40	724632	516375	unknown	unknown
YNL060C	__________	-1.30	1037662	799876
YOR180C	DCI1______	-1.06	160282	150601	fatty acid metabolism	delta(3,5)-delta(2,4)-dienoyl-CoA isomerase
YPL158C	__________	+1.03	288118	295864	unknown	unknown
YAR009C	__________	-1.09	106435	97265	unknown	unknown
YBR241C	__________	+1.10	130879	144533	unknown	unknown; similar to sugar permeases
YDR110W	FOB1______	-1.29	213519	164906	DNA replication(putative)	fork blocking protein
YDR479C	__________	+1.04	242705	252338	unknown	unknown
YER166W	__________	-1.13	116108	102318	unknown	unknown; similar to members of the Drs2p family of P-type
YGL172W	NUP49_____	-1.15	257629	223689	nuclear protein targeting	nuclear pore protein
YGR279C	SCW4______	+1.82	5617815	10215250	cell wall biogenesis	glucanase (putative)
YIL072W	HOP1______	-1.16	213298	183600	meiosis, synapsis	DNA binding protein
YJL173C	RFA3______	+1.10	635814	700904	DNA replication	replication factor A, 13 kD subunit
YKL169C	__________	-1.02	372487	365671	unknown	unknown
YLR103C	CDC45_____	-1.07	200946	188431	DNA replication	pre-replicative complex subunit (putative)
YMR205C	PFK2______	-1.35	1129424	837599	glycolysis	phosphofructokinase
YNL264C	PDR17_____	+1.10	340422	374275	drug resistance	unknown
YOR002W	ALG6______	-1.13	719954	637454	protein glycosylation	glucosyltransferase
YOR378W	__________	-1.08	155028	143006	unknown	unknown; similar to members of major facilitator superfamily
YPR075C	OPY2______	+1.06	453600	482735	signaling (putative)	pheromone pathway
YBR053C	__________	+2.18	242386	528740	unknown	unknown; similar to rat calcium-binding protein regucalcin
YCLX03C	__________	+1.11	100418	111537
YDL170W	UGA3______	+1.14	187389	212869	transcription	activator of GABA catabolic genes
YDR291W	__________	-1.05	150970	143658	unknown	unknown; similar to Sgs1p and other DNA helicases
YEL074W	__________	-1.45	255836	175914	unknown	unknown
YGR093W	__________	-1.28	401325	312688	unknown	unknown
YHR107C	CDC12_____	-1.16	1093025	938929	cytokinesis	septin
YJR139C	HOM6______	+1.16	2361807	2732006	methionine and threonine biosynthesis	homoserine dehydrogenase
YLR287C	__________	-1.24	415194	334926	unknown	unknown
YMR026C	PEX12_____	+1.08	337511	363614	peroxisome biogenesis	integral membrane protein
YNL072W	RNH35_____	-1.18	314934	266665	DNA replication (putative)	ribonuclease H
YOR192C	__________	-1.06	240315	227705	unknown	putative thiamine transporter
YPL170W	__________	+1.04	121200	125631	unknown	unknown
YAR031W	__________	+1.20	209478	250995	unknown	unknown; similar to subtelomerically-encoded proteins
YBR253W	SRB6______	+1.21	361646	436110	transcription	RNA polymerase mediator subunit
YDR122W	KIN1______	+1.01	196049	198889	unknown	protein kinase
YDR491C	__________	-1.10	141378	128333	unknown	unknown; similar to Hrd312p
YER177W	BMH1______	+1.39	5218475	7239947	unknown	unknown; similar to mammalian 14-3-3 proteins
YGL184C	STR3______	+1.19	232008	275354	methionine biosynthesis	cystathionine beta-lyase
YGR291C	__________	+1.03	120309	123831	unknown	unknown
YIL083C	__________	+1.20	368104	441607	unknown	unknown
YJL185C	__________	+1.16	255258	295083	unknown	unknown
YKL181W	PRS1______	-1.29	2252167	1749285	purine, pyrimidine, tryptophan and histidine biosynthesis	phosphoribosylpyrophosphate synthetase
YLR115W	CFT2______	-1.19	214588	180695	mRNA 3'-end processing	cleavage/polyadenylation factor CF II component
YMR217W	GUA1______	-2.04	5322860	2610932	purine metabolism	GMP synthase
YNL276C	__________	+1.21	176589	213042	unknown	unknown
YOR014W	RTS1______	+1.18	429995	507986	stress response	protein phosphatase 2A B-type regulatory subunit
YOR390W	__________	-1.40	485198	346532	unknown	unknown
YPR087W	__________	-1.09	1700578	1559750	unknown	unknown
YBR065C	ECM2______	-1.19	140033	117707	cell wall biogenesis and mRNA splicing (putative)	unknown
YCR003W	MRPL32____	-1.00	132392	131928	protein synthesis	ribosomal protein, mitochondrial L32
YDL182W	LYS20_____	-1.32	3248643	2460797	lysine biosynthesis	homocitrate synthase
YDR303C	__________	-1.19	311052	260350	unknown	unknown; similar to transcription factors
YER007W	PAC2______	-1.08	180078	167425	mitosis	unknown; microtubule stability
YGR105W	VMA21_____	+1.02	362581	369193	vacuolar acidification	vacuolar H+-ATPase assembly protein
YHR119W	SET1______	+1.16	864797	999053	transcription	trithorax protein family
YJR151C	__________	+1.02	196100	200803	unknown	unknown
YLR298C	YHC1______	+1.10	277228	303774	mRNA splicing	U1 snRNP protein
YMR037C	MSN2______	+1.01	210951	212039	stress response	transcriptional activator
YNL084C	END3______	+1.06	646458	684349	endocytosis	actin cytoskeleton regulatory complex component

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YOR202W	HIS3______	-1.02	809306	795177	histidine biosynthesis	imidazoleglycerol-phosphate dehydratase
YPL182C	__________	-1.18	157170	133012	unknown	unknown
YBL004W	__________	+1.08	159199	172241	unknown	unknown; major facilitator superfamily
YBR265W	TSC10_____	-1.28	438511	342398	sphingolipid biosynthesis	3-ketosphinganine reductase
YDL004W	ATP16_____	+1.94	677932	1317954	ATP synthesis	F1F0-ATPase subunit
YDR134C	__________	+1.33	15706281	20932440	unknown	unknown
YDR503C	LPP1______	+1.26	299519	378116	phospholipid metabolism	lipid phosphate phosphatase
YFL002C	SPB4______	-1.26	457017	363580	rRNA processing, 25S	RNA helicase
YGL196W	__________	+1.04	294026	305057	unknown	unknown
YHL003C	LAG1______	-1.35	400540	297282	aging	unknown
YIL095W	PRK1______	+1.10	377911	415030	unknown	protein kinase
YJL197W	UBP12_____	-1.16	159968	138478	protein degradation, ubiquitin-mediated	ubiquitin-specific protease
YKL193C	SDS22_____	+1.27	252457	320832	glucose repression	Glc7p regulatory subunit
YLR127C	APC2______	-1.11	131507	118542	mitosis	anaphase promoting complex subunit
YML004C	GLO1______	+1.38	767872	1056977	amino acid metabolism	glyoxalase I
YMR229C	RRP5______	-1.97	1949532	990588	rRNA processing	unknown; required for pre-rRNA cleavage
YNL286W	CUS2______	-1.20	292412	243962	mRNA splicing, putative	unknown
YOR026W	BUB3______	+1.06	394492	419348	cell cycle, checkpoint	unknown
YPL004C	__________	+1.38	928599	1278780	unknown	unknown; similar to tropomyosin
YPR099C	__________	-1.11	802483	722656	unknown	unknown
YBR077C	__________	+1.26	200609	253311	unknown	unknown
YCR015C	__________	+1.02	130988	134159	unknown	unknown
YDL194W	SNF3______	-1.06	109832	103779	transport	glucose permease
YDR315C	IPK1______	+1.30	132831	172604	signaling (putative)	inositol(1,4,5)P3 6-kinase
YER017C	AFG3______	+1.01	213245	216311	protein degradation	mitochondrial metalloprotease
YGL004C	__________	+1.03	100522	103489	unknown	unknown
YGR115C	__________	-1.49	188599	126731	unknown	unknown; similar to Sly41p, questionable ORF
YHR131C	__________	-1.01	444449	438992	unknown	unknown
YJL004C	SYS1______	+1.01	334042	336041	secretion (putative)	unknown; overexpression suppresse mutation in ypt6
YKL004W	AUR1______	-1.34	1242054	928748	sphingolipid metabolism	phosphatidylinositol:ceramide phosphoinositol transferase
YLL004W	ORC3______	-1.11	156880	141805	DNA replication	origin recognition complex, 62 kDa subunit
YLR310C	CDC25_____	-1.00	511018	510559	signaling	GDP/GTP exchange factor for Ras1p and Ras2p
YMR048W	__________	-1.16	199856	172258	unknown	unknown
YNL096C	RPS7B_____	-1.32	8916810	6730906	protein synthesis	ribosomal protein S7B
YOL004W	SIN3______	-1.05	374934	357323	transcription	transcriptional regulator
YOR214C	__________	-1.13	118939	105618	unknown	unknown
YPL193W	RSA1______	-1.45	237620	163474	ribosome biogenesis (putative)	unknown
YAR060C	__________	-1.75	214160	122459	unknown	identical to Yhr2p
YBL014C	RRN6______	-1.06	149451	141149	transcription	component of rDNA transcription factor complex
YBR277C	__________	+1.04	153003	159093	unknown	unknown
YDL016C	__________	+1.02	396911	406496	unknown	unknown
YDR146C	SWI5______	-1.02	152900	149487	cell cycle	transcription factor, regulates HO
YDR515W	SLF1______	-1.10	241760	220028	Cu2+ ion homeostasis	CuS biomineralization
YGL208W	SIP2______	+1.03	206640	212228	transcription	component of Snf1 protein complex
YHL012W	__________	+1.13	161803	183603	unknown	unknown; similar to UTP glucose-1-phosphate
YIL106W	MOB1______	+1.33	354209	469920	mitosis	unknown; binds Mps1p and Dbf2p
YJL209W	CBP1______	-1.02	260419	256471	mRNA stability, COB mRNA	unknown
YKL205W	LOS1______	-1.29	917370	708430	tRNA splicing	nuclear pore protein
YLR139C	SLS1______	-1.05	163857	155678	mitochondrial metabolism	integral membrane protein
YML013W	__________	+1.08	144121	155558	unknown	unknown
YMR241W	YHM2______	+1.02	622755	637293	unknown	suppresses HM mutant
YNL298W	CLA4______	+1.01	901536	906091	cytokinesis	protein kinase
YOR038C	HIR2______	+1.03	153221	157285	transcription	histone transcription inhibitor
YPL016W	SWI1______	-1.08	110634	102503	transcription	component of SWI/SNF global activator complex
YPR111W	DBF20_____	-1.01	150133	148510	cell cycle	M phase; protein kinase
YBR088C	POL30_____	+1.13	370876	417846	DNA replication	DNA polymerase processivity factor
YCR025C	__________	-1.07	131804	123248	unknown	unknown
YDL206W	__________	+1.03	140487	144626	unknown	unknown; similar to transporter proteins
YDR325W	YCG1______	-1.22	211427	173450	mitosis, chromosome condensation (putative)	unknown; high copy suppressor of brn1 mutation
YER028C	__________	-1.01	167327	165000	unknown	unknown; similar to Mig2p
YGL016W	KAP122____	-1.35	327013	241458	drug resistance	karyopherin-beta family protein
YGR127W	__________	-1.04	289988	279621	unknown	unknown; similar to mouse T10 protein PIR:S37448
YHR141C	RPL42B____	-1.37	13368650	9740196	protein synthesis	ribosomal protein L42B
YJL016W	__________	+1.33	303777	403109	unknown	unknown
YKL015W	PUT3______	-1.12	280199	249912	transcription	positive regulator of PUT genes
YLL016W	SDC25_____	-1.31	165884	126795	signaling (putative)	GDP/GTP exchange factor for Ras
YLR321C	SFH1______	-1.30	378799	291667	chromatin structure	chromatin remodeling complex subunit
YMR058W	FET3______	-2.36	574317	243677	transport	cell surface ferroxidase
YNL108C	__________	-1.45	555138	383023	unknown	unknown
YOL016C	CMK2______	+1.34	778326	1040943	signaling	calmodulin-dependent protein kinase
YOR226C	ISU2______	-1.00	378202	378027	iron homeostasis	unknown; similar to iron-sulfur cluster protein nifU
YPL205C	__________	-1.52	179471	117977	unknown	unknown
YBL026W	LSM2______	+1.03	452834	468512	mRNA splicing	core snRNP protein
YBR289W	SNF5______	+1.03	3203810	3284345	transcription	component of SWI/SNF global activator complex
YDL028C	MPS1______	-1.11	214457	193189	mitosis, checkpoint	protein kinase
YDR158W	HOM2______	-1.29	1346868	1043879	threonine and methionine biosynthesis	aspartate-semialdehyde dehydrogenase
YDR527W	__________	-1.06	276611	260034	unknown	unknown
YGL220W	__________	-1.02	683642	673450	unknown	unknown; similar to Vibrio alginolyticus bolA protein
YHL024W	RIM4______	-1.06	137246	129808	sporulation (putative)	unknown; N-terminus has putative RNA binding domain
YIL118W	RHO3______	+1.04	102910	107158	cytoskeleton	GTP-binding protein, rho family
YJL221C	FSP2______	+1.21	154551	187036	unknown	unknown; similar to maltase
YKL217W	JEN1______	+1.10	112146	122997	transport	lactate transporter
YLR151C	PCD1______	+1.02	121630	123827	unknown	nudix hydrolase family
YMR253C	__________	-1.03	105750	103013	unknown	major facilitator superfamily
YNL310C	__________	+1.13	394606	445336	unknown	unknown
YOR050C	__________	+1.03	187094	193114	unknown	unknown
YPL028W	ERG10_____	+1.02	2550322	2596347	sterol metabolism	acetoacetyl CoA thiolase
YPR123C	__________	-1.07	161856	151694	unknown	unknown
YBR099C	__________	-1.05	143576	137376	unknown	unknown
YCR036W	RBK1______	+1.15	127967	147016	ribose metabolism	ribokinase
YDL218W	__________	-1.29	162789	125859	unknown	unknown
YDR337W	MRPS28____	-1.23	396695	323396	protein synthesis	ribosomal protein, mitochondrial S28
YER039C	HVG1______	+1.01	143398	145419	protein glycosylation (putative)	nucleotide sugar transporter (putative)
YGL028C	SCW11_____	-1.13	729422	643555	cell wall biogenesis	glucanase (putative)
YGR139W	__________	-1.07	165380	154313	unknown	unknown
YHR152W	SPO12_____	-1.09	531046	489224	meiosis; mitotic cell cycle	unknown
YJL028W	__________	-1.61	229775	142712	unknown	unknown
YKL027W	__________	-1.11	516023	465779	unknown	unknown; similar to E. coli molybdopterin-converting factor
YLL028W	TPO1______	-1.16	317361	272732	transport	polyamine transport protein
YLR333C	RPS25B____	-1.03	14935435	14494609	protein synthesis	ribosomal protein S25B

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YMR070W	MOT3______	-1.16	376103	324571	mating	transcriptional regulator of pheremone-responsive genes
YNL120C	__________	-1.31	207072	158260	unknown	unknown
YOL028C	YAP7______	-1.37	240639	175680	transcription	basic leucine zipper transcription factor
YOR238W	__________	+1.16	365472	422604	unknown	unknown
YPL217C	BMS1______	-1.56	1367200	879061	unknown	unknown; essential
YBL038W	MRPL16____	-1.07	108836	101466	protein synthesis	ribosomal protein, mitochondrial L16
YBR301W	__________	+1.11	263658	293628	unknown	unknown; similar to Ykl224p and other members of the PAU1
YDL040C	NAT1______	-1.23	355294	289759	protein processing	protein N-acetyltransferase subunit
YDR170C	SEC7______	-1.36	660651	484299	secretion	vesicle coat component
YDR539W	__________	-1.11	333023	300461	unknown	unknown
YFL033C	RIM15_____	-1.08	434500	402101	meiosis	protein kinase
YGL231C	__________	+1.24	713295	885372	unknown	unknown
YHL035C	__________	-1.74	1851332	1061025	unknown	unknown; ATP-binding cassette (ABC) superfamily
YIL130W	__________	-1.69	1014173	598871	unknown	unknown; similar to transcription factors
YJR009C	TDH2______	+1.35	15743220	21215198	glycolysis	glyceraldehyde-3-phosphate dehydrogenase 2
YKR004C	ECM9______	-1.05	749849	715627	cell wall biogenesis	unknown
YLR161W	__________	+1.51	498997	755341	unknown	unknown
YML035C	AMD1______	-1.05	336023	321456	protein glycosylation	alpha-mannosidase, putative
YMR265C	__________	-1.20	311563	259274	unknown	unknown
YNL322C	KRE1______	+1.41	836771	1177525	cell wall biogenesis	beta-1,6-glucan assembly
YOR062C	__________	+1.01	136660	138138	unknown	unknown
YPL040C	ISM1______	-1.18	252869	215103	protein synthesis	tRNA synthetase, mitochondrial, isoleucyl
YPR135W	CTF4______	+1.07	115835	124387	DNA replication	polymerase alpha binding protein
YBR110W	ALG1______	+1.03	312196	320218	protein glycosylation	beta-1,4-mannosyltransferase
YCR048W	ARE1______	-1.23	131188	106485	sterol metabolism	acyl-CoA sterol acyltransferase
YDL230W	PTP1______	-1.02	213904	209929	unknown	protein phosphatase
YDR349C	YPS7______	-1.15	460727	399744	protein degradation	GPI-anchored aspartic protease
YER049W	__________	-1.62	554006	341308	unknown	unknown
YGL040C	HEM2______	-1.26	555887	441606	heme biosynthesis	porphobilinogen synthase
YGR151C	__________	+1.07	261694	279707	unknown	unknown
YHR164C	DNA2______	+1.05	314324	330229	DNA replication	DNA helicase
YJL041W	NSP1______	-1.40	685571	488261	nuclear protein targeting	nuclear pore protein
YKL038W	RGT1______	-1.10	133926	121620	(glucose) transport	transcriptional regulator of glucose transporters
YLL040C	VPS13_____	+1.00	156889	157070	vacuolar protein targeting	component of peripheral membrane protein complex
YLR345W	__________	+1.58	164662	259458	unknown	unknown
YMR081C	ISF1______	-1.05	150020	142568	RNA splicing, mitochondrial	interacts with Nam7p
YNL132W	__________	-1.73	509459	294517	unknown	unknown; similar to Achlya ambisexualis antheridiol steroid
YOL040C	RPS15_____	+1.18	15769014	18594312	protein synthesis	ribosomal protein S15
YOR250C	CLP1______	+1.08	320477	346708	mRNA 3'-end processing	cleavage/polyadenylation factor CF IA component
YPL229W	__________	+1.40	849592	1186102	unknown	unknown
YBL050W	SEC17_____	-1.02	612507	599135	secretion	SNAP; vesicle fusion
YDL052C	SLC1______	-1.13	297595	263019	phospholipid metabolism	fatty acyltransferase
YFL043C	__________	+1.12	216867	243586	unknown	unknown
YGL243W	TAD1______	-1.01	219898	217604	tRNA processing	tRNA-specific adenosine deaminase
YIL142W	CCT2______	-1.27	1239690	978134	protein folding	cytoplasmic chaperonin complex
YJR020W	__________	+1.06	114570	121671	unknown	unknown
YKR016W	__________	+1.14	374523	425106	unknown	unknown
YLR173W	__________	+1.11	101930	113180	unknown	unknown
YML045W	__________	+1.30	3171099	4133841	unknown	unknown
YMR277W	FCP1______	-1.08	406985	375310	transcription	TFIIF interacting component of CTD phosphatase
YNL334C	SNO2______	-1.02	193800	190245	unknown	unknown; induced in stationary phase
YOR074C	CDC21_____	+1.09	499335	545084	DNA replication	thymidylate synthase
YPL052W	__________	+1.54	262333	404940	unknown	unknown
YPR145W	ASN1______	+1.07	1793353	1912699	asparagine biosynthesis	asparagine synthetase
YBR122C	MRPL36____	-1.16	315780	271712	protein synthesis	ribosomal protein, mitochondrial L36
YCR060W	__________	-1.12	305830	273024	unknown	unknown; similar to stress inducible protein Sti1p, has
YDL242W	__________	-1.18	113308	96080	unknown	unknown
YDR361C	__________	-2.10	890453	423733	unknown	unknown
YER060W	FCY21_____	-1.20	253041	211523	transport	purine-cytosine permease
YGL052W	__________	-1.11	191568	172458	unknown	unknown
YHR176W	__________	+1.09	116806	127594	unknown	unknown; similar to flavin-containing monooxygenases
YJL053W	PEP8______	+1.08	371753	402409	vacuolar protein targeting	vacuolar peripheral memebrane protein
YKL050C	__________	+1.06	103152	109487	unknown	unknown
YLL052C	AQY2______	-1.36	1534743	1131584	transport, water	aquaporin (putative)
YLR357W	RSC2______	-1.02	151829	149457	chromatin structure	chromatin remodeling complex subunit
YMR092C	AIP1______	-1.04	174643	167966	cytoskeleton	actin cortical patch component
YNL144C	__________	-1.03	165144	160732	unknown	unknown
YOL052C	SPE2______	-1.30	501520	386503	polyamine metabolism	S-adenosylmethionine decarboxylase
YOR262W	__________	-1.14	430786	376569	unknown	unknown
YPL241C	CIN2______	-1.03	268937	260224	mitosis, chromosome segregation	unknown
YBL062W	__________	+1.12	303971	340871	unknown	unknown
YDL064W	UBC9______	-1.20	738233	615836	protein degradation, ubiquitin-mediated	E2 ub.-conjugating enzyme
YDR191W	HST4______	-1.13	160729	142564	silencing (telomere)	unknown; similar to nuclear lamins
YFL055W	AGP3______	-1.17	128233	109831	transport	general amino acid permease
YGL255W	ZRT1______	-1.36	326359	239578	transport	high-affinity zinc transporter
YHR006W	STP2______	+1.48	216864	321589	tRNA splicing	unknown
YIL154C	(IMP2)____	+1.14	472258	539928	stress response	transcriptional repressor
YJR031C	GEA1______	-1.01	529749	523366	secretion	GDP/GTP exchange factor for ARF
YKR028W	SAP190____	-1.07	986506	918835	cell cycle	Sit4p-associated protein
YLR185W	RPL37A____	-1.20	9653563	8060234	protein synthesis	ribosomal protein L37A
YMR289W	__________	+1.01	233157	236181	unknown	unknown
YNR007C	AUT1______	+1.07	208617	223135	autophagy	unknown
YOR086C	__________	+1.34	775202	1036917	unknown	unknown
YPL062W	__________	-1.20	138418	115799	unknown	unknown
YPR157W	__________	+1.33	174589	231559	unknown	unknown
YBR134W	__________	-1.17	129016	110155	unknown	unknown
YCR071C	IMG2______	-1.01	257823	255256	mitochondrial DNA maintenance	unknown
YDR006C	SOK1______	+1.01	285016	286626	unknown	suppressor of a cAMP-dependent protein kinase mutant
YDR371W	__________	-1.05	238945	226744	unknown	unknown; similar to chitinases
YGL064C	__________	-1.14	187129	164223	unknown	unknown
YGR171C	MSM1______	-1.06	244354	231132	protein synthesis	tRNA synthetase, mitochondrial, methionyl
YHR188C	__________	+1.05	573590	600932	unknown	unknown
YJL065C	__________	-1.04	402319	386948	unknown	unknown; similar to DNA polymerase epsilon subunit c
YKL062W	MSN4______	+1.27	187642	238343	transcription	transcriptional activator with Snf1p
YLL064C	__________	+1.26	332328	417759	unknown	unknown; similar to members of the PAU1 family
YLR369W	SSQ1______	-1.01	263127	260603	DNA replication (mitochondrial)	mitochondrial HSP70
YMR104C	YPK2______	-1.21	142892	117622	unknown	protein kinase
YNL156C	__________	-1.12	479012	427036	unknown	unknown
YOL062C	APM4______	-1.02	547119	535233	secretion	vesicle coat component
YOR274W	MOD5______	+1.03	268286	277290	tRNA processing	tRNA isopentenyltransferase

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YPL252C	YAH1______	-1.27	792420	625805	unknown	unknown; similar to adrenodoxin and ferrodoxin
YMR319C	FET4______	-1.26	377570	298520	transport	iron transporter
YBL074C	AAR2______	-1.26	132124	105107	mRNA splicing, MATa1	unknown
YDL076C	__________	-1.01	288335	286482	unknown	unknown
YDR203W	__________	-1.07	159947	149030	unknown	unknown
YFL067W	__________	-3.14	512636	163120	unknown	unknown; similar to periodic clock protein
YGR004W	__________	-1.10	185464	169249	unknown	unknown
YHR018C	ARG4______	+1.11	575719	640439	arginine biosynthesis	argininosuccinate lyase
YIL165C	__________	+1.27	209148	265940	unknown	unknown; similar to nitrilases, putative pseudogene
YJR043C	POL32_____	-1.07	414776	389429	DNA replication	polymerase delta 55 kD subunit
YKR040C	__________	-1.64	479008	291878	unknown	unknown
YLR197W	SIK1______	-1.43	3799971	2666495	rRNA processing	nucleolar protein
YMR299C	__________	+1.16	221417	257242	unknown	unknown
YNR019W	ARE2______	-1.03	101890	98967	sterol metabolism	acyl-CoA sterol acyltransferase
YOR098C	NUP1______	-1.30	519379	400983	nuclear protein targeting	nuclear pore protein
YPL074W	YTA6______	+1.20	125728	151214	unknown	unknown; AAA ATPase family
YPR165W	RHO1______	+1.48	2828900	4184296	signaling	GTP-binding protein, rho family
YBR146W	MRPS9_____	-1.22	296885	243622	protein synthesis	ribosomal protein, mitochondrial S9
YCR084C	TUP1______	-1.27	645442	506329	transcription	general repressor
YDR018C	__________	-1.21	141336	117245	unknown	unknown; similar to Ybr042p
YDR383C	__________	-1.02	236166	231215	unknown	unknown
YER080W	__________	+1.04	447985	465971	unknown	unknown
YGL076C	RPL7A_____	-1.45	3555408	2443785	protein synthesis	ribosomal protein L7A
YGR183C	QCR9______	+1.12	754321	842292	oxidative phosphorylation	ubiquinol cytochrome-c reductase subunit 9
YHR200W	RPN10_____	+1.05	1519366	1589133	protein degradation	26S proteasome subunit
YJL077C	ICS3______	-1.04	362986	347892	Cu2+ ion homeostasis (putative)	unknown
YKL074C	MUD2______	-1.06	264822	248714	mRNA splicing	commitment complex component
YLR009W	__________	-1.30	2264546	1741599	protein synthesis	ribosomal protein L24B (putative)
YLR381W	__________	+1.01	250595	251974	unknown	unknown
YNL168C	__________	+1.02	327698	334018	unknown	unknown; similar to E. coli hpcE gene product which is
YOL074C	__________	-1.29	150306	116154
YOR286W	__________	-1.18	726051	612982	unknown	unknown; similar to Drosophila melanogaster heat shock
YPL262W	FUM1______	+1.33	878726	1170049	TCA cycle	fumarate hydratase
YBL086C	__________	-1.19	205545	172942	unknown	unknown
YDL088C	ASM4______	-1.16	299711	257290	unknown	unknown; suppresses ts mutations in pol3
YDR211W	GCD6______	-1.14	359212	315257	protein synthesis	translation initiation factor eIF2b subunit
YFR011C	__________	+1.15	409907	470878	unknown	unknown
YGR016W	__________	+1.03	168178	173749	unknown	unknown
YHR029C	__________	+1.36	388024	525879	unknown	unknown; similar to thymidylate synthase in the N-terminal
YIL176C	__________	+1.24	438485	543416	unknown	unknown; similar to members of the PAU1 family
YJR055W	HIT1______	+1.01	246567	248421	unknown	required for growth at high temperature
YKR052C	MRS4______	-1.03	245780	239734	transport	mitochondrial carrier
YLR209C	__________	+1.26	510523	643890	unknown	unknown; similar to human purine nucleoside phosphorylase
YML079W	__________	+1.29	670685	864358	unknown	unknown
YMR309C	NIP1______	-1.59	831922	522840	nuclear protein targeting	unknown, similar to NSR1
YNR031C	SSK2______	-1.15	313339	273369	signaling, high osmolarity pathway	MAPKKK (mitogen-activated protein kinase kinase kinase)
YOR110W	TFC7______	-1.07	431103	404048	transcription	TFIIIC subunit
YPL086C	ELP3______	-1.55	700599	452952	chromatin structure	histone acetyltransferase complex subunit
YPR177C	__________	-1.31	185329	141251	unknown	unknown
YBR158W	CST13_____	+1.12	1060015	1185172	Cu2+ ion homeostasis (putative); chromosome stability	unknown; required for optimal growth
YCR095C	__________	-1.04	312790	301101	unknown	unknown
YDR030C	RAD28_____	+1.05	128855	135481	DNA repair	unknown
YDR395W	SXM1______	-1.38	459847	332617	mRNA export; nuclear protein targeting	karyopherin
YER091C	MET6______	+1.06	286027	302703	methionine biosynthesis	homocysteine methyltransferase
YGL088W	__________	-1.32	181600	137800	unknown	unknown; similar to Cyanophora paradoxa ribosomal protein
YGR195W	SKI6______	-1.20	787857	655231	rRNA processing	exoribonuclease
YHR212C	__________	-1.26	171318	135987	unknown	unknown; identical to Yar060p/Raa19p
YJL089W	SIP4______	-1.06	135060	127464	glucose derepression	transcription factor
YKL086W	__________	+1.07	151609	162011	unknown	unknown
YLR021W	__________	-1.16	446281	385383	unknown	unknown
YLR393W	ATP10_____	-1.08	112994	104902	ATP synthesis	F1F0 ATPase complex assembly
YMR127C	SAS2______	-1.04	260864	250282	silencing	zinc-finger protein
YNL180C	RHO5______	+1.27	628011	799950	signaling	Rho family GTPase
YOL086C	ADH1______	+1.33	15806622	20988131	glycolysis	alcohol dehydrogenase I
YOR298W	__________	+1.06	474903	502114	unknown	meiosis (putative)
YPL274W	SAM3______	+1.10	192740	212080	transport, amino acid	high affinity S-adenosylmethionine permease
YAL005C	SSA1______	+1.13	2308259	2606231	ER and mitochondrial translocation	cytosolic HSP70
YBR170C	NPL4______	+1.21	219983	266876	nuclear protein targeting	nuclear pore protein
YCR107W	AAD3______	-1.14	283974	249714	unknown	hypothetical aryl-alcohol dehydrogenase
YDR041W	__________	+1.07	356193	381865	protein synthesis	ribosomal protein, mitochondrial
YDR408C	ADE8______	-1.05	830937	790369	purine biosynthesis	phosphoribosylglycinamide formyltransferase
YER103W	SSA4______	-1.34	566462	422888	ER and mitochondrial translocation	cytosolic HSP70
YGL101W	__________	-1.53	482606	315102	unknown	unknown
YGR208W	SER2______	-1.36	867298	637627	glycine, serine, and threonine metabolism	phosphoserine phosphatase
YIL005W	__________	+1.12	273666	306280	unknown	unknown; similar to protein disulfide
YJL102W	MEF2______	-1.06	143130	135356	protein synthesis	translation elongation factor, mitochondrial
YKL098W	__________	+1.13	234551	264995	unknown	unknown
YLR034C	SMF3______	+1.07	301046	320845	transport (putative)	metal transporter (putative)
YLR406C	RPL31B____	-1.13	146914	130170	protein synthesis	ribosomal protein L31B
YMR139W	RIM11_____	+1.22	302724	367812	meiosis	protein kinase
YNL193W	__________	-1.18	204901	173510	unknown	unknown
YOL099C	__________	+1.18	319356	375551	unknown	unknown
YOR309C	__________	-1.58	5863098	3704852	unknown	unknown
YPR004C	__________	+1.23	678247	833629	unknown	unknown; similar to human electron transport flavoprotein
YBL099W	ATP1______	+1.24	709330	880809	ATP synthesis	mitochondrial F1F0-ATPase subunit
YCL004W	PGS1______	-1.08	145638	135383	phospholipid metabolism	phosphatidylglycerophosphate synthase
YDL101C	DUN1______	-1.00	227508	226968	DNA repair	DNA damage-responsive protein kinase
YDR224C	HTB1______	-1.10	5478888	4979435	chromatin structure	histone H2B
YEL005C	VAB2______	+1.12	208403	233449	vacuolar protein targeting (putative)	unknown; Vac8p binding protein
YFR024C	__________	+1.10	502510	553650	unknown	unknown
YHR041C	SRB2______	-1.13	262594	233226	transcription	RNA polymerase II mediator subunit
YIR012W	SQT1______	-1.18	815696	692663	ribosome biogenesis (putative)	unknown
YJR068W	RFC2______	-1.14	560714	490539	DNA replication	replication factor C 41 kD subunit
YKR065C	__________	+1.14	561463	639583	unknown	unknown
YLR222C	__________	-1.52	508916	333829	unknown	unknown
YML092C	PRE8______	+1.04	1181847	1225488	protein degradation	20S proteasome subunit Y7 (alpha2
YNL005C	MRP7______	-1.03	390930	379085	protein synthesis	ribosomal protein, mitochondrial large subunit
YNR044W	AGA1______	-1.82	503533	276481	mating	a-agglutinin anchor subunit
YOR123C	LEO1______	-1.19	430323	360634	unknown	unknown
YPL099C	__________	+1.04	274302	285981	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YPR190C	RPC82_____	-1.39	654771	472239	transcription	RNA polymerase III 82 kD subunit
YAL018C	__________	-1.05	95949	90967	unknown	unknown
YBR182C	SMP1______	-1.01	124128	122324	cell wall organization	MADS box transcription factor
YCRX12W	__________	+1.02	100572	102115
YDR053W	__________	-1.22	126070	103559	unknown	unknown
YDR420W	HKR1______	-1.37	293081	213284	cell wall biogenesis (putative)	unknown; cell surface protein
YER115C	SPR6______	-1.11	324688	293418	sporulation	unknown
YGL113W	__________	-1.08	166839	154059	unknown	unknown
YGR220C	MRPL9_____	+1.06	488404	516800	protein synthesis	ribosomal protein, mitochondrial L9
YIL016W	SNL1______	-1.20	667706	555974	nuclear protein targeting	nuclear pore protein (putative)
YJL114W	__________	-1.22	152956	125362	unknown	unknown
YKL110C	KTI12_____	-1.20	426322	354560	killer toxin resistance	unknown
YLR044C	PDC1______	-1.04	13370049	12837983	glycolysis	pyruvate decarboxylase
YLR416C	__________	-1.18	190637	161800	unknown	unknown
YMR151W	YIM2______	-1.11	153450	137923	unknown	unknown
YNL205C	__________	-1.15	168839	147251	unknown	unknown
YOL109W	ZEO1______	-1.44	8272421	5749829	zeocin resistance	unknown
YOR321W	PMT3______	-1.15	342934	298075	protein glycosylation	dolichyl phosphate-D-mannose:protein O-D-mannosyltransferase
YPR016C	TIF6______	-1.04	142436	136665	ribosome biogenesis (putative)	unknown; similar to human translation initiation factor 6 (eIF6)
YBL109W	__________	-1.37	299662	218341	unknown	unknown
YCL017C	NFS1______	+1.02	337116	342526	tRNA splicing	unknown
YDL113C	__________	+1.16	167110	193025	unknown	unknown
YEL017C	PMP2______	-1.05	1082625	1026276	H+ homeostasis	regulates plasma membrane H+-ATPase
YFR034C	PHO4______	-1.53	187699	122391	phosphate signaling	transcription factor
YHR052W	__________	-1.38	688250	498847	unknown	unknown
YIR022W	SEC11_____	+1.21	514451	622874	secretion	signal peptidase subunit
YJR080C	__________	+1.14	190741	217642	unknown	unknown; similar to Arg8p
YKR077W	__________	+1.16	200950	233513	unknown	unknown
YLR232W	__________	-1.05	100155	95267	unknown	unknown
YNL017C	__________	-1.14	134155	118122	unknown	unknown
YNR056C	BIO5______	-1.09	134717	123264	biotin biosynthesis	transmembrane regulator of KAPA/DAPA transport
YOR135C	__________	-1.02	175639	172294	unknown	unknown
YPL111W	CAR1______	-1.18	350596	297459	arginine metabolism	arginase
YPR202W	__________	-1.18	340979	288264	unknown	unknown; similar to other subtelomerically-encoded proteins
YAL029C	MYO4______	-1.08	104164	96633	cell polarity	myosin; asymmetric HO expression
YBR194W	__________	-1.08	167053	154274	unknown	unknown
YDR065W	__________	-1.07	141406	131544	unknown	unknown
YDR432W	NPL3______	-1.34	388570	289225	mRNA export; protein import	nuclear shuttling protein
YER126C	__________	-1.24	350439	282831	unknown	unknown
YGL125W	MET13_____	-1.03	236413	230160	methionine metabolism	methylenetetrahydrofolate reductase, putative
YGR232W	NAS6______	+1.24	415423	514949	protein degradation (putative)	unknown; interacts with 26S proteasome
YIL028W	__________	-1.15	134114	116548	unknown	unknown
YJL126W	NIT2______	-1.12	185839	166322	unknown	nitrilase
YKL122C	SRP21_____	-1.01	650187	646281	secretion	signal recognition particle subunit
YLR056W	ERG3______	-1.34	2592753	1941843	sterol metabolism	C-5 sterol desaturase
YLR426W	__________	-1.06	303261	286306	unknown	unknown; similar to Fox2p, E. coli 3-oxoacyl-[acyl-carrier
YMR161W	HLJ1______	-1.05	130937	124855	unknown	unknown; similar to E. coli DnaJ
YNL217W	__________	+1.43	677165	971115	unknown	unknown
YOL121C	RPS19A____	-1.08	12278023	11405850	protein synthesis	ribosomal protein S19A
YOR333C	__________	-1.15	206779	179388	unknown	unknown
YPR028W	YIP2______	+1.10	1855209	2033940	unknown	unknown; interacts with Ypt protein(s)
YBR008C	FLR1______	-1.06	158488	149593	fluconazole resistance	transporter, major facilitator superfamily
YCL029C	BIK1______	-1.44	253702	175631	mating; mitosis	microtubule-associated protein
YDL125C	HNT1______	+1.13	1179683	1334027	unknown	unknown; similar to protein kinase C inhibitor-I
YEL028W	__________	-1.16	128064	110301	unknown	unknown
YFR045W	__________	+1.05	184823	193992	unknown	unknown; similar to mitochondrial carrier family protein Ctp1p
YGR046W	__________	+1.23	285934	351158	unknown	unknown; similar to phage 1C ANTP-139 protein PIR:S46430
YHR063C	__________	+1.11	492232	546666	unknown	unknown; similar to Cbs2p
YIR033W	MGA2______	+1.03	617666	638205	transcription	chromatin remodeling (putative)
YJR093C	FIP1______	-1.06	326865	308681	mRNA polyadenylation	interacts with poly(A) polymerase
YKR089C	__________	-1.06	999368	944285	unknown	unknown
YLR244C	MAP1______	-1.06	715084	677578	protein processing	methionine aminopeptidase
YML113W	DAT1______	-1.21	1260314	1044474	transcription (putative)	oligo(dA)/oligo(dT)-binding protein
YNL029C	KTR5______	-1.15	223174	194417	protein glycosylation	putative mannosyltransferase
YNR068C	__________	-1.01	136574	134930	unknown	unknown
YOR145C	__________	-1.32	1343146	1014137	unknown	unknown
YPL123C	RNY1______	+1.41	182377	257081	unknown	ribonuclease, T2 family
YAL039C	CYC3______	+1.04	357751	371007	cytochrome c biosynthesis	cytochrome c heme lyase
YBR206W	__________	-1.26	552254	439628	unknown	unknown
YDR077W	SED1______	+7.59	2300581	17462980	unknown	putative cell surface glycoprotein
YDR444W	__________	+1.08	275539	297222	unknown	unknown
YGL137W	SEC27_____	+1.04	172818	180174	secretion	vesicle coat component
YGR244C	LSC2______	+2.24	626107	1402265	TCA cycle	succinyl-CoA ligase
YIL040W	__________	+1.21	404586	488719	unknown	unknown
YJL138C	TIF2______	-1.15	7609694	6642210	protein synthesis	translation initiation factor eIF4A
YKL134C	OCT1______	-1.10	194106	176969	mitochondrial protein targeting	mitochondrial intermediate peptidase
YLR068W	__________	-1.31	373615	284880	unknown	unknown
YLR438W	CAR2______	+2.21	308325	681455	arginine metabolism	ornithine aminotransferase
YNL229C	URE2______	+1.12	437926	489830	catabolite repression	inhibitor of Gln3p regulator
YOL133W	HRT1______	+1.40	339860	475152	unknown	unknown; similar to C. elegans protein of unknown function
YPR040W	__________	+1.24	378135	468324	unknown	unknown
YBR018C	GAL7______	-1.24	136092	109964	galactose metabolism	gal-1-phosphate uridyl transferase
YCL041C	__________	-1.18	146728	124569	unknown	unknown; similar to human papilloma virus (HPV) E6 protein
YDL135C	RDI1______	-1.09	732721	675310	signaling	rho GDP dissociation inhibitor for Rho1p
YDR260C	SWM1______	-1.30	214598	165033	sporulation	unknown
YEL040W	UTR2______	-1.33	2895293	2172147	unknown	unknown
YFR057W	__________	-1.47	281982	191755	unknown	unknown
YGR058W	__________	+1.01	219310	220527	unknown	unknown
YHR073W	__________	-1.54	480661	312203	unknown	unknown; similar to human oxysterol-binding protein (OSBP)
YJR104C	SOD1______	-1.04	8766346	8462493	oxidative stress response	copper-zinc superoxide dismutase
YKR101W	SIR1______	-1.10	316193	287595	silencing	reulator of silencing at HML and HMR
YLR256W	HAP1______	-2.60	10033094	3859856	transcription	heme-dependent transcription factor
YNL039W	TFC5______	-1.13	390067	345161	transcription	TFIIIB 90 kD subunit
YOR157C	PUP1______	+1.08	1680051	1819450	protein degradation	20S proteasome subunit (beta2)
YPL135W	ISU1______	+1.90	525232	998651	iron homeostasis	unknown; similar to iron-sulfur cluster protein nifU
YAL051W	OAF1______	-1.12	114040	102170	peroxisome proliferation	transcriptional activator of POX1
YBR218C	PYC2______	-1.06	629201	595843	TCA cycle	pyruvate carboxylase 2
YDR089W	__________	-1.33	173519	130152	unknown	unknown
YDR456W	NHX1______	-1.30	390845	301459	transport	Na+/H+ antiporter
YER147C	__________	-1.13	175447	155478	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YGL149W	__________	+1.02	142575	146005	unknown	unknown
YGR256W	GND2______	-1.09	1138264	1043658	pentose phosphate cycle	6-phosphogluconate dehydrogenase
YIL052C	RPL34B____	-1.18	15760239	13407430	protein synthesis	ribosomal protein L34B
YJL150W	__________	-1.15	333158	289683	unknown	unknown
YKL146W	__________	-1.05	290336	275802	unknown	unknown; similar to members of a putative transporter family
YLR080W	__________	+1.04	158405	165367	unknown	unknown
YLR450W	HMG2______	-1.27	445659	351991	sterol metabolism	3-hydroxy-3-methylglutaryl-coenzyme A reductase
YMR183C	SSO2______	-1.00	965369	965258	secretion	post-Golgi t-SNARE
YNL241C	ZWF1______	+1.76	403303	708353	pentose phosphate cycle	glucose-6-phosphate dehydrogenase
YOL145C	CTR9______	-1.09	738428	677600	mitosis, chromosome segregation	unknown
YOR355W	GDS1______	+1.07	611057	655965	respiration (putative)	unknown; suppresses nam9-1
YPR052C	NHP6A_____	+1.19	697957	833460	chromatin structure	non-histone protein
YBR030W	__________	-1.41	243333	172970	unknown	unknown; similar to Sin3p
YCL053C	__________	-1.32	540641	410232
YDL147W	RPN5______	-1.13	1296095	1142843	protein degradation	26S proteasome subunit
YDR268W	MSW1______	-1.04	221173	213408	protein synthesis	tRNA synthetase, mitochondrial, Trp
YEL052W	AFG1______	+1.00	440445	440613	unknown	unknown; similar to members of the AAA family
YGR070W	ROM1______	+1.13	105834	119576	signaling	GDP/GTP exchange protein for Rho1p
YHR084W	STE12_____	-1.31	273858	209114	mating and pseudohyphal growth	transcription factor
YJR116W	__________	-1.18	308940	262067	unknown	unknown
YLR264W	RPS28B____	-1.38	8252396	5971132	protein synthesis	ribosomal protein S28B
YMR003W	__________	-1.07	269380	252719	unknown	unknown
YNL051W	__________	+1.08	141283	152177	unknown	unknown
YOR169C	__________	-1.35	2165163	1602450	unknown	unknown
YPL147W	PXA1______	-1.06	158277	149210	transport	long-chain fatty acid transporter, ABC family
YBR230C	__________	+1.78	244463	436112	unknown	unknown
YDR099W	BMH2______	+1.08	2652634	2852397	unknown	suppresses clathrin deficiency
YDR468C	TLG1______	+1.17	416621	486969	endocytosis	late Golgi t-SNARE
YER158C	__________	+1.41	172452	243670	unknown	unknown; similar to Afr1p
YGL161C	__________	+1.08	446657	480674	unknown	unknown
YGR268C	__________	+1.22	248402	302390	unknown	unknown
YIL064W	__________	-1.61	1022368	633132	unknown	unknown
YJL162C	__________	-1.38	1093139	791207	unknown	unknown; similar to E. coli DnaJ and other DnaJ-like
YKL158W	__________	+1.01	118324	119899
YLR092W	SUL2______	+1.06	134741	142191	transport	sulfate permease
YLR462W	__________	-1.07	232464	217606	unknown	unknown
YNL253W	__________	+1.11	285874	316467	unknown	unknown
YOL157C	__________	+1.05	206969	216382	unknown	putative alpha-glucosidase
YOR367W	SCP1______	+1.30	547979	710928	cytoskeleton (putative)	calponin homolog
YPR064W	__________	-1.09	126518	116081	unknown	unknown
YBR042C	__________	-1.09	324745	298169	unknown	unknown
YCL065W	__________	-1.24	603323	488243	unknown	unknown
YDL159W	STE7______	-1.13	253901	225291	signaling, pheromone and pseudohyphal growth pathways	MAPKK (mitogen-activated protein kinase kinase)
YDR280W	RRP45_____	-1.19	742276	625953	rRNA processing	3'->5' exoribonuclease
YEL063C	CAN1______	+1.01	320822	324834	transport	basic amino acid permease
YGR082W	TOM20_____	-1.21	919059	761974	mitochondrial protein targeting	mito. import receptor
YHR096C	HXT5______	-1.06	953542	895447	transport	hexose permease
YJR128W	__________	-1.05	132349	125773	unknown	unknown
YLR276C	DBP9______	-1.47	812925	554143	unknown	putative RNA helicase
YMR015C	ERG5______	-1.37	1006021	734554	sterol metabolism	C-22 sterol desaturase
YNL061W	NOP2______	-1.52	1083256	711825	nuclear organization	nucleolar protein
YOR181W	LAS17_____	-1.23	339238	276559	cytoskeleton	cortical actin patch component
YPL159C	__________	+1.61	269051	434216	unknown	unknown
YAR010C	__________	-1.09	110823	102044	unknown	unknown
YBR242W	__________	-2.05	642146	313089	unknown	unknown
YDR111C	__________	-1.19	182954	153736	unknown	unknown; similar to alanine aminotransferase (GB:Z48758)
YDR480W	DIG2______	-1.26	203417	162076	invasive growth	negative regulator
YER167W	BCK2______	-1.02	263797	259802	signaling	protein kniase C pathway
YGL173C	KEM1______	+1.11	1079417	1203178	mRNBA decay	DNA and RNA exonuclease
YGR280C	__________	-1.39	1347435	972790	unknown	unknown
YIL073C	SPO22_____	+1.05	257824	271014	sporulation	phospholipase A2, meiosis-specific
YJL174W	KRE9______	+1.31	944549	1237496	cell wall biogenesis	beta-1,6-glucan assembly
YKL170W	MRPL38____	+1.01	425168	429477	protein synthesis	ribosomal protein, mitochondrial L38
YLR104W	__________	+1.36	223989	303963	unknown	unknown
YMR206W	__________	-1.13	138665	122703	unknown	unknown
YNL265C	IST1______	+1.10	335173	369336	salt tolerance (putative)	unknown; similar to Nuf1p
YOR003W	YSP3______	-1.03	235187	228742	protein degradation	subtilisin-like protease III
YOR379C	__________	-1.35	163530	120713	unknown	unknown
YPR076W	__________	-1.05	139603	132953	unknown	unknown
YBR054W	YRO2______	+1.62	708781	1150441	unknown	putative heat shock protein
YCLX04W	__________	+1.28	156725	201366
YDL171C	GLT1______	-1.40	789147	562867	glutamate biosynthesis	glutamate synthase (NAPDPH) (GOGAT)
YDR292C	SRP101____	+1.05	115449	121452	secretion	signal recognition particle receptor subunit
YEL075C	__________	-1.18	170374	144886	unknown	unknown; similar to other subtelomerically-encoded proteins
YGR094W	VAS1______	-1.31	298216	226954	protein synthesis	tRNA synthetase, valyl
YHR108W	GGA2______	-1.24	1147542	926247	secretion (putative)	unknown; binds ARF
YJR140C	HIR3______	-1.25	538557	429910	transcription	regulator of histone transcription
YMR027W	HRT2______	+1.17	406849	475220	transposition, Ty3 (putative)	unknown
YNL073W	MSK1______	-1.01	235559	233960	protein synthesis	tRNA synthetase, mitochondrial, lysyl
YPL171C	OYE3______	+1.03	109776	112967	unknown	NAPDH dehydrogenase (old yellow enzyme)
YAR033W	__________	-1.06	204817	193693	unknown	unknown; similar to subtelomerically-encoded proteins
YBR254C	TRS20_____	-1.10	330828	300369	secretion (putative)	transport protein particle (TRAPP) subunit, 20 kD
YDR123C	INO2______	-1.14	173007	151614	phospholipid biosynthesis	transcription factor
YDR492W	__________	-1.47	500513	339366	unknown	unknown
YER178W	PDA1______	+1.04	2130305	2218520	glycolysis	pyruvate dehydrogenase
YGL185C	__________	+1.05	243967	256559	unknown	unknown; similar to D-2-hydroxyacid dehydrogenase
YGR292W	MAL12_____	+1.03	124618	128191	maltose utilization	alpha-glucosidase
YIL084C	SDS3______	-1.18	151906	128194	silencing	(putative) transcriptional regulator
YJL186W	MNN5______	-1.51	782968	518660	protein glycosylation	alpha-1,2-mannosyltransferase (putative)
YKL182W	FAS1______	+1.01	106590	108043	fatty acid metabolism	fatty-acyl-CoA synthase, beta subunit
YLR116W	MSL5______	-1.04	210663	202507	mRNA splicing	branchpoint bridging protein (commitment complex component)
YMR218C	TRS130____	-1.02	153224	150175	secretion	membrane targeting complex (TRAPP) subunit
YNL277W	MET2______	-1.08	206659	190874	methionine biosynthesis	homoserine O-acetyltransferase
YOR015W	__________	+1.47	540989	794482	unknown	unknown
YOR391C	__________	-1.04	125041	119945	unknown	unknown
YPR088C	SRP54_____	-1.33	1214193	915724	secretion	signal recognition particle subunit
YBR066C	NRG2______	+1.05	122072	127753	unknown	unknown
YCR004C	YCP4______	+1.47	1058669	1558402	unknown	unknown; similar to S. pombe brefeldin A resistance protein
YDL183C	__________	-1.01	166001	163678	unknown	unknown
YDR304C	CYP5______	+1.13	758733	860784	protein folding	peptidyl-prolyl cis-trans isomerase

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YGR106C	__________	-1.10	1979101	1800689	unknown	unknown; similar to Vibrio anguillarum chemotaxis methyl
YHR120W	MSH1______	-1.37	354992	259201	DNA repair	MutS homolog; mitochondrial DNA repair
YJR152W	DAL5______	-1.08	214967	199652	allantoin utilization	allantoate permease
YLR299W	ECM38_____	+1.11	156065	173474	glutathione biosynthesis	gamma-glutamyltransferase
YMR038C	LYS7______	-1.02	617725	604275	oxidative stress response	copper chaperone for superoxide dismutase Sod1p
YNL085W	MKT1______	-1.25	735634	590650	viral propagation	retroviral protease signature protein
YOR203W	__________	-1.30	611129	471629	unknown	unknown
YPL183C	__________	-1.42	775524	547438	unknown	unknown
YBL005W	TY1A______	+1.44	2695370	3885563	unknown	unknown
YBR266C	__________	-1.52	285247	188130	unknown	unknown
YDL005C	MED2______	-1.05	354750	338770	transcription	RNA polymerase II mediator subunit
YDR135C	YCF1______	+1.08	390079	422984	transport	vacuolar glutathione S-conjugate transporter
YDR504C	__________	+1.00	326227	326816	unknown	unknown
YFL003C	MSH4______	-1.09	147054	135503	meiosis, recombination	MutS homolog
YGL197W	MDS3______	-1.02	106445	104504	meiosis	gene expression regulator (putative)
YHL004W	MRP4______	-1.03	375144	362598	protein synthesis	ribosomal protein, mitochondrial small sunubit
YIL096C	__________	-1.58	450522	286021	unknown	unknown
YJL198W	__________	-1.22	206787	170036	unknown	unknown; similar to Pho87p, member of the phosphate
YKL194C	MST1______	+1.00	106703	106781	protein synthesis	tRNA synthetase, mitochondrial, threonyl
YLR128W	__________	+1.04	143946	150156	unknown	unknown
YML005W	__________	+1.02	186450	190013	unknown	unknown
YNL287W	SEC21_____	-1.03	971167	940989	secretion	vesicle coat component
YOR027W	STI1______	+1.43	946269	1354570	protein folding	component of Hsp70-Hsp90 complexes
YPL005W	__________	+1.01	138634	140476	unknown	unknown
YPR100W	__________	-1.05	925072	884615	unknown	unknown
YBR078W	ECM33_____	+1.26	1470078	1850723	cell wall biogenesis	unknown
YCR016W	__________	-1.36	439582	322972	unknown	unknown
YDL195W	SEC31_____	-1.17	210267	178957	secretion	vesicle coat component
YDR316W	__________	-1.30	261256	201580	unknown	unknown
YER018C	SPC25_____	+1.02	202822	206089	cytoskeleton	spindle pole body component
YGL005C	__________	+1.00	245350	246397	unknown	unknown; similar to Xenopus kinesin-related protein Eg5
YGR116W	SPT6______	-1.29	267706	206938	transcription	elongation factor
YJL005W	CYR1______	-1.42	14650564	10284418	cell cycle	adenylate cyclase
YKL005C	__________	-1.12	270732	241423	unknown	unknown; similar to Drosophila transcription factor TFIIS,
YLL005C	__________	-1.08	200400	185330	unknown	unknown
YLR311C	__________	-1.29	145020	112544	unknown	unknown
YMR049C	__________	-1.61	362165	225506	unknown	unknown
YNL097C	PHO23_____	-1.03	285510	277154	phosphate signaling	transcriptional regulator of PHO5
YOL005C	RPB11_____	+1.09	725815	794175	transcription	RNA polymerase II subunit
YOR215C	__________	+1.19	321778	382599	unknown	unknown
YPL194W	DDC1______	-1.05	127287	121322	cell cycle, checkpoint	unknown
YAR061W	__________	-1.11	120302	108649	unknown	unknown; similar to N-terminus of Flo1p
YBL015W	ACH1______	+1.06	143585	152253	acetyl-CoA metabolism	acetyl-CoA hydrolase
YBR278W	DPB3______	+1.14	168441	191795	DNA replication	polymerase epsilon C subunit
YDL017W	CDC7______	+1.10	155353	170870	cell cycle	S phase protein kinase
YDR147W	EKI1______	+1.12	245481	275765	phospholipid metabolism	ethanolamine kinase
YDR516C	__________	+1.69	170047	287251	unknown	unknown; similar to Glk1p
YFL013C	__________	-1.04	212079	203482	unknown	unknown; similar to Ifh1p and Nab3p
YGL209W	MIG2______	-1.03	107115	104249	glucose repression	transcriptional repressor
YHL013C	__________	-1.10	392977	358036	unknown	unknown
YIL107C	PFK26_____	+1.54	156042	240225	fructose and mannose metabolism	6-Phosphofructose-2-kinase
YJL210W	PEX2______	+1.19	264238	314330	peroxisome biogenesis	integral membrane protein
YKL206C	__________	+1.07	310729	334028	unknown	unknown
YLR140W	__________	-1.04	119806	114673	unknown	unknown
YML014W	__________	-1.45	580298	400490	unknown	unknown; similar to Diptheria toxin resistance protein
YMR242C	RPL20A____	-1.46	13346689	9130741	protein synthesis	ribosomal protein L20A
YNL299W	TRF5______	-1.15	201419	175070	mitosis	related to DNA topoisomerase I
YOR039W	CKB2______	-1.08	697349	646923	salt tolerance	casein kinase II regulatory subunit
YPL017C	__________	+1.20	218247	261235	unknown	unknown; similar to Lpd1p
YPR112C	MRD1______	-1.07	140192	130462	unknown	unknown; similar to Pab1p, Pub1p, Nsr1p, Nop4p and other
YBR089W	__________	+1.12	393550	439286	unknown	unknown
YCR026C	__________	-1.11	165343	149324	unknown	unknown; similar to human plasma membrane glycoprotein PCI
YDL207W	GLE1______	-1.21	300398	248723	mRNA export	unknown
YDR326C	__________	-1.08	136189	126446	unknown	unknown
YER029C	SMB1______	-1.10	359591	326692	mRNA splicing	U1 snRNP protein
YGL017W	ATE1______	-1.10	196903	179145	protein synthesis	tRNA transferase, arginyl
YGR128C	__________	-1.45	336199	231884	unknown	unknown; similar to Haemophilus glutamate-ammonia-ligase
YHR142W	CHS7______	+1.33	475680	632410	cell wall biogenesis	ER membrane protein; chitin synthase export
YJL017W	__________	+1.12	151318	168774	unknown	unknown
YKL016C	ATP7______	+1.66	1090028	1810578	ATP synthesis	F1F0-ATPase complex, FO D subunit
YLL017W	__________	-1.03	145869	141894	unknown	unknown
YLR322W	__________	-1.16	121084	104325	unknown	unknown
YMR059W	SEN15_____	-1.23	225650	184190	tRNA splicing	splicing endonuclease subunit
YNL109W	__________	-1.49	445796	299461	unknown	unknown
YOL017W	__________	-1.07	156623	146039	unknown	unknown
YOR227W	__________	+1.25	478472	595864	unknown	unknown
YPL206C	__________	+1.64	466247	764406	unknown	unknown; similar to Mycoplasma genitalium glycerophosphoryl
YBL027W	RPL19B____	+1.15	15760938	18192950	protein synthesis	ribosomal protein L19B
YBR290W	BSD2______	+1.01	312137	316179	transport	Cu(2+) transporter
YDL029W	ARP2______	+1.03	619252	635209	cytoskeleton	actin-related protein
YDR159W	SAC3______	-1.21	393452	325640	leucine transport	nuclear protein
YDR528W	HLR1______	-1.02	314085	306585	trehalose metabolism (putative)	unknown; pKA antagonist
YFL022C	FRS2______	-1.26	1139239	903644	protein synthesis	tRNA synthetase, phenylalanyl
YGL221C	NIF3______	+1.03	612871	633721	unknown	unknown
YHL025W	SNF6______	+1.12	430961	482272	transcription	component of SWI/SNF global activator complex
YIL119C	RPI1______	-1.19	183855	154143	signaling, Ras pathway	negative regulator of ras-cAMP pathway
YJL222W	VTH2______	-1.03	105845	103196	vacuolar protein targeting	unknown; similar to Vps10p
YKL218C	SRY1______	+1.24	169637	210437	serine metabolism	serine racemase
YLR152C	__________	+1.14	122049	139711	unknown	unknown; similar to Ecm3p
YNL311C	__________	+1.20	192565	230558	unknown	unknown
YOR051C	__________	+1.05	1138738	1195479	unknown	unknown
YPL029W	SUV3______	-1.23	229371	187118	RNA processing, mitochondrial	RNA helicase
YPR124W	CTR1______	-1.08	1086282	1001661	transport	copper transporter
YBR100W	__________	-1.03	159101	154728	unknown	unknown
YCR037C	PHO87_____	-1.15	139460	121012	transport	inorganic phosphate permease
YDL219W	__________	-1.16	406324	349991	unknown	unknown
YDR338C	__________	-1.24	134945	109098	unknown	unknown
YER040W	GLN3______	-1.22	237367	195293	nitrogen catabolite repression	transcription factor
YGL029W	CGR1______	-1.55	781006	502922	unknown	unknown; similar to human chromatin assembly factor I p150
YGR140W	CBF2______	+1.01	97885	99164	mitosis	kinetochore protein complex CBF3, 110 KD subunit

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YHR153C	SPO16_____	+1.03	128523	132426	meiosis, spore formation	unknown
YJL029C	VPS53_____	+1.07	238464	254838	vacuolar protein targeting (putative)	unknown
YKL028W	TFA1______	-1.01	407400	402923	transcription	TFIIE 66 kD subunit
YLL029W	__________	+1.20	302125	363984	unknown	unknown
YLR334C	__________	-2.69	2866385	1064672	unknown	unknown
YMR071C	__________	+1.29	689764	890003	unknown	unknown
YNL121C	TOM70_____	-1.12	472070	420937	mitochondrial protein targeting	outer membrane translocase component
YOL029C	__________	-1.06	464847	437893	unknown	unknown
YOR239W	ABP140____	-1.32	436758	329760	cytoskeleton	F-actin binding protein
YPL218W	SAR1______	+1.32	2646231	3497119	secretion	GTP-binding protein of the ARF family
YER189W	__________	+1.04	163905	169715	unknown	unknown; similar to subtelomerically-encoded proteins
YBL039C	URA7______	-1.60	600805	375330	pyrimidine biosynthesis	CTP synthase 1
YBR302C	COS2______	+1.15	613160	707644	unknown	unknown; similar to subtelomerically-encoded proteins
YDL041W	__________	-1.23	113938	92781	unknown	unknown
YDR540C	__________	-1.03	134372	130579	unknown	unknown
YGL232W	__________	-1.15	454445	394050	unknown	unknown; similar to dihydropteroate synthase
YHL036W	MUP3______	+1.06	167998	178725	transport	methionine permease
YIL131C	FKH1______	+1.05	93436	97958	unknown	unknown; similar to Drosophila fork head protein
YJR010W	MET3______	+1.05	240935	253596	methionine biosynthesis	sulfate adenylyltransferase
YKR005C	__________	+1.00	117524	117884	unknown	unknown
YLR162W	__________	+1.01	585574	589381	unknown	unknown
YMR266W	__________	-1.04	118114	113558	unknown	unknown
YNL323W	BRE3______	-1.07	252792	236263	secretion (putative)	unknown; brefeldin A sensitive
YOR063W	RPL3______	-1.02	13420053	13127396	protein synthesis	ribosomal protein L3
YPL041C	__________	-1.26	268294	213351	unknown	unknown
YPR136C	__________	-1.29	207000	160144	unknown	unknown
YBR111C	YSA1______	+1.06	718970	764478	unknown	unknown; similar to Drosophila serendipity protein
YCR049C	__________	-1.17	123169	104888	unknown	unknown
YDL231C	BRE4______	-1.05	188503	180064	secretion (putative)	unknown; major facilitator superfamily; brefeldin A sensitive
YDR350C	TCM10_____	+1.12	200775	223997	unknown	unknown
YER050C	__________	+1.01	362204	364262	unknown	unknown
YGL041C	__________	-1.12	274447	245930	unknown	unknown
YGR152C	RSR1______	+1.00	382739	384081	bud site selection	GTP-binding protein, ras superfamily
YHR165C	PRP8______	+1.02	105445	107180	mRNA splicing	U4/U6, U5 snRNP protein
YJL042W	MHP1______	+1.05	119103	124655	cytoskeleton	microtubule-associated protein
YKL039W	PTM1______	+1.12	536736	600585	unknown	unknown; similar to Yhl017p, member of the major facilitator superfamily
YLL041C	SDH2______	+1.41	303011	425928	TCA cycle, oxidative phosphorylation	succinate dehydrogenase
YLR346C	__________	+1.17	117596	137675	unknown	unknown
YMR082C	__________	-1.01	102010	100945	unknown	unknown
YNL133C	__________	+1.24	172116	213709	unknown	unknown
YOL041C	NOP12_____	+1.09	124833	136672	unknown	unknown; nucleolar protein
YOR251C	__________	+1.10	561461	614950	unknown	unknown; similar to thiosulfate sulfurtransferases
YPL230W	USV1______	-1.63	328211	201137	unknown	unknown; expression increases upon starvation
YBL051C	__________	-1.26	446202	354072	unknown	unknown; similar to RNA-binding proteins, contains 1 RRM domain
YDL053C	__________	-1.09	470699	431930	unknown	unknown
YDR180W	SCC2______	-1.31	278409	213101	mitosis, sister chromatid cohesion	unknown; binds chromosomes
YFL044C	__________	-1.03	137351	132854	unknown	unknown
YGL244W	RTF1______	-1.05	384826	367782	transcription	regulator of Spt15 DNA binding properties
YHL047C	TAF1______	-1.04	184983	177402	transport	triacetylfusarinine C transporter
YIL143C	SSL2______	+1.09	215189	235501	transcription; DNA repair	TFIIH helicase
YJR021C	REC107____	+1.04	197734	206164	meiosis, recombination	ds break formation complex subunit
YKR017C	__________	+1.06	149291	158301	unknown	unknown
YLR174W	IDP2______	+1.36	117464	160263	TCA cycle	isocitrate dehydrogenase
YML046W	PRP39_____	-1.13	161232	142837	mRNA splicing	U1 snRNP protein
YMR278W	__________	+1.05	199378	209725	unknown	unknown; similar to phosphomannomutase
YNL335W	__________	+1.07	127069	136529	unknown	unknown; similar to Myrothecium verrucaria cyanamide hydratase
YOR075W	UFE1______	+1.24	289336	357598	secretion	ER membrane t-SNARE
YPL053C	KTR6______	+1.21	348072	421897	protein glycosylation	mannosylphosphate transferase
YPR146C	__________	+1.15	247310	283878	unknown	unknown
YBR123C	TFC1______	-1.19	282440	236819	transcription	TFIIIC 95 kD subunit
YCR061W	__________	-1.26	185808	147426	unknown	unknown
YDL243C	AAD4______	-1.08	241830	224209	unknown	hypothetical aryl-alcohol dehydrogenase
YDR362C	TFC6______	-1.16	224488	193728	transcription	TFIIIC 91 kD subunit
YGL053W	__________	+1.15	323949	373067	unknown	unknown
YHR177W	__________	-1.05	141957	135295	unknown	unknown
YJL054W	TIM54_____	+1.13	117990	133844	mitochondrial protein targeting	inner membrane translocase component
YKL051W	__________	+1.23	265536	326463	unknown	unknown
YLL053C	__________	-1.36	307828	226095	unknown	unknown; similar to putative aquaporin Ypr192p, member of
YLR358C	__________	+1.04	289188	299342	unknown	unknown
YMR093W	__________	-1.19	649933	544316	unknown	unknown
YNL145W	MFA2______	+1.16	113605	131282	mating	a-factor precursor
YOR263C	__________	+1.03	182106	187366	unknown	unknown; similar to adenosine A1 receptors
YPL242C	IQG1______	+1.04	119159	123741	cytoskeleton	IQGAP homolog
YBL063W	KIP1______	-1.09	109786	100914	mitosis, spindle assembly	kinesin related protein
YDL065C	PEX19_____	+1.11	371847	411620	peroxisome biogenesis	unknown
YDR192C	NUP42_____	-1.12	170722	152715	nuclear protein targeting	nuclear pore protein
YFL056C	AAD6______	-1.17	198656	169646	unknown	hypothetical aryl-alcohol dehydrogenase
YGL256W	ADH4______	-1.19	364000	305328	glycolysis	alcohol dehydrogenase IV
YHR007C	ERG11_____	-1.59	2034021	1276161	sterol metabolism	cytochrome P450 lanosterol 14a-demethylase
YIL155C	GUT2______	+1.04	172545	179377	glycerol metabolism	glycerol-3-phosphate dehydrogenase, mitochondrial
YJR032W	CPR7______	-1.10	443684	404201	protein folding	peptidyl-prolyl cis/trans isomerase
YKR029C	__________	+1.05	197517	207512	unknown	unknown; similar to E(z) Enhancer of zeste in the C-terminal
YLR186W	__________	-1.31	941576	720923	unknown	unknown
YMR290C	HAS1______	-1.59	1269644	800105	unknown	RNA helicase
YNR008W	LRO1______	-1.06	160015	151136	sterol metabolism (putative)	lecithin cholesterol acyl transferase (putative)
YOR087W	__________	-1.33	165098	124499	unknown	unknown
YPL063W	__________	-1.02	1166841	1149109	unknown	phosphatase
YPR158W	__________	+1.23	287542	353465	unknown	unknown
YBR135W	CKS1______	+1.01	1085060	1090901	cell cycle	portein kinase regulator
YCR072C	__________	-1.48	318650	214893	unknown	unknown; similar to nuclear mRNA processing protein Prp4p
YDR007W	TRP1______	+1.18	539056	634927	tryptophan biosynthesis	phosphoribosylanthranilate isomerase
YDR372C	__________	-1.01	421891	419560	unknown	unknown
YER069W	ARG5,6____	+1.36	212406	287956	arginine biosynthesis	acetylglutamate kinase and acetylglutamyl-phosphate reductase
YGL065C	ALG2______	-1.03	290525	281274	protein glycosylation	glycosyltransferase
YGR172C	YIP1______	-1.06	661448	625456	unknown	unknown; interacts with Ypt protein(s)
YHR189W	__________	-1.00	111301	111238	protein synthesis	tRNA hydrolase, peptidyl, putative
YJL066C	__________	+1.36	224983	305006	unknown	unknown
YKL063C	__________	+1.18	456708	538923	unknown	unknown
YLL065W	GIN11_____	-1.11	160810	144826	unknown	growth inhibitor
YLR370C	ARC18_____	+1.33	777217	1037325	cytoskeleton	cortical actin patch integrity; Arp2/3 complex subunit

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YMR105C	PGM2______	+1.47	170569	250372	glycolysis	phosphoglucomutase
YNL157W	__________	+1.71	650411	1112358	unknown	unknown
YOL063C	__________	+1.06	128323	136247	unknown	unknown
YOR275C	__________	+1.02	209208	214387	unknown	unknown
YPL253C	VIK1______	-1.03	200254	194326	nuclear fusion (putative)	Kar3p interactor
YMR320W	__________	+1.03	152076	156219	unknown	unknown
YBL075C	SSA3______	-1.04	263601	252474	ER and mitochondrial translocation	cytosolic HSP70
YDL077C	VAM6______	-1.12	232990	207542	protein degradation	vacuolar carboxypeptidase Y
YDR204W	COQ4______	+1.32	262792	345751	ubiquinone biosynthesis	unknown
YFL068W	__________	+1.05	969244	1018356	unknown	unknown; similar to other subtelomerically-encoded proteins
YGR005C	TFG2______	-1.12	465092	416848	transcription	TFIIF 54 kD subunit
YHR019C	DED81_____	-1.12	4346234	3897706	protein synthesis	tRNA synthetase, arparaginyl
YIL166C	__________	-1.13	228763	202191	unknown	unknown; major facilitator superfamily
YJR044C	__________	+1.72	500693	859319	unknown	unknown; similar to Drosophila yakuba NADH dehydrogenase
YKR041W	__________	-1.09	159651	146638	unknown	unknown
YLR198C	__________	-1.38	3848740	2798141	unknown	unknown
YML068W	__________	-1.02	235575	230421	unknown	unknown
YMR300C	ADE4______	-1.27	964955	762621	purine biosynthesis	amidophosphoribosyltransferase
YNR020C	__________	+1.24	273801	340716	unknown	unknown
YOR099W	KTR1______	+1.27	1149570	1460195	protein glycosylation	mannosyltransferase
YPL075W	GCR1______	-1.15	201930	176300	glycolysis	transcriptional activator
YPR166C	MRP2______	+1.12	348074	390849	protein synthesis	ribosomal protein, mitochondrial S14
YBR147W	__________	-1.04	110522	106600	unknown	unknown
YCR085W	__________	-1.13	123143	109024	unknown	unknown
YDR019C	GCV1______	+1.37	185983	254495	amino acid metabolism	glycine decarboxylase T subunit
YDR384C	__________	-2.03	513735	252622	unknown	unknown; similar to Y. lipolytica Gpr1p
YER081W	SER3______	+1.05	560908	586690	serine biosynthesis	3-phosphoglycerate dehydrogenase
YGL077C	HNM1______	-1.03	616192	596718	transport	choline permease
YGR184C	UBR1______	-1.02	109384	107692	protein degradation, ubiquitin-mediated	ubiquitin-protein ligase
YHR201C	PPX1______	-1.23	1050913	853744	unknown	vacuolar exopolyphosphatase
YJL078C	PRY3______	+1.12	110805	123563	unknown	unknown; similar to plant PR-pathogen related proteins
YKL075C	__________	-1.07	240052	224955	unknown	unknown
YLR010C	__________	+1.05	157464	164650	unknown	unknown
YLR382C	NAM2______	-1.06	173313	163545	protein synthesis	tRNA synthetase, mitochondrial, leucyl
YNL169C	PSD1______	+1.02	251485	256434	phospholipid metabolism	phosphatidylserine decarboxylase
YOL075C	__________	-1.06	246363	232756	unknown	putative ATP-dependent transporter
YOR287C	__________	-1.31	577368	442127	unknown	unknown; similar to PITSLRE protein kinase isoforms
YPL263C	KEL3______	-1.33	308561	231627	unknown	unknown; similar to Kel1p and Kel2p
YBL087C	RPL23A____	-1.24	13024230	10486156	protein synthesis	ribosomal protein L23A
YDL089W	__________	-1.02	205108	200512	unknown	unknown
YDR212W	TCP1______	-1.44	1295573	900468	protein folding	cytoplasmic chaperonin complex
YFR012W	__________	-1.42	226765	159695	unknown	unknown
YGR017W	__________	+1.13	125173	140901	unknown	unknown; similar to Nmd2p
YHR030C	SLT2______	+1.86	1575325	2922306	signaling, PKC1 pathway	MAP kinase (mitogen-activated protein kinase)
YIL177C	__________	+1.14	795764	905062	unknown	unknown; similar to subtelomerically-encoded proteins
YJR056C	__________	-1.18	341186	289453	unknown	unknown
YKR053C	YSR3______	+1.65	281088	464678	sphingolipid metabolism	dihydrosphingosine-1-phosphate phosphatase
YLR210W	CLB4______	-1.14	207922	181740	cell cycle	G2/M cyclin
YML080W	__________	-1.25	514519	411313	unknown	unknown; similar to Azospirillum brasilense nifR3
YMR310C	__________	-1.53	705453	460218	unknown	unknown
YNR032W	PPG1______	+1.08	296063	321188	glycogen metabolism	protein phosphatase
YOR111W	__________	+1.06	236114	250124	unknown	unknown
YPL087W	YDC1______	+1.65	506083	834827	sphingolipid metabolism	dihyroceramidase
YPR178W	PRP4______	-1.09	337524	310370	mRNA splicing	U4/U6 snRNP protein
YBR159W	__________	-1.16	958348	828226	unknown	unknown; similar to human estradiol
YCR096C	HMRA2_____	-1.28	725407	567153	unknown	mating type a specific
YDR031W	__________	+1.09	203761	221996	unknown	unknown
YDR396W	__________	+1.04	646424	672977	unknown	unknown
YER092W	__________	+1.17	403131	471848	unknown	unknown
YGL089C	MF(ALPHA)2	-2.82	4160616	1475740	mating	alpha factor
YGR196C	__________	-1.11	307532	277239	unknown	unknown
YHR213W	__________	-1.15	185235	160555	unknown	unknown; similar to the N-terminus of Flo1p
YJL090C	DPB11_____	-1.11	242183	218297	DNA replication	DNA polymerase II complex
YKL087C	CYT2______	+1.10	335511	370559	cytochrome c1 biosynthesis	cytochrome c1 heme lyase
YLR022C	__________	-1.27	784040	619142	unknown	unknown
YLR394W	CST9______	-1.09	210106	192219	meiosis, synapsis	unknown
YMR128W	ECM16_____	-1.63	732663	448664	cell wall biogenesis	unknown
YNL181W	__________	-1.23	416504	339210	unknown	unknown
YOL087C	__________	+1.19	268033	318978	unknown	unknown
YPL275W	__________	-1.16	129864	111618	unknown	unknown; similar to formate dehydrogenases
YAL007C	ERP2______	+1.36	539803	734530	membrane trafficking; secretion (putative)	unknown
YBR171W	SEC66_____	+1.09	370616	405337	secretion	ER protein translocation subcomplex subunit
YCRX01W	__________	-1.07	98285	91877
YDR042C	__________	-1.10	113594	103398	unknown	unknown
YDR409W	__________	-1.22	893058	731079	unknown	unknown; similar to Nfi1p
YER104W	RTT105____	-1.09	177988	163654	transposition (putative)	unknown
YGL102C	__________	+1.20	15690378	18795333	unknown	unknown
YGR209C	TRX2______	+1.08	2917944	3146312	DNA replication	thioredoxin II
YIL006W	__________	-1.38	273018	197425	unknown	unknown; similar to Flx1p, Yel006p, and other members of
YJL103C	__________	+1.00	174560	174781	unknown	unknown; similar to transcription factors, has Zn[2]-Cys[6]
YKL099C	__________	-1.53	845241	552034	unknown	unknown; similar to human kinesin heavy chain
YLR035C	MLH2______	-1.08	179677	167126	DNA repair	MutL homolog; mismatch repair; non-Mendelian segregation
YLR407W	__________	+1.48	214903	317419	unknown	unknown
YMR140W	__________	-1.05	145151	138503	unknown	unknown
YNL194C	__________	-1.15	129883	113211	unknown	unknown; similar to Sur7p
YOL100W	PKH2______	+1.03	279715	288060	unknown	protein kinase (ser/thr)
YOR310C	NOP58_____	-1.55	3046801	1970320	ribosome biogenesis	nucleolar protein
YPR005C	HAL1______	+1.04	166976	174220	salt tolerance	unknown
YBL100C	__________	-1.40	193088	138138	unknown	unknown
YCL005W	__________	-1.07	305478	285697	unknown	unknown
YDL102W	CDC2______	-1.09	179136	164105	DNA replication	DNA polymerase delta catalytic 125 KD subunit
YDR225W	HTA1______	+1.08	6696164	7221205	chromatin structure	histone H2A
YEL006W	__________	-1.02	276340	271738	unknown	unknown; similar to Aac1p, Pet9p, Aac3p, Yil006p and other
YFR025C	HIS2______	+1.04	197901	204835	histidine biosynthesis	histidinol phosphatase
YGR028W	MSP1______	+1.49	196583	291944	mitochondrial protein targeting	AAA-ATPase
YHR042W	NCP1______	-1.02	203075	199337	microsomal electron transfer	NADP-cytochrome P450 reductase
YIR013C	GAT4______	+1.03	116058	119805	transcription (putative)	DNA binding protein, GATA family
YJR069C	HAM1______	-1.22	661149	543521	6-N-hydroxylaminopurine resistance	unknown
YKR066C	CCP1______	+1.72	675000	1158378	oxidative stress response	cytochrome-c peroxidase
YLR223C	IFH1______	+1.03	467208	483423	rRNA processing	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YML093W	__________	-1.52	377825	248225	unknown	unknown
YNL006W	LST8______	-1.10	363767	332061	secretion	unknown; post-Golgi
YNR045W	PET494____	-1.05	251529	239309	protein synthesis	translation activator of COX3
YOR124C	UBP2______	+1.29	627180	810394	protein degradation, ubiquitin-mediated	ubiquitin-specific protease
YPL100W	__________	-1.02	228359	224123	unknown	unknown; similar to Yfr021p
YPR191W	QCR2______	+1.40	716595	1000034	oxidative phosphorylation	ubiquinol--cytochrome-c reductase 40 kD subunit
YAL019W	FUN30_____	-1.15	235846	205339	unknown	unknown; similar to SNF2 transcriptional regulator
YBR183W	YPC1______	+1.22	183344	224389	sphingolipid metabolism	alkaline ceramidase
YCRX13W	__________	+1.03	302966	311410
YDR054C	CDC34_____	+1.22	298954	363842	protein degradation, ubiquitin-mediated	E2 ub.-conjugating enzyme
YDR421W	__________	+1.06	196781	208255	unknown	unknown
YER116C	__________	-1.08	168605	156803	unknown	unknown
YGL114W	__________	-1.02	239587	235140	unknown	unknown; major facilitator superfamily
YGR221C	__________	+1.03	149016	154224	unknown	unknown
YIL017C	VID28_____	+1.09	140040	151991	vacuolar protein targeting (putative)	unknown
YJL115W	ASF1______	+1.08	465524	503887	transcription	anti-silencing protein
YKL111C	__________	+1.22	278756	338969	unknown	unknown
YLR045C	STU2______	+1.03	155690	160819	cytoskeleton	spindle pole body component
YLR417W	VPS36_____	-1.01	237913	235847	vacuolar protein targeting	unknown?
YMR152W	YIM1______	+1.01	372644	375077	protein processing	mitochondrial inner membrane protease
YNL206C	RTT106____	-1.01	289378	287044	transposition	unknown; similar to SSRP proteins (DNA structure-specific
YOL110W	SHR5______	+1.07	227056	242054	protein processing	localization and palmitoylation of Ras proteins
YOR322C	__________	-1.09	228998	209204	unknown	unknown
YPR017C	DSS4______	-1.03	314240	305014	secretion	GDP/GTP exchange factor for Sec4p
YBL110C	__________	-1.03	187737	181494
YCL018W	LEU2______	-1.23	267093	217198	leucine biosynthesis	beta-isopropyl-malate dehydrogenase
YDL114W	__________	-1.04	105813	102000	unknown	unknown
YEL017W	__________	+1.02	305413	310935	unknown	unknown
YFR035C	__________	-1.30	434744	334320	unknown	unknown
YHR053C	CUP1-1____	-2.23	3562856	1595138	Cu2+ ion homeostasis	metallothionein
YIR023W	DAL81_____	+1.04	118012	122620	transcription	activator of allantoin and urea catabolic genes
YJR082C	__________	+1.09	224590	244614	unknown	unknown
YKR078W	__________	-1.12	169848	151364	unknown	unknown; similar to Uso1p
YLR233C	EST1______	+1.02	114445	116530	telomere length regulation	putative end-binding protein
YML102W	CAC2______	-1.05	331005	315199	chromatin structure	chromatin assembly factor I subunit
YNL018C	__________	-1.35	153787	114055	unknown	unknown; similar to Drosophila melanogaster
YNR057C	BIO4______	-1.14	229966	201418	biotin biosynthesis	dethiobiotin synthetase
YOR136W	IDH2______	+2.42	558936	1354577	TCA cycle	isocitrate dehydrogenase
YPL112C	__________	-1.23	485094	394187	unknown	unknown
YPR203W	__________	+1.03	190636	196297	unknown	unknown; similar to other subtelomerically-encoded proteins
YAL030W	SNC1______	+1.31	356946	465908	secretion	Golgi v-SNARE
YBR195C	MSI1______	-1.22	224681	184687	chromatin structure	chromatin assembly factor I subunit
YDR066C	__________	+1.02	172932	177139	unknown	unknown; similar to Yer139p
YDR433W	__________	-1.08	108399	100811	unknown	unknown
YER127W	LCP5______	-1.40	652081	465315	rRNA processing, putative	unknown
YGL126W	SCS3______	+1.00	97106	97136	phospholipid metabolism	inositol phospholipid biosynthesis
YGR233C	PHO81_____	+1.10	172775	189825	cell cycle	Pho85p kinase inhibitor
YIL029C	__________	+1.31	130633	171312	unknown	unknown
YJL127C	SPT10_____	-1.23	145327	118011	transcription	transcriptional regulator
YKL123W	__________	+1.13	121532	137422	unknown	unknown
YLR057W	__________	+1.06	181073	191828	unknown	unknown
YLR427W	__________	+1.00	200661	201641	unknown	unknown
YMR162C	__________	-1.09	115088	105609	unknown	unknown; similar to members of the Drs2p family of P-type
YNL218W	__________	-1.04	121885	116864	unknown	unknown; similar to E. coli DNA polymerase III gamma and tau
YOL122C	SMF1______	+1.48	284290	420157	transport	high affinity manganese transporter
YOR334W	MRS2______	+1.09	165407	179771	mRNA splicing, mitochondrial	unknown
YPR029C	APL4______	-1.08	923281	851491	secretion	AP complex subunit
YBR009C	HHF1______	+1.02	7594745	7729396	chromatin structure	histone H4
YCL030C	HIS4______	-1.14	847346	745639	histidine biosynthesis	histidinol dehydrogenase
YDL126C	CDC48_____	+1.42	806264	1146994	ubiquitin mediated degredation	microsomal AAA ATPase family
YDR249C	__________	-1.00	139861	139490	unknown	unknown; similar to cytochromes
YEL029C	__________	-1.03	214013	207098	unknown	unknown; similar to putative Salmonella phosphotransferase
YFR046C	__________	-1.02	252736	248980	unknown	unknown
YGR047C	TFC4______	+1.10	144292	158414	transcription	TFIIIC 131 kD subunit
YIR034C	LYS1______	+1.67	297593	497993	lysine biosynthesis	saccharopine dehydrogenase
YJR094C	IME1______	+1.14	159484	182596	meiosis	transcription factor
YKR090W	__________	+1.08	154964	166688	unknown	unknown
YLR245C	CDD1______	+1.08	98712	106635	pyrimidine metabolism	cytidine deaminase
YML114C	TAF65_____	-1.01	351764	349008	transcription	TFIID subunit
YNL030W	HHF2______	+1.01	10119596	10219966	chromatin structure	histone H4
YNR069C	__________	-1.08	218400	201891	unknown	unknown
YOR146W	__________	-1.27	537329	421893	unknown	unknown
YPL124W	NIP29_____	-1.03	235157	229407	nuclear protein targeting	spindle pole body associated protein
YAL040C	CLN3______	+1.03	395403	409236	cell cycle	G1/S cyclin
YBR207W	FTH1______	-1.00	267800	267515	unknown	unknown; similar to Ftr1p
YDR078C	__________	-1.10	174144	158667	unknown	unknown
YDR445C	__________	-1.12	264973	236459	unknown	unknown
YGL138C	__________	+1.12	94307	105381	unknown	unknown
YGR245C	SDA1______	-1.78	889411	500709	cytoskeleton (putative)	unknown
YIL041W	__________	+1.33	1491077	1989650	unknown	unknown
YJL139C	YUR1______	+1.07	149363	159199	protein glycosylation	mannosyltransferase
YKL135C	APL2______	+1.08	137554	148719	secretion	AP-1 complex subunit
YLR069C	MEF1______	+1.05	212909	224069	protein synthesis	translation elongation factor G, mitochondrial
YLR439W	MRPL4_____	-1.02	400089	391670	protein synthesis	ribosomal protein, mitochondrial L4
YMR173W	DDR48_____	+1.89	1328330	2509014	unknown	induced by DNA damage, heat shock, or osmotic stress
YNL230C	ELA1______	+1.16	204286	236428	transcription (putative)	elongin A homolog
YOL134C	__________	+1.22	296807	361535	unknown	unknown
YOR344C	TYE7______	+1.31	549630	719054	glycolysis	basic h-l-h transcription factor
YPR041W	TIF5______	-1.23	1913551	1552950	protein synthesis	translation initiation factor eIF5
YBR019C	GAL10_____	-1.10	123000	112063	galactose metabolism	UDP-glucose 4-epimerase
YCL042W	__________	-1.15	120313	104583	unknown	unknown
YDL136W	RPL35B____	-1.23	3146978	2555628	protein synthesis	ribosomal protein L35B
YDR261C	EXG2______	+1.01	416411	420009	cell wall biogenesis	exo-beta-1,3-glucanase
YEL041W	__________	-1.15	134072	116435	unknown	unknown; similar to Fre2p
YGR059W	SPR3______	+1.14	102590	116620	sporulation	septin
YHR074W	__________	+1.20	459092	550459	unknown	unknown; similar to Rhodobacter protein adgA and Bacillus subtilis NH3-dependent NAD synthetase (spore outgrowth factor)
YJR105W	__________	+1.08	2093415	2257618	unknown	unknown; similar to ribokinase
YKR102W	FLO10_____	-1.04	140355	135325	unknown	unknown; similar to flocculation protein Flo1p
YML125C	__________	-1.15	1284667	1117345	unknown	unknown; similar to NADH-cytochrome b5 reductase
YNL040W	__________	-1.72	324373	188681	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YOR158W	PET123____	+1.10	456123	502230	protein synthesis	ribosomal protein, mitochondrial small subunit
YPL136W	__________	-1.02	131848	128730	unknown	unknown
YAL053W	__________	+2.48	274214	680203	unknown	unknown
YBR219C	__________	-1.09	326985	301286	unknown	unknown
YDR090C	__________	-1.01	222602	220751	unknown	unknown; similar to Yro2p
YDR457W	TOM1______	+1.06	112804	120079	cell cycle, G2/M	unknown
YER148W	SPT15_____	-1.28	1401580	1095182	transcription	TFIID and TFIIIB subunit
YGL150C	INO80_____	+1.32	148955	196532	unknown	unknown; similar to the Snf2p family of DNA-dependent ATPases
YGR257C	__________	+1.07	351750	374621	unknown	unknown; similar to members of the mitochondrial carrier
YIL053W	RHR2______	+1.33	6800112	9059297	glycerol metabolism	DL-glycerol-3-phosphatase
YJL151C	__________	+1.70	868260	1475695	unknown	unknown
YKL147C	__________	+1.19	130164	155174	unknown	unknown
YLR081W	GAL2______	+1.18	121266	143201	transport	glucose and galactose permease
YLR451W	LEU3______	-1.10	172114	156626	leucine biosynthesis	transcription factor
YMR184W	__________	+2.09	260931	546338	unknown	unknown
YNL242W	SPO72_____	+1.07	120008	128048	sporulation	unknown
YOL146W	__________	+1.22	395444	483668	unknown	unknown
YOR356W	__________	-1.03	123834	119982	unknown	unknown; similar to human electron transfer flavoprotein-ubiquinone oxidoreductase
YPR053C	__________	+1.19	941284	1120052	unknown	unknown
YBR031W	RPL4A_____	-1.32	12310330	9324549	protein synthesis	ribosomal protein L4A
YCL054W	SPB1______	-1.38	275134	199738	ribosome biogenesis	rRna methyltransferase (putative)
YDL148C	__________	-1.68	382783	227212	unknown	unknown
YDR269C	__________	-1.18	130637	110980	unknown	unknown
YEL053C	MAK10_____	-1.27	302027	238387	dsRNA virus propagation	unknown
YGR071C	__________	-1.03	144190	140346	unknown	unknown
YHR085W	__________	+1.19	93792	111719	unknown	unknown
YJR117W	STE24_____	+1.14	667725	760354	protein processing	zinc metalloprotease; a-factor precursor processing
YLR265C	__________	+1.50	206299	308502	unknown	unknown
YMR004W	MVP1______	+1.05	291431	307234	vacuolar protein targeting	peripheral Golgi membrane protein
YNL052W	COX5A_____	-1.14	1458578	1282292	oxidative phosphorylation	cytochrome-c oxidase subunit Va
YOR170W	__________	-1.02	369152	363361	unknown	unknown
YPL148C	PPT2______	+1.11	178095	198444	lipid transport	phosphopantetheine
YAL064W	__________	+1.07	91238	97862	unknown	unknown
YBR231C	AOR1______	-1.00	186902	186243	osmotic stress response (putative)	unknown
YDR100W	__________	+1.25	298339	371998	unknown	unknown
YDR469W	__________	+1.07	329181	352514	unknown	unknown; similar to C. elegans dpy-30 gene product,
YER159C	BUR6______	+2.22	624339	1384425	transcription	general pol II repressor
YGL162W	SUT1______	+1.01	143574	145329	transport	hypoxic gene family (sterol uptake)
YGR269W	__________	+1.09	94625	103203	unknown	unknown
YIL065C	MDV2______	+1.51	231223	348784	unknown	unknown
YJL163C	__________	+1.10	133843	147180	unknown	unknown; similar to bovine prefoldin subunit 1
YKL159C	RCN1______	+1.57	182232	285730	signaling	unknown; calcineurin regulator
YLR093C	NYV1______	+1.74	509267	888469	vacuolar protein targeting	vacuolar v-SNARE
YLR463C	__________	+1.04	201195	208953	unknown	unknown; similar to other subtelomerically-coded proteins
YMR195W	ICY1______	+1.49	249810	371859	cytoskeleton (putative)	unknown
YNL254C	__________	-1.07	175626	164800	unknown	unknown
YOL158C	ENB1______	-1.07	317230	296391	transport	enterobactin transporter
YOR368W	RAD17_____	+1.01	298914	301147	cell cycle, checkpoint	3'->5' exonuclease (putative)
YPR065W	ROX1______	-1.01	108618	107163	transcription, oxygen-dependent	transcriptional repressor
YBR043C	__________	+1.04	128640	133473	unknown	major facilitator superfamily
YCL066W	HMLALPHA1_	-1.26	468885	372829	transcription	silenced copy at HML; see YCR040W
YDL160C	DHH1______	-1.15	253292	221026	transcription	RNA helicase
YDR281C	PHM6______	-1.10	136759	124527	phosphate metabolism (putative)	unknown
YEL064C	__________	-1.06	143100	135098	unknown	unknown; similar to members of the major facilitator
YGR083C	GCD2______	-1.30	758986	584250	protein synthesis	translation initiation factor eIF2B subunit
YHR097C	__________	+1.84	286102	525736	unknown	unknown
YJR129C	__________	-1.20	278173	231394	unknown	unknown
YLR277C	YSH1______	-1.01	218630	217050	mRNA 3'-end processing	cleavage/polyadenylation factor CF II component
YMR016C	SOK2______	-1.19	291662	245746	unknown	unknown; similar to several transcription factors
YNL062C	GCD10_____	-1.32	443884	336312	protein synthesis	translation initiation factor eIF3 RNA-binding subunit
YOR182C	RPS30B____	-1.20	5813350	4843591	protein synthesis	ribosomal protein S30B
YPL160W	CDC60_____	-1.02	140798	137425	protein synthesis	tRNA synthetase, leucyl
YAR014C	__________	-1.13	286806	253982	unknown	unknown
YBR243C	ALG7______	-1.02	278798	273329	protein glycosylation	UDP-N-acetyl-glucosamine-1-P transferase (GPT)
YDR112W	__________	-1.07	101719	94914	unknown	unknown
YDR481C	PHO8______	+1.52	218293	332624	phosphate metabolism	vacuolar alkaline phosphatase
YER168C	CCA1______	-1.37	444584	323795	tRNA processing	tRNA nucleotidyltransferase
YGL174W	__________	+1.04	208670	217641	unknown	unknown
YGR281W	YOR1______	+1.32	313333	414852	transport	ATP-binding cassette (ABC) family
YIL074C	SER33_____	+1.23	847553	1038533	serine biosynthesis	3-phosphoglycerate dehydrogenase
YJL175W	__________	-1.35	172321	127956	unknown	unknown
YKL171W	__________	+1.17	126034	147268	unknown	putative protein kinase
YLR105C	SEN2______	+1.14	256702	292432	tRNA splicing	splicing endonuclease subunit
YMR207C	HFA1______	-1.16	316215	272191	unknown	unknown; similar to acetyl-coenzyme A carboxylase
YNL266W	__________	+1.23	272476	334741	unknown	unknown; similar to NADH dehydrogenases
YOR004W	__________	-1.76	1147861	652936	unknown	unknown
YOR380W	__________	+1.08	169091	183315	unknown	unknown; similar to transcription factors, has Zn[2]-Cys[6]
YPR077C	__________	+1.14	129082	147146	unknown	unknown
YBR055C	PRP6______	-1.08	231166	214643	mRNA splicing	U4/U6 snRNP protein
YCLX05C	__________	-1.06	227580	214761
YDL172C	__________	+1.51	460237	695658	unknown	unknown
YDR293C	SSD1______	+1.28	187949	241068	drug resistance	putative protein phosphatase
YGR095C	RRP46_____	-1.34	589943	440949	rRNA processing	3'->5' exoribonuclease
YHR109W	CTM1______	-1.18	213669	181285	proteim modification	cytochrome c trimethylase
YJR141W	__________	+1.01	256664	259114	unknown	unknown
YLR288C	MEC3______	+1.13	164308	186109	DNA repair; DNA damage checkpoint	activates exonuclease
YMR028W	TAP42_____	+1.10	427255	468798	signaling	associated with protein phosphatases
YNL074C	MLF3______	+1.20	370600	444263	unknown	unknown
YPL172C	COX10_____	-1.07	184820	173148	respiration	cytochrome-c oxidase assembly
YAR035W	YAT1______	-1.13	111885	99130	fatty acid transport	carnitine O-acetyltransferase
YBR255W	__________	-1.05	157163	150156	unknown	unknown
YDR124W	__________	-1.03	165060	160812	unknown	unknown
YDR493W	__________	-1.06	179467	169473	unknown	unknown
YER179W	DMC1______	+1.09	144862	157266	meiosis, chromsome pairing	unknown
YGL186C	__________	-1.15	311770	271041	unknown	unknown; similar to Fcy21p, Fcy2p, Fcy22p
YGR293C	__________	-1.06	174062	164649	unknown	unknown
YIL085C	KTR7______	-1.09	581917	535859	protein glycosylation	putative mannosyltransferase
YJL187C	SWE1______	+1.05	225587	235811	cell cycle	negative regulator of Cdc28p
YKL183W	__________	-1.11	161130	144684	unknown	unknown
YLR117C	CLF1______	+1.11	167624	186624	mRNA splicing; cell cycle (putative)	unknown; synthetic lethal with cdc40

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YMR219W	ESC1______	-1.03	444617	431627	silencing	unknown
YNL278W	__________	-1.11	251619	225987	unknown	unknown
YOR016C	ERP4______	-1.01	118420	116873	membrane trafficking; secretion (putative)	unknown
YOR392W	__________	-1.12	117570	104631	unknown	unknown
YPR089W	__________	-1.28	145888	114411	unknown	unknown
YBR067C	TIP1______	-1.27	892051	700957	stress response (putative)	cell wall mannoprotein
YCR005C	CIT2______	+1.17	192354	224324	glyoxylate cycle	peroxisomal citrate synthase
YDL184C	RPL41A____	-1.15	11516947	10018689	protein synthesis	ribosomal protein L41A
YDR305C	HNT2______	-1.05	299505	286331	unknown	histidine triad family
YER008C	SEC3______	-1.33	1215829	914633	secretion	exocyst complex subunit
YGR107W	__________	+1.23	282218	345789	unknown	unknown
YHR121W	__________	-1.09	901695	823618	unknown	unknown
YJR153W	PGU1______	-1.22	204916	168418	unknown	endo-polygalacturonase
YLR300W	EXG1______	+2.20	2378933	5239348	cell wall biogenesis	exo-beta-1,3-glucanase
YMR039C	SUB1______	+1.22	489331	596626	transcription	transcriptional coactivator
YNL086W	__________	-1.08	180630	167268	unknown	unknown
YOR204W	DED1______	-1.25	806803	646585	RNA processing	ATP-dependent RNA helicase
YBL005W	TY1B______	-1.09	97642	89824	unknown	unknown
YBR267W	__________	-1.32	373829	282570	unknown	unknown
YDL006W	PTC1______	+1.05	342492	360293	tRNA splicing	protein phosphatase
YDR136C	__________	-1.08	94863	88077	unknown	unknown
YDR505C	PSP1______	+1.06	108617	115088	unknown	unknown; overexpression suppresses mutation in pol3
YFL004W	PHM1______	+1.30	419126	545018	phosphate metabolism (putative)	polyphosphate synthetase (putative)
YGL198W	__________	+1.16	286123	330869	unknown	unknown; similar to NADH-ubiquinone oxidoreductase chain 2
YHL005C	__________	-1.05	112627	107352	unknown	unknown
YIL097W	__________	+1.07	153400	163844	unknown	unknown
YJL199C	__________	+1.25	122118	152616	unknown	unknown
YKL195W	__________	+1.05	88338	92707	unknown	unknown
YLR129W	DIP2______	-1.42	368916	260550	unknown	interacts with Dom3p
YML006C	GIS4______	-1.10	290701	263597	unknown	unknown
YMR231W	PEP5______	+1.03	218140	224477	vacuole biogenesis	unknown; vacuolar peripheral membrane protein
YNL288W	__________	-1.15	389817	338180	unknown	unknown
YOR028C	CIN5______	-1.40	198518	141388	salt tolerance	basic leu zipper transcription factor
YPL006W	NCR1______	+1.01	110452	111344	sterol metabolism (putative)	unknown
YPR101W	SNT309____	+1.08	390460	422679	mRNA splicing	spliceosome-associated protein
YBR079C	RPG1______	-1.33	1007430	758836	protein synthesis	translation initiation factor eIF3
YCR017C	__________	-1.04	108552	104431	unknown	unknown
YDL196W	__________	-1.25	121990	97458	unknown	unknown
YER019W	__________	+1.11	1234920	1365641	unknown	unknown; similar to mammalian neutral
YGL006W	PMC1______	+1.50	324575	487674	transport	vacuolar Ca(2+)-ATPase
YGR117C	__________	-1.12	292139	261621	unknown	unknown
YHR132C	ECM14_____	-1.16	506296	434832	cell wall biogenesis	unknown
YJL006C	CTK2______	-1.05	200565	191887	transcription	cyclin-like
YKL006C	SFT1______	+1.13	316726	357636	secretion	intra-Golgi v-SNARE
YLL006W	MMM1______	-1.18	190680	161670	mitochondrial biogenesis	(putative) component of actin binding protein complex
YLR312C	__________	-1.00	93687	93373	unknown	unknown
YNL098C	RAS2______	+1.05	715148	752019	signaling, Ras pathway	GTP-binding protein, ras homolog
YOL006C	TOP1______	+1.00	192569	193148	DNA replication	topoisomerase I
YOR216C	RUD3______	-1.23	404038	327923	secretion (putative)	unknown; suppresses uso1-1
YPL195W	APL5______	-1.10	158640	144009	vacuolar protein targeting	AP-3 complex subunit
YAR062W	__________	-1.21	164045	135587	unknown	unknown; similar to the N-terminus of Flo1p, identical to Yhr213p
YBL016W	FUS3______	-1.90	297140	156355	mating (cell cycle arrest)	protein kinase
YBR279W	PAF1______	+1.02	364009	371626	transcription	RNA polymerase II-associated protein
YDL018C	ERP3______	+1.11	227997	253816	membrane trafficking; secretion (putative)	unknown
YDR148C	KGD2______	+1.21	352592	428226	TCA cycle	2-oxoglutarate dehydrogenase
YDR517W	GRH1______	+1.25	323802	405526	unknown	unknown; homolog of mammalian Golgi protein GRASP65
YGL210W	YPT32_____	+1.04	635536	661874	secretion	ras-like GTPase
YHL014C	YLF2______	-1.08	270304	250229	unknown	unknown; similar to B. subtilis GTP-binding protein and human glycogen phosphorylases
YIL108W	__________	+1.61	240555	387819	unknown	unknown
YJL211C	__________	+1.08	131591	142507	unknown	unknown
YKL207W	__________	+1.06	617364	653523	unknown	unknown
YLR141W	RRN5______	-1.04	160808	154199	transcription	component of upstream activation factor complex (UAF)
YML015C	TAF40_____	-1.12	277141	246557	transcription	TFIID 40 kD subunit
YMR243C	ZRC1______	-1.66	1518219	914178	zinc and cadmium ion homeostasis	unknown
YNL300W	__________	+1.11	361053	402096	unknown	unknown; similar to Mid2p
YOR040W	GLO4______	-1.08	223495	207029	methylglyoxal resistance	glyoxalase II
YPL018W	CTF19_____	-1.18	158680	134841	mitosis, chromosome segregation	kinetochore protein
YPR113W	PIS1______	-1.06	1340204	1259242	phospholipid metabolism	phosphatidylinositol synthase
YBR090C	NHP6B_____	+1.58	586649	927472
YCR027C	RSG1______	-1.06	152561	144302	unknown	GTP-binding protein, ras family
YDL208W	NHP2______	-1.41	1950746	1387885	unknown	unknown; similar to high mobility group proteins
YDR327W	__________	+1.25	668811	833475	unknown	unknown
YER030W	__________	+1.14	551727	627459	unknown	unknown
YGL018C	JAC1______	-1.12	223411	198907	protein folding	chaperonin; E. coli Hsc20 homolog
YGR129W	SYF2______	-1.09	201449	184255	cell cycle (putative)	unknown; synthetic lethal with cdc40
YHR143W	RPC10_____	-1.05	684204	652917	transcription	shared subunit of RNA polymerase I,II, and III
YJL018W	__________	-1.01	136800	135466	unknown	unknown
YKL017C	HCS1______	-1.03	174981	170011	DNA replication	DNA helicase A
YLL018C	DPS1______	+1.05	2004550	2103008	protein synthesis	tRNA synthetase, aspartyl
YLR323C	__________	-1.06	154266	145699	unknown	unknown
YNL110C	__________	-1.45	947117	653397	unknown	unknown
YOL018C	TLG2______	+1.06	261584	278380	endocytosis	trans-Golgi network t-SNARE
YOR228C	__________	-1.02	143784	140900	unknown	unknown
YPL207W	__________	-1.44	449896	312390	unknown	unknown
YBL028C	__________	-1.74	662343	381057	unknown	unknown
YBR291C	CTP1______	-1.13	330866	293410	transport	mitochondrial citrate transporter
YDL030W	PRP9______	-1.20	237396	198623	mRNA splicing	U2 snRNP activation
YDR160W	SSY1______	-1.03	156955	153004	transport	regulator of transporters
YDR529C	QCR7______	+1.21	910195	1101022	respiration	cytochrome-c reductase subunit
YFL023W	__________	-1.17	155546	133236	unknown	unknown
YGL222C	EDC1______	+1.07	113439	121412	mRNA processing	unknown; genetic interactiosn with dcp1-2
YHL026C	__________	-1.01	250231	247626	unknown	unknown
YIL120W	QDR1______	+1.07	148304	158705	drug resistance (putative)	unknown; major facilitator superfamily
YJL223C	PAU1______	+1.15	253328	290144	unknown	unknown; similar to members of the Srp1p/Tip1p family
YKL219W	COS9______	+1.06	204547	217140	unknown	unknown; similar to subtelomerically-encoded proteins
YLR153C	ACS2______	-1.27	1024417	804062	acetyl-CoA biosynthesis	acetyl-coenzyme A synthetase
YML027W	YOX1______	+1.22	185721	225989	unknown	binds leu-tRNA gene
YMR255W	GFD1______	-1.06	218405	206147	RNA processing (putative)	unknown; affects DEAD box protein activity
YNL312W	RFA2______	+1.09	458094	500770	DNA replication	replication factor A 36 kD subunit
YOR052C	__________	+1.67	184458	308703	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YPL030W	__________	-1.26	381878	302231	unknown	unknown
YPR125W	__________	-1.19	1034860	872088	unknown	suppresses mrs2-1
YBR101C	__________	-1.34	957265	713229	unknown	unknown; similar to Ypt/Rab interacting protein
YCR038C	BUD5______	-1.12	152517	135681	bud site selection	GDP/GTP exchange factor for Rsr1p/Bud1p
YDL220C	CDC13_____	-1.12	113227	100774	cell cycle, G2/M	telomere binding protein
YDR339C	__________	-1.12	589735	525760	unknown	unknown
YER041W	__________	-1.10	140422	127405	unknown	unknown; similar to DNA repair protein Rad2p
YGL030W	RPL30_____	-1.23	3118889	2540771	protein synthesis	ribosomal protein L30
YGR141W	__________	+1.33	165898	219817	unknown	unknown
YHR154W	ESC4______	-1.01	152284	150367	silencing	unknown
YJL030W	MAD2______	+1.26	228904	287995	mitosis	unknown; spindle-assembly checkpoint
YKL029C	MAE1______	-1.24	255028	205658	pyruvate metabolism	mitochondrial malic enzyme
YLL030C	__________	+1.06	92089	97275	unknown	unknown; similar to Ca++-transporting ATPase
YLR335W	NUP2______	-1.04	440257	423026	nuclear protein targeting	nuclear pore protein
YMR072W	ABF2______	+1.44	742198	1071591	mitochondrial genome maintenance	(putative) HMG transcription factors
YNL122C	__________	+1.01	291337	294924	unknown	unknown
YOL030W	__________	+1.44	983557	1414496	unknown	unknown; similar to Gas1p
YOR240W	__________	-1.13	612382	539563
YPL219W	PCL8______	+1.04	199517	206852	cell cycle	cyclin (Pho85p)
YER190W	YRF1-2____	-1.04	119099	114088	unknown	Y' helicase (subtelomerically-encoded)
YBL040C	ERD2______	+1.35	288692	390750	ER protein retention	HDEL receptor
YDL042C	SIR2______	-1.13	102289	90350	silencing	reulator of silencing at HML, HMR, telomeres
YDR541C	__________	-1.29	173061	134286	unknown	unknown; similar to dihydroflavonol-4-reductases
YGL233W	SEC15_____	+1.15	212461	243545	secretion	exocyst complex subunit
YHL037C	__________	-1.06	111684	105229	unknown	unknown
YIL132C	__________	-1.04	126786	121597	unknown	unknown
YJR010C	SPC1______	+1.10	258974	285624	secretion	signal peptidase subunit
YKR006C	MRPL13____	-1.06	491216	465153	protein synthesis	ribosomal protein, mitochondrial L13
YLR163C	MAS1______	-1.06	319191	300892	protein processing	mitochondrial processing protease subunit
YML037C	__________	+1.02	128572	130981	unknown	unknown
YMR267W	PPA2______	-1.08	153663	142921	oxidative phosphorylation	inorganic pyrophosphatase, mitochondrial
YNL324W	__________	-1.10	114749	104451	unknown	unknown
YOR064C	YNG1______	-1.08	380108	353293	chromatin structure	histone acetyltransferase complex subunit
YPL042C	SSN3______	-1.13	161058	142659	transcription	RNA polymerase II mediator subunit
YPR137W	RRP9______	-1.25	557004	446406	rRNA processing	U3 snRNP protein
YBR112C	CYC8______	-1.18	143229	121394	transcription	general repressor
YCR050C	__________	-1.02	173488	169757	mitochondrial function (putative)	unknown
YDL232W	OST4______	-1.06	140548	132518	protein glycosylation	oligosaccharyltransferase complex assembly
YDR351W	SBE2______	+1.18	229983	270542	bud growth	unknown
YER051W	__________	+1.01	162415	164826	unknown	unknown
YGL042C	__________	-1.22	535228	439382	unknown	unknown; similar to rat Na+/Ca++ exchanger NCX2 PIR:A54139
YGR153W	__________	+1.39	146586	204407	unknown	unknown
YHR166C	CDC23_____	-1.04	218101	210012	mitosis	anaphase promoting complex subunit
YJL043W	__________	-1.16	128360	110412	unknown	unknown
YKL040C	NFU1______	+1.02	525877	535001	iron homeostasis	unknown; similar to Anabaena nitrogen fixing protein nifU
YLL042C	APG10_____	+1.06	130715	138976	autophagy	unknown; protein conjugating enzyme (putative)
YLR347C	KAP95_____	-1.27	237884	187430	nuclear protein targeting	beta-karyopherin
YMR083W	ADH3______	-1.11	5816183	5236052	glycolysis	alcohol dehydrogenase III, mitochondrial
YNL134C	__________	+2.15	609224	1312286	unknown	unknown; similar to C. carbonum toxD gene
YOL042W	__________	+1.09	271486	296108	unknown	unknown; similar to Ccr4p
YOR252W	__________	-1.35	711229	527864	unknown	unknown
YPL231W	FAS2______	-1.13	173279	153846	fatty acid metabolism	fatty-acyl-CoA synthase, alpha subunit
YBL052C	SAS3______	-1.15	180985	156823	silencing	unknown
YDL054C	__________	-1.14	171359	149804	unknown	unknown
YDR181C	SAS4______	-1.14	212705	187274	silencing	unknown
YFL045C	SEC53_____	-1.26	3170987	2507838	protein glycosylation	phosphomannomutase
YGL245W	__________	-1.17	2349721	2014478	protein synthesis	tRNA synthetase, glutamyl
YHL048W	COS8______	+1.15	537607	619154	unknown	unknown; similar to subtelomerically-encoded proteins
YIL144W	TID3______	+1.06	243102	256969	cytoskeleton	spindle pole body component
YJR022W	LSM8______	+1.09	167958	182766	mRNA splicing	snRNP protein (putative)
YKR018C	__________	+1.01	281180	284305	unknown	unknown
YLR175W	CBF5______	-1.40	2903532	2072208	mitosis	centromeric microtubule binding protein
YML047C	__________	-1.08	124158	114463	unknown	unknown
YMR279C	__________	+1.06	176726	187865	unknown	major facilitator superfamily
YNL336W	COS1______	+1.10	123213	135291	unknown	unknown; similar to subtelomerically-encoded proteins
YOR076C	__________	+1.00	273215	273465	unknown	unknown
YPL054W	LEE1______	+1.20	142122	170243	unknown	unknown
YPR147C	__________	-1.03	133408	130085	unknown	unknown
YBR124W	__________	-1.09	96877	89174	unknown	unknown
YCR062W	__________	-1.03	179230	174371	unknown	unknown
YDL244W	THI13_____	+1.10	135103	148908	unknown	unknown; similar to Thi5p, Thi11p, and Thi12p
YDR363W	ESC2______	-1.22	149903	122703	silencing	unknown
YER061C	CEM1______	-1.24	179682	144358	fatty acid metabolism	beta-keto-acyl-ACP synthase, mitochondrial
YGL054C	ERV14_____	+1.05	981805	1034195	polarized growth (putative)	unknown; ER-derived vesicle protein
YHR178W	STB5______	-1.06	139749	132274	transcription	unknown; binds Sin3p
YJL055W	__________	+1.47	626988	922915	unknown	unknown
YKL052C	__________	+1.04	387201	402389	unknown	unknown
YLL054C	__________	+1.22	92695	112737	unknown	unknown; similar to transcription factors, has Zn[2]-Cys[6]
YLR359W	ADE13_____	-1.65	3104167	1886845	purine biosynthesis	adenylosuccinate lyase
YMR094W	CTF13_____	-1.11	154509	139332	mitosis	kinetochore protein complex subunit
YNL146W	__________	+1.06	131377	139807	unknown	unknown
YOL053C	__________	+3.88	126852	491992
YOR264W	__________	+1.16	393562	457240	unknown	unknown
YPL243W	SRP68_____	-1.10	994210	904022	secretion	signal recognition particle subunit
YBL064C	__________	+1.87	240026	449398	unknown	unknown; similar to Tsa1p
YDL066W	IDP1______	+1.30	178184	231412	TCA cycle	isocitrate dehydrogenase (NADP+)
YDR193W	__________	-1.09	106055	97220	unknown	unknown
YFL057C	__________	+1.03	101947	105404	unknown	putative aryl-alcohol reductase
YGL257C	MNT2______	-1.07	286531	266680	protein glycosylation	mannosyltransferase
YHR008C	SOD2______	+1.11	95358	105392	oxidative stress response	Manganese superoxide dismutase
YIL156W	UBP7______	+1.05	201326	211680	protein degradation, ubiquitin-mediated	ubiquitin-specific protease
YJR033C	RAV1______	-1.26	440123	350484	vacuolar acidification (putative)	unknown; regulates V-ATPase
YKR030W	__________	-1.04	480688	461207	unknown	unknown
YLR187W	__________	+1.01	129307	130045	unknown	unknown
YML057W	CMP2______	+1.26	347295	436599	signaling	calcineurin catalytic A subunit
YNR009W	__________	-1.03	299863	291391	unknown	unknown
YOR088W	__________	+1.12	423385	474245	unknown	unknown
YPL064C	__________	+1.02	404384	411172	unknown	unknown
YBR136W	MEC1______	+1.04	90842	94827	DNA repair and recombination	PI kinase homolog
YCR073C	SSK22_____	+1.00	145195	145519	signaling, high osmolarity pathway	MAPKKK (mitogen-activated protein kinase kinase kinase)

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YDR008C	__________	+1.12	416092	467318	unknown	unknown
YDR373W	FRQ1______	+1.11	554932	616399	unknown	unknown; similar to human BDR-1 protein and other calcium
YER070W	RNR1______	+1.18	505254	597045	DNA replication	ribonucleotide reductase
YGL066W	__________	+1.00	110770	110823	unknown	unknown; similar to Dictyostelium discoideum G-box-binding
YGR173W	__________	-1.39	1038113	749011	unknown	unknown; similar to human GTP-binding protein PIR:A55014
YHR190W	ERG9______	-1.14	1430969	1253422	sterol metabloism	squalene synthetase
YJL067W	__________	+1.44	233394	336599	unknown	unknown
YKL064W	MNR2______	+1.16	168737	194983	manganese resistance	unknown
YLL066C	__________	+1.09	102707	111972	unknown	unknown; similar to other subtelomerically-encoded proteins
YLR371W	ROM2______	+1.03	627631	643751	signaling	GDP/GTP exchange factor for Rho1p
YMR106C	YKU80_____	-1.06	150185	141751	DNA repair	DNA binding; Ku80 homolog
YNL158W	__________	-1.01	251299	248146	unknown	unknown
YOL064C	MET22_____	+1.00	502168	504306	methionine biosynthesis	3'(2')5'-bisphosphate nucleotidase
YOR276W	CAF20_____	-1.07	2396504	2229620	protein synthesis	mRNA cap-binding protein (eIF4F) 20K subunit
YPL254W	HFI1______	-1.18	288318	243405	transcription	Ada/Gcn5 protein complex
YMR321C	__________	-1.11	1319875	1190786	unknown	unknown
YBL076C	ILS1______	-1.25	475737	379294	protein synthesis	tRNA synthetase, isoleucyl
YDL078C	MDH3______	+1.16	575632	666466	TCA cycle	malate dehydrogenase
YDR205W	__________	+1.00	180688	181307	unknown	unknown; similar to Cot1p
YFR001W	LOC1______	-1.54	846614	548175	mRNA localization	dsRNA binding protein
YGR006W	PRP18_____	+1.05	182877	191422	mRNA splicing	U5 snRNP protein
YHR020W	__________	-1.39	1638200	1182321	unknown	unknown; similar to prolyl-tRNA synthetases, putative class
YIL167W	__________	-1.22	249860	205012	gluconeogenesis	serine dehydratase
YJR045C	SSC1______	-1.22	2422722	1991284	mitochondrial protein targeting	HSP70 family, chaperonin and import motor
YKR042W	UTH1______	+1.34	5294042	7109154	aging	unknown
YLR199C	__________	+1.13	386757	437423	unknown	unknown
YML069W	POB3______	-1.00	612918	611382	DNA replication (putative)	binds DNA polymerase delta
YMR301C	ATM1______	-1.22	388485	318409	transport	regulator of mit. iron transporter
YNR021W	__________	-1.22	1737234	1420747	unknown	unknown
YOR100C	CRC1______	-1.06	138882	130523	transport	mitochondrial carnitine carrier
YPL076W	GPI2______	-1.15	204598	177745	protein processing	N-acetylglucosaminylphosphatidylinositol synthesis
YPR167C	MET16_____	+1.36	181579	246593	sulfate assimilation	3'-phosphoadenylylsulfate reductase
YBR148W	YSW1______	-1.23	161605	131300	unknown	spore specific
YCR086W	__________	-1.09	243067	222127	unknown	unknown
YDR020C	__________	-1.12	145313	130247	unknown	unknown; similar to uridine kinases and phosphoribulokinases
YDR385W	EFT2______	-1.20	5311326	4411805	protein synthesis	translation elongation factor eEF2
YER082C	__________	-1.38	655629	474650	unknown	unknown
YGL078C	DBP3______	-1.75	1160291	662759	rRNA processing	RNA helicase
YGR185C	TYS1______	-1.29	2308584	1789927	protein synthesis	tRNA synthetase, tyrosyl
YHR202W	__________	-1.16	238554	204893	unknown	unknown
YJL079C	PRY1______	+1.64	851683	1398830	unknown	unknown; similar to plant PR-pathogen related proteins
YKL076C	__________	+1.09	287863	314227	unknown	unknown
YLR011W	__________	+1.13	243662	274481	unknown	unknown; similar to E. coli 20.4 KD protein of unknown function
YLR383W	RHC18_____	+1.03	116350	119373	DNA repair, recombination	unknown
YMR118C	__________	+1.05	175472	184390	unknown	unknown; similar to Sdh3p
YNL170W	__________	+1.17	525937	617296	unknown	unknown
YOL076W	MDM20_____	-1.22	288026	236261	mitochondrial inheritance; actin assembly	transmembrane protein
YOR288C	MPD1______	+1.10	258184	283033	protein folding (putative)	related to protein disulfide isomerases
YPL264C	__________	-1.15	181110	157954	unknown	major facilitator superfamily
YBL088C	TEL1______	-1.05	104182	99486	telomere length regulation	putative phosphatidylinositol kinase
YDL090C	RAM1______	-1.25	232680	186323	protein processing	farnesyltransferase
YDR213W	UPC2______	-1.15	142711	123706	unknown	unknown; similar to transcription factors, has Zn[2]-Cys[6]
YFR013W	IOC3______	-1.26	326503	258107	unknown	unknown
YGR018C	__________	+1.08	423768	458203	unknown	unknown
YHR031C	RRM3______	-1.05	225231	213626	transposition; rDNA replication	DNA helicase
YIR001C	SGN1______	+1.14	351504	402286	unknown; growth on ethanol and glycerol	unknown
YJR057W	CDC8______	+1.03	302876	311603	DNA replication	thymidylate kinase
YKR054C	DYN1______	+1.09	96558	105453	cytoskeleton	dynein heavy chain
YLR211C	__________	+1.21	126356	153428	unknown	unknown
YML081W	__________	+1.15	681778	784560	unknown	unknown
YMR311C	GLC8______	+1.32	641724	846746	mitosis, chromosome segregation	unknown; regulates Glc7p
YNR033W	ABZ1______	-1.21	399630	331052	PABA biosynthesis	para-aminobenzoate synthase
YOR112W	__________	+1.02	223596	228025	unknown	unknown
YPL088W	__________	+3.37	232633	783798	unknown	unknown; similar to Agrobacterium tumefaciens MocA protein
YPR179C	PLO1______	+1.10	168429	185991	unknown; ploidy-related	unknown; similar to C-terminal region of Nip80p
YBR160W	CDC28_____	+1.41	456369	642983	cell cycle	cyclin dependent protein kinase
YCR097W	HMRA1_____	+1.09	134533	146766
YDR032C	PST2______	+2.01	986902	1981887	unknown	unknown; similar to Ycp4p and S. pombe OBR1 brefeldin A; secreted by regenerating protoplasts
YDR397C	NCB2______	+1.11	657589	731700	transcription	negative regulator of RNA polymerase II
YER093C	__________	-1.04	1378372	1329165	unknown	unknown
YGL090W	LIF1______	-1.91	376521	197330	DNA replication (putative)	interacts with DNA ligase
YGR197C	SNG1______	+1.05	213579	225143	nitrosoguanidine resistance	unknown
YHR214W	__________	-1.78	302123	170106	unknown	unknown
YJL091C	__________	+1.05	278406	291246	unknown	unknown; similar to Can1p
YKL088W	__________	-1.11	245547	221792	unknown	unknown; similar to Sis2p
YLR023C	__________	+1.02	213100	217560	unknown	unknown
YLR395C	COX8______	+1.21	621829	751957	oxidative phosphorylation	cytochrome-c oxidase chain VIII
YMR129W	POM152____	-1.03	702949	683043	nuclear protein targeting	nuclear pore protein
YNL182C	__________	-1.53	634983	415180	unknown	unknown
YOL088C	MPD2______	-1.09	710366	651043	unknown	putative protein disulfide isomerase
YOR299W	BUD7______	+1.34	365148	488857	bud site selection, bipolar	unknown
YPL276W	__________	-1.07	147895	138344	unknown	unknown; similar to formate dehydrogenases
YAL008W	FUN14_____	+1.39	169495	235829	unknown	unknown
YBR172C	SMY2______	-1.16	422726	364629	unknown	kinesin related
YCRX02C	__________	+1.02	90114	91849
YDR043C	NRG1______	-1.23	159847	130200	unknown	unknown; suppresses snf mutation(s)
YDR410C	STE14_____	-1.20	284063	236292	mating	a-factor farnesyltransferase
YER105C	NUP157____	-1.02	769881	756934	nuclear protein targeting	nuclear pore protein
YGL103W	RPL28_____	-1.11	14313837	12878291	protein synthesis	ribosomal protein L28
YGR210C	__________	-1.57	880663	559362	unknown	unknown
YIL007C	__________	-1.75	772397	441857	unknown	unknown
YJL104W	__________	-1.37	559461	406959	unknown	unknown
YKL100C	__________	-1.16	272972	235109	unknown	unknown
YLR408C	__________	+1.17	167636	196113	unknown	unknown
YMR141C	__________	+1.39	200333	278750	unknown	unknown
YNL195C	__________	-1.21	148418	122262	unknown	unknown
YOL101C	__________	-1.48	345519	233882	unknown	unknown
YOR311C	__________	-1.18	573320	487014	unknown	unknown
YPR006C	ICL2______	-1.14	190005	166715	unknown	isocitrate lyase, nonfunctional
YBL101C	ECM21_____	-1.01	101981	101357	cell wall biogenesis	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YCL006C	__________	-1.54	216932	140658
YDL103C	QRI1______	-1.06	455738	428276	UDP-N-acetylglucosamine biosynthesis	UDP-N-acetylglucosamine pyrophosphorylase
YDR226W	ADK1______	+1.05	3132113	3304374	metabolism	cytosolic adenylate kinase
YEL007W	__________	+1.02	140290	142445	unknown	unknown; similar to Yhr177p
YFR026C	__________	-1.08	142224	131998	unknown	unknown
YGR029W	ERV1______	-1.13	297899	264564	mitochondrial biogenesis	unknown; similar to human ALR protein
YHR043C	DOG2______	+1.50	378629	568518	2-deoxyglucose resistance	2-deoxyglucose-6-phosphate phosphatase
YIR014W	__________	-1.10	130872	118544	unknown	unknown
YJR070C	__________	-1.74	1863643	1068432	unknown	unknown
YKR067W	__________	-1.08	167939	154804	unknown	unknown; similar to Sct1p
YLR224W	__________	+1.01	316275	319791	unknown	unknown
YNL007C	SIS1______	-1.07	1099273	1028670	translation	heat shock protein, homolog of E. coli DnaJ
YNR046W	__________	-1.69	1430051	845135	unknown	unknown
YOR125C	CAT5______	-1.17	377061	321173	ubiquinone biosynthesis	unknown
YPL101W	__________	-1.25	457948	365959	unknown	unknown
YPR192W	AQY1______	-1.37	226930	165530	transport, water	aquaporin
YAL020C	ATS1______	-1.17	145574	124128	cytoskeleton (putative)	unknown; similar to human RCC1
YBR184W	__________	-1.48	340724	230162	unknown	unknown
YCRX14W	__________	-1.40	243310	174110
YDR055W	PST1______	+5.54	332322	1841849	unknown	unknown; secreted by regenerating protoplasts
YDR422C	SIP1______	-1.54	278509	181254	transcription	negative regulator of GAL genes
YER117W	RPL23B____	-1.31	10428376	7939186	protein synthesis	ribosomal protein L23B
YGL115W	SNF4______	-1.21	722280	598760	glucose derepression	component of Snf1 complex
YGR222W	PET54_____	+1.25	239754	299454	protein synthesis	translation activator of COX3
YIL018W	RPL2B_____	+1.05	15698524	16443269	protein synthesis	ribosomal protein L2B
YJL116C	NCA3______	+1.03	314140	323359	ATP synthesis	regulates expression of F0F1 ATPase subunits
YKL112W	ABF1______	+1.02	285540	290971	transcription	ARS-binding factor
YLR046C	__________	+1.04	279241	289512	unknown	unknown
YLR418C	CDC73_____	-1.10	430707	390848	transcription	RNA polymerase II accessory protein
YMR153W	NUP53_____	-1.08	418102	386878	nuclear protein targeting	nuclear pore protein
YNL207W	__________	-1.11	196905	177687	unknown	unknown
YOL111C	__________	-1.11	825833	744276	unknown	unknown; similar to human ubiquitin-like protein GDX
YOR323C	PRO2______	-1.27	1800455	1422571	proline biosynthesis	gamma-glutamyl phosphate reductase
YPR018W	RLF2______	-1.01	162268	160445	chromatin structure	chromatin assembly factor I subunit
YBL111C	__________	-1.75	339105	193468	unknown	unknown
YCL019W	__________	-3.17	14105985	4448347	unknown	unknown
YDL115C	__________	-1.05	300359	285317	unknown	unknown
YEL018W	__________	-1.14	349090	305202	unknown	unknown
YFR036W	CDC26_____	-1.69	328033	194063	cell cycle	anaphase-promoting complex subunit
YHR054C	__________	-1.20	1006796	836039	unknown	unknown
YJR083C	__________	+1.01	231970	234020	unknown	unknown
YKR079C	__________	-1.31	1111837	848539	unknown	unknown
YLR234W	TOP3______	-1.17	115438	98766	DNA replication	DNA topoisomerase III
YML103C	NUP188____	-1.17	575425	492422	nuclear protein targeting	nuclear pore protein
YNL019C	__________	-1.17	153522	131513	unknown	unknown
YNR058W	BIO3______	+1.11	165031	183769	biotin biosynthesis	DAPA aminotransferase
YOR137C	__________	+1.38	187249	257774	unknown	unknown
YPL113C	__________	-1.18	171277	144938	unknown	unknown; similar to E. coli 2-hydroxyacid dehydrogenase
YPR204W	__________	+1.29	1764909	2275609	unknown	unknown; similar to other subtelomerically-encoded proteins
YAL031C	FUN21_____	-1.13	169010	149479	unknown	unknown
YBR196C	PGI1______	+1.11	2725787	3020510	glycolysis	glucose-6-phosphate isomerase
YDR067C	__________	-1.01	277924	276030	unknown	unknown
YDR434W	__________	+1.12	266225	297114	unknown	unknown
YER128W	__________	-1.04	163294	157669	unknown	unknown
YGL127C	SOH1______	+1.09	306482	333823	unknown	unknown; similar to RNA polymerases
YGR234W	YHB1______	-5.22	9660964	1851944	oxidative stress response (putative)	flavohemoglobin
YIL030C	SSM4______	-1.27	970018	764521	mRNA decay	unknown
YJL128C	PBS2______	-1.21	383639	316350	signaling	two-component pathway
YKL124W	SSH4______	-1.26	402455	320386	unknown	suppresses shr3 mutation
YLR058C	SHM2______	-1.58	946731	598095	one-carbon interconversion	serine hydroxymethyltransferase
YLR428C	__________	-1.11	147426	132796	unknown	unknown
YMR163C	__________	-1.16	174832	150903	unknown	unknown
YNL219C	ALG9______	-1.19	336871	282386	protein glycosylation	mannosyltransferase
YOL123W	HRP1______	-1.39	1017953	730991	mRNA processing	poly(A)+ RNA-binding protein, putative
YOR335C	ALA1______	-1.42	492778	347966	protein synthesis	tRNA synthetase, alanyl
YPR030W	CSR2______	-1.02	133528	131122	unknown	unknown; multicopy suppressor of chs5 spa2 double mutant
YBR010W	HHT1______	+1.09	7566888	8255688	chromatin structure	histone H3
YCL031C	RRP7______	-1.10	1066633	967857	rRNA processing	unknown
YDL127W	PCL2______	+1.11	234514	259988	cell cycle	G1/S cyclin
YDR250C	__________	-1.15	145305	126476	unknown	unknown
YEL030W	ECM10_____	-1.21	205143	170056	cell wall biogenesis	heat shock protein (HSP70)
YFR047C	__________	+1.06	622469	659688	unknown	unknown; similar to Rhodospirillum rubrum and S. typhimurium nicotinate-nucleotide pyrophosphorylase
YGR048W	UFD1______	+1.35	201705	272715	protein degradation, ubiquitin-mediated	unknown; ubiquitin fusion degradation
YHR064C	PDR13_____	-1.11	1584474	1426461	drug resistance	HSP70 homolog
YIR035C	__________	+1.26	351384	443034	unknown	unknown; similar to proteins of the human corticosteroid
YKR091W	SRL3______	+4.20	165153	694320	unknown	unknown; suppressor of Rad53 lethality
YLR246W	ERF2______	+1.09	177801	193947	signaling (putative)	unknown; synthetic lethal with Ras CaaX mutant
YML115C	VAN1______	-1.07	436834	407291	protein glycosylation and vanadate resistance	mannosyltransferase
YNL031C	HHT2______	+1.11	7961497	8820095	chromatin structure	histone H3
YNR070W	__________	-1.04	267526	257017	unknown	unknown; ATP-binding cassette (ABC) family
YOR147W	__________	+1.05	206738	217602	unknown	unknown
YPL125W	KAP120____	-1.01	122362	120838	nuclear protein targeting	karyopherin
YAL041W	CDC24_____	-1.15	444724	385101	cell polarity	GDP/GTP exchange factor for Cdc42p
YBR208C	DUR1,2____	-1.85	417365	225503	nitrogen, amino acid, nucleotide metabolism	urea amidolyase
YDR079W	PET100____	-1.11	409734	367547	respiration	cytochrome-c oxidase assembly
YDR446W	ECM11_____	-2.33	306226	131690	cell wall biogenesis	unknown
YER138C	__________	-1.34	15958128	11928940	unknown	unknown
YGL139W	__________	-3.49	1908616	547621	unknown	unknown
YGR246C	BRF1______	-1.86	691148	371629	transcription	TFIIIB 70 kD subunit
YIL042C	__________	+1.09	207744	227364	unknown	unknown; similar to mitochondrial branched chain
YJL140W	RPB4______	+1.04	899556	933137	transcription	RNA polymerase II 32 kDa subunit
YKL136W	__________	+1.03	139557	143651	unknown	unknown
YLR070C	__________	+1.06	132526	140227	unknown	unknown; similar to sugar dehydrogenases
YLR440C	__________	-1.07	275805	257129	unknown	unknown
YNL231C	PDR16_____	-1.02	1047990	1024842	drug resistance	unknown
YOL135C	MED7______	-1.13	332613	293972	transcription	RNA polymerase II mediator subunit
YOR345C	__________	-1.05	117622	112161	unknown	unknown
YPR042C	PUF2______	-1.08	110349	102424	unknown	mRNA binding protein
YBR020W	GAL1______	-1.34	302649	226008	galactose metabolism	galactokinase
YCL043C	PDI1______	-1.38	1303085	945477	protein folding	protein disulfide isomerase

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YDL137W	ARF2______	+1.02	3449278	3532278	secretion	ADP-ribosylation factor
YEL042W	GDA1______	-1.15	538545	469135	Golgi organization	Golgi membrane guanosine diphosphatase
YGR060W	ERG25_____	-1.91	238199	124982	sterol metabolism	C-4 sterol methyl oxidase
YHR075C	PPE1______	+1.09	257152	279588	protein synthesis	ribosomal protein, mitochondrial small subunit; carboxymethyl esterase
YJR106W	ECM27_____	-1.09	135240	123856	cell wall biogenesis	unknown
YKR103W	__________	+1.02	99819	101372	unknown	ATP-binding cassette (ABC) superfamily
YML126C	ERG13_____	-1.66	2686789	1620268	sterol metabolism	3-hydroxy-3-methylglutaryl coenzyme A synthase
YNL041C	__________	+1.08	177097	192009	unknown	unknown
YOR159C	SME1______	-1.13	426345	376365	mRNA splicing	U1, U2 snRNP protein
YPL137C	__________	+1.08	146658	158212	unknown	unknown; similar to Mhp1p
YAL054C	ACS1______	-1.06	109733	103153	acetyl-CoA biosynthesis	acetyl-CoA synthetase
YBR220C	__________	-1.29	245878	191092	unknown	unknown; similar to E. coli ampG protein
YDR091C	RLI1______	-1.51	622344	412433	unknown	unknown; similar to members of the ATP-binding cassette
YDR458C	__________	-1.16	246754	213327	unknown	unknown
YGL151W	NUT1______	-1.00	105978	105769	mating type switching	negative regulator of HO endonuclease
YGR258C	RAD2______	+1.08	133192	144044	DNA repair, nucleotide excision	single-stranded DNA endonuclease
YIL054W	__________	-1.05	111774	106114	unknown	unknown
YJL152W	__________	+1.54	631820	970252	unknown	unknown
YKL148C	SDH1______	+1.65	231620	383288	TCA cycle, oxidative phosphorylation	succinate dehydrogenase flavoprotein subunit
YLR082C	SRL2______	+1.00	118990	119254	unknown	unknown; suppressor of Rad53 lethality
YLR452C	SST2______	-1.52	783112	514110	mating	negative regulator of Gpa1
YMR185W	__________	-1.01	240673	239200	unknown	unknown
YNL243W	SLA2______	+1.09	849437	924222	cytoskeleton	talin-like protein
YOL147C	PEX11_____	+1.07	464860	497297	peroxisome biogenesis	peripheral membrane protein
YOR357C	GRD19_____	+1.17	460278	537721	secretion	Golgi protein retention
YPR054W	SMK1______	-1.06	146855	138905	sporulation	MAP kinase
YBR032W	__________	-1.12	160480	143518	unknown	unknown
YCL055W	KAR4______	-1.35	234397	173378	karyogamy	transcription factor
YDL149W	APG9______	-1.06	173783	164124	autophagy	unknown; integral membrane protein
YDR270W	CCC2______	-1.19	182093	152809	oxidative phosphorylation	Cu(2+)-transporting ATPase
YEL054C	RPL12A____	-1.40	14308887	10231361	protein synthesis	ribosomal protein L12A
YGR072W	UPF3______	-1.06	321311	304081	mRNA decay, nonsense-mediated	unknown
YHR086W	NAM8______	+1.15	188089	216578	RNA splicing, mitochondrial	RNA binding protein
YJR118C	ILM1______	-1.12	544091	486073	mitochondrial genome maintenance (putative)	unknown
YLR266C	__________	+1.03	165527	170399	unknown	unknown; similar to transcription factors, has Zn[2]-Cys[6]
YMR005W	MPT1______	-1.26	505198	401080	protein synthesis	unknown
YNL053W	MSG5______	+1.35	268489	362006	signaling, pheromone pathway	dual-specificity protein phosphatase
YOR171C	LCB4______	-1.17	377707	324132	sphingolipid metabolism	long chain base kinase
YPL149W	APG5______	+1.45	351926	509255	autophagy	unknown
YAL065C	__________	-1.40	178323	127471	unknown	unknown; similar to Flo1p
YBR232C	__________	-1.24	123689	100055	unknown	unknown
YDR101C	__________	-1.58	1328188	839863	unknown	unknown
YDR470C	__________	-1.01	203339	201953	unknown	unknown; mitochondrial carrier (MCF) family
YGL163C	RAD54_____	-1.01	118616	117723	DNA repair	DNA-dependent ATPase
YGR270W	YTA7______	+1.05	127981	133812	protein degradation	26S proteasome subunit; ATPase
YIL066C	RNR3______	-1.09	210582	192485	DNA repair	repair-induced ribonucleotide reductase
YJL164C	SRA3______	+1.47	193277	283553	signaling	cAMP-dependent protein kinase subunit
YKL160W	__________	-1.00	1152063	1148195	unknown	unknown
YLR094C	GIS3______	-1.00	245822	245305	unknown	unknown
YLR464W	__________	-1.25	309305	248215	unknown	unknown; similar to other subtelomerically-coded proteins
YMR196W	__________	-1.15	809607	703518	unknown	unknown
YNL255C	GIS2______	-1.27	3268592	2581099	unknown	unknown; gig3 suppressor
YOL159C	__________	+1.81	315055	571395	unknown	unknown; similar to Ovis aries melatonin receptor
YOR369C	RPS12_____	+1.31	15958128	20871855	protein synthesis	ribosomal protein S12
YPR066W	UBA3______	-1.19	474747	399057	protein degradation, Rub1p-mediated	Rub1p activating protein
YBR044C	TCM62_____	-1.06	163397	154128	protein folding	chaperone, mitochondrial (putative)
YCL067C	HMLALPHA2_	-1.00	685687	683709	transcription	silenced copy at HML; see YCR039C
YDL161W	ENT1______	-1.09	587636	540647	endocytosis (putative)	unknown; epsin homolog
YDR282C	__________	-1.18	183774	155166	unknown	unknown
YEL065W	SIT1______	-1.14	223361	196457	transport	Ferrioxamine B permease
YGR084C	MRP13_____	-1.01	343621	341812	protein synthesis	ribosomal protein, mitochondrial small subunit
YHR098C	SFB3______	-1.30	559541	429556	unknown	unknown; binds Sed3p and Sec23p
YJR130C	STR2______	+1.05	256912	271005	methionine biosynthesis	O-succinylhomoserine (thiol)-lyase
YLR278C	__________	+1.06	105999	112836	unknown	unknown; similar to transcription factors, has Zn[2]-Cys]
YMR017W	SPO20_____	-1.16	153717	132860	sporulation	SNAP 25 homolog; prospore membrane formation
YNL063W	__________	-1.11	327875	296450	unknown	unknown; similar to Mycoplasma protophorphyrinogen oxidase
YOR183W	__________	-1.10	136687	124338	unknown	unknown
YPL161C	BEM4______	-1.02	115375	113284	bud emergence	interacts with Rho-type GTPases
YAR015W	ADE1______	-2.10	2101024	1002822	purine biosynthesis	phosphoribosylaminoimidazole-succinocarboxamide synthase
YBR244W	GPX2______	-1.30	936326	722839	mitochondrial morphology; glutathione metabolism (putative)	glutathione peroxidase (putative)
YDR113C	PDS1______	-1.09	270485	248138	cell cycle	anaphase inhibitor (putative)
YDR482C	__________	+1.05	414005	436022	unknown	unknown
YER169W	RPH1______	-1.02	183218	180438	DNA repair	transcriptional repressor of PHR1
YGL175C	SAE2______	+1.19	126390	150242	meiosis, recombination	unknown
YGR282C	BGL2______	+2.93	2738055	8031530	cell wall biogenesis	endo-beta-1,3-glucanase
YIL075C	RPN2______	+1.31	717788	939579	tRNA processing	26S proteasome subunit)
YJL176C	SWI3______	+1.04	358029	372862	transcription	component of SWI/SNF global activator complex
YKL172W	EBP2______	-1.63	1566582	960528	unknown	unknown; EBNA1-binding protein homolog
YLR106C	__________	+1.01	115529	117023	unknown	unknown; similar to Rnh70p
YMR208W	ERG12_____	-1.61	572747	355459	sterol metabolism	mevalonate kinase
YNL267W	PIK1______	-1.06	117848	110736	cytokinesis	phosphatidylinositol 4-kinase
YOR005C	DNL4______	-1.29	316183	244637	DNA repair	DNA ligase IV homologue
YOR381W	FRE3______	+1.07	127520	135818	unknown	unknown; similar to Fre2p
YPR078C	__________	+1.68	145721	244105	unknown	unknown
YBR056W	__________	+2.08	305441	635224	unknown	unknown; similar to glucan-1,3-beta-glucosidase
YCLX06C	__________	-1.22	531013	434136
YDL173W	__________	+1.26	456196	573241	unknown	unknown
YDR294C	DPL1______	-1.07	397717	371434	phospholipid metabolism	dihydrosphingosine phosphate lyase
YEL076C	__________	-1.15	190137	165111	unknown	unknown; similar to other subtelomerically-encoded proteins
YGR096W	__________	-1.26	185693	147202	unknown	unknown
YHR110W	ERP5______	+1.24	625476	773431	membrane trafficking; secretion (putative)	unknown
YJR142W	__________	+1.23	342698	420251	unknown	unknown; similar to thiamine pyrophosphokinase
YLR289W	GUF1______	-1.03	129595	125255	unknown	GTPase; similar to E. coli LepA
YMR029C	__________	-1.14	388594	339932	unknown	unknown
YNL075W	IMP4______	-1.36	706462	518119	rRNA processing	U3 snoRNP protein
YOR193W	__________	+1.16	295233	342366	unknown	unknown
YPL173W	MRPL40____	-1.10	393775	357391	protein synthesis	ribosomal protein, mitochondrial L40
YAR037W	__________	-1.52	164038	107846
YBR256C	RIB5______	+1.25	631682	788382	flavin biosynthesis	riboflavin synthase, alpha chain
YDR125C	ECM18_____	-1.21	145906	120453	cell wall biogenesis	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YDR494W	__________	-1.31	324892	247312	unknown	unknown
YER180C	ISC10_____	+1.08	258820	278314	meiosis, spore formation	unknown
YGL187C	COX4______	+1.32	1078607	1421287	oxidative phosphorylation	cytochrome-c oxidase subunit IV
YGR294W	__________	+1.06	525687	559663	unknown	PAU1 unknown; family
YIL086C	__________	-1.36	278423	204264	unknown	unknown
YJL188C	__________	-1.29	14142690	10943899	unknown	unknown
YKL184W	SPE1______	-1.11	925128	836084	polyamine biosynthesis	ornithine decarboxylase
YLR118C	__________	+1.16	380829	443174	unknown	unknown
YMR220W	ERG8______	-1.48	822864	554614	sterol metabolism	phosphomevalonate kinase
YNL279W	PRM1______	-1.11	153300	137671	mating (putative)	unknown; pheromone-regulated membrane protein
YOR017W	PET127____	-1.04	354494	339355	protein synthesis	mitochondrial translation
YOR393W	ERR1______	-1.75	275504	157321	unknown	enolase homolog
YPR090W	__________	-1.04	203683	196462	unknown	unknown
YBR068C	BAP2______	-1.13	114319	101167	transport	branched-chain amino acid permease
YCR006C	__________	-1.19	141296	119144	unknown	unknown
YDL185W	TFP1______	+1.17	999501	1172964	vacuolar acidification	vacuolar H+-ATPase subunit
YDR306C	__________	-1.02	161897	158372	unknown	unknown
YER009W	NTF2______	-1.09	2426013	2234437	nuclear protein targeting	nuclear transport factor
YGR108W	CLB1______	+1.11	597540	664049	cell cycle	G2/M cyclin
YHR122W	__________	-1.35	760769	564588	unknown	unknown
YJR154W	__________	-1.21	164548	135671	unknown	unknown
YLR301W	__________	+1.14	1162617	1320967	unknown	unknown
YMR040W	__________	+1.34	167494	224420	unknown	unknown; similar to Ykl065p
YNL087W	__________	-1.28	960026	750170	unknown	unknown
YOR205C	__________	-1.09	213033	195653	unknown	unknown
YPL184C	__________	-1.03	122512	118836	unknown	unknown
YBL005W	PDR3______	-1.26	165229	131025	transport	transcription factor
YBR268W	MRPL37____	-1.06	440206	414296	protein synthesis	ribosomal protein, mitochondrial L37
YDL007W	RPT2______	+1.47	584285	858497	protein degradation	26S proteasome subunit
YDR137W	RGP1______	-1.26	260749	206668	unknown	unknown
YDR506C	__________	-1.17	137304	117013	unknown	unknown; similar to Fet5p
YFL005W	SEC4______	+1.05	354420	371345	secretion	ras-like GTPase; post-Golgi
YGL199C	__________	-1.08	268493	247526	unknown	unknown
YHL006C	__________	-1.12	159584	142110	unknown	unknown
YIL098C	FMC1______	-1.11	268677	242430	respiration (putative)	production or assembly of mitochondrial cytochromes
YJL200C	__________	-1.46	726802	498148	unknown	unknown; similar to aconitase, has potential mitochondrial
YKL196C	YKT6______	-1.21	897814	743823	secretion	ER-to-Golgi v-SNARE
YLR130C	ZRT2______	-1.41	446548	315965	transport	zinc transporter
YML007W	YAP1______	+1.15	452557	522265	oxidative stress	transcriptional activator
YMR232W	FUS2______	+1.05	233508	244620	mating; cell fusion	fus1 suppressor
YNL289W	PCL1______	+1.11	742299	820568	cell cycle	G1/S cyclin
YOR029W	__________	-1.17	149257	127877	unknown	unknown
YPL007C	TFC8______	+1.07	220862	236019	transcription	TFIIIC subunit
YPR102C	RPL11A____	+1.35	13914930	18754814	protein synthesis	ribosomal protein L11A
YBR080C	SEC18_____	+1.23	294605	361709	secretion	NSF; vesicle fusion
YCR018C	SRD1______	-1.03	89931	87116	rRNA processing	nucleolar protein
YDL197C	ASF2______	-1.25	178261	142663	transcription	anti-silencing protein
YER019C	SBH2______	+1.01	218491	221443	secretion	ER protein translocation complex subunit
YGL007W	__________	-1.16	105479	90842	unknown	unknown
YGR118W	RPS23A____	+1.12	15731037	17635836	protein synthesis	ribosomal protein S23A
YHR133C	__________	-1.12	1075426	957452	unknown	unknown
YJL007C	__________	-1.07	208532	193999	unknown	unknown
YKL006W	RPL14A____	-1.58	12060412	7618043	protein synthesis	ribosomal protein L14A
YLL007C	__________	-1.18	311395	263189	unknown	unknown
YNL099C	__________	-1.29	552883	426998	unknown	unknown
YOL007C	CSI2______	+1.12	297657	334554	cell wall biogenesis	chitin synthase 3 subunit
YOR217W	RFC1______	-1.43	504282	353533	DNA replication	DNA replication factor C 95 KD subunit
YPL196W	__________	+1.11	319401	353451	unknown	unknown
YAR064W	__________	+1.03	120157	123756	unknown	unknown
YBL017C	PEP1______	-1.15	171734	149114	vacuolar protein targeting	CPY sorting receptor
YBR280C	__________	+1.05	125025	131357	unknown	unknown; similar to Srm1p/Prp20p
YDL019C	__________	-1.19	380436	320346	unknown	unknown; similar to Swh1p
YDR149C	__________	-1.11	124806	112340	unknown	unknown
YDR518W	EUG1______	+1.19	249352	295644	protein folding	protein disulfide isomerase
YFL014W	HSP12_____	+4.14	159498	659568	glucose and lipid utilization	heat shock protein
YGL211W	__________	-1.36	230485	169239	unknown	unknown
YHL015W	RPS20_____	-1.14	7810021	6845869	protein synthesis	ribosomal protein S20
YIL109C	SEC24_____	+1.05	619529	652094	secretion	vesicle coat component
YJL212C	OPT1______	-1.54	365105	236366	transport	oligopeptide transporter
YKL208W	CBT1______	-1.10	180480	164174	mRNA processing, COB mRNA	unknown
YLR142W	PUT1______	-1.02	112150	109481	proline utilization	proline oxidase
YML016C	PPZ1______	+1.25	232781	291202	stress response	ser/thr phosphatase
YMR244W	__________	-1.46	245908	168309	unknown	unknown; similar to Nca3p
YNL301C	RPL18B____	-1.25	12585476	10105731	protein synthesis	ribosomal protein L18B
YOR041C	__________	-1.41	301634	214649	unknown	unknown
YPL019C	PHM2______	-1.02	293907	288087	phosphate metabolism (putative)	polyphosphate synthetase (putative)
YPR114W	__________	-1.04	473503	456035	unknown	unknown
YBR090C	__________	+1.33	325117	430979	unknown	unknown
YCR028C	FEN2______	-1.05	110672	105095	unknown	unknown; similar to Dal5p and members of the allantoate
YDL209C	__________	-1.58	248515	157481	unknown	unknown
YDR328C	SKP1______	+1.04	753238	784069	mitosis	kinetochore protein
YER031C	YPT31_____	+1.20	1151684	1386577	secretion	rab GTPase; intra-Golgi
YGL019W	CKB1______	-1.19	546241	460184	salt tolerance	casein kinase II subunit
YGR130C	__________	+1.06	409453	434422	unknown	unknown; similar to Entamoeba histolytica myosin heavy chain
YHR143W	__________	+1.17	421015	493437	unknown	unknown
YJL019W	__________	-1.19	155137	130132	unknown	unknown
YKL018W	__________	-1.20	324840	271321	unknown	unknown
YLL019C	KNS1______	+1.13	166464	188244	unknown	protein kinase
YLR324W	__________	+1.14	187385	213486	unknown	unknown
YMR061W	RNA14_____	-1.12	361417	323554	mRNA 3'-end processing	cleavage/polyadenylation factor CF I component
YNL111C	CYB5______	-2.15	851085	396476	lipid metabolism	cytochrome b5
YOL019W	__________	+1.36	280638	381036	unknown	unknown
YOR229W	WTM2______	-1.14	543566	478479	transcription	shared subunit of RNA polymerases I, II, and III
YPL208W	__________	-1.13	340407	301129	unknown	unknown
YBL029W	__________	-1.03	345623	336774	unknown	unknown
YBR292C	__________	-1.31	146461	111520	unknown	unknown
YDL031W	DBP10_____	-1.41	355299	252305	unknown	unknown; similar to RNA helicases
YDR161W	TCI1______	-1.68	587466	349600	unknown	interacts with PP2C
YDR530C	APA2______	-1.31	203789	155286	purine metabolism	ATP adenylyltransferase II
YFL024C	EPL1______	-1.10	110191	100238	unknown	putative chromatin protein

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YGL223C	__________	-1.01	174536	173245	unknown	unknown
YHL027W	RIM101____	+1.12	303536	340137	meiosis	transcription factor
YIL121W	__________	+1.82	158266	287938	unknown	unknown; major facilitator superfamily
YJL225C	__________	+1.22	795903	970535	unknown	unknown; similar to other subtelomerically-encoded proteins
YKL220C	FRE2______	-1.08	124108	115446	iron homeostasis	ferric (and cupric) reductase
YLR154C	__________	+1.16	239277	277117	unknown	unknown
YML028W	TSA1______	-1.14	12284231	10810996	oxidative stress response	thiol-specific
YNL313C	__________	-1.22	216148	177832	unknown	unknown
YOR053W	__________	-1.01	1648889	1629717	unknown	unknown; similar to protamines
YPL031C	PHO85_____	+1.06	576275	609705	phosphate metabolism; cell cycle; glycogen metabolism	protein kinase
YPR126C	__________	+1.12	326109	364379	unknown	unknown
YBR102C	EXO84_____	-1.40	247039	176289	secretion	exocyst complex subunit
YCR039C	MATALPHA2_	-1.18	467962	396684	transcription	a-specific gene repressor
YDL221W	__________	-1.42	230159	161893	unknown	unknown
YDR340W	__________	-2.66	3345421	1257672	unknown	unknown; similar to Cyc1/Cyp3 transcription activator
YER042W	MXR1______	-1.38	671600	485308	oxidative stress response	peptide-methionine sulfoxide reductase
YGL031C	RPL24A____	-1.01	15674621	15504961	protein synthesis	ribosomal protein L24A
YGR142W	BTN2______	-1.35	449259	332085	unknown	unknown
YHR155W	__________	-1.09	131448	120255	unknown	unknown; similar to Sip3p
YJL031C	BET4______	+1.24	357812	443764	protein processing	geranylgeranyl transferase subunit
YKL030W	__________	-1.22	749983	612629	unknown	unknown
YLL031C	GPI13_____	-1.24	186256	150108	protein processing	phosphoryltransferase (GPI anchor synthesis)
YLR336C	SGD1______	-1.28	212598	166326	signaling (putative)	high osmolarity pathway
YMR073C	__________	-1.06	447172	420488	unknown	unknown; similar to rat cytochrome b5
YNL123W	__________	-1.14	371262	326105	unknown	unknown
YOL031C	__________	+1.08	619847	666446	unknown	unknown; similar to Yarrowia lipolytica Sls1 protein
YOR241W	MET7______	-1.34	749672	559679	methionine biosynthesis	folylpolyglutamate synthase
YPL220W	RPL1A_____	+1.32	15958128	20997096	protein synthesis	ribosomal protein L1A
YBL041W	PRE7______	+1.25	730688	916512	protein degradation	20S proteasome subunit
YDL043C	PRP11_____	-1.23	204206	166107	mRNA splicing	U2, U5, U4/U6 snRNP protein
YDR171W	HSP42_____	+1.16	336152	388757	cytoskeleton assembly	heat shock protein, similar to HSP26
YDR542W	__________	+1.08	274100	295136	unknown	unknown
YFL034W	__________	-1.26	161654	128770	unknown	unknown
YGL234W	ADE5,7____	-1.98	1690775	855033	purine biosynthesis	phosphoribosylamine-glycine ligase and phosphoribosylformylglycinamidine cyclo-ligase
YHL038C	CBP2______	-1.13	252364	222825	mRNA splicing, COB mRNA	pre-mRNA binding protein
YIL133C	RPL16A____	-1.25	11310870	9084597	protein synthesis	ribosomal protein L16A
YJR011C	__________	-1.18	281250	238647	unknown	unknown
YKR007W	__________	-1.07	514147	478911	unknown	unknown
YLR164W	__________	-1.15	171943	149336	unknown	unknown; similar to Sdh4p
YML038C	YMD8______	+1.06	468565	495060	unknown	unknown; similar to vanadate resistance protein Gog5p
YMR268C	PRP24_____	-1.23	327358	266917	mRNA splicing	U4/U6 snRNP protein
YNL325C	FIG4______	-1.03	234491	227134	mating (putative)	unknown; induced by mating factor
YOR065W	CYT1______	+1.18	1085475	1285957	oxidative phosphorylation	cytochrome c1
YPL043W	NOP4______	-1.45	569923	394319	rRNA processing	RNA binding protein
YBR113W	__________	-1.34	963369	720916	unknown	unknown
YCR051W	__________	-1.72	850344	494407	unknown	unknown; similar to ankyrin and coiled-coil protein
YDL233W	__________	-1.07	209961	195316	unknown	unknown
YDR352W	__________	-1.26	328381	260429	unknown	unknown
YER052C	HOM3______	+1.02	514715	523750	Met. and Thr. biosynthesis	aspartate kinase
YGL043W	DST1______	-1.12	109999	97802	transcription	elongation factor TFIIS
YGR154C	__________	+1.02	151495	154547	unknown	unknown
YHR167W	__________	-1.16	221284	190059	unknown	unknown
YJL044C	GYP6______	+1.14	507504	577219	secretion	GTPase-activating protein for Ypt6
YKL041W	VPS24_____	+1.08	409739	444354	vacuolar protein targeting	component of class E protein complex
YLL043W	FPS1______	-1.22	470469	386735	transport	glycerol channel protein
YLR348C	DIC1______	+1.01	205252	206970	transport	mitochondrial dicarboxylate carrier
YNL135C	FPR1______	+1.50	1157305	1741232	protein folding	peptidyl-prolyl cis-trans isomerase
YOL043C	NTG2______	+1.04	274384	286055	DNA repair	endonuclease III-like glycosylase
YOR253W	__________	+1.25	1078746	1351472	unknown	unknown
YPL232W	SSO1______	+1.43	1316424	1880987	secretion	post-Golgi t-SNARE
YBL053W	__________	-1.25	322699	258055	unknown	unknown
YDL055C	PSA1______	-1.12	3285800	2930595	mannose metabolism	mannose-1-phosphate guanyltransferase
YDR182W	CDC1______	-1.12	413051	367240	Mn2+ ion homeostasis	unknown
YFL046W	__________	+1.01	339413	341542	unknown	unknown; similar to myosin heavy chain A
YGL246C	RAI1______	-1.19	524775	439915	unknown	unknown; similar to C. elegans DOM-3 (GB:1004375)
YHL049C	__________	-1.16	258751	222131	unknown	unknown; similar to other subtelomerically-encoded proteins
YIL145C	__________	-1.01	596565	592406	unknown	unknown; similar to E. coli pantoate beta-alanine ligase
YJR023C	__________	-1.01	185706	183080	unknown	unknown; similar to sodium channel proteins
YKR019C	IRS4______	-1.10	160465	146344	silencing (rDNA)	unknown
YLR176C	RFX1______	-1.08	158384	146721	unknown	unknown; DNA binding protein
YMR280C	CAT8______	-1.05	390049	371900	gluconeogenesis	transcription factor
YNL337W	__________	+1.15	136820	157934	unknown	unknown
YOR077W	RTS2______	-1.25	171587	136810	unknown	unknown; similar to mouse KIN7 protein
YPL055C	__________	-1.10	354947	322049	unknown	unknown
YPR148C	__________	+1.70	644697	1093006	unknown	unknown
YBR125C	PTC4______	-1.21	310435	257180	unknown	protein phosphatase type 2C
YCR063W	__________	-1.24	131078	105475	unknown	unknown; similar to Xenopus G10, a developmentally-regulated
YDL245C	HXT15_____	-1.14	146320	128234	transport	hexose permease
YDR364C	CDC40_____	-1.28	245830	192215	cell cycle and mRNA splicing	unknown
YER062C	HOR2______	+1.67	2190572	3649972	glycerol metabolism	DL-glycerol-3-phosphatase
YGL055W	OLE1______	-2.00	2152951	1074863	fatty acid metabolism	delta-9-fatty acid desaturase
YGR162W	TIF4631___	-1.44	526963	367022	protein synthesis	mRNA cap-binding protein (eIF4F) 150K subunit
YHR179W	OYE2______	+1.57	3267831	5142117	unknown	NAPDH dehydrogenase (old yellow enzyme)
YJL056C	ZAP1______	-1.06	157296	148306	transport (Zn)	transcription factor
YKL053W	__________	+1.06	407603	433156	unknown	unknown
YLL055W	__________	+1.01	113972	115320	unknown	unknown; similar to Dal5p and members of the allantoate
YLR360W	VPS38_____	+1.03	369459	379011	vacuolar protein targeting	unknown
YMR095C	SNO1______	-1.07	141020	131460	unknown	unknown; induced in stationary phase
YNL147W	LSM7______	+1.18	666895	788625	mRNA splicing (putative)	similar to snRNA-associated protein
YOL053W	__________	+1.14	232197	264001	unknown	unknown
YOR265W	RBL2______	+1.14	566660	643202	cytoskeleton	beta-tubulin binding protein
YPL244C	HUT1______	-1.01	300454	297398	unknown	unknown
YBL065W	__________	-1.01	90774	89719	unknown	unknown
YDL067C	COX9______	+1.41	636365	898048	oxidative phosphorylation	cytochrome c oxidase assembly
YDR194C	MSS116____	-1.37	418766	305929	mRNA splicing, mitochondrial	RNA helicase
YFL058W	THI5______	+1.20	141541	169878	pyrimidine biosynthesis	unknown
YGL258W	__________	-1.11	150068	134734	unknown	unknown
YHR009C	__________	+1.15	327326	375877	unknown	unknown
YJR034W	PET191____	+1.05	268088	281834	respiration	cytochrome c oxidase assembly
YKR031C	SPO14_____	+1.04	113083	117387	meiosis	phospholipase D

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YLR188W	MDL1______	-1.07	199171	185339	transport	ATP-binding cassette (ABC) family
YML058W	SML1______	+1.51	1439577	2173189	DNA replication (putative)	regulator of ribonucleotide reductase (putative)
YMR291W	__________	+1.39	203269	283044	unknown	unknown
YNR010W	CSE2______	+1.25	202426	252182	mitosis, chromosome segregation	kinetochore protein (putative)
YOR089C	VPS21_____	+1.08	846399	911331	endocytosis	rab5-like GTPase
YPL065W	VPS28_____	+1.23	277677	341705	vacuolar protein targeting	cytoplasmic protein
YBR137W	__________	+1.05	97990	103238	unknown	unknown
YCR073W	SOL2______	-1.06	90004	84536	tRNA splicing, putative	unknown
YDR009W	GAL3______	-1.03	109996	106297	galactose metabolism	galactokinase
YDR374C	__________	-1.09	102416	94312	unknown	unknown
YER071C	__________	+1.04	181895	188444	unknown	unknown
YGL067W	NPY1______	+1.03	97087	100158	NAD metabolism	NAD+ pyrophosphatase
YGR174C	CBP4______	+1.09	418990	455036	respiration	ubiquinol--cytochrome-c reductase assembly factor
YHR191C	CTF8______	-1.21	502737	416034	mitosis (putative)	kinetochore protein (putative)
YJL068C	__________	+1.49	329481	490329	unknown	unknown; similar to human esterase D
YKL065C	YET1______	+2.87	758128	2179520	unknown	ER 25 kDa transmembrane protein
YLL067C	__________	+1.02	119288	122074	unknown	unknown; similar to other subtelomerically-encoded proteins
YLR372W	SUR4______	-1.12	1228994	1100487	fatty acid metabolism	conversion of 24-carbon to 26-carbon fatty acids
YMR107W	__________	-1.05	132117	126096	unknown	unknown
YNL159C	__________	+1.22	281021	342730	unknown	unknown
YOL065C	INP54_____	-1.02	287570	282628	unknown	putative inositol polyphosphate 5-phosphatase
YOR277C	__________	-1.18	2258923	1921167	unknown	unknown
YPL255W	BBP1______	-1.16	297642	257497	cell cycle and meiosis	unknown
YMR322C	__________	-1.09	130731	119409	unknown	unknown
YBL077W	__________	-1.28	2253815	1760863	unknown	unknown
YDL079C	MRK1______	-1.17	213687	183027	unknown	protein kinase
YDR206W	EBS1______	-1.16	185593	160621	unknown	unknown; similar to Est1p; bcy1 suppressor
YFR002W	NIC96_____	-1.12	306481	274182	nuclear protein targeting	nuclear pore protein
YGR007W	MUQ1______	-1.22	453500	371289	phospholipid metabolism	choline phosphate cytidylyltransferase
YHR021C	RPS27B____	-1.29	6484790	5030622	protein synthesis	ribosomal protein S27B
YIL168W	SDL1______	-1.54	242074	157056	gluconeogenesis	serine dehydratase
YJR046W	TAH11_____	-1.21	408004	337810	unknown	unknown
YKR043C	__________	-1.29	786212	611026	unknown	unknown
YLR200W	YKE2______	-1.08	590290	547389	cytoskeleton	microtubule nucleation
YML070W	DAK1______	+1.27	464555	588285	carbohydrate metabolism; stress response	dihydroxyacetone kinase
YMR302C	PRP12_____	+1.05	244728	257657	rRNA processing	mitochondrial inner membrane protein
YNR022C	__________	-1.11	489141	440753	unknown	unknown
YOR101W	RAS1______	-1.66	718587	432609	signaling, Ras pathway	GTP-binding protein, ras homolog
YPL077C	__________	-1.04	194613	186981	unknown	unknown; similar to Ybr197p
YPR168W	NUT2______	-1.08	117569	108853	mating type switching	negative regulator of HO expression
YBR149W	ARA1______	+1.70	616000	1049341	arabinose metabolism	arabinose dehydrogenase
YCR087W	__________	-1.67	2890502	1728809	unknown	unknown
YDR021W	FAL1______	-1.76	460595	261715	rRNA processing	RNA helicase
YDR386W	MUS81_____	-1.20	165364	137639	DNA repair (putative)	unknown
YER083C	__________	-1.40	731763	522143	unknown	unknown
YGL079W	__________	-1.22	306209	250028	unknown	unknown
YGR186W	TFG1______	-1.26	774185	612441	transcription	TFIIF 105 kD subunit
YHR203C	RPS4B_____	+1.23	15826584	19468884	protein synthesis	ribosomal protein S4B
YJL080C	SCP160____	-1.32	1218193	921564	mitosis, chromosome transmission	unknown
YKL077W	__________	-1.13	712088	630767	unknown	unknown
YLR012C	__________	-1.24	268596	217037	unknown	unknown
YLR384C	IKI3______	-1.56	1314668	842105	killer toxin sensitivity	unknown
YMR119W	__________	-1.14	228114	200568	unknown	unknown
YNL171C	__________	+1.18	177171	209310	unknown	unknown
YOL077C	__________	-1.64	2155469	1317493	unknown	unknown; similar to C. elegans Kq2H4.3 protein
YOR289W	__________	+1.66	198792	330572	unknown	unknown
YPL265W	DIP5______	-1.08	428641	396031	transport	dicarboxylic amino acid permease
YBL089W	__________	-1.17	103919	88734	unknown	major facilitator superfamily
YDL091C	__________	+1.03	201649	206821	unknown	unknown
YDR214W	__________	+1.17	652824	762707	unknown	unknown
YFR014C	CMK1______	-1.02	229687	225020	signaling	calmodulin-dependent protein kinase
YGR019W	UGA1______	+1.82	228415	415574	GABA metabolism	4-aminobutyrate aminotransferase (GABA transaminase)
YHR032W	__________	-1.55	290579	187788	unknown	major facilitator superfamily
YIR002C	MPH1______	-1.10	270519	245291	unknown; mutator null phenotype	unknown; similar to ATP-dependent RNA helicases
YJR058C	APS2______	+1.02	486740	495366	secretion	AP-1 complex subunit
YKR055W	RHO4______	-1.25	222246	178401	signaling	GTP-binding protein, rho family
YLR212C	TUB4______	-1.02	335268	328704	cytoskeleton	gamma-tubulin
YML082W	__________	-1.35	263585	195189	unknown	unknown; similar to O-succinylhomoserine (thiol)-lyase
YMR312W	__________	-1.47	370614	252281	unknown	unknown
YNR034W	SOL1______	-1.15	289871	252578	tRNA splicing, putative	unknown
YOR113W	AZF1______	+1.12	144493	162334	transcription (putative)	similar to Zn-finger transcription factors
YPL089C	RLM1______	+1.23	972294	1192302	cell wall organization	MADS box transcription factor
YPR180W	AOS1______	-1.06	394046	372551	protein degradation, Smt3p-mediated	Smt3p activating protein
YBR161W	__________	+1.00	226681	227796	unknown	unknown; similar to Sur1p, Hoc1p, and Och1p
YCR097W	HMRA1_____	-1.08	121334	111999
YDR033W	MRH1______	+1.35	2236757	3020804	unknown	similar to Yro2p and Hsp30p
YDR398W	__________	-1.28	235346	183535	unknown	unknown
YGL091C	NBP35_____	-1.11	369248	331923	unknown	unknown; essential; similar to bacterial partitioning ATPases
YGR198W	__________	-1.09	706431	648117	unknown	unknown
YJL092W	HPR5______	-1.06	195414	184675	meiosis	DNA helicase
YKL089W	MIF2______	-1.06	220720	207358	mitosis	centromere protein
YLR024C	UBR2______	-1.21	535614	442331	protein degradation, ubiquitin-mediated	ubiquitin-protein ligase
YLR396C	VPS33_____	-1.21	659356	546169	vacuolar protein targeting	Sec1 protein family
YMR130W	__________	+1.09	525591	571099	unknown	unknown
YNL183C	NPR1______	-1.04	190249	182851	transport	protein kinase; regulates activity of nitrogen source transporters
YOL089C	HAL9______	-1.04	228719	220857	salt tolerance	transcription factor (putative)
YOR300W	__________	+1.40	235280	329629	unknown	unknown
YPL277C	__________	-1.07	198177	186025	unknown	unknown
YAL009W	SPO7______	-1.10	87987	79861	meiosis	unknown
YBR173C	UMP1______	+1.41	343402	485136	protein degradation, ubiquitin-mediated	20S proteasome maturation factor
YCRX03C	__________	-1.11	94886	85392
YDR044W	HEM13_____	+1.04	270732	280765	heme biosynthesis	coproporphyrinogen III oxidase
YDR411C	__________	+1.14	317735	363078	unknown	unknown
YER106W	__________	-1.11	104709	94071	unknown	unknown
YGL104C	__________	-1.09	139269	127932	unknown	unknown; similar to glucose transport proteins
YGR211W	ZPR1______	-1.77	604777	342035	unknown	unknown; zinc finger protein
YIL008W	URM1______	-1.38	505119	364925	protein modification	ubiquitin-like protein
YJL105W	__________	-1.19	150033	126552	unknown	unknown; similar to Ykr029p
YKL101W	HSL1______	+1.12	370499	415305	cell cycle	negative regulator of swe1 kinase
YLR409C	__________	-1.45	179659	124295	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YNL196C	SLZ1______	-1.57	233963	149318	meiosis	unknown
YOL102C	TPT1______	-1.16	387580	333697	tRNA splicing	2'-phosphotransferase
YOR312C	RPL20B____	-1.23	14784365	12003457	protein synthesis	ribosomal protein L20B
YPR007C	SPO69_____	-1.16	193799	167381	sporulation	unknown
YBL101W	TY2A______	+1.21	1222267	1478691	unknown	unknown
YCL007C	CWH36_____	-1.19	665469	558574	cell wall biogenesis	unknown
YDL104C	QRI7______	+1.06	146099	154274	unknown	unknown; similar to E. coli orfx gene
YDR227W	SIR4______	-1.11	114710	103765	silencing	nuclear coiled-coil protein, regulator of silencing
YEL008W	__________	-1.26	121628	96692	unknown	unknown
YFR027W	ECO1______	-1.12	142082	126849	mitosis, sister chromatid cohesion (putative)	unknown
YGR030C	POP6______	-1.15	250421	217763	tRNA processing	RNase P and RNase MRP subunit
YHR044C	DOG1______	+1.34	353751	472338	2-deoxyglucose resistance	2-deoxyglucose-6-phosphate phosphatase
YIR015W	RPR2______	-1.25	133273	106681	tRNA processing	RNase P subunit
YJR071W	__________	-1.80	287150	159397	unknown	unknown
YKR068C	BET3______	+1.11	561477	620490	secretion	SNARE docking complex assembly
YLR225C	__________	+1.37	328667	448855	unknown	unknown
YNL008C	__________	+1.07	686708	735039	unknown	unknown; similar to Mdj2p, E. coli DnaJ, and other DnaJ-like
YNR047W	__________	-1.63	1001894	616043	unknown	unknown
YOR126C	IAH1______	+1.08	356888	386086	unknown	isoamyl acetate hydrolytic enzyme
YPL102C	__________	-1.27	140313	110192	unknown	unknown
YPR193C	HPA2______	-1.13	131010	116199	chromatin structure	histone acetyltransferase complex subunit
YAL021C	CCR4______	-1.04	90270	87027	catabolite repression	component of CCR4 transcriptional complex
YBR185C	MBA1______	-1.16	208448	179933	respiration	mitochondrial respiratory complex assembly
YCRX15W	__________	-1.13	110083	97466
YDR056C	__________	-1.24	632209	508146	unknown	unknown
YDR423C	CAD1______	-1.08	250606	231804	transcription	basic leu zipper transcription factor
YER118C	SHO1______	-1.27	416568	327286	signaling, high osmolarity pathway	transmembrane osmosensor
YGL116W	CDC20_____	-1.13	256344	227373	mitosis	activator of the anaphase promoting complex
YGR223C	__________	+1.11	246600	274844	unknown	unknown
YIL019W	__________	-2.06	525018	255368	unknown	unknown
YJL117W	PHO86_____	+1.02	862202	881337	transport	inorganic phosphate permease
YKL113C	RAD27_____	-1.09	357130	328002	DNA repair	ssDNA endonuclease
YLR047C	__________	-1.20	117023	97498	unknown	unknown
YLR419W	__________	-1.36	399566	293147	unknown	unknown; similar to pre-mRNA splicing factors
YNL208W	__________	+2.88	1045700	3008788	unknown	unknown
YOL112W	MSB4______	+1.24	371135	460931	unknown	unknown; suppresses bud emergence defect
YOR324C	__________	+1.05	134755	140989	unknown	unknown
YPR019W	CDC54_____	-1.16	288108	248066	DNA replication	MCM initiator complex
YBL112C	__________	-1.48	160285	108627	unknown	unknown
YCL020W	__________	+1.28	1370872	1750936	unknown	unknown
YDL116W	NUP84_____	-1.14	268906	236291	nuclear protein targeting	nuclear pore protein
YEL019C	MMS21_____	-1.10	114214	103898	DNA repair	unknown
YHR055C	CUP1-2____	-2.47	4355957	1762260	Cu2+ ion homeostasis	metallothionein
YIR024C	GIF1______	-1.05	271022	258376	cell cycle, G1	unknown
YJR084W	__________	-1.27	281051	221634	unknown	unknown; similar to human sodium channel protein HI
YKR080W	MTD1______	-1.32	900098	683794	nucleotide metabolism	NAD-dependent 5,10-methylenetetrahydrafolate dehydrogenase
YLR235C	__________	-1.18	117806	99557	unknown	unknown
YML104C	MDM1______	-1.09	143358	131726	cytoskeletal organization	intermediate filament protein
YNL020C	ARK1______	+1.05	368475	386359	unknown	protein kinase
YNR059W	MNT4______	+1.10	154938	170344	protein glycosylation	mannosyltransferase
YOR138C	__________	-1.01	228316	225146	unknown	unknown
YPL114W	__________	-1.19	174151	145919	unknown	unknown
YAL032C	PRP45_____	-1.19	175109	146632	mRNA splicing	U2, U5, U6 snRNP protein
YBR197C	__________	-1.26	168480	133253	unknown	unknown
YDR068W	DOS2______	-1.15	326045	284303	unknown	unknown
YDR435C	PPM1______	+1.02	210578	215240	protein modification	carboxymethyltransferase
YER129W	PAK1______	-1.08	134932	124585	DNA replication	protein kinase; suppresses pol. alpha mutations
YGL128C	__________	-1.04	544295	524728	unknown	unknown; similar to E. coli DnaJ and other DnaJ-like
YGR235C	__________	+1.07	645064	693147	unknown	unknown
YIL031W	ULP2______	-1.07	143511	134016	unknown	unknown; suppresses mif2 mutation
YJL129C	TRK1______	-1.14	420784	368668	transport	potassium permease
YKL125W	RRN3______	-1.18	306018	259866	transcription	RNA polymerase I transcription factor
YLR059C	REX2______	-1.14	364081	318921	RNA processing	RNA exonuclease
YLR429W	CRN1______	+1.03	522488	538895	cytoskeleton	coronin
YMR164C	MSS11_____	+1.11	2153140	2383618	starch metabolism	(putative) transcriptional repressor
YNL220W	ADE12_____	-1.43	2904068	2032413	purine biosynthesis	adenylosuccinate synthetase
YOL124C	__________	-1.53	854071	559278	unknown	unknown
YOR336W	KRE5______	-1.04	520157	502142	cell wall biogenesis	unknown; ER resident glycoprotein
YPR031W	__________	-1.40	491503	352286	unknown	unknown; similar to human zinc finger protein PIR:JC2069
YBR011C	IPP1______	-1.09	4087425	3737419	phosphate metabolism	inorganic pyrophosphatase, cytoplasmic
YCL032W	STE50_____	-1.20	236447	197102	signaling	pheromone response
YDL128W	VCX1______	-1.21	489288	404008	transport	vacuolar H+/Ca(2+) exchanger
YDR251W	PAM1______	+1.02	215994	219621	unknown	unknown; overexpression suppresses PP2A depletion
YEL031W	SPF1______	-1.18	110534	93906	transport	(putative) Ca(2+) ATPase
YFR048W	__________	-1.06	196959	185244	unknown	unknown
YGR049W	SCM4______	-1.67	491356	294999	cell cycle	suppresses cdc4 mutation
YHR065C	RRP3______	-1.25	589815	473628	rRNA processing	RNA helicase
YIR036C	__________	+1.35	244821	329756	unknown	unknown; similar to proteins of the short-chain alcohol
YJR095W	SFC1______	-1.16	128020	110334	transport	mitochondrial succinate-fumarate carrier
YKR092C	SRP40_____	-1.10	893709	810860	transcription (putative)	Suppressor of mutant AC40 subunit of RNA polymerase I and III
YLR247C	__________	+1.13	346618	390289	unknown	unknown; similar to Rad16p
YML116W	ATR1______	-1.51	373234	247027	aminotriazole resistance	transporter (putative)
YNL032W	SIW14_____	-1.02	455559	448715	cell cycle	tyrosine phosphatase
YNR071C	__________	-1.07	144873	135960	unknown	unknown; similar to UDPglucose 4-epimerase
YOR148C	SPP2______	+1.02	319417	326844	mRNA splicing	spliceosome-associated protein
YPL126W	NAN1______	-1.47	1091709	741977	unknown	unknown; nucleolar protein
YAL042W	ERV46_____	-1.21	674739	559731	unknown	unknown; ER vesicle protein
YBR209W	__________	-1.10	120895	110188	unknown	unknown
YDR080W	VPS41_____	-1.15	282351	246281	vacuolar protein targeting	component of vacuolar membrane protein complex
YDR447C	RPS17B____	-1.37	10575736	7710317	protein synthesis	ribosomal protein S17B
YER139C	__________	-1.15	213401	186018	unknown	unknown
YGL140C	__________	-1.79	420479	234293	unknown	major facilitator superfamily
YGR247W	__________	-1.08	190921	175971	unknown	unknown
YIL043C	CBR1______	+1.07	1677133	1791049	aminosugars metabolism	cytochrome b reductase
YJL141C	YAK1______	-1.11	303079	272191	signaling	serine-threonine protein kinase
YKL137W	__________	-1.10	273279	248942	unknown	unknown
YLR071C	RGR1______	-1.14	143447	125706	transcription	RNA polymerase II mediator subunit
YLR441C	RPS1A_____	+1.28	15713716	20173610	protein synthesis	ribosomal protein S1A
YNL232W	CSL4______	-1.15	567892	492222	mitosis, chromosome segregation	unknown
YOL136C	PFK27_____	+1.19	454784	540441	fructose metabolism	6-phosphofructo-2-kinase

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YOR346W	REV1______	-1.21	249986	207114	DNA repair	deoxycytidyl transferase
YPR043W	RPL43A____	-1.19	15599936	13095707	protein synthesis	ribosomal protein L34A
YBR021W	FUR4______	-1.06	89979	85159	transport	uracil permease
YCL044C	__________	+1.17	186985	218368	unknown	unknown
YDL138W	RGT2______	-1.02	210401	206167	transport	glucose permease
YEL043W	__________	-1.17	211028	180350	unknown	unknown
YGR061C	ADE6______	-1.27	154198	121456	purine biosynthesis	5'-phosphoribosylformyl glycinamidine synthetase
YHR076W	__________	+1.06	475522	502591	unknown	unknown
YJR107W	__________	+1.35	299231	403644	unknown	unknown; similar to acylglycerol lipase
YKR104W	__________	-1.01	123161	121586	unknown	ATP-binding cassette (ABC) superfamily
YML127W	__________	+1.06	402411	428282	unknown	unknown
YNL042W	BOP3______	-1.18	288324	243331	unknown	unknown; bypass of PAM1
YOR160W	MTR10_____	-1.37	544491	397488	mRNA export	Npl3p import factor
YPL138C	__________	+1.04	316559	328818	unknown	unknown
YAL055W	PEX22_____	+1.06	202457	214886	peroxisome biogenesis (putative)	peroxisomal membrane anchoring protein (puttaive)
YBR221C	PDB1______	-1.10	1156161	1050596	glycolysis	pyruvate dehydrogenase
YDR092W	UBC13_____	-1.01	377399	372695	protein degradation, ubiquitin-mediated	E2 ub.-conjugating enzyme
YDR459C	__________	-1.18	204161	172846	unknown	unknown; similar to protein PIR:S51289
YER149C	PEA2______	-1.20	190893	158693	mating	unknown
YGL152C	__________	-1.08	169931	157416	unknown	unknown; similar to rat G protein-coupled glutamate
YGR259C	__________	-1.08	125620	116679	unknown	unknown
YIL055C	__________	+1.07	213986	228496	unknown	unknown
YJL153C	INO1______	+1.03	117507	120824	inositol biosynthesis	L-myo-inositol-1-phosphate synthase
YKL149C	DBR1______	-1.12	257995	229764	mRNA splicing	debranching enzyme
YLR083C	EMP70_____	-1.17	144848	123963	secretion (putative)	endosomal membrane protein
YLR453C	RIF2______	-1.02	160496	157234	silencing	RAP1-interacting protein
YMR186W	HSC82_____	-1.11	4866872	4367889	protein folding	chaperonin
YNL244C	SUI1______	+1.04	3757827	3892157	protein synthesis	translation initiation factor 3 (eIF3)
YOL148C	SPT20_____	-1.04	384297	371035	chromatin structure	histone acetyltransferase complex subunit
YOR358W	HAP5______	-1.05	295094	279914	respiration	transcription factor
YPR055W	SEC8______	+1.06	159250	169083	secretion	exocyst complex subunit
YBR033W	__________	-1.03	88246	85337	unknown	unknown; similar to transcription factors, has Zn[2]-Cys[6] cluster domain
YCL056C	__________	+1.06	288595	307040	unknown	unknown
YDL150W	RPC53_____	-1.62	703041	433253	transcription	RNA polymerase III 47 kD subunit
YDR271C	__________	+1.01	175243	176236	unknown	unknown
YEL055C	POL5______	-1.17	194782	166492	DNA replication	DNA polymerase V
YGR073C	__________	-1.11	183762	165329	unknown	unknown
YHR087W	__________	+2.43	154126	374729	unknown	unknown
YJR119C	__________	-1.08	157057	145939	unknown	unknown; similar to human retinoblastoma binding protein 2
YLR267W	BOP2______	-1.07	150254	140979	unknown	unknown; bypass of PAM1
YNL054W	VAC7______	+1.11	610321	680147	vacuole biogenesis	unknown; vacuolar integral membrane protein
YOR172W	__________	+1.04	128580	133114	unknown	unknown; similar to transcription factors
YPL150W	__________	+1.07	117850	125647	unknown	unknown
YAL066W	__________	-1.08	108754	100404	unknown	unknown
YBR233W	PBP2______	-1.14	207059	180894	unknown	interacts with Pab1p
YDR102C	__________	-1.08	104358	96652	unknown	unknown
YDR471W	RPL27B____	-1.31	13077445	9977142	protein synthesis	ribosomal protein L27B
YGL164C	__________	-1.12	138396	123698	unknown	unknown
YGR271W	__________	-1.08	340247	315344	unknown	unknown; similar to Ski2p
YJL165C	HAL5______	-1.06	357920	336689	salt tolerance	putative protein kinase
YKL161C	__________	+3.84	165271	635301	unknown	putative protein kinase
YLR095C	IOC2______	+1.03	273874	280872	unknown	unknown
YLR465C	__________	-1.16	136434	117201	unknown	unknown
YMR197C	VTI1______	+1.37	370297	508382	secretion	cis-Golgi v-SNARE
YNL256W	FOL1______	-1.66	631770	381410	folate biosynthesis	dihydroneopterin aldolase, dihydro-6-hydroxymethylpterin pyrophosphokinase, dihydropteroate synthetase
YOL160W	__________	+1.06	128731	136132	unknown	unknown
YOR370C	MRS6______	+1.08	761176	820334	protein processing	Rab geranylgeranyltransferase regulatory subunit
YPR067W	ISA2______	+1.37	285259	390358	unknown	unknown; Iron Sulfur Assembly -- IscA/NifA homolog
YBR045C	GIP1______	-1.04	88298	85209	glucose repression	(putative) Glc7p regulatory subunit
YCL068C	__________	-1.07	100173	93252	unknown	unknown
YDL162C	__________	-1.09	100510	92628	unknown	unknown
YDR283C	GCN2______	-1.26	313986	249327	protein synthesis	eIF2alpha kinase
YEL066W	HPA3______	+1.53	260647	398389	chromatin structure	histone acetyltransferase complex subunit
YGR085C	RPL11B____	+1.04	15711867	16287704	protein synthesis	ribosomal protein L11B
YHR099W	TRA1______	-1.28	548972	429305	unknown	unknown; similar to human TR-AP
YJR131W	MNS1______	-1.10	279227	253796	protein glycosylation	specific alpha-mannosidase
YLR279W	__________	-1.54	202821	131984	unknown	unknown
YMR018W	__________	+1.01	159830	161192	unknown	unknown; similar to Pex5p/Pas10p (GB:Z49211)
YNL064C	YDJ1______	-1.05	3688568	3501582	mitochondrial and ER protein targeting	HSP70 associated chaperone
YOR184W	SER1______	-1.51	2119673	1404360	serine biosynthesis	phosphoserine
YPL162C	__________	-1.10	210175	190316	unknown	unknown
YAR018C	KIN3______	-1.51	305470	201900	unknown	protein kinase
YBR245C	ISW1______	-1.23	149054	121337	unknown	unknown; similar to Drosophila nucleosome remodeling
YDR114C	__________	-1.09	149614	137198	unknown	unknown
YDR483W	KRE2______	+1.35	1383593	1866279	protein glycosylation	alpha-1,2-mannosyltransferase
YER170W	ADK2______	+1.00	205393	205845	purine metabolism	adenylate kinase,
YGL176C	__________	+1.07	165124	177227	unknown	unknown; similar to Discopyge ommata Ca++ channel alpha1
YGR283C	__________	+1.02	709532	724076	unknown	unknown
YIL076W	SEC28_____	+1.56	1186193	1855936	secretion	vesicle coat component
YJL177W	RPL17B____	+1.03	15868556	16297013	protein synthesis	ribosomal protein L17B
YKL173W	SNU114____	-1.34	505245	377889	mRNA splicing	U5 snRNP protein
YLR107W	REX3______	+1.39	274879	381461	RNA processing	RNA exonuclease
YMR209C	__________	-1.31	351650	268514	unknown	unknown
YNL268W	LYP1______	-1.18	312241	264081	transport	lysine permease
YOR006C	__________	-1.53	758265	494575	unknown	unknown
YOR382W	__________	-1.32	338521	256913	unknown	unknown
YPR079W	__________	-1.03	291903	284570	unknown	unknown
YBR057C	MUM2______	-1.48	382960	258417	meiosis	unknown; similar to ubiquitin C-terminal hydrolase
YCLX07W	__________	-1.25	137379	109704
YDL174C	DLD1______	-1.13	638543	563749	pyruvate metabolism	D-lactate dehydrogenase
YDR295C	PLO2______	-1.10	118469	107797	unknown; ploidy-related	unknown
YEL077C	__________	+1.12	814763	911110	unknown	unknown
YGR097W	ASK10_____	+1.02	196894	200851	stress response	enhancer of SKN7-dependent transcription
YHR111W	__________	-1.13	752545	668591	unknown	unknown; similar to Uba1p and molybdopterin biosynthesis
YJR143C	PMT4______	-1.07	776167	723196	protein glycosylation	dolichyl phosphate-D-mannose:protein O-D-mannosyltransferase
YLR290C	__________	+1.27	259537	330441	unknown	unknown
YMR030W	__________	+1.10	177646	195817	unknown	unknown
YNL076W	MKS1______	-1.08	288061	266722	signaling, Ras pathway	negative regulator of cAMP-dependent genes
YOR194C	TOA1______	-1.10	629503	574442	transcription	TFIIA 32 kD subunit
YPL174C	NIP100____	-1.16	132241	113636	nuclear protein targeting	(putative) large subunit of dynactin complex

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YAR040C	__________	-1.22	116508	95621
YBR257W	POP4______	+1.01	279018	282141	rRNA and tRNA processing	RNase P and RNase MRP subunit
YDR126W	__________	-1.17	164850	140698	unknown	unknown
YDR495C	VPS3______	-1.10	322393	291785	vacuolar protein targeting	unknown
YER181C	__________	-1.44	313103	218145	unknown	unknown
YGL188C	__________	+1.11	380372	421241	unknown	unknown
YGR295C	COS6______	+1.12	1853933	2082954	unknown	unknown; similar to other subtelomerically-encoded proteins
YIL087C	__________	+1.17	294132	343846	unknown	unknown
YJL189W	RPL39_____	-1.21	6787170	5613809	protein synthesis	ribosomal protein L39
YKL185W	ASH1______	+1.35	720258	975513	mating type switching	transcription factor
YLR119W	SRN2______	-1.01	116668	115775	RNA export, putative	unknown
YMR221C	__________	-1.14	548117	478845	unknown	major facilitator superfamily
YNL280C	ERG24_____	-1.21	163817	135311	sterol metabolism	C-14 sterol reductase
YOR018W	ROD1______	+1.14	337271	385417	drug resistance	unknown
YOR394W	__________	+1.22	264142	321255	unknown	unknown; similar to PAU1 family
YPR091C	__________	+1.10	137033	151303	unknown	unknown
YBR069C	TAT1______	-1.23	360819	292572	transport	amino acid permease
YCR007C	__________	-1.05	167527	159139	unknown	unknown; similar to subtelomerically-encoded proteins
YDL186W	__________	-1.15	166406	144863	unknown	unknown
YDR307W	__________	+1.02	221399	226726	unknown	unknown; similar to Pmt1p
YER010C	__________	+1.03	303418	312551	unknown	unknown
YGR109C	CLB6______	-1.16	177582	153673	cell cycle	B-type cyclin; S phase
YHR123W	EPT1______	-1.09	2028688	1854544	phospholipid metabolism	sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferase
YJR155W	AAD10_____	-1.13	417609	368296	unknown	hypothetical aryl-alcohol dehydrogenase
YLR302C	__________	-1.15	125707	109611	unknown	unknown
YMR041C	__________	+1.32	220369	290400	unknown	unknown
YNL088W	TOP2______	-1.07	1029133	965306	DNA replication	DNA topoisomerase II
YOR206W	__________	-1.54	706011	458618	unknown	unknown
YPL185W	__________	-1.04	140595	135223	unknown	unknown
YBL006C	__________	-1.15	377399	328936	unknown	unknown
YBR269C	__________	+1.50	208394	313137	unknown	unknown
YDL008W	APC11_____	-1.07	113211	106112	mitosis	anaphase promoting complex subunit
YDR138W	HPR1______	-1.08	99971	92618	mitosis, recombination	related to topoisomerase
YDR507C	GIN4______	-1.20	460126	382085	cell cycle (growth inhibitor)	protein kinase
YFL006W	__________	+1.14	511470	580990	unknown	unknown
YGL200C	EMP24_____	+1.06	1951985	2068080	secretion	vesicle coat component
YIL099W	SGA1______	-1.04	126570	121457	sporulation	glucan 1,4-alpha-glucosidase
YJL201W	ECM25_____	-1.25	240539	192026	cell wall biogenesis	unknown
YKL197C	PEX1______	-1.14	161844	142546	peroxisome biogenesis	ATPase (putative)
YLR131C	ACE2______	+1.04	87243	90301	transcription	CUP1 regulator
YML008C	ERG6______	-1.28	4653459	3640765	sterol metabolism	S-adenosyl-methionine delta-24-sterol-c-methyltransferase
YMR233W	__________	-1.33	275058	207518	unknown	unknown; similar to Bud7p
YNL290W	RFC3______	-1.21	617839	512250	DNA replication	replication factor C 40 kD subunit
YOR030W	DFG16_____	-1.02	129414	126772	invasive growth	unknown
YPL008W	CHL1______	-1.20	171545	142485	mitosis	kinetochore protein, DEAH box family
YPR103W	PRE2______	+1.02	1319626	1344122	protein degradation	20S proteasome subunit (beta5)
YBR081C	SPT7______	+1.01	134517	135935	chromatin structure	histone acetyltransferase complex subunit
YCR019W	MAK32_____	-1.25	188658	151463	dsRNA virus propagation	unknown
YDL198C	YHM1______	-1.10	452188	410085	transport	mitochondrial carrier family
YDR317W	__________	-1.13	187340	165964	unknown	unknown
YER020W	GPA2______	-1.04	227251	218163	signaling	G protein alpha subunit
YGL008C	PMA1______	-1.04	4522491	4334555	H+ homeostasis	plasma membrane H+-ATPase
YGR119C	NUP57_____	-1.13	514209	456894	nuclear protein targeting	nuclear pore protein
YHR134W	__________	+1.03	259031	266318	unknown	unknown
YJL008C	CCT8______	-1.37	1211403	886412	protein folding	cytoplasmic chaperonin complex
YKL007W	CAP1______	+1.51	685260	1035485	cytoskeleton	actin capping protein subunit
YLL008W	DRS1______	-1.85	838793	454358	rRNA processing	RNA helicase
YLR313C	SPH1______	-1.07	106818	99394	bud site selection, bipolar	unknown; interacts with MAPKKs
YMR051C	__________	+1.13	3693100	4175250	unknown	unknown
YNL100W	__________	-1.03	506625	491068	unknown	unknown
YOL008W	__________	-1.01	285723	282378	unknown	unknown
YOR218C	__________	-1.26	536408	424245	unknown	unknown
YPL197C	__________	-1.06	991018	931326	unknown	unknown
YBL018C	POP8______	-1.35	300666	222301	tRNA processing	RNase P and RNase MRP subunit
YBR281C	__________	-1.14	134790	117980	unknown	unknown
YDL020C	RPN4______	+1.02	376328	384092	protein degradation, ubiquitin-mediated	26S proteasome subunit
YDR150W	NUM1______	+1.04	91674	95176	mitosis, nuclear migration	unknown
YDR519W	FKB2______	+1.29	422675	546094	protein folding	peptidyl-prolyl cis-trans isomerase
YFL015C	__________	-1.13	132992	117239	unknown	unknown
YGL212W	VAM7______	-1.40	154902	110350	vacuole biogenesis	unknown; regulator
YHL016C	DUR3______	-1.04	134199	129655	transport	urea permease
YIL110W	__________	-1.34	560291	419662	unknown	unknown
YJL213W	__________	-1.26	216083	171411	unknown	unknown; similar to Nocardia aryldialkylphosphatase
YKL209C	STE6______	-1.01	98949	98264	mating	a-factor exporter (ABC superfamily)
YLR143W	__________	-1.27	193009	151792	unknown	unknown; similar to Mmd1p
YNL302C	RPS19B____	-1.21	15578227	12848059	protein synthesis	ribosomal protein S19B
YOR042W	__________	+1.17	608865	709648	unknown	unknown
YPL020C	ULP1______	+1.02	255093	260121	protein degradation	Ubl (ubiquitin-like protein) - specific protease
YPR115W	__________	-1.33	174759	131673	unknown	unknown
YBR091C	MRS5______	-1.07	99336	92454	mitochondrial protein targeting	inner membrane carrier protein
YCR029C	RIM1______	+1.17	119177	139651
YDL210W	UGA4______	-1.08	117535	108789	transport	GABA-specific permease
YDR329C	PEX3______	-1.09	204598	188059	peroxisomal protein targeting	integral membrane protein
YER032W	FIR1______	-1.20	184902	153579	mRNA 3'-end processing	unknown
YGL020C	__________	+1.01	436187	439790	unknown	unknown
YGR131W	__________	-1.11	149236	134677	unknown	unknown
YHR144C	DCD1______	-1.08	344941	319497	pyrimidine metabolism	deoxycytidylate deaminase
YJL020C	__________	-1.03	295345	287534	unknown	unknown
YKL019W	RAM2______	+1.04	436330	454686	protein processing	protein farnesyltransferase, alpha subunit
YLL020C	__________	-1.10	175636	159779	unknown	unknown
YLR325C	RPL38_____	-1.47	10339518	7015967	protein synthesis	ribosomal protein L38
YNL112W	DBP2______	-1.77	6712890	3793026	mRNA decay	RNA helicase
YOL020W	TAT2______	-1.15	835423	728062	transport	tryptophan permease
YOR230W	WTM1______	+2.55	909775	2318257	meiosis	transcription factor
YPL209C	IPL1______	-1.07	214573	201272	mitosis, chromosome segregation	protein kinase
YBL030C	PET9______	+1.21	1607531	1944070	transport	mitochondrial ADP/ATP translocator
YBR293W	__________	-1.15	172589	150131	unknown	major facilitator superfamily
YDL032W	__________	-1.18	115379	98114	unknown	unknown
YDR162C	NBP2______	-1.01	226362	223848	unknown	interacts with Nap1p
YDR531W	__________	-1.29	428562	331497	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YFL025C	BST1______	-1.11	165166	148647	secretion	negative regulator of COPII vesicle formation
YGL224C	__________	+1.16	350202	404492	unknown	unknown
YHL028W	WSC4______	-1.58	280138	177428	cell wall integrity and stress response	unknown
YIL122W	__________	+1.27	176054	223331	unknown	unknown
YJR001W	__________	+1.18	500440	589389	unknown	major facilitator superfamily
YKL221W	__________	-1.12	125382	111898	unknown	unknown; similar to mammalian monocarboxylate
YLR155C	ASP3-1____	+18.76	148822	2791372	asparagine utilization	L-asparaginase II
YML029W	__________	+1.07	167432	178463	unknown	unknown
YMR257C	PET111____	-1.11	167760	150529	protein synthesis	translation activator of COX2
YNL314W	DAL82_____	-1.04	248214	237824	transcription	activator of allantoin catabolic genes
YOR054C	__________	-1.01	623102	619469	unknown	unknown
YPL032C	SVL3______	-1.05	196703	187688	unknown	unknown; styryl dye vacuolar localization
YPR127W	__________	+1.39	249344	345789	unknown	unknown; similar to auxin-induced protein PIR:S16390
YBR103W	SIF2______	-1.11	216338	194877	silencing (telomere)(putative)	unknown
YCR040W	MATALPHA1_	-1.12	108349	97016	transcription	alpha-specific gene activator
YDL222C	__________	-1.59	170061	106772	unknown	unknown; similar to Sur7p
YDR341C	__________	-1.54	1250164	814420	protein synthesis	tRNA synthetase, arginine
YER043C	SAH1______	-1.24	3040369	2459583	methionine biosynthesis	S-adenosyl-L-homocysteine hydrolase
YGL032C	AGA2______	-1.16	143242	123578	mating	a-agglutinin binding subunit
YGR143W	SKN1______	-1.05	145263	138755	cell wall biogenesis	(1->6)-beta-glucan synthase subunit
YHR156C	__________	-1.03	179091	173743	unknown	unknown
YJL032W	__________	+1.29	243660	315202	unknown	unknown
YKL031W	__________	-1.27	137471	108100	unknown	unknown
YLL032C	__________	+1.09	273134	296662	unknown	unknown
YLR337C	VRP1______	+1.09	1032573	1126065	cytoskeleton	verprolin
YMR074C	__________	+1.03	934433	958471	unknown	unknown
YNL124W	__________	-1.56	1398990	897238	unknown	unknown
YOL032W	__________	-1.07	242771	226230	unknown	unknown
YOR242C	SSP2______	-1.13	237424	209853	sporulation	unknown; similar to class II family of aminoacyl-tRNA synthetases
YPL221W	BOP1______	+2.22	324904	722845	unknown	unknown; bypass of PAM1
YBL042C	FUI1______	-1.38	306754	221688	transport	uridine permease
YDL044C	MTF2______	+1.01	93264	94497	mRNA splicing, mitochondrial	unknown
YDR172W	SUP35_____	-1.23	1034726	841844	protein synthesis	translation release factor
YDR543C	__________	-1.08	124484	115141	unknown	unknown; similar to other subtelomerically-encoded proteins
YFL035C	__________	-1.13	402364	357393
YGL235W	__________	-1.20	121508	100868	unknown	unknown
YHL039W	__________	-1.34	559370	416269	unknown	unknown
YIL134W	FLX1______	-1.01	240190	238426	transport	FAD mitochondrial carrier
YJR012C	__________	+1.05	211866	222396	unknown	unknown
YKR008W	RSC4______	-1.13	299025	265725	chromatin structure	chromatin remodeling complex subunit
YLR165C	__________	+1.22	170366	208104	unknown	unknown
YMR269W	__________	-1.46	461333	316534	unknown	unknown
YNL326C	__________	+1.15	257418	295151	unknown	unknown; similar to Akr1p and Ydr126p
YOR066W	__________	-1.19	246761	206701	unknown	unknown
YPL044C	__________	-2.40	296679	123364	unknown	unknown
YBR114W	RAD16_____	+1.06	165230	175879	DNA repair, nucleotide excision	NEF4 component
YCR052W	RSC6______	-1.31	374332	285175	chromatin structure	chromatin remodeling complex subunit
YDL234C	GYP7______	+1.28	169321	217335	vacuole inheritance	GTPase-activating protein for Ypt7p
YDR353W	TRR1______	+1.03	1368972	1415140	pyrimidine metabolism	thioredoxin reductase
YER053C	__________	+1.07	262602	279941	unknown	unknown; similar to C. elegans mitochondrial phosphate
YGL044C	RNA15_____	-1.35	382448	282300	mRNA 3'-end processing	cleavage/polyadenylation factor CF I component
YGR155W	CYS4______	-1.18	2000104	1693465	methionine biosynthesis	cystathionine beta-synthase
YHR168W	__________	-1.44	221606	154329	unknown	unknown
YJL045W	__________	-1.48	233999	158460	unknown	unknown; similar to succinate dehydrogenase flavoprotein
YKL042W	SPC42_____	-1.06	103205	97184	cytoskeleton	spindle pole body component
YLL044W	__________	-1.53	6095167	3994931	unknown	unknown
YLR349W	__________	-1.26	196043	156130	unknown	unknown
YNL136W	__________	-1.01	364757	362611	unknown	unknown; similar to mature-parasite-infected
YOL044W	PEX15_____	+1.08	193717	208740	peroxisome biogenesis	integral membrane protein
YOR254C	SEC63_____	-1.10	1500546	1364335	secretion	ER protein translocation subcomplex subunit
YPL233W	__________	-1.09	249536	228813	unknown	unknown
YBL054W	__________	-1.08	145159	134550	unknown	unknown
YDL056W	MBP1______	-1.11	246867	222218	cell cycle	transcription factor
YDR183W	PLP1______	-1.05	223486	213420	unknown	unknown; similar to phosducin
YFL047W	__________	-1.20	207456	172440	unknown	unknown; similar to Rga2p
YGL247W	__________	+1.05	193385	203656	unknown	unknown
YHL050C	__________	+1.32	1454585	1924651	unknown	unknown; similar to other subtelomerically-encoded proteins
YIL146C	ECM37_____	-1.08	188155	174201	cell wall biogenesis	unknown
YJR024C	__________	-1.34	544535	406923	unknown	unknown
YKR020W	__________	-1.02	243303	237917	unknown	unknown
YLR177W	__________	+1.18	702080	825870	unknown	unknown
YML048W	GSF2______	+1.04	311487	324334	glucose repression	unknown
YMR281W	GPI12_____	+1.05	309405	324303	protein processing (putative)	N-acetylglucosaminylphosphatidylinositol de-N-acetylase
YNL338W	__________	-1.61	426341	264722	unknown	unknown
YOR078W	__________	-1.15	1403468	1218382	unknown	unknown
YPL056C	__________	-1.13	198216	174977	unknown	unknown
YPR149W	NCE102____	-1.09	729151	666443	secretion, non-classical	unknown
YBR126C	TPS1______	+1.77	564364	1001660	trehalose metabolism	trehalose-6-phosphate synthas
YCR064C	__________	+1.12	125811	141024	unknown	unknown
YDL246C	__________	+1.17	153229	179317	unknown	unknown; similar to Sor1p (SOR1 and YDL246C code for nearly
YDR365C	__________	-1.91	859860	450426	unknown	unknown
YER063W	THO1______	+1.14	721935	824911	transcription (putative)	unknown
YGL056C	SDS23_____	-1.05	497373	475520	unknown	unknown; similar to S. pombe sds23
YGR163W	GTR2______	+1.05	484467	509925	signaling (putative)	small GTPase (putative)
YHR180W	__________	+1.29	166368	214885	unknown	unknown
YJL057C	IKS1______	+1.12	196459	220206	signaling (putative)	protein kinase
YKL054C	VID31_____	-1.08	691203	639316	vacuolar protein targeting (putative)	unknown
YLL056C	__________	-1.20	748595	625594	unknown	unknown; similar to Y. pseudotuberculosis CDP-3,
YLR361C	__________	+1.01	225308	227560	unknown	unknown
YMR096W	SNZ1______	+1.06	254453	270825	unknown	unknown; induced in stationary phase
YNL148C	ALF1______	+1.07	131286	141090	protein folding	alpha-tubulin foldin
YOL054W	__________	+1.06	361761	383101	unknown	unknown
YOR266W	PNT1______	-1.01	361451	357834	pentamidine resistance	unknown
YPL245W	__________	-1.31	544828	415882	unknown	unknown
YBL066C	SEF1______	+1.03	105961	108800	transcription	(putative) transcription factor
YDL068W	__________	-1.03	140263	136195	unknown	unknown
YDR195W	REF2______	-1.21	167781	139112	mRNA 3'-end processing	unknown
YFL059W	SNZ3______	+1.18	224088	264510	unknown	unknown; induced in stationary phase
YGL259W	YPS5______	-1.40	248868	177517	protein degradation	GPI-anchored aspartic protease
YHR010W	RPL27A____	+1.12	15394892	17171690	protein synthesis	ribosomal protein L27A

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YIL157C	__________	-1.01	563049	557414	unknown	unknown
YJR035W	RAD26_____	-1.16	463183	397764	DNA repair	putative helicase
YKR032W	__________	-1.15	181670	157348	unknown	unknown
YLR189C	UGT51_____	+1.10	149659	164340	sterol metabolism	UDP-glycosyltransferases
YML059C	__________	-1.07	490564	458971	unknown	unknown
YNR011C	PRP2______	-1.14	374057	328737	mRNA splicing	RNA helicase, putative
YOR090C	PTC5______	+1.15	289268	332007	unknown	protein phosphatase type 2C
YPL066W	__________	+1.77	462100	819548	unknown	unknown
YBR138C	HDR1______	+1.08	157650	170479	meiosis	unknown
YCR075C	ERS1______	-1.16	213812	184575	secretion (putative)	unknown; suppresses erd1 mutation
YDR010C	__________	-1.08	114523	105589	unknown	unknown
YDR375C	BCS1______	+1.12	212377	238740	respiration	cyt. c iron-sulfur subunit expression
YER072W	NRF1______	+1.32	2350052	3109899	signaling, polarized growth (putative)	negative regulator of Cdc42p
YGL068W	__________	-1.12	939389	841773	unknown	unknown; similar to ribosomal proteins
YGR175C	ERG1______	-1.06	2115126	1998994	sterol metabolism	squalene monooxygenase
YHR192W	__________	+1.13	517471	585378	unknown	unknown
YJL069C	__________	-1.45	516928	356320	unknown	unknown
YKL066W	__________	-1.01	128511	126662	unknown	unknown
YLR001C	__________	+1.09	728262	794984	unknown	unknown
YLR373C	VID22_____	-1.12	184073	164482	vacolar protein targeting (putative)	unknown
YMR108W	ILV2______	-1.29	872294	677667	isoleucine and valine biosynthesis	acetolactate synthase
YNL160W	YGP1______	+9.40	332253	3122323	diauxic shift	unknown; response to nutrient limitation
YOL066C	RIB2______	+1.04	238059	247509	riboflavin biosynthesis	DRAP deaminase
YOR278W	HEM4______	+1.03	332749	343509	heme biosynthesis	uroporphyrinogen III synthase
YPL256C	CLN2______	+1.07	607599	652634	cell cycle	G1/S cyclin
YMR323W	__________	-1.53	236095	154325	unknown	unknown; similar to enolases (phosphopyruvate hydratase)
YBL078C	AUT7______	+1.82	150242	273232	autophagy	microtubule-associated protein (putative)
YDL080C	THI3______	-1.16	145084	125316	thiamine metabolism	alpha-ketoisocaproate carboxylase
YDR207C	UME6______	-1.45	245066	168491	meiosis	transcription factor
YFR003C	__________	+1.18	315583	371451	unknown	unknown
YGR008C	STF2______	+2.25	284950	642282	ATP synthesis	ATPase stabilizing factor
YIL169C	__________	+1.06	1054814	1113612	unknown	unknown
YJR047C	ANB1______	-1.82	11375189	6265500	protein synthesis	translation initiation factor eIF5A
YKR044W	__________	-1.26	527253	420059	unknown	unknown
YLR201C	__________	+1.45	290376	419934	unknown	unknown
YML071C	__________	+1.05	320970	335709	unknown	unknown
YMR303C	ADH2______	+1.04	15585444	16223200	glycolysis	alcohol dehydrogenase II
YNR023W	SNF12_____	-1.03	409901	398825	transcription	component of SWI/SNF global activator complex
YOR102W	__________	+1.15	749838	861578	unknown	unknown
YPL078C	ATP4______	+1.37	1292947	1776247	ATP synthesis	ATPase; F0-ATP synthase subunit 4
YPR169W	__________	-1.37	1547893	1127845	unknown	unknown
YBR150C	TBS1______	-1.09	223785	204743	drug resistance (putative)	unknown; similar to transcription factors, has Zn[2]-Cys[6]
YDR022C	CIS1______	+1.16	135445	156771	microtubule assembly	cik1 suppressor
YDR387C	__________	+1.17	172246	201532	unknown	unknown; similar to Itr1p and Itr2p
YER084W	__________	-1.20	127358	106288	unknown	unknown
YGL080W	__________	+1.02	269461	275653	unknown	unknown
YGR187C	HGH1______	-1.38	876295	634454	unknown	unknown; similar to human Hmg1p and Hmg2p
YHR204W	__________	-1.28	367871	286805	unknown	unknown; similar to alpha-mannosidase and other glycosyl
YJL081C	ARP4______	-1.13	487261	431520	cytoskeleton	actin-related protein
YKL078W	__________	-1.67	286209	171718	unknown	putative RNA helicase
YLR013W	GAT3______	-1.14	131080	115252	transcription (putative)	DNA binding protein, GATA family
YLR385C	__________	+1.01	94586	95091	unknown	unknown
YNL172W	APC1______	+1.01	108882	110335	mitosis	anaphase-promoting complex subunit
YOL078W	__________	+1.13	154555	174984	unknown	unknown
YOR290C	SNF2______	+1.09	615463	671978	transcription	component of SWI/SNF global activator complex
YPL266W	DIM1______	-1.70	1329931	784070	rRNA processing, 18S	dimethyladenosine transferase
YBL090W	MRP21_____	-1.12	323643	287914	protein synthesis	ribosomal protein, mitochondrial
YDL092W	SRP14_____	-1.10	585717	531328	secretion	signal recognition particle subunit
YDR215C	__________	-1.14	131557	115300	unknown	unknown
YFR015C	GSY1______	+1.39	149459	208166	glycogen metabolism	glycogen synthase
YGR020C	VMA7______	+1.32	693223	917976	vacuolar acidification	vacuolar H+-ATPase V1 domain 14 kDa subunit
YHR033W	__________	-1.00	165110	164975	unknown	unknown; similar to Pro1p
YIR003W	__________	-1.08	310746	289053	unknown	unknown; similar to E. coli and Bacillus subtilis MinD, has
YJR059W	PTK2______	+1.21	288675	350301	polyamine transport	ser/thr protein kinase
YKR056W	RNC1______	-1.19	553116	463672	unknown	endo-exonuclease
YLR213C	CRR1______	-1.24	231702	187219	unknown	unknown; sporulation specific, related to Crh1p
YML083C	__________	-1.50	260364	173419	unknown	unknown
YMR313C	__________	-1.01	511043	504955	unknown	unknown
YNR035C	ARC35_____	+1.30	957285	1243241	cytoskeleton	cortical actin patch integrity
YOR114W	__________	-1.06	292941	276538	unknown	unknown
YPL090C	RPS6A_____	+1.22	15744689	19266719	protein synthesis	ribosomal protein S6A
YPR181C	SEC23_____	-1.02	598277	586141	secretion	vesicle coat component
YBR162C	__________	+1.32	3129914	4125968	unknown	unknown; similar to Aga1p
YCR098C	GIT1______	-1.07	181298	170024	unknown	unknown; similar to phosphate transporter
YDR034C	LYS14_____	+1.03	281718	290206	lysine biosynthesis	transcription factor
YDR399W	HPT1______	-1.57	1693358	1077192	purine biosynthesis	hypoxanthine guanine phosphoribosyl transferase
YER094C	PUP3______	+1.13	1044637	1175983	protein degradation	20S proteasome subunit (beta3
YGL092W	NUP145____	-1.19	331709	278744	nuclear protein targeting	nuclear pore protein
YGR199W	PMT6______	-1.00	358800	358419	protein glycosylation	putative O-mannosyltransferase
YJL093C	TOK1______	+1.01	230140	231469	transport	outward-rectifier potassium channel
YKL090W	__________	-1.12	214322	190806	unknown	unknown
YLR025W	SNF7______	+1.02	491642	503278	glucose derepression	unknown
YLR397C	AFG2______	-1.44	258591	179237	unknown	(putative) AAA ATPase
YMR131C	RSA2______	-1.69	997210	590189	ribosome biogenesis	unknown
YNL184C	__________	-1.14	183432	161101	unknown	unknown
YOL090W	MSH2______	+1.28	555092	712889	DNA repair	MutS homolog; mismatch repair
YOR301W	RAX1______	-1.15	189224	164640	cell polarity (putative)	unknown
YPL278C	__________	+1.26	170304	213893	unknown	unknown
YAL010C	MDM10_____	-1.00	136551	136164	mitochondrial biogenesis	(putative) component of actin binding protein complex
YBR174C	__________	-1.15	118693	102951	unknown	unknown
YCRX04W	__________	-1.28	318538	248105
YDR045C	RPC11_____	-1.27	399002	312972	transcription	RNA polymerase III subunit C11
YDR412W	__________	-1.88	625992	333264	unknown	unknown
YER107C	GLE2______	-1.17	462539	394243	nuclear protein targeting	nuclear pore protein
YGL105W	ARC1______	-1.35	1799798	1338010	tRNA aminoacylation	G4 nucleic acid binding protein
YGR212W	__________	-1.09	136627	125571	unknown	unknown
YIL009W	FAA3______	-1.71	624045	365412	fatty acid metabolism	acyl CoA synthase
YJL106W	IME2______	-1.01	141639	140696	signaling, meiosis pathway	serine/threonine protein kinase
YKL102C	__________	+1.03	119750	123215	unknown	unknown; similar to potato lipoxygenase
YLR036C	__________	-1.12	153668	137577	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YLR410W	VIP1______	-1.06	108063	102385	unknown	unknown
YNL197C	WHI3______	-1.09	171990	157521	cell size	unknown
YOL103W	ITR2______	-1.16	524566	452762	transport	inositol permease
YOR313C	SPS4______	+1.13	210154	237244	sporulation	putative cell wall component
YPR008W	__________	+1.04	151047	156966	unknown	unknown; similar to Cup2p and Candida albicans
YBL101W	__________	-3.41	6001045	1761573	unknown	unknown
YCL008C	STP22_____	-1.37	207025	151005	vacuolar protein targeting	unknown; similar to Tsg101 tumor susceptibility gene
YDL105W	QRI2______	-1.20	152561	127547	unknown	unknown
YDR228C	PCF11_____	+1.21	887859	1073483	mRNA 3'-end processing	cleavage/polyadenylation factor CF I component
YEL009C	GCN4______	+1.38	4214981	5831204	amino acid, purine biosynthesis	transcription factor
YFR028C	CDC14_____	-1.26	459030	363610	mitosis	protein phosphatase
YGR031W	__________	-1.44	206049	143366	unknown	unknown
YHR045W	__________	-1.13	353883	312436	unknown	unknown
YIR016W	__________	+1.03	460485	474328	unknown	unknown
YJR072C	__________	-1.43	593918	415290	unknown	unknown
YKR069W	MET1______	-1.07	173165	162017	methionine biosynthesis	siroheme synthase
YLR226W	BUR2______	-1.09	194616	178165	unknown	unknown
YML095C	RAD10_____	-1.08	242133	224930	DNA repair	ssDNA endonuclease
YNL009W	IDP3______	+1.01	140077	141446	TCA cycle	isocitrate dehydrogenase
YNR048W	__________	-1.02	235161	231020	unknown	unknown
YOR127W	RGA1______	+1.05	414598	437289	bud site selection	putative GTPase-activating protein (GAP) for Cdc42p or Rho1p
YPL103C	__________	-1.20	191177	159117	unknown	unknown
YPR194C	__________	+1.00	311831	313249	unknown	sexual differentiation protein family
YAL022C	FUN26_____	-1.11	225971	203323	unknown	unknown
YBR186W	PCH2______	-1.08	113160	104650	meiosis, checkpoint	unknown
YCRX16C	__________	-1.37	2287027	1669837
YDR057W	__________	+1.03	217868	225014	unknown	unknown
YDR424C	DYN2______	+1.16	293918	341275	cytoskeleton	dynein light chain
YER119C	__________	+1.20	214005	257509	unknown	unknown
YGL117W	__________	+1.17	172196	202247	unknown	unknown
YGR224W	AZR1______	-1.09	135973	124485	drug resistance (putative)	unknown; major facilitator superfamily
YIL020C	HIS6______	-1.50	568165	378688	histidine biosynthesis	Phosphoribosyl imidazolecarboxamide isomerase
YJL118W	__________	-1.13	115611	102073	unknown	unknown
YKL114C	APN1______	-1.06	481069	453418	DNA repair	apurinic/apyrimidinic endonuclease
YLR048W	RPS0B_____	-1.34	10573154	7874903	protein synthesis	ribosomal protein S0B
YLR420W	URA4______	-1.30	1685761	1300634	pyrimidine biosynthesis	dihydrooratase
YMR154C	RIM13_____	-1.20	222962	185867	sporulation	proteolytic processing of Rim1p
YNL209W	SSB2______	-1.69	10393837	6146013	translation	cytosolic HSP70
YOL113W	SKM1______	+1.23	237443	292007	unknown	protein kinase
YOR325W	__________	-1.26	160828	127444	unknown	unknown
YPR020W	ATP20_____	+1.04	655322	684244	ATP synthesis	mitochondrial ATP synthase subunit
YBL113C	__________	+1.41	1445312	2043968	unknown	unknown
YCL021W	__________	-1.82	1145874	628361
YDL117W	CYK3______	+1.01	213396	215301	cytokinesis (putative)	unknown
YEL020C	__________	-1.04	162882	156010	unknown	unknown; similar to oxalyl-CoA decarboxylase from
YFR037C	RSC8______	-1.18	888720	754985	chromatin structure	chromatin remodeling complex subunit
YHR056C	__________	-1.34	584242	436430	unknown	putative transcriptional regulator
YIR025W	__________	-1.27	263847	208240	unknown	unknown
YJR085C	__________	+1.74	729734	1272767	unknown	unknown
YKR081C	__________	-1.64	1378668	841337	unknown	unknown
YLR236C	__________	-1.18	137945	116836	unknown	unknown
YML105C	SEC65_____	-1.20	950521	788895	secretion	signal recognition particle subunit
YNL021W	HDA1______	-1.09	184662	169282	chromatin structure	histone deacetylase
YNR060W	FRE4______	-1.55	232624	150361	unknown	unknown; similar to ferric reductases Fre1p and Fre2p
YOR139C	__________	-1.32	164770	124733	unknown	unknown
YPL115C	BEM3______	-1.02	394658	386770	bud emergence	GTPase-activating protein for Cdc42p
YAL033W	POP5______	-1.23	215239	174658	tRNA processing	RNase P and RNase MRP subunit
YBR198C	TAF90_____	-1.20	276785	230584	transcription	TFIID 90 kD subunit
YDR069C	DOA4______	-1.10	232675	210995	protein degradation, ubiquitin-mediated	ubiquitin-specific protease
YDR436W	PPZ2______	+1.10	174332	191679	stress response	ser/thr phosphatase
YER130C	__________	+1.49	276685	412645	unknown	unknown
YGL129C	__________	+1.03	94983	97383	unknown	unknown; similar to crayfish 1,3-beta-D-glucan-binding
YGR236C	__________	-1.22	156671	128215	unknown	unknown
YIL032C	__________	-1.45	186437	128625	unknown	unknown
YJL130C	URA2______	-2.06	4033861	1962367	pyrimidine biosynthesis	carbamoyl-phophate synthetase, aspartate transcarbamylase, and glutamine amidotransferase
YKL126W	YPK1______	+1.31	372164	487147	unknown	protein kinase
YLR060W	FRS1______	-1.13	1143344	1010900	protein synthesis	tRNA synthetase, phenylalanyl, subunit
YLR430W	SEN1______	-1.23	666358	541693	tRNA splicing	RNA helicase, putative
YMR165C	SMP2______	-1.02	112549	110461	respiration; plasmid maintenance	unknown
YNL221C	POP1______	-1.14	514785	452437	rRNA and tRNA processing	RNase P and RNase MRP subunit
YOL125W	__________	-1.53	435109	284804	unknown	unknown
YOR337W	TEA1______	-1.04	140831	135572	transcription	Ty1 enhancer activator
YPR032W	SRO7______	-1.00	120531	120335	signaling (putative)	suppresses rho3 mutant
YBR012C	__________	-1.34	191818	143453	unknown	unknown
YCL033C	__________	+1.24	311808	385219	unknown	unknown; similar to Neisseria pilin
YDL129W	__________	-1.13	152381	135010	unknown	unknown
YDR252W	BTT1______	-1.05	118056	112162	transcription	negative regulator of RNA polymerase II
YEL032W	MCM3______	-1.03	106298	102832	DNA replication	MCM initiator complex
YFR049W	YMR31_____	+1.51	309295	466329	protein synthesis	ribosomal protein, mitochondrial
YGR050C	__________	-1.12	146543	131106	unknown	unknown
YHR066W	SSF1______	-1.24	969886	781784	mating (putative)	unknown
YIR037W	HYR1______	+2.01	767818	1539941	oxidative stress response	glutathione peroxidase
YJR096W	__________	+1.25	173463	216469	unknown	unknown; similar to aldolase reductase
YKR093W	PTR2______	+1.19	393357	468952	transport	small peptide permease
YLR248W	RCK2______	+1.12	380752	428125	unknown	Ca/calmodulin-dependent protein kinase
YNL033W	__________	-1.19	144849	121369	unknown	unknown
YNR072W	HXT17_____	-1.21	165145	136428	transport	hexose permease
YOR149C	SMP3______	-1.08	209568	194739	plasmid maintenance	integral membrane, protein kinase C pathway protein
YPL127C	HHO1______	-1.02	983638	963927	chromatin structure	histone H1
YBR210W	__________	+1.05	245764	257590	unknown	unknown
YDR081C	PDC2______	-1.16	170870	147831	glycolysis	regulator of pyruvate decarboxylase genes
YDR448W	ADA2______	-1.05	135325	128764	chromatin structure	histone acetyltransferase complex subunit
YER140W	__________	-1.02	177852	174309	unknown	unknown
YGL141W	HUL5______	+1.00	95343	95566	protein degradation, ubiquitin mediated	ubiquitin-protein ligase (E3)
YGR248W	SOL4______	+1.09	135987	148212	unknown	unknown; similar to Sol3p
YIL044C	AGE2______	+1.13	438028	493875	secretion	GTPase activating protein for ARFs
YJL142C	__________	+1.30	269178	348702	unknown	unknown
YKL138C	MRPL31____	+1.01	297822	299902	protein synthesis	ribosomal protein, mitochondrial L31
YLR072W	__________	-1.03	128542	124787	unknown	unknown
YLR442C	SIR3______	+1.00	397292	399170	silencing	nuclear protein, reulator of silencing at HML, HMR, telomeres

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YNL233W	BNI4______	-1.10	309500	282049	cytokinesis	may link chitin synthase to septins
YOL137W	__________	-1.08	276784	256534	unknown	major facilitator superfamily
YOR347C	PYK2______	+1.07	499946	533738	glycolysis	pyruvate kinase
YPR044C	__________	+1.31	15799800	20646940	unknown	unknown
YBR022W	__________	-1.10	259118	235005	unknown	unknown
YCL045C	__________	-1.04	641943	617134	unknown	unknown
YDL139C	SCM3______	-1.04	161467	155505	mitosis, chromosome segregation (putative)	unknown
YEL044W	__________	-1.02	196905	193111	unknown	unknown
YGR062C	COX18_____	-1.00	171356	171100	respiration	required for activity of mitochondrial cytochrome oxidase
YHR077C	NMD2______	-1.10	407987	369460	mRNA decay, nonsense-mediated	Nam7p/Upf1p-interacting protein
YJR108W	ABM1______	-1.09	122253	111726	cytoskeleton (putative)	unknown
YKR105C	__________	-1.31	190988	145867	unknown	major facilitator superfamily
YLR257W	__________	+1.44	688614	992459	unknown	unknown
YML128C	__________	+1.86	192856	358000	unknown	unknown
YNL043C	__________	+1.22	821780	1002036	unknown	unknown
YOR161C	__________	+1.02	287897	292285	unknown	unknown
YPL139C	UME1______	-1.03	279372	271874	meiosis	transcription factor
YBR222C	FAT2______	+1.31	158693	208199	transport	peroxisomal (putative) fatty acid transporter
YDR093W	__________	+1.12	1691486	1886701	unknown	unknown; similar to members of Drs2p family of P-type
YDR460W	TFB3______	-1.09	224342	206373	transcription	TFIIH 38 kD subunit
YER150W	SPI1______	+1.74	209332	364525	unknown	unknown; similar to Sed1p; induced in stationary phase
YGL153W	PEX14_____	-1.02	190208	186916	peroxisomal protein targeting	peroxisomal import machinery component
YGR260W	TNA1______	-1.97	838773	425949	transport	nicotinic acid permease
YIL056W	__________	+1.02	287231	294179	unknown	unknown
YJL154C	VPS35_____	+1.14	318380	362481	vacuolar protein targeting	peripheral membrane protein
YKL150W	MCR1______	+1.31	587260	766732	electron carrier	cytochrome-b5 reductase
YLR084C	RAX2______	+1.03	321920	332606	cell polarity (putative)	unknown
YLR454W	__________	+1.17	1943582	2273298	unknown	unknown
YMR187C	__________	+1.02	194819	198459	unknown	unknown
YNL245C	__________	+1.09	369784	403628	unknown	unknown
YOL149W	DCP1______	+1.01	713920	721886	mRNA decay	decapping enzyme
YOR359W	__________	-1.03	159637	155534	unknown	unknown
YPR056W	TFB4______	-1.11	307296	277546	transcription	TFIIH 37 kD subunit
YBR034C	HMT1______	+1.04	937789	975944	protein processing	arginine methyltransferase
YCL057W	PRD1______	-1.05	527636	501108	protein degradation	proteinase yscD
YDL151C	__________	-1.83	270199	147940	unknown	unknown
YDR272W	GLO2______	+1.23	541824	666212	methylglyoxal resistance	glyoxalase II
YEL056W	HAT2______	-1.04	391629	377348	chromatin structure	histone acetyltransferase complex subunit
YGR074W	SMD1______	+1.04	334074	347777	mRNA splicing	U6 snRNP protein
YHR088W	RPF1______	-1.33	733207	553285	unknown	unknown
YJR120W	__________	-1.18	139615	118332	unknown	unknown
YLR268W	SEC22_____	+1.01	746479	752829	secretion	ER-to-Golgi v-SNARE
YMR007W	__________	+2.04	154475	315474	unknown	unknown
YOR173W	__________	+1.09	121548	132609	unknown	unknown
YPL151C	PRP46_____	-1.05	317409	301879	mRNA splicing	unknown
YAL067C	SEO1______	+1.01	91302	91967	drug resistance	suppressor of sulfoxyde ethionine
YBR234C	ARC40_____	+1.07	105568	113409	cytoskeleton	Arp2/3 complex subunit
YDR103W	STE5______	-1.17	195540	166452	signaling, pheromone pathway	scaffold protein for MAP kinase cascade
YDR472W	TRS31_____	-1.05	470955	450629	secretion (putative)	transport protein particle (TRAPP) subunit, 31 kD
YER160C	__________	-1.32	158299	119520	unknown	unknown
YGL165C	__________	+1.39	312278	435041	unknown	unknown
YGR272C	__________	-1.60	585211	365652	unknown	unknown
YIL067C	__________	-1.02	272948	268725	unknown	unknown
YJL166W	QCR8______	+1.38	1214153	1671139	oxidative phosphorylation	ubiquinol--cytochrome-c reductase subunit VIII
YKL162C	__________	+1.01	149058	150510	unknown	unknown
YLR096W	KIN2______	-1.49	657174	442464	unknown	protein kinase
YLR466W	YRF1-4____	+1.33	1886005	2511853	unknown	Y' helicase (subtelomerically-encoded)
YMR198W	CIK1______	-1.02	186046	181831	cytoskeleton	spindle pole body associated protein
YNL257C	SIP3______	+1.15	123058	141914	glucose derepression	(putative) transcriptional activator
YOL161C	__________	+1.26	322312	404624	unknown	unknown; similar to PAU1 family
YOR371C	__________	+1.03	178618	183418	unknown	unknown
YPR068C	HOS1______	+1.09	115274	125727	unknown	unknown; similar to Hda1p, Rpd3p, Hos2p, and Hos3p
YBR046C	ZTA1______	+1.23	118064	144651	unknown	putative quinone oxidoreductase
YCL069W	__________	-1.26	124985	99351	unknown	major facilitator superfamily
YDL163W	__________	-1.12	104390	93557	unknown	unknown
YDR284C	DPP1______	+1.19	276773	328173	phospholipid metabolism	diacylglycerol pyrophosphate phosphatase
YEL067C	__________	+1.00	134840	135116	unknown	unknown
YGR086C	__________	+1.36	3047490	4151421	unknown	unknown
YHR100C	__________	-1.44	506140	352396	unknown	unknown
YJR132W	NMD5______	-1.46	498501	342584	unknown	Nam7p/Upf1p-interacting protein
YLR280C	__________	-1.03	103845	101232	unknown	unknown
YMR019W	STB4______	-1.00	182855	182664	transcription	Sin3-binding protein
YNL065W	__________	+1.67	278580	464731	unknown	major facilitator superfamily
YOR185C	GSP2______	-1.05	2490755	2367719	nuclear organization	GTPase; ran homolog
YPL163C	SVS1______	+1.34	637647	853797	vanadate resistance	unknown
YAR019C	CDC15_____	-1.17	211565	180411	cell cycle	protein kinase
YBR246W	__________	-1.16	234216	202215	unknown	unknown
YDR115W	__________	+1.01	220836	223369	unknown	unknown; similar to prokaryotic L34 ribosomal protein
YDR484W	SAC2______	+1.06	201133	213947	cytoskeleton	suppressor of actin mutation
YER171W	RAD3______	-1.19	268328	225770	transcription; DNA repair	TFIIH subunit
YGL177W	__________	-1.14	145311	127899	unknown	unknown
YGR284C	ERV29_____	+1.44	873755	1257282	secretion (putative)	unknown; transport vesicle protein
YIL077C	__________	+1.14	371718	422217	unknown	unknown
YJL178C	__________	-1.21	1138051	938337	unknown	unknown
YKL174C	__________	-1.05	321533	306250	unknown	unknown; similar to Hnm1p and other permeases
YLR108C	__________	+1.23	129959	159502	unknown	unknown
YMR210W	__________	-1.11	943278	846062	unknown	unknown
YNL269W	__________	+1.14	218447	248155	unknown	unknown
YOR007C	SGT2______	-1.14	2958635	2591228	unknown	unknown
YOR383C	__________	-1.07	636992	596253	unknown	unknown
YPR080W	TEF1______	+1.33	15958128	21215198	protein synthesis	translation elongation factor EF-1 alph
YBR058C	UBP14_____	-1.53	461333	301176	protein degradation, ubiquitin-mediated	ubiquitin-specific protease
YCLX08C	__________	-1.10	126851	115138
YDL175C	__________	-1.01	211103	209923	unknown	unknown
YDR296W	MHR1______	+1.03	205589	211769	recombination, mitochondrial	unknown
YER001W	MNN1______	+1.19	266428	317398	protein glycosylation	alpha-1,3-mannosyltransferase
YGR098C	ESP1______	-1.02	108866	106385	cytoskeleton	spindle pole body duplication
YHR112C	__________	+1.10	350367	385272	unknown	unknown; similar to cystathionine gamma-synthase Str2p
YJR144W	MGM101____	+1.21	1025539	1245448	mitochondrial genome maintenance	(putative) nucleic acid interactor
YLR291C	GCD7______	-1.07	674938	629565	protein synthesis	translation initiation factor eIF2b subunit

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YMR031C	__________	-1.13	328266	290286	unknown	unknown
YNL077W	__________	-1.09	270621	247949	unknown	unknown; similar to E. coli DnaJ and other DnaJ-like proteins
YOR195W	SLK19_____	+1.01	785248	790742	mitosis	unknown; synthetic lethal with kar3
YPL175W	SPT14_____	-1.12	318541	285397	protein processing	N-acetylglucosaminyltransferase (GPI anchor synthesis)
YAR042W	SWH1______	-1.20	126938	105873	unknown	unknown; similar to mammalian oxysterol-binding protein
YBR258C	__________	+1.06	198999	210033	unknown	unknown
YDR127W	ARO1______	-1.04	1190257	1140351	aromatic amino acid biosynthesis	pentafunctional enzyme
YDR496C	__________	-1.42	722284	509070	unknown	unknown
YER182W	__________	+1.15	288846	331771	unknown	unknown
YGL189C	RPS26A____	+1.19	15418516	18424651	protein synthesis	ribosomal protein S26A
YGR296W	YRF1-3____	+1.09	474640	515223	unknown	Y' helicase (subtelomerically-encoded)
YIL088C	__________	+1.45	375016	542478	unknown	unknown; similar to members of the major facilitator
YJL190C	RPS22A____	-1.19	15588425	13150901	protein synthesis	ribosomal protein S22A
YKL186C	MTR2______	+1.09	916000	996731	mRNA export	unknown
YLR120C	YPS1______	+1.17	229482	267501	protein processing	GPI-anchored aspartic protease
YMR222C	__________	-1.11	317897	286124	unknown	unknown; similar to S. pombe DFR1, dihydrofolate reductase
YNL281W	HCH1______	+1.05	1032968	1088292	stress response (putative)	unknown; overexpression suppresses hsp82 mutation
YOR019W	__________	-1.11	221537	199688	unknown	unknown
YPR092W	__________	-1.13	156173	138815	unknown	unknown
YBR070C	__________	+1.28	237715	304730	stress response	osmotolerance protein (putative)
YCR008W	SAT4______	-1.02	268376	264021	salt tolerance	protein kinase
YDL187C	__________	-1.11	119270	107558	unknown	unknown
YDR308C	SRB7______	-1.17	220380	187834	transcription	RNA polymerase II mediator subunit
YER011W	TIR1______	+1.78	1948841	3459967	stress response (putative)	cell wall protein
YHR124W	NDT80_____	-1.59	848094	533271	meiosis	transcription factor
YJR156C	THI11_____	+1.13	186363	210673	pyrimidine biosynthesis	thiamine regulated gene
YLR303W	MET17_____	+1.92	475139	914570	methionine biosynthesis	O-acetylhomoserine sulfhydrylase
YMR042W	ARG80_____	-1.11	221711	200505	arginine metabolism	transcription factor
YNL089C	__________	+1.08	232115	249659	unknown	unknown
YOR207C	RET1______	+1.11	125156	138644	transcription	RNA polymerase III 130 kD subunit
YPL186C	__________	+1.17	144866	169936	unknown	unknown
YBL007C	SLA1______	-1.05	290055	274993	cytoskeleton	cortical actin assembly
YBR270C	__________	-1.02	137568	134435	unknown	unknown
YDL009C	__________	+1.56	206437	322630	unknown	unknown
YDR139C	RUB1______	+1.01	322137	325589	protein degradation	ubiquitin-like protein
YDR508C	GNP1______	+1.24	344477	427208	transport	glutamine permease
YFL007W	BLM3______	-1.62	237757	146888	drug resustance	unknown; major facilitator superfamily
YGL201C	MCM6______	+1.14	85644	97520	DNA replication	MCM initiator complex
YHL007C	STE20_____	-1.00	265858	265133	signaling, pheromone and pseudohyphal growth pathways	serine-threonine protein kinase
YJL202C	__________	-1.13	242223	213771	unknown	unknown
YKL198C	PTK1______	-1.09	134327	122815	polyamine transport	ser/thr protein kinase
YLR132C	__________	+1.01	113231	113911	unknown	unknown
YMR234W	RNH1______	-1.05	315265	299289	DNA replication (putative)	ribonuclease H
YNL291C	MID1______	+1.02	285934	291088	transport	Ca(2+) channel component
YOR031W	CRS5______	+1.18	229149	271383	Cu2+ ion homeostasis	metallothionein-like protein
YPL009C	__________	-1.00	109275	108935	unknown	unknown
YPR104C	FHL1______	-1.20	426235	354990	transcription	transcriptional activator
YBR082C	UBC4______	+1.21	1237952	1494832	protein degradation, ubiquitin-mediated	E2 ub.-conjugating enzyme
YCR020C	MAK31_____	-1.03	218486	212359	dsRNA virus propagation	unknown
YDL199C	__________	+1.00	123777	123899	unknown	unknown; similar to members of the sugar permease family
YDR318W	MCM21_____	+1.17	182284	213963	mitosis, chromosome segregation	unknown
YER021W	RPN3______	+1.27	944423	1196287	protein degradation	26S proteasome regulatory subunit
YGL009C	LEU1______	-1.29	246685	191127	leucine biosynthesis	3-isopropylmalate dehydratase
YGR120C	SEC35_____	-1.12	234243	209972	secretion	peripheral membrane protein required for ER to Golgi vesicle docking
YHR135C	YCK1______	-1.09	762449	699613	unknown	protein kinase
YJL009W	__________	-1.37	1232675	901116	unknown	unknown
YKL008C	LAC1______	-1.00	420574	419006	aging	unknown; similar to Lag1p, has 6 potential transmembrane
YLL009C	COX17_____	-1.01	296616	294941	respiration	cytochrome oxidase assembly
YLR314C	CDC3______	+1.13	363757	412116	cytokinesis	septin
YMR052W	FAR3______	+1.11	155669	173543	cell cycle, pheromone arrest	unknown
YNL101W	__________	+1.05	224173	236399	unknown	unknown; similar to members of a putative transporter family
YOL009C	MDM12_____	+1.08	240027	260049	mitochondrial inheritance	transmembrane protein
YOR219C	STE13_____	+1.11	306901	341582	mating	alpha-factor maturation
YPL198W	RPL7B_____	-1.37	5848246	4282220	protein synthesis	ribosomal protein L7B
YAR068W	__________	-1.09	165404	151622	unknown	unknown; similar to ICWP protein
YBL019W	APN2______	-1.02	105176	103393	DNA repair	exonuclease III homolog (AP endonuclease)
YBR282W	MRPL27____	+1.12	277728	309832	protein synthesis	ribosomal protein, mitochondrial L27
YDL021W	GPM2______	+1.65	117017	192909	glycolysis	phosphoglycerate mutase
YDR151C	CTH1______	-1.13	288743	255419	unknown	unknown
YDR520C	__________	+1.00	128358	128799	unknown	unknown; similar to glycosyl hydrolase
YFL016C	MDJ1______	+1.19	309302	367764	protein folding	chaperone; DnaJ homolog
YGL213C	SKI8______	-1.27	507300	398262	meiosis, recombination	antiviral RNA binding protein
YHL017W	__________	-1.29	361243	279808	unknown	unknown; similar to Ptm1p, member of major
YIL111W	COX5B_____	+2.65	212866	563423	oxidative phosphorylation	cytochrome-c oxidase subunit Vb
YJL214W	HXT8______	-1.09	142198	130743	transport	hexose permease
YKL210W	UBA1______	+1.05	302409	317481	protein degradation, ubiquitin-mediated	E1-like (ub.-activating) enzyme
YLR144C	ACF2______	+1.04	208614	217863	cytoskeleton	cortical actin assembly
YML018C	__________	-1.35	1114319	825953	unknown	unknown
YMR245W	__________	-1.12	329132	293829	unknown	unknown
YNL303W	__________	-1.53	796018	521730	unknown	unknown
YOR043W	WHI2______	-1.05	552466	523994	cell size	unknown
YPL021W	ECM23_____	+1.00	121960	122479	cell wall biogenesis (putative)	unknown
YPR116W	__________	-1.10	117618	106831	unknown	unknown
YBR092C	PHO3______	+1.04	175354	182933	thiamine uptake	acid phosphatase, constitutive
YCR029C	__________	+1.01	782213	789080
YDL211C	__________	-1.17	174204	148337	unknown	unknown
YDR330W	__________	+1.01	227960	229280	unknown	unknown; similar to Undulin extracellular matrix
YER033C	ZRG8______	-1.09	170156	156387	unknown	unknown; zinc regulated
YGL021W	ALK1______	-1.05	103091	98004	DNA repair (putative)	DNA damage-responsive protein
YGR132C	PHB1______	+1.12	819631	916585	antiproliferative protein	unknown
YHR145C	__________	-1.70	5412544	3179354	unknown	unknown
YJL021C	__________	+1.40	478418	671002	unknown	unknown
YKL020C	SPT23_____	-1.20	355679	297592	transcription	transcription factor
YLL021W	SPA2______	-1.16	379437	326330	cytoskeleton	cortical actin patch component
YLR326W	__________	+1.13	185708	209954	unknown	unknown
YMR063W	RIM9______	-1.04	130360	125857	sporulation	stimulates expression of IME1
YNL113W	RPC19_____	-1.17	954420	818865	transcription	subunit common to RNA polymerases I and III
YOL021C	DIS3______	+1.01	94094	95467	RNA processing	3'-5' exoribonuclease complex subunit
YOR231W	MKK1______	-1.08	242617	225311	signaling, PKC1 pathway	MAP kinase (mitogen-activated protein kinase)
YPL210C	SRP72_____	-1.14	606001	532081	secretion	signal recognition particle subunit

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YBL031W	SHE1______	-1.05	117321	111435	unknown	overexpression is lethal
YBR294W	SUL1______	+1.01	133702	134764	transport	sulfate permease
YDL033C	__________	-1.18	152506	128771	unknown	unknown; similar to H. influenza protein HI0174
YDR163W	__________	+1.01	290522	294412	unknown	unknown
YDR532C	__________	-1.11	262467	237382	unknown	unknown
YFL026W	STE2______	-1.15	133788	116768	mating	alpha-factor receptor
YGL225W	GOG5______	-1.03	1552847	1509045	protein glycosylation	Golgi GDP-mannose transporter
YHL029C	__________	+1.07	268661	287537	unknown	unknown
YIL123W	SIM1______	+1.89	1368748	2590645	cell cycle	unknown
YJR002W	MPP10_____	-1.88	1273385	677900	rRNA processing	U3 snoRNP protein
YKL222C	__________	-1.22	184777	151497	unknown	unknown; similar to transcription factors, has Zn[2]-Cys[6]
YLR156W	__________	+1.08	100424	108776	unknown	unknown
YML030W	__________	-1.10	475207	432590	unknown	unknown
YMR258C	__________	-1.04	234027	224073	unknown	unknown
YNL315C	ATP11_____	-1.03	451314	436854	ATP synthesis	F1F0-ATPase complex assembly protein
YOR055W	__________	-1.13	126068	111500	unknown	unknown
YPL033C	__________	-1.01	127188	125699	unknown	unknown
YPR128C	__________	-1.11	288158	260046	unknown	unknown; similar to ADP/ATP carrier proteins
YBR104W	YMC2______	-1.48	501028	338356	transport	mitochondrial carrier family
YCR041W	__________	-1.20	477322	399033	unknown	unknown
YDL223C	__________	-1.05	142672	136385	unknown	unknown
YDR342C	HXT7______	+1.20	2272536	2718296	transport	hexose permease
YER044C	MEI4______	-1.17	148276	126824	meiosis, chromosome pairing and recombination	unknown
YGL033W	HOP2______	-1.08	125671	116548	meiosis, chromosome pairing (putative)	unknown
YGR144W	THI4______	-1.08	126532	116712	thiamine biosynthesis	unknown; biosynthetic enzyme
YHR157W	REC104____	-1.09	143791	131876	meiosis, recombination	ds break formation complex subunit
YJL033W	HCA4______	-1.63	709952	436525	rRNA processing	RNA helicase
YKL032C	IXR1______	+1.12	1252051	1403488	transcription, oxygen-dependent	HMG-transcription factor
YLL033W	__________	+1.13	174731	196657	unknown	unknown
YLR338W	__________	-1.38	158565	114648	unknown	unknown
YMR075W	__________	+1.08	171600	184768	unknown	unknown
YNL125C	ESBP6_____	-1.03	239943	233690	unknown	unknown; similar to mammalian monocarboxylate transporters
YOL033W	MSE1______	+1.01	219372	221007	protein synthesis	tRNA synthetase, mitochondrial, glutamyl
YOR243C	__________	-1.48	713124	481839	unknown	unknown
YPL222W	__________	+1.00	110458	110539	unknown	unknown
YBL043W	ECM13_____	-1.03	120630	117281	cell wall biogenesis	unknown
YDL045C	FAD1______	+1.14	245895	279436	flavin biosynthesis	flavin adenine dinucleotide (FAD) synthetase
YDR173C	ARG82_____	-1.10	251008	229179	arginine metabolism	transcription factor
YDR544C	__________	-1.31	268594	205245	unknown	unknown
YFL036W	RPO41_____	-1.14	256989	225091	transcription	mitochondrial RNA polymerase
YGL236C	MTO1______	-1.17	194202	166314	salt tolerance (putative)	unknown; similar to E. coli gidA protein
YHL040C	ARN1______	-1.22	226484	185073	unknown	unknown; similar to subtelomerically-encoded proteins
YIL135C	__________	+1.03	101966	105061	unknown	unknown
YJR013W	__________	-1.01	285530	281344	unknown	unknown; similar to human angiotensin II type 1b
YKR009C	FOX2______	+1.03	116335	119304	fatty acid metabolism	peroxisomal beta-oxidation protein
YLR166C	SEC10_____	+1.01	206639	208407	secretion	exocyst complex subunit
YMR270C	RRN9______	+1.01	343938	345775	transcription	component of upstream activation factor complex (UAF)
YNL327W	EGT2______	+1.00	126245	126276	cell cycle	unknown
YOR067C	ALG8______	-1.13	566817	501404	protein glycosylation	glycosyltransferase
YPL045W	VPS16_____	-1.04	313682	300358	vacuolar protein targeting	component of sorting nexin complex
YPR138C	MEP3______	+1.29	482552	620547	transport	ammonia permease
YBR115C	LYS2______	-1.24	505999	409280	lysine biosynthesis	L-aminoadipate-semialdehyde dehydrogenase
YCR053W	THR4______	-1.12	1213475	1082039	threonine biosynthesis	threonine synthase
YDL235C	YPD1______	+1.19	569665	676916	signaling	two-component phosphorelay intermediate
YDR354W	TRP4______	-1.17	443552	377831	tryptophan biosynthesis	anthranilate phosphoribosyltransferase
YER054C	GIP2______	-1.19	8677102	7317539	glucose repression	(putative) Glc7p regulatory subunit
YGL045W	__________	-1.21	229894	190415	unknown	unknown
YGR156W	__________	-1.10	289274	263708	unknown	unknown
YHR169W	DBP8______	-1.32	616481	465475	unknown	RNA helicase
YJL046W	__________	-1.22	321639	264652	unknown	unknown; similar to lipoate-protein ligase A
YKL043W	PHD1______	-1.37	559039	407983	pseudohyphal growth	transcription factor
YLL045C	RPL8B_____	-1.24	14226479	11449673	protein synthesis	ribosomal protein L8B
YLR350W	__________	+1.26	577802	725817	unknown	unknown
YMR086W	__________	+1.03	148944	153960	unknown	unknown
YNL137C	NAM9______	-1.08	340365	316218	protein synthesis	ribosomal protein, mitochondrial S4 (putative)
YOL045W	__________	-1.02	485840	477661	unknown	protein kinase
YOR255W	__________	+1.03	134795	138905	unknown	unknown
YPL234C	TFP3______	+1.25	2239804	2793423	vacuolar acidification	vacuolar H+-ATPase V0 domain 17 KD subunit
YBL055C	__________	-1.03	196768	190807	unknown	unknown
YDL057W	__________	+1.15	131949	152386	unknown	unknown
YDR184C	ATC1______	-1.16	425121	366148	cell polarity	member of Bud6p complex
YFL048C	EMP47_____	+1.05	720686	757429	secretion	unknown; ER/Golgi membrane protein
YGL248W	PDE1______	+1.86	299243	556085	purine metabolism	3',5'-cyclic-nucleotide phosphodiesterase
YHR001W	__________	-1.00	459322	457265	unknown	unknown; similar to Ykr003p and members of the oxysterol-binding protein family
YIL147C	SLN1______	-1.25	1184936	945200	signaling	two-component pathway
YJR025C	BNA1______	-1.18	395490	334679	nicotinic acid biosynthesis	3-hydroxyanthranilic acid dioxygenase
YKR021W	__________	-1.02	138503	135362	unknown	unknown
YLR178C	TFS1______	+2.75	226609	622538	cell cycle	suppresses cdc25 mutations
YML049C	RSE1______	+1.12	536935	603283	secretion and RNA splicing	unknown
YMR282C	AEP2______	+1.11	271473	300642	protein synthesis	translation of ATP9/OLI1 mRNA
YNL339C	YRF1-6____	+1.19	105766	125670	unknown	Y' helicase (subtelomerically-encoded)
YOR079C	ATX2______	+1.25	377216	473039	oxidative stress response	manganese-trafficking protein
YPL057C	SUR1______	+2.15	279455	602117	sphingolipid metabolism	suppresses cls2-2and rvs161
YPR150W	__________	-1.01	163274	161134	unknown	unknown
YBR127C	VMA2______	+1.04	528071	548894	vacuolar acidification	58 kD regulatory subunit
YCR065W	HCM1______	+1.03	123049	126206	transcription (putative)	forkhead family of DNA-binding proteins
YDL247W	__________	+1.11	86967	96421	unknown	unknown; similar to maltose permeases including Yjr160p,
YER064C	__________	+1.16	244775	284981	unknown	unknown; similar to members of a putative transporter family
YGL057C	__________	+1.17	200141	233298	unknown	unknown
YGR164W	__________	-1.25	192226	153675	unknown	unknown; similar to Hansenula wingei mitochondrial
YHR181W	__________	+1.07	565696	604640	unknown	unknown
YJL058C	__________	+1.02	168265	171722	unknown	unknown
YKL055C	OAR1______	-1.14	122729	108088	respiration	3-oxo-acyl-(acyl carrier protein) reductase
YLL057C	__________	-1.23	386559	315504	unknown	unknown; similar to C-terminal half E. coli dioxygenase
YLR362W	STE11_____	+1.09	144579	157003	signaling, pheromone and pseudohyphal growth pathways	MAPKKK (mitogen-activated protein kinase kinase kinase)
YMR097C	__________	+1.20	295703	355851	unknown	unknown
YNL149C	__________	-1.12	1247721	1109216	unknown	unknown
YOL055C	THI20_____	+1.11	234637	261362	thiamine metabolism (putative)	unknown; similar to bacterial transcription factors
YOR267C	__________	+1.12	886122	991910	unknown	protein kinase
YPL246C	__________	+1.19	416162	495357	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YBL067C	UBP13_____	-1.11	140651	126227	protein degradation, ubiquitin-mediated	ubiquitin carboxyl-terminal hydrolase
YDL069C	CBS1______	+1.02	199344	203093	protein synthesis	translation activator of COB mRNA (mitochondria)
YDR196C	__________	+1.02	330630	337414	unknown	unknown
YFL060C	SNO3______	-1.12	158745	142321	unknown	unknown; induced in stationary phase
YGL260W	__________	+1.07	118543	127297	unknown	unknown; similar to Yir040p
YHR011W	DIA4______	-1.02	192605	188830	pseudohyphal growth (putative)	unknown
YIL158W	__________	-1.11	794038	718184	unknown	unknown; similar to Ykr100p
YJR036C	HUL4______	+1.13	143804	163105	protein degradation (putative)	ubiquitin-protein ligase (E3)
YKR033C	__________	-1.13	116825	103537	unknown	unknown; similar to Gat1p
YLR190W	__________	+1.36	272063	368867	unknown	unknown
YML060W	OGG1______	-1.12	337526	301915	DNA repair	8-oxoguanine DNA glycosylase
YMR293C	__________	+1.06	171171	180680	unknown	unknown; similar to amidase
YNR012W	URK1______	-1.35	428927	318448	pyrimidine metabolism	uridine kinase
YOR091W	__________	-1.44	804803	558468	unknown	unknown
YPL067C	__________	+1.22	166325	203055	unknown	unknown
YBR139W	__________	+1.83	244004	446513	unknown	unknown; similar to serine-type carboxypeptidases
YCR076C	__________	+1.27	217434	276125	unknown	unknown
YDR011W	SNQ2______	-1.29	864927	672206	4-nitroquinoline-N-oxide resistance	putative ATP-dependent permease
YDR376W	ARH1______	+1.01	281985	285718	unknown	unknown; similar to human adrenodoxin reductase
YER073W	ALD5______	-1.10	537505	488392	fermentation	mitochondrial aldehyde dehydrogenase
YGL069C	__________	-1.08	546282	505502	unknown	unknown
YGR176W	__________	-1.32	383641	290936	unknown	unknown
YHR193C	EGD2______	-1.05	8376525	7960180	protein synthesis (putative)	homolog of human nascent-polypeptide-associated complex subunit
YJL070C	__________	-1.04	227066	217870	unknown	unknown; similar to rat AMP deaminase 1
YKL067W	YNK1______	+1.49	946759	1407601	nucleotide metabolism	nucleoside diphosphate kinase
YLR002C	__________	-1.50	920396	615093	unknown	unknown
YLR374C	__________	-1.12	132392	118446	unknown	unknown
YMR109W	MYO5______	+1.04	169157	176083	cytoskeleton	myosin, class I
YNL161W	CBK1______	-1.02	439094	429139	cell wall biosynthesis (putative)	protein kinase
YOL067C	RTG1______	-1.24	159829	129318	organelle communication	h-l-h transcription factor
YOR279C	__________	+1.02	273697	278885	unknown	unknown
YPL257W	__________	+1.02	151807	154134	unknown	unknown
YBL079W	NUP170____	-1.33	466234	350291	nuclear protein targeting	nuclear pore protein
YDL081C	RPP1A_____	-1.08	12273013	11321341	protein synthesis	ribosomal protein P1A, acidic
YDR208W	MSS4______	-1.13	359963	319335	actin organization	Phosphatidylinositol 4-Phosphate Kinase
YFR004W	RPN11_____	+1.01	789022	799297	transcription	putative global regulator
YGR009C	SEC9______	+1.22	413081	503840	secretion	plasma membrane t-SNARE
YHR022C	__________	-1.20	210467	174940	unknown	unknown; similar to N-terminal region of ras-related
YIL170W	HXT12_____	-1.14	221783	194819	transport	hexose permease
YJR048W	CYC1______	-2.54	2381909	936355	oxidative phosphorylation	cytochrome-c isoform 1
YKR045C	__________	-1.20	882622	737699	unknown	unknown
YLR202C	__________	+1.08	172961	186645	unknown	unknown
YML072C	__________	+1.05	1694452	1780805	unknown	unknown
YMR304W	UBP15_____	+1.06	208135	221023	protein degradation, ubiquitin-mediated	putative deubiquitinating enzyme
YNR024W	__________	-1.16	356014	306030	unknown	unknown
YOR103C	OST2______	+1.20	788764	943775	protein glycosylation	oligosaccharyltransferase complex subunit
YPL079W	RPL21B____	-1.18	15309293	13019677	protein synthesis	ribosomal protein L21B
YPR170C	__________	+1.08	723657	781035	unknown	unknown
YBR151W	APD1______	+1.20	94552	113588	cytoskeleton (putative)	unknown
YCR088W	ABP1______	+1.75	583646	1023002	cytoskeleton	actin binding protein
YDR023W	SES1______	-1.19	1787077	1496556	protein synthesis	tRNA synthetase, seryl
YDR388W	RVS167____	+1.46	463998	677374	cytoskeleton	actin-binding protein
YER085C	__________	-1.06	132781	125290	unknown	unknown
YGL081W	__________	-1.10	130331	118600	unknown	unknown
YGR188C	BUB1______	-1.08	266797	246952	cell cycle, checkpoint	protein kinase
YHR205W	SCH9______	+1.07	299384	319504	signaling	protein kinase
YJL082W	IML2______	+1.27	139873	177111	plasmid maintenance (putative)	unknown
YKL079W	SMY1______	+1.23	173473	213693	cytoskeleton	kinesin-related protein
YLR014C	PPR1______	-1.17	181849	155661	pyrimidine biosynthesis	transcription factor
YLR386W	__________	+1.14	161837	184475	unknown	unknown
YNL173C	MDG1______	-1.04	185669	178359	signaling, pheromone pathway	unknown
YOL079W	__________	-1.24	166771	134246	unknown	unknown; similar to NADH dehydrogenase chain 4-honeybee
YOR291W	__________	-1.07	657904	617099	unknown	unknown; similar to cation translocating ATPases
YPL267W	__________	-1.08	228511	212567	unknown	unknown
YBL091C	MAP2______	+1.01	573000	580787	protein processing	methionine aminopeptidase 2
YDL093W	PMT5______	-1.13	293267	258590	protein glycosylation	dolichyl phosphate-D-mannose:protein O-D-mannosyltransferase
YDR216W	ADR1______	-1.13	288186	254632	transcription	ADH2 and peroxisomal protein transcription factor
YFR016C	__________	+1.13	482696	547126	unknown	unknown; similar to Uso1p and to rat neurofilament
YGR021W	__________	+1.04	296708	309066	unknown	unknown
YHR034C	__________	-1.27	412793	325198	unknown	unknown
YIR004W	DJP1______	-1.01	424063	421023	peroxisome biogenesis	unknown
YJR060W	CBF1______	-1.07	192091	180116	mitosis	kinetochore protein
YKR057W	RPS21A____	-1.34	12917130	9657213	protein synthesis	ribosomal protein S21A
YLR214W	FRE1______	-2.15	1228881	570742	iron homeostasis	ferric (and cupric) reductase
YML084W	__________	-1.08	124558	115475	unknown	unknown
YMR314W	PRE5______	+1.31	1299503	1696665	protein degradation	20S proteasome subunit(alpha6)
YNR036C	__________	+1.21	769023	927840	unknown	unknown; similar to ribosomal protein S12
YOR115C	TRS33_____	+1.08	580716	624928	secretion (putative)	transport protein particle (TRAPP) subunit, 33 kD
YPL091W	GLR1______	-1.00	1077242	1072765	glutathione metabolism	glutathione reductase
YPR182W	SMX3______	-1.03	379480	368111	mRNA splicing	core snRNP protein
YBR162W	YSY6______	+1.00	1385780	1388787	secretion (putative)	unknown
YCR099C	__________	-1.12	137292	122502	unknown	unknown; similar to Pep1p, probably represents a fragmented coding region of a pseudogene
YDR400W	URH1______	-1.14	211425	185316	pyrimidine metabolism	uridine nucleosidase
YER095W	RAD51_____	+1.24	249588	309474	DNA repair and recombination	recombinase
YGL093W	SPC105____	+1.02	234411	240074	cytoskeleton	spindle pole body component
YGR200C	ELP2______	-1.38	521680	378156	transcription	RNA polymerase II subunit (elongator)
YJL094C	__________	+1.17	150658	175846	unknown	unknown; similar to Enterococcus hirae Na+/H+-antiporter
YKL091C	__________	+1.36	206005	279221	unknown	unknown; similar to Sec14p
YLR026C	SED5______	+1.10	383249	420351	secretion	ER-to-Golgi t-SNARE
YLR398C	SKI2______	-1.08	153467	141503	mRNA decay and virus resistance	putative helicase
YMR132C	__________	-1.10	196256	179025	unknown	unknown
YNL185C	MRPL19____	+1.09	400829	438103	protein synthesis	ribosomal protein, mitochondrial L19
YOL091W	SPO21_____	+1.08	150179	162357	sporulation	unknown
YOR302W	__________	-1.04	117372	113126	unknown	unknown
YPL279C	__________	-1.17	517854	444354	unknown	unknown
YAL011W	__________	-1.14	204446	179121	unknown	unknown
YBR175W	__________	-1.06	259408	245220	unknown	unknown
YCRX05W	__________	-1.40	153576	109333
YDR046C	BAP3______	+1.26	276371	349291	transport	branched-chain amino acid permease
YDR413C	__________	-1.38	486217	352153	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YER108C	FLO8______	-1.01	216768	214319
YGL106W	MLC1______	-1.18	841596	715797	cytoskeleton	myosin light chain
YGR213C	RTA1______	+1.34	120947	162457	7-aminocholesterol resistance	unknown
YIL010W	DOT5______	+1.46	327181	477362	transcription	derepressor of telomeric silencing
YJL107C	__________	+1.04	117723	121858	unknown	unknown
YKL103C	LAP4______	+1.22	173557	210945	protein degradation	vacuolar aminopeptidase ysc1
YLR037C	__________	+1.39	157784	219211	unknown	unknown; similar to Pau3p and other members of the PAU1
YMR144W	__________	+1.08	214884	232689	unknown	unknown
YNL198C	__________	-1.12	106570	95260	unknown	unknown
YOR314W	__________	-1.05	110301	104735	unknown	unknown
YPR009W	__________	-1.13	367373	323972	unknown	unknown
YBL102W	SFT2______	+1.02	376416	385722	unknown	suppresses sed5 ts mutants
YCL009C	ILV6______	-1.01	583891	580817	isoleucine and valine biosynthesis	acetolactate synthase
YDL106C	GRF10_____	-1.06	167493	158318	phosphate signaling	transcription factor
YDR229W	__________	+1.03	126541	129911	unknown	unknown
YEL010W	__________	-1.00	95558	95118	unknown	unknown
YFR029W	PTR3______	+1.16	159180	185430	transport	peptide permease regulator
YGR032W	GSC2______	+2.23	163630	364197	cell wall biogenesis	1,3-beta-D-glucan synthase subunit
YHR046C	__________	-1.09	355252	325595	unknown	unknown; similar to inositol monophosphatase of E. coli,
YIR017C	MET28_____	+1.32	131672	173516	sulfur amino acid metbolism	transcriptional activator
YJR073C	OPI3______	+2.24	297904	666902	phospholipid metabolism	methylene-fatty-acyl-phospholipid synthase
YKR070W	__________	+1.28	369041	472381	unknown	unknown
YLR227C	__________	+1.12	220153	246438	unknown	unknown
YML096W	__________	-1.22	421492	345966	unknown	unknown
YNL010W	__________	-1.07	2420379	2257957	unknown	unknown
YNR049C	MSO1______	+1.06	467585	496582	secretion	unknown; interacts with Sec1p
YOR128C	ADE2______	-1.24	801702	647896	purine biosynthesis	phosphoribosylaminoimidazole carboxylase
YPL104W	MSD1______	-1.14	198784	174495	protein synthesis	tRNA synthetase, mitochondrial, aspartyl
YPR195C	__________	-1.03	129142	125879	unknown	unknown
YAL023C	PMT2______	+1.09	575953	627371	protein glycosylation	dolichyl phosphate-D-mannose:protein O-D-mannosyltransferase
YBR187W	__________	-1.52	484233	318815	unknown	unknown; similar to ND5 and PSB2 (SP:P03920 and SP:P20898)
YCRX17W	__________	+1.70	591955	1008154
YDR058C	TGL2______	+1.22	137804	168531	fatty acid metabolism	triacylglycerol lipase
YDR425W	__________	+1.13	163708	184200	unknown	unknown
YGL118C	__________	+1.08	87581	94560	unknown	unknown; similar to Autographa californica late expression
YGR225W	AMA1______	+1.12	86019	96755	sporulation	activator of meiotic anaphase promoting complex
YIL021W	RPB3______	-1.04	753403	727428	transcription	RNA polymerase II 45 kDa subuni
YJL119C	__________	+1.01	138985	141026	unknown	unknown
YKL115C	__________	-1.01	112125	111391	unknown	unknown
YLR049C	__________	+1.05	322896	338591	unknown	unknown
YLR421C	RPN13_____	+1.12	1008530	1131237	protein degradation (putative)	26S proteasome subunit (putative)
YMR155W	__________	-1.01	217899	215404	unknown	unknown; similar to E. coli ribosomal protein S8
YNL210W	MER1______	+1.06	127144	134456	meiosis, MER2 mRNA splicing	RNA binding protein
YOL114C	__________	-1.03	132261	127956	unknown	unknown; similar to human DS-1 protein
YOR326W	MYO2______	-1.01	130297	129538	cytoskeleton	myosin, class V
YPR021C	__________	-1.00	268346	267930	unknown	unknown; similar to proteins of the mitochondrial carrier family
YBR001C	NTH2______	-1.09	203651	187035	trehalose metabolism	alpha,alpha-trehalase
YCL022C	__________	-1.76	306235	174064	unknown	unknown
YDL118W	__________	-1.42	194424	137339	unknown	unknown
YEL021W	URA3______	+1.15	15842660	18181812	pyrimidine biosynthesis	orotidine-5'-phosphate decarboxylase
YFR038W	__________	-2.05	675922	330331	unknown	unknown
YGR039W	__________	-1.42	194295	136645	unknown	unknown; similar to Sauroleishmania tar protein 1
YIR026C	YVH1______	-1.68	563517	335388	sporulation	protein phosphatase
YJR086W	STE18_____	+1.08	548204	591570	signaling, pheromone pathway	gamma subunit of G protein
YKR082W	NUP133____	-1.15	529454	461605	nuclear protein targeting	nuclear pore protein
YLR237W	THI7______	-1.02	192649	188967	transport	thiamine transporter
YML106W	URA5______	-1.33	3474903	2618805	pyrimidine biosynthesis	orotate phosphoribosyltransferase
YNL022C	__________	-1.34	461586	344677	unknown	unknown
YNR061C	__________	-1.28	841449	657975	unknown	unknown
YOR140W	SFL1______	-1.13	226450	200811	cell surface assembly	transcription factor
YPL116W	HOS3______	-1.07	205481	191735	unknown	unknown; similar to Hda1p, Rpd3p, Hos2p, and Hos1p
YAL034W	MTW1______	-1.11	224163	202583	unknown	unknown
YBR199W	KTR4______	-1.46	308841	211288	protein glycosylation	putative alpha-1,2-mannosyltransferase
YDR070C	__________	-1.07	156041	145798	unknown	unknown
YDR437W	__________	-1.35	209191	155332	unknown	unknown
YER131W	RPS26B____	-1.06	15468824	14585983	protein synthesis	ribosomal protein S26B
YGL130W	CEG1______	-1.19	224018	188538	mRNA capping	mRNA guanylyltransferase
YGR237C	__________	+1.06	213145	225440	unknown	unknown
YIL033C	SRA1______	+1.38	505476	699195	signaling?	cAMP dependent protein kinase, regulatory subunit
YJL131C	__________	+1.08	235514	254914	unknown	unknown; similar to carbamylphosphate synthetase
YKL127W	PGM1______	-1.17	438269	374219	glycolysis	phosphoglucomutase
YLR061W	RPL22A____	-1.28	8613328	6728851	protein synthesis	ribosomal protein L22A
YLR431C	__________	+1.05	204833	214660	unknown	unknown
YNL222W	SSU72_____	-1.07	147931	137662	transcription	nuclear protein
YOL126C	MDH2______	+1.37	431381	590000	TCA cycle	malate dehydrogenase
YOR338W	__________	+1.26	166259	209080	unknown	unknown
YPR033C	HTS1______	-1.29	1869978	1445210	protein synthesis	tRNA synthetase, histidyl
YBR012W	TY1A______	+1.45	3075992	4446188	unknown	unknown
YCL034W	__________	+1.04	546584	567705	unknown	unknown
YDL130W	RPP1B_____	-1.31	12822783	9824720	protein synthesis	ribosomal protein L44', acidic
YDR253C	MET32_____	-1.21	384558	317630	methionine metabolism	transcription factor
YEL033W	__________	-1.66	5379762	3249840	unknown	unknown
YFR050C	PRE4______	+1.19	1151452	1372943	protein degradation	proteasome subunit, B type
YGR051C	__________	-1.05	241692	229974	unknown	unknown
YHR067W	__________	-1.07	200960	187524	unknown	unknown
YIR038C	GTT1______	+1.37	381078	522839	glutathione metabolism	glutathione transferase
YJR097W	__________	-1.04	217051	209692	unknown	unknown; similar to E. coli DnaJ
YKR094C	RPL40B____	-1.09	14574986	13371260	protein synthesis	ribosomal protein L40B
YLR249W	YEF3______	-1.14	157594	138757	protein synthesis	translation elongation factor eEF3
YML117W	__________	+1.15	165320	189572	unknown	unknown
YNL034W	__________	-1.19	140216	117903	unknown	unknown; similar to Ynl018p
YNR073C	__________	-1.17	155610	132538	unknown	unknown; similar to E. coli D-mannonate oxidoreductase
YOR150W	MRPL23____	+1.20	490206	587115	protein synthesis	ribosomal protein, mitochondrial large subunit
YPL128C	TBF1______	-1.07	319035	299524	telomere length regulation	telomere TTAGGG repeat-binding factor
YAL043C	PTA1______	-1.12	141728	126616	tRNA processing	unknown
YBR211C	AME1______	-1.10	218419	199179	unknown	microtubule associated
YDR082W	STN1______	-1.01	196095	194658	telomere length regulation	asssociates with Cdc13p
YDR449C	__________	-1.28	492465	385922	unknown	unknown
YER141W	COX15_____	-1.07	312408	291465	respiration	cytochrome oxidase assembly factor
YGL142C	GPI10_____	-1.05	160304	153295	phospholipid metabolism	glycosyl phosphatidyl inositol (GPI) synthesis

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YGR249W	MGA1______	-1.01	112398	111132	pseudohyphal growth (putative)	unknown
YIL045W	PIG2______	-1.04	199733	192928	glucose repression	(putative) Glc7p regulatory subunit
YJL143W	TIM17_____	-1.30	965791	740973	mitochondrial protein targeting	inner membrane translocase component
YKL139W	CTK1______	+1.12	193823	217573	transcription	protein kinase; phosphorylates RNA pol. II subunit
YLR073C	__________	-1.36	606794	447128	unknown	unknown
YLR443W	ECM7______	+1.18	270715	319045	cell wall biogenesis	unknown
YMR176W	ECM5______	+1.20	358343	431583	cell wall biogenesis	unknown
YNL234W	__________	+1.07	190796	204228	unknown	unknown; similar to mammalian globins
YOL138C	__________	-1.03	318665	308340	unknown	unknown
YOR348C	PUT4______	-1.06	139434	131059	transport	proline and gamma-aminobutyrate permease
YPR045C	__________	+1.11	198001	218967	unknown	unknown; similar to C. elegans protein
YBR023C	CHS3______	+1.20	139690	168131	cell wall biogenesis	chitin synthase III
YCL046W	__________	-1.01	86489	85285	unknown	unknown
YDL140C	RPO21_____	-1.33	660385	497590	transcription	RNA polymerase II 215 kD subunit
YEL045C	__________	-1.10	107672	97979	unknown	unknown
YGR063C	SPT4______	+1.18	507579	598176	transcription	elongation factor
YHR078W	__________	-1.24	214090	173219	unknown	unknown
YJR109C	CPA2______	+1.06	142879	151338	glutamate metabolism	carbamyl phosphate synthetase
YKR106W	__________	-1.10	142429	129068	unknown	major facilitator superfamily
YLR258W	GSY2______	+2.47	153548	378656	glycogen metabolism	glycogen synthase
YML129C	COX14_____	+1.23	324589	400490	respiration	cytochrome-c oxidase assembly protein
YNL044W	YIP3______	+1.36	1171527	1588312	unknown	unknown; interacts with Ypt protein(s)
YOR162C	YRR1______	+1.05	317555	332891	transport	transcriptional activator of SNQ2
YPL140C	MKK2______	-1.04	228649	218938	signaling, PKC1 pathway	MAP kinase (mitogen-activated protein kinase)
YAL056W	__________	+1.06	83774	88385	unknown	unknown
YBR223C	__________	+1.14	95648	108760	unknown	unknown
YDR094W	__________	+1.19	419651	498049	unknown	unknown
YDR461W	MFA1______	+1.05	111465	117178	mating	a-factor precursor
YER151C	UBP3______	+1.02	232081	237608	protein degradation, ubiquitin-mediated	ubiquitin-specific protease
YGL154C	LYS5______	-1.02	248922	243713	lysine biosynthesis	aminoadipate-semialdehyde dehydrogenase subunit
YGR261C	APL6______	-1.09	278749	255369	vacuolar protein targeting	AP-3 complex subunit
YIL057C	__________	-1.09	1236766	1132228	unknown	unknown
YJL155C	FBP26_____	+2.21	169286	374613	fructose metabolism	fructose-2,6-bisphosphatase
YKL151C	__________	+1.51	229526	346230	unknown	unknown
YLR085C	ARP6______	-1.06	183623	173792	cytoskeleton (putative)	actin-related protein
YLR455W	__________	-1.02	221251	217259	unknown	unknown
YMR188C	__________	-1.02	441407	432920	unknown	unknown; similar to 30S ribosomal proteins (S17)
YNL246W	__________	+1.06	530325	559828	unknown	unknown; similar to Drosophila melanogaster SET protein
YOL150C	__________	+1.54	586950	902472	unknown	unknown
YOR360C	PDE2______	+1.40	553876	778076	signaling (putative)	high affinity 3',5'-cAMP phosphodiesterase
YPR057W	BRR1______	+1.10	334517	369640	mRNA splicing	required for snRNP biogenesis
YBR035C	PDX3______	+1.54	491803	759044	sterol uptake (putative)	pyridoxine (pyridoxamine) phosphate oxidase
YCL058C	__________	-1.17	602446	513397	unknown	unknown
YDL152W	__________	-1.19	108266	90783	unknown	unknown
YDR273W	__________	+1.01	144788	146091	unknown	unknown
YEL057C	__________	+1.06	152393	162202	unknown	unknown
YGR075C	PRP38_____	+1.01	375845	377944	mRNA splicing	U4/U6 snRNA dissociation factor
YHR089C	GAR1______	-1.51	2039224	1348669	rRNA processing	snoRNP protein
YJR121W	ATP2______	+1.26	1524902	1925275	ATP synthesis	F1F0-ATPase complex, F1 beta subunit
YLR269C	__________	+1.04	218043	225751	unknown	unknown
YMR008C	PLB1______	+2.08	268999	560305	phospholipid metabolism	phospholipase B
YOR174W	MED4______	+1.05	116185	122295	transcription	RNA polymerase II mediator subunit
YPL152W	RRD2______	+1.08	271863	294746	drug resistance	unknown
YBR235W	__________	-1.09	123937	114083	unknown	unknown; similar to human SLC12A1 gene for which mutations
YDR104C	SPO71_____	-1.01	137552	136710	sporulation	unknown
YDR473C	PRP3______	-1.06	229595	216726	mRNA splicing	U4/U6 snRNP protein
YER161C	SPT2______	-1.06	482713	454983	chromatin structure	HMG-like non-histone protein
YGL166W	CUP2______	+1.36	297267	404505	transcription	copper-dependent transcriptional activator
YGR273C	__________	+1.00	164744	165000	unknown	unknown
YIL068C	SEC6______	-1.13	653890	578599	secretion	exocyst complex subunit
YJL167W	ERG20_____	+1.01	4191400	4230134	sterol metabolism	farnesyl-pyrophosphate synthetase
YKL163W	PIR3______	+2.69	2258919	6071131	unknown	unknown; similar to members of the Pir1p/Hsp150p/Pir3p
YLR097C	__________	+1.22	277691	338517	unknown	unknown
YLR467W	YRF1-5____	+1.42	1626770	2309204	unknown	Y' helicase (subtelomerically-encoded)
YMR199W	CLN1______	+1.16	269043	311969	cell cycle	G1/S cyclin
YNL258C	__________	+1.06	123236	131201	unknown	unknown
YOL162W	__________	+1.07	135699	145288	unknown	unknown
YOR372C	NDD1______	-1.02	671112	655338	mitosis (putative)	unknown
YPR069C	SPE3______	+1.05	114869	120652	polyamine biosynthesis	putrescine aminopropyltransferase (spermidine synthase)
YBR047W	__________	+1.04	95278	99356	unknown	unknown
YCL073C	__________	-1.07	127425	119132	unknown	major facilitator superfamily
YDL164C	CDC9______	-1.13	325077	287505	DNA replication and repair	DNA ligase
YDR285W	ZIP1______	-1.21	141072	116690	meiosis	synaptonemal complex protein
YEL068C	__________	-1.08	196969	182435	unknown	unknown
YGR087C	PDC6______	-1.49	3290656	2209141	glycolysis	pyruvate decarboxylase 3
YHR101C	BIG1______	-1.04	232614	223954	signaling (putative)	suppresses rot1/rot2 synthetic lethality
YJR133W	XPT1______	-1.22	667453	549322	xanthine utilization	xanthine phosphoribosyltransferase
YLR281C	__________	+1.08	111334	120165	unknown	unknown
YMR020W	FMS1______	+1.29	246003	317152	sterol metabolism (putative)	unknown
YNL066W	SUN4______	+1.09	1456065	1587090	aging	unknown
YOR186W	__________	-1.09	137922	126203	unknown	unknown
YPL164C	MLH3______	+1.02	227211	230995	DNA repair; DNA recombination	MutL homolog
YAR020C	PAU7______	+1.06	121647	128895	unknown	unknown; similar to Pau3p/Ycr104p, PAU1 family
YBR247C	ENP1______	-1.77	754431	426229	protein glycosylation	putative oligosaccharyltransferase complex subunit
YDR116C	__________	+1.04	260299	271035	unknown	unknown; similar to prokaryotic ribosomal protein L1
YDR485C	__________	-1.04	150622	144396	unknown	unknown; similar to human YL-1 protein, GB:D43642
YER172C	BRR2______	-1.26	237217	188321	mRNA splicing	RNA helicase
YGL178W	MPT5______	+1.12	117372	131324	unknown	unknown
YGR285C	ZUO1______	-1.05	5628955	5381391	unknown	binds Z-DNA
YIL078W	THS1______	-1.04	2101605	2012150	protein synthesis	tRNA synthetase, threonyl
YJL179W	PFD1______	-1.03	548481	533189	protein folding	prefoldin subunit 1
YKL175W	__________	+1.01	554016	560213	unknown	unknown
YLR109W	AHP1______	+1.47	7717478	11376684	oxidative stress response	alkyl hydroperoxide reductase
YMR211W	__________	-1.04	258129	247537	unknown	unknown; similar to beta-tubulins
YNL270C	ALP1______	-1.04	155487	150142	transport	basic amino acid permease
YOR008C	SLG1______	+1.02	136488	139211	signaling, stress response and cell wall integrity	unknown
YOR384W	FRE5______	-1.15	148186	129336	unknown	unknown; similar to Fre2p
YPR081C	__________	+1.07	227310	242281	unknown	unknown; similar to glycyl-tRNA synthetases
YBR059C	AKL1______	+1.11	253302	279926	unknown	protein kinase
YCLX09W	__________	-1.01	107165	105591

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YDL176W	__________	+1.04	207474	216215	unknown	unknown
YDR297W	SUR2______	+1.28	631593	807553	sphingolipid metabolism	hydroxylase
YER002W	__________	+1.10	99688	109225	unknown	unknown
YGR099W	TEL2______	-1.02	222547	218366	telomere length regulation	telomere binding protein
YHR113W	__________	-1.02	756247	743299	unknown	unknown; similar to vacuolar aminopeptidase Lap4p/Ape1p
YJR145C	RPS4A_____	+1.24	14017090	17315239	protein synthesis	ribosomal protein S4A
YLR292C	SEC72_____	-1.01	945251	939605	secretion	ER protein translocation subcomplex subunit
YNL078W	__________	-1.02	343048	335013	unknown	unknown
YOR196C	LIP5______	-1.00	712698	711770	fatty acid metabolism	lipoic acid synthase
YPL176C	__________	+1.04	157607	163726	unknown	unknown; similar to Ssp134p
YAR043C	__________	-1.05	98675	94077
YBR259W	__________	+1.13	122691	138416	unknown	unknown; similar to serine-type carboxypeptidase Prc1p
YDR128W	__________	-1.05	167052	158377	unknown	unknown
YDR497C	ITR1______	+1.21	1110912	1343409	transport	inositol permease
YER183C	__________	+1.11	115099	127745	unknown	unknown
YGL190C	CDC55_____	+1.14	243108	277753	cell cycle	protein phosphatase
YIL089W	__________	+1.16	156020	181261	unknown	unknown
YJL191W	RPS14B____	-1.19	4254102	3567859	protein synthesis	ribosomal protein S14B
YKL187C	__________	-1.11	153058	138380	unknown	unknown; similar to 4-mycarosyl isovaleryl-CoA transferase
YLR121C	YPS3______	+3.76	250449	941063	protein processing	GPI-anchored aspartic protease
YMR223W	UBP8______	-1.14	228193	199632	protein degradation, ubiquitin-mediated	putative deubiquitinating enzyme
YNL282W	POP3______	-1.26	171800	136448	rRNA and tRNA processing	RNase P and RNase MRP subunit
YOR020C	HSP10_____	+1.37	1614605	2213419	protein folding	mitochondrial chaperonin
YPR093C	__________	-1.21	269243	222443	unknown	unknown
YBR071W	__________	+2.35	300620	705823	unknown	unknown; similar to Herpesvirus saimiri EERF2
YCR009C	RVS161____	+1.21	91712	110781	cytoskeleton	actin-binding protein
YDL188C	PPH22_____	+1.13	959810	1082376	cell cycle	protein phosphatase 2A
YDR309C	GIC2______	+1.23	234595	289404	bud emergence	binds Cdc42p
YER012W	PRE1______	+1.20	985859	1186925	protein degradation	20S proteasome subunit C11(beta4)
YHR125W	__________	-1.01	115296	114005	unknown	unknown
YJR157W	__________	-1.02	104608	102059	unknown	unknown
YLR304C	ACO1______	+1.94	552072	1071769	TCA cycle	aconitase
YMR043W	MCM1______	+1.12	2674441	2985690	transcription	multifunctional regulator
YNL090W	RHO2______	+1.03	450977	464723	signaling	GTP-binding protein, rho family
YOR208W	PTP2______	+1.24	246809	305250	signaling, high osmolarity pathway	protein tyrosine phosphatase
YPL187W	MF(ALPHA)1	-1.29	14168037	11002971	mating	alpha factor precursor
YBL008W	HIR1______	+1.02	92509	94317	transcription	histone transcription inhibitor
YBR271W	__________	-1.32	317920	240870	unknown	unknown; similar to Clostridium botulinum C1 toxin
YDL010W	__________	+1.42	256444	364668	unknown	unknown; similar to Ybr014p and glutaredoxins
YDR140W	__________	-1.12	378229	338030	unknown	unknown
YDR509W	__________	-1.09	110872	101879	unknown	unknown
YFL008W	SMC1______	-1.10	685096	625327	mitosis, chromosome condensation and segregation	unknown
YGL202W	ARO8______	+1.20	1079163	1297091	aromatic amino acid biosynthesis	aromatic amino acid aminotransferase
YHL008C	__________	+1.03	160039	164777	unknown	unknown; similar to E. coli NirC potential formate
YIL100W	__________	-1.04	114998	110430	unknown	unknown
YJL203W	PRP21_____	-1.04	223257	214392	mRNA splicing	U2 snRNP activation
YKL199C	YKT9______	+1.01	216490	217892	unknown	unknown
YLR133W	CKI1______	+1.01	141785	142567	lipid metabolism	choline kinase
YMR235C	RNA1______	-1.16	1927638	1662325	RNA export	GTPase activating protein for Gsp1p
YNL292W	PUS4______	-1.56	434986	278860	tRNA processing	pseudouridine synthase
YOR032C	HMS1______	-1.04	149188	144013	pseudohyphal growth	similar to myc family of transcription factors
YPL010W	RET3______	-1.02	1625258	1597677	secretion	vesicle coat component
YPR105C	__________	-1.07	516983	484573	unknown	unknown
YBR083W	TEC1______	-1.77	264523	149375	pseudohyphal growth	trancriptional activator
YCR020C	PET18_____	+1.12	138508	155369	mitochondrial DNA maintenance	unknown
YDL200C	MGT1______	+1.18	155191	182971	DNA repair	6-O-methylguanine-DNA methylase
YDR319C	__________	+1.19	196425	233267	unknown	unknown
YER022W	SRB4______	-1.00	219994	219600	transcription	RNA polymerase II mediator subunit
YGL010W	__________	-1.01	146883	145470	unknown	unknown
YGR121C	MEP1______	+1.06	186917	197875	transport	ammonia permease
YHR136C	SPL2______	+1.81	145908	264662	cell cycle	protein kinase inhibitor
YJL010C	__________	-1.96	425835	217122	unknown	unknown
YKL009W	MRT4______	-1.55	1994336	1289328	mRNA decay	unknown
YLL010C	PSR1______	-1.09	341315	313998	salt tolerance (putative)	phosphatase
YLR315W	__________	+1.00	102778	102849	unknown	unknown
YNL102W	POL1______	-1.20	487500	407392	DNA replication	polymerase alpha 180 kD subunit
YOL010W	RCL1______	-1.04	538938	520224	unknown	putative RNA 3'-terminal phosphate cyclase
YOR220W	__________	+1.76	312056	548535	unknown	unknown
YPL199C	__________	-1.11	1162763	1046023	unknown	unknown
YAR069C	__________	-1.02	121280	118986	unknown	unknown
YBL020W	RFT1______	-1.09	242229	222891	cell cycle	unknown
YBR283C	SSH1______	-1.05	1202100	1149857	secretion	ER protein translocation complex subunit
YDL022W	GPD1______	+2.58	560753	1444527	glycerol metabolism	glycerol-3-phosphate dehydrogenas
YDR152W	__________	-1.22	846393	692038	unknown	unknown
YDR521W	__________	-1.01	141261	139462	unknown	unknown
YFL017C	GNA1______	-1.20	494126	410459	UDP-N-acetylglucosamine biosynthesis	glucosamine-phosphate N-acetyltransferase
YGL214W	__________	-1.02	112239	110067	unknown	unknown
YHL018W	__________	+1.06	90431	96111	unknown	unknown; similar to human pterin-4-alpha-carbinolamine
YIL112W	__________	+1.04	225438	233472	unknown	unknown; similar to ankyrin and coiled-coil proteins
YJL215C	__________	+1.05	105285	110452	unknown	unknown
YKL211C	TRP3______	+1.02	428224	438678	tryptophan biosynthesis	anthranilate synthase component II and indole-3-phosphate synthase
YLR145W	__________	-1.01	219327	216469	unknown	unknown
YML019W	OST6______	-1.18	524796	444780	protein glycosylation	putative N-oligosaccharyltransferase complex subunit
YMR246W	FAA4______	-1.98	1439854	726072	fatty acid metabolism	long-chain-fatty-acid--CoA ligase
YNL304W	YPT11_____	-1.03	209165	202705	signaling (putative)	unknown; similar to Ypt1p and many other ras-like GTPases
YOR044W	__________	+1.01	162555	163490	unknown	unknown
YPL022W	RAD1______	-1.06	478101	451491	DNA repair, nucleotide excision	repairosome component
YPR117W	__________	-1.01	117163	116085	unknown	unknown
YBR093C	PHO5______	+1.86	984161	1832468	phosphate metabolism	acid phosphatase, repressible
YCR030C	__________	-1.10	161560	146311	unknown	unknown
YDL212W	SHR3______	-1.19	576786	486153	secretion; protein targeting, plasma membrane	ER membrane protein
YDR331W	GPI8______	+1.11	243851	270916	protein processing	transamidase (putative), GPI anchor attachment
YER034W	__________	+1.08	167262	180508	unknown	unknown
YGL022W	STT3______	-1.06	465378	440658	protein glycosylation	oligosaccharyltransferase complex assembly
YGR133W	PEX4______	-1.01	193316	191020	protein degradation, ubiquitin-mediated	E2 ub.-conjugating enzyme
YHR146W	__________	-1.80	896324	496709	unknown	unknown; similar to pheromone adaptation protein Mdg1p
YJL022W	__________	-1.07	124918	116622	unknown	unknown
YKL021C	MAK11_____	-1.70	627078	369448	dsRNA virus propagation	unknown; essential gene
YLL022C	HIF1______	-1.31	580321	444235	chromatin structure	interacts with histone acetyltransferase
YLR327C	__________	+3.38	116244	392836	unknown	unknown; similar to Stf2p

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YMR064W	AEP1______	+1.02	334126	340132	protein synthesis(putative)	ATP9/OLI1 expression
YNL114C	__________	-1.33	886372	668662	unknown	unknown
YOL022C	__________	-1.51	931769	619104	unknown	unknown
YOR232W	MGE1______	-1.31	1893376	1442218	mitochondrial protein targeting	could change to: protein folding; mitochondrial chaperone (has a targeting phenotype, only b/c misfolded proteins accumulate in the mito., which backs the pathway up)
YPL211W	NIP7______	-2.04	2302288	1127753	rRNA processing	unknown
YBL032W	__________	-1.14	627471	549496	unknown	unknown
YBR295W	PCA1______	+1.16	116461	135194	transport	Cu(2+) ATPase
YDL034W	__________	-1.13	110871	98069	unknown	unknown
YDR164C	SEC1______	-1.11	230168	207427	secretion	SNARE docking complex subunit (putative0
YDR533C	__________	+1.38	206105	284759	unknown	unknown
YFL027C	__________	-1.07	196790	184333	unknown	unknown
YHL030W	ECM29_____	+1.05	97216	101993	cell wall biogenesis	unknown
YIL124W	AYR1______	+1.59	518087	823581	lipid metabolism	1-Acyl dihydroxyacetone phosphate reductase
YJR003C	__________	-1.37	403916	294133	unknown	unknown; similar to human collagen alpha 3 (VI) chain
YKL223W	__________	+1.05	110575	116043	unknown	unknown
YLR157C	ASP3-2____	+20.62	131659	2714876	asparagine utilization	L-asparaginase II
YMR259C	__________	-1.30	580515	447235	unknown	unknown
YNL316C	PHA2______	-1.07	219373	205299	phenylalanine biosynthesis	prephenate dehydratase
YOR056C	__________	-1.62	896600	551871	unknown	unknown
YPL034W	__________	+1.06	262488	278726	unknown	unknown
YPR129W	SCD6______	-1.12	656960	587251	secretion (putative)	suppressor of clathrin deficiency
YBR105C	VID24_____	+2.59	270737	700150	vacuolar protein targeting	peripheral vesicle membrane protein
YCR042C	TSM1______	-1.07	157831	147358	transcription	TFIID associated factor (TAF)
YDL224C	WHI4______	+1.01	208354	210419	cell size	putative RNA binding protein
YDR343C	HXT6______	+1.36	2051507	2796844	transport	hexose permease
YER044C	__________	-1.47	638826	433941	unknown	unknown
YGL034C	__________	-1.11	117257	105885	unknown	unknown
YGR145W	__________	-1.76	686582	390169	unknown	unknown; similar to MESA gene of Plasmodium falciparum
YHR158C	KEL1______	-1.13	166535	147332	unknown	null mutant has mating defect
YJL034W	KAR2______	-1.00	3159012	3150910	secretion	BiP homolog; ER protein translocation
YKL033W	__________	-1.04	168461	162468	unknown	unknown
YLL034C	__________	-1.39	289273	207601	unknown	unknown; similar to mammalian valosin-containing protein
YLR339C	__________	-1.52	2921774	1920108	unknown	unknown
YNL126W	SPC98_____	-1.01	174904	173072	cytoskeleton	spindle pole body component
YOL034W	__________	+1.06	210601	223969	unknown	unknown
YOR244W	ESA1______	+1.14	290571	330139	chromatin structure	histone acetyltransferase complex subunit
YPL223C	GRE1______	+1.03	163421	167969	unknown	unknown; induced by osmotic stress
YBL044W	__________	-1.02	109880	108038	unknown	unknown
YDL046W	__________	+1.21	388483	468959	unknown	unknown
YDR174W	HMO1______	+1.05	1492312	1567093	chromatin structure	non-histone protein
YDR545W	YRF1-1____	+1.19	953164	1136499	unknown	Y' helicase (subtelomerically-encoded)
YFL037W	TUB2______	+1.01	895175	900260	cytoskeleton	beta-tubulin
YGL237C	HAP2______	-1.34	972470	728038	transcription; respiration	transcription factor, activator of CYC1
YHL041W	__________	-1.18	133397	112974	unknown	unknown
YIL136W	OM45______	+1.80	287371	518678	(putative) mitochondrial organization	outer mitochondrial membrane protein
YJR014W	__________	-1.19	904100	759152	unknown	unknown
YKR010C	TOF2______	-1.11	233532	210501	DNA replication (putative)	interacts with DNA
YLR167W	RPS31_____	+1.28	15849454	20224242	protein synthesis	ribosomal protein S31
YML040W	__________	+1.19	3087017	3667093	unknown	unknown
YMR271C	URA10_____	+1.17	193892	226222	pyrimidine biosynthesis	orotate phosphoribosyltransferase
YNL328C	MDJ2______	-1.08	124773	115212	protein folding	mitochondrial chaperonin
YOR068C	__________	-1.17	150193	128846	unknown	unknown
YPL046C	ELC1______	-1.01	984830	971392	transcription	elongation factor Elongin C
YPR139C	__________	-1.10	488539	445869	unknown	unknown
YBR116C	__________	+1.03	107939	110976	unknown	unknown; similar to sea urchin NADH chain ND2
YCR054C	CTR86_____	-1.14	128744	113329	unknown	unknown
YDL236W	PHO13_____	-1.18	757728	642132	unknown	protein phosphatase and 4-nitrophenylphosphatase
YDR355C	__________	-1.12	107064	95845	unknown	unknown
YER055C	HIS1______	-1.27	2261345	1787258	histidine biosynthesis	ATP phosphoribosyltransferase
YGL046W	__________	-1.21	150624	124589	unknown	unknown
YGR157W	CHO2______	+1.38	351554	483862	phospholipid metabolism	phosphatidylethanolamine N-methyltransferase
YHR170W	NMD3______	-1.57	715964	456537	mRNA decay, nonsense-mediated	Nam7p/Upf1p-interacting protein
YJL047C	RTT101____	-1.08	180127	166951	transposition (putative)	unknown; regulator of Ty1 transposition
YKL044W	__________	-1.15	130104	113043	unknown	unknown
YLL046C	RNP1______	-1.02	102126	99846	unknown	ribonucleoprotein
YLR351C	NIT3______	+1.25	747684	935626	unknown	nitrilase
YNL138W	SRV2______	+1.43	1131563	1615422	signaling	adenylate cyclase-associated protein
YOL046C	__________	-1.11	140902	127198	unknown	unknown
YOR256C	__________	+1.06	243284	258840	unknown	unknown; similar to secretory protein Ssp134p
YPL235W	RVB2______	-1.26	1296173	1025402	unknown	unknown; similar to RUVB
YBL056W	PTC3______	+1.11	646708	717472	osmotic stress response (putative)	protein phosphatase
YDL058W	USO1______	-1.26	580404	462383	secretion	SNARE docking complex assembly
YDR185C	__________	-1.12	165191	147804	unknown	unknown; similar to Msf1p
YFL049W	__________	+1.03	199025	204624	unknown	unknown; similar to Npl6p
YGL249W	ZIP2______	-1.27	174474	137778	meiosis, synapsis	unknown
YIL148W	RPL40A____	+1.07	15810248	16986597	protein synthesis	ribosomal protein L40A
YKR022C	__________	-1.04	462117	442571	unknown	unknown
YLR179C	__________	+1.71	587216	1001858	unknown	unknown; similar to Tfs1p
YML050W	__________	+1.06	193334	204927	unknown	unknown; similar to potato sucrose cleavage protein
YMR283C	RIT1______	-1.14	210478	184074	tRNA processing	initiator methionine tRNA 2'-O-ribosyl phosphate transferase
YNR001C	CIT1______	+2.30	281267	646091	TCA cycle	citrate synthase
YOR080W	DIA2______	+1.09	214045	233170	pseudohyphal growth (putative)	unknown
YPL058C	PDR12_____	-1.14	173258	151336	drug resistance	transporter
YPR151C	__________	-1.08	152204	141153	unknown	unknown
YBR128C	APG14_____	+1.06	140999	149519	autophagy	unknown; interacts with Apg6p/Vps30p
YCR066W	RAD18_____	-1.12	175281	156829	DNA repair, postreplication	forms complex with Rad6p; putative ATPase
YDL248W	COS7______	+1.11	1015598	1124474	unknown	unknown; similar to other subtelomerically-encoded
YER065C	ICL1______	-1.16	166793	143537	glyoxylate cycle	isocitrate lyase
YGL058W	RAD6______	+1.01	593430	599779	protein degradation, ubiquitin-mediated	E2 ub.-conjugating enzyme
YGR165W	__________	+1.01	405358	407437	unknown	unknown
YHR182W	__________	-1.25	261180	208327	unknown	unknown
YJL059W	YHC3______	-1.02	286174	280783	unknown	unknown; similar to human Batten disease-related protein
YKL056C	__________	-1.09	8549004	7864765	unknown	unknown
YLL058W	__________	+1.13	1907018	2149141	unknown	unknown; similar to Neurospora crassa O-succinylhomoserine
YLR363C	NMD4______	-1.01	202193	200310	unknown	Nam7p/Upf1p-interacting protein
YMR098C	__________	+1.06	268885	286347	unknown	unknown
YNL150W	__________	-1.19	1542538	1299923	unknown	unknown
YOL056W	GPM3______	-1.18	453852	386016	glycolysis	phosphoglycerate mutase
YOR268C	__________	-1.09	123354	113032	unknown	unknown
YPL247C	__________	-1.13	151996	134188	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YBL068W	PRS4______	-1.25	328024	263317	pentose phosphate cycle	ribose-phosphate pyrophosphokinase
YDL070W	BDF2______	+1.40	633659	888638	unknown	unknown; similar to mammalian glycogen
YDR197W	CBS2______	-1.10	220609	200431	protein synthesis	translation activator of COB mRNA
YFL061W	__________	-1.27	166723	131770	unknown	unknown; similar to E. coli cyanamide hydratase (urea
YGL261C	__________	+1.19	311077	368655	unknown	unknown; similar to Pau1p and members of the PAU1
YHR012W	VPS29_____	+1.20	499370	598066	vacuolar protein targeting	targets vacuolar receptor, Vps10
YIL159W	BNR1______	-1.03	1036771	1005677	cytoskeleton	actin filament organization
YJR037W	__________	+1.03	120324	123763	unknown	unknown
YKR034W	DAL80_____	-1.03	103460	100792	nitrogen catabolism	transcription factor
YLR191W	PEX13_____	-1.03	290854	282888	peroxisomal protein targeting	docks peroxisomal protein receptor
YML061C	PIF1______	-1.02	148513	145785	DNA repair, mitochondrial	DNA helicase
YMR294W	JNM1______	-1.02	321254	314168	mitosis, nuclear migration	unknown
YNR013C	__________	-1.03	839920	814554	unknown	unknown; major facilitator superfamily
YOR092W	ECM3______	+1.05	268402	281638	cell wall biogenesis	unknown
YPL068C	__________	+1.01	307056	308627	unknown	unknown
YPR159W	KRE6______	-1.07	364324	339478	cell wall biogenesis	glucan synthase subunit
YBR140C	IRA1______	-1.14	159191	139902	signaling, Ras pathway	GTPase-activating protein for Ras1p and Ras2p
YCR077C	PAT1______	-1.33	515481	387652	mitosis; chromosome transmission	topoisomerase II
YDR012W	RPL4B_____	-1.28	9780600	7638588	protein synthesis	ribosomal protein L4B
YDR377W	ATP17_____	+1.68	600272	1010832	ATP synthesis	ATP synthase subunit f
YER074W	RPS24A____	-1.26	10680696	8455965	protein synthesis	ribosomal protein S24A
YGL070C	RPB9______	-1.21	524698	434326	transcription	RNA polymerase II 14.2 subunit
YGR177C	ATF2______	-1.41	263894	186761	acetate ester biosynthesis	alcohol acetyltransferase
YHR194W	__________	+1.03	168888	173142	unknown	unknown
YJL071W	ARG2______	+1.02	161916	165852	arginine biosynthesis	acetylglutamate synthase
YKL068W	NUP100____	-1.10	156285	142678	nuclear protein targeting	nuclear pore protein
YLR003C	__________	-1.53	694224	453316	unknown	unknown
YLR375W	STP3______	+1.36	328608	445326	tRNA splicing	unknown
YMR110C	__________	+1.24	245124	304614	unknown	unknown; similar to aldehyde dehydrogenase
YNL162W	RPL42A____	-1.29	14868100	11505943	protein synthesis	ribosomal protein L42A
YOL068C	HST1______	+1.07	922262	989963	silencing	Sir2p homolog
YOR280C	__________	+1.08	366358	394484	unknown	unknown; similar to S. pombe dihydrofolate reductase
YMR325W	__________	+1.28	269924	344791	unknown	unknown
YBL080C	PET112____	-1.13	140444	123931	protein synthesis	translation of COX2 mRNA (mitochondrial)
YDL082W	RPL13A____	-1.44	11020811	7633406	protein synthesis	ribosomal protein L13A
YDR209C	__________	+1.10	422417	466166	unknown	unknown
YFR005C	SAD1______	-1.17	355364	304518	mRNA splicing, snRNP assembly	unknown
YGR010W	__________	-1.02	230675	225138	unknown	unknown
YHR023W	MYO1______	-1.15	336412	293702	cell wall biosynthesis	myosin heavy chain
YIL171W	HXT12_____	+1.00	160618	160982	transport	hexose permease
YJR049C	UTR1______	+1.08	352104	378767	unknown	putative ferric reductase
YKR046C	__________	-1.05	824428	786354	unknown	unknown
YLR203C	MSS51_____	+1.10	384766	422757	mRNA splicing, COX1 and COB mRNA	unknown
YL16A;_	__________	+1.06	110557	117543
YNR025C	__________	-1.35	653001	482670	unknown	unknown
YOR104W	__________	+1.27	321204	409039	unknown	unknown
YPL080C	__________	+1.06	282469	298593	unknown	unknown
YPR171W	__________	-1.15	233238	203283	unknown	unknown
YBR152W	SPP381____	-1.39	151725	109253	mRNA processing (putative)	U4/U6,U5 snRNP protein
YCR089W	FIG2______	+1.02	110144	112212	mating	extracellular, cell wall protein
YDR024W	__________	-1.28	184408	143933	unknown	unknown
YDR389W	SAC7______	-1.02	203212	199461	signaling	GTPase-activating protein for Rho1p
YER086W	ILV1______	-1.13	397457	350565	isoleucine and valine biosynthesis	threonine deaminase
YGL082W	__________	-1.13	297180	261899	unknown	unknown
YGR189C	CRH1______	+3.98	1047793	4169377	cell wall biogenesis (putative)	unknown; cell wall protein
YHR206W	SKN7______	-1.11	369709	332469	oxidative stress	transcription factor
YJL083W	__________	-1.05	177738	169845	unknown	unknown; similar to Irs4p
YKL080W	VMA5______	-1.02	942559	927626	vacuolar acidification	vacuolar H+-ATPase V1 sector subunit
YLR015W	BRE2______	-1.34	329303	244876	secretion (putative)	unknown; brefeldin A sensitive
YLR387C	__________	+1.06	383059	407141	unknown	unknown
YMR121C	RPL15B____	+1.02	15415328	15659581	protein synthesis	ribosomal protein L15B
YNL174W	__________	-1.88	542313	289193	unknown	unknown
YOL080C	REX4______	-1.31	282474	216056	RNA processing	RNA exonuclease
YOR292C	__________	+1.01	243879	247335	unknown	unknown
YPL268W	PLC1______	+1.17	160499	188401	signaling	phosphoinositide-specific phospholipase C
YBL092W	RPL32_____	-1.09	4546769	4170513	protein synthesis	ribosomal protein L23
YDL094C	__________	+1.03	147266	152124	unknown	unknown
YDR217C	RAD9______	+1.04	99561	103632	DNA repair; DNA damage checkpoint	unknown
YFR017C	__________	+1.51	152351	230508	unknown	unknown
YGR022C	__________	+1.02	105945	107744	unknown	unknown
YHR035W	__________	-1.04	130151	124832	unknown	unknown; similar to Sec23p, expressed under
YIR005W	IST3______	+1.04	186496	193041	salt tolerance (putative)	unknown
YJR061W	__________	+1.30	215309	280195	unknown	unknown
YKR058W	GLG1______	+1.14	182820	207678	glycogen metabolism	glycogen synthesis initiator
YLR215C	CDC123____	-1.05	261361	248271	unknown	unknown
YMR315W	__________	+3.40	479063	1629189	unknown	unknown
YNR037C	__________	+1.47	348798	514165	unknown	unknown; similar to prokaryotic ribosomal protein S19
YOR116C	RPO31_____	-1.22	783912	640542	transcription	RNA polymerase III 160 kD subunit
YPL092W	SSU1______	-1.71	401499	234701	sulfite tolerance	unknown; plasma membrane protein, major facilitator superfamily
YPR183W	DPM1______	+1.11	1269487	1404145	protein glycosylation	dolichol phosphate mannose synthase
YBR163W	DEM1______	+1.03	171530	177509	cell morphology (putative)	unknown; similar to Pta1p
YCR100C	__________	-1.16	114169	98148	unknown	unknown; similar to Pep1p, probably represents a fragmented coding region of a pseudogene
YDR401W	__________	+1.04	95901	100154	unknown	unknown
YER096W	SHC1______	+1.07	97175	103581	sporulation	unknown; may be involved in chitin synthesis
YGL094C	PAN2______	+1.03	118079	121512	mRNA processing	Pab1p-dependent poly(A) ribonuclease subunit
YGR201C	__________	+1.30	237045	308982	unknown	unknown; similar to translation elongation factors
YHR215W	PHO12_____	+1.61	1554741	2497828	phosphate metabolism	secreted acid phosphatase
YJL095W	BCK1______	-1.03	139845	135148	signaling, PKC1 pathway	serine-threonine protein kinase
YKL092C	BUD2______	+1.05	138277	145477	bud site selection	GTPase-activating protein for Rsr1p/Bud1p
YLR027C	AAT2______	+1.15	1051280	1213743	aspartate metabolism	aspartate aminotranferase,
YLR399C	BDF1______	-1.12	439946	391987	meiosis	putative chromatin component
YMR133W	REC114____	+1.08	164574	177028	meiosis, recombination	ds break formation complex subunit
YNL186W	UBP10_____	-1.07	494434	459956	protein degradation, ubiquitin-mediated	ubiquitin C-terminal hydrolase
YOL092W	__________	-1.34	977186	730311	unknown	unknown
YOR303W	CPA1______	+1.22	948594	1156215	arginine biosynthesis	carbamoyl phosphate synthetase, arginine specific
YPL280W	__________	+1.02	116118	118631	unknown	unknown
YAL012W	CYS3______	+1.10	952452	1051707	methionine biosynthesis	cystathionine gamma-lyase
YBR176W	ECM31_____	-1.01	200618	197902	cell wall biogenesis	unknown
YCRX06W	__________	-1.14	110835	96916
YDR047W	HEM12_____	+1.11	625620	695039	heme biosynthesis	uroporphyrinogen decarboxylase

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YDR414C	ERD1______	+1.03	233718	241122	secretion	ER protein retention
YER109C	FLO8______	+1.04	119708	125085	flocculation (and PHD)	FLO1 activator
YGL107C	__________	+1.00	111891	111992	unknown	unknown
YGR214W	RPS0A_____	-1.40	10958765	7802183	protein synthesis	ribosomal protein S0A
YIL011W	__________	-1.36	269758	197901	unknown	unknown; similar to Yil176p, Yir041p and other members of
YJL108C	__________	+1.24	227716	282788	unknown	unknown
YKL104C	GFA1______	+2.23	511914	1142972	cell wall biogenesis	chitin biosynthesis
YLR038C	COX12_____	-1.12	528531	472112	oxidative phosphorylation	cytochrome-c oxidase, subunit VIb
YMR145C	__________	-1.02	1399321	1374286	unknown	unknown; similar to rotenone-insensitive NADH-ubiquinone
YNL199C	GCR2______	-1.09	331483	304951	glycolysis	transcriptional activator
YOR315W	__________	-1.14	313246	275371	unknown	unknown
YPR010C	RPA135____	-1.70	1303644	767163	transcription	RNA polymerase I 135 kD subunit
YBL103C	RTG3______	-1.17	139717	119546	glyoxylate cycle	CIT2 regulator
YCL010C	__________	-1.09	108795	100257	unknown	unknown
YDL107W	MSS2______	+1.18	176294	207616	mRNA splicing, COX1 mRNA	unknown
YDR230W	__________	+1.95	161261	313860	unknown	unknown
YEL011W	GLC3______	+1.25	114361	143396	cell wall biogenesis	glycogen branching enzyme
YFR030W	MET10_____	+1.37	166263	227107	sulfate assimilation	sulfite reductase subunit
YGR033C	__________	-1.03	353647	343194	unknown	unknown
YHR047C	AAP1______	+1.03	188492	194416	protein degradation	arginine/alanine aminopeptidase
YJR074W	MOG1______	+1.48	312827	464144	unknown	unknown; interacts with Gsp1p
YKR071C	__________	-1.41	652239	461336	unknown	unknown
YML097C	VPS9______	-1.19	357186	300525	vacuolar protein targeting	similar to mammalian ras inhibitors
YNL011C	__________	+1.16	185458	215349	unknown	unknown
YNR050C	LYS9______	+1.44	1762257	2532505	lysine biosynthesis	saccharopine dehydrogenase
YOR129C	__________	-1.17	248556	212957	unknown	unknown
YPL105C	__________	-1.10	576522	525677	unknown	unknown; similar to Smy2p
YPR196W	__________	+1.07	232871	248156	unknown	regulates MAL genes (YPD)
YAL024C	LTE1______	+1.03	124323	127777	cell cycle	GDP/GTP exchange factor
YBR188C	NTC20_____	+1.11	212753	236956	mRNA splicing	Prp19p-associated complex protein
YCRX18C	__________	-1.10	137329	124911
YDR059C	UBC5______	+1.74	149378	260160	protein degradation, ubiquitin-mediated	E2 ub.-conjugating enzyme
YDR426C	__________	+1.28	140893	180208	unknown	unknown
YER120W	SCS2______	+1.11	1256326	1390351	inositol metabolism	regulator of INO1 expression
YGL119W	ABC1______	+1.02	164994	167829	respiration	ubiquinol-cyt.-c reductase assembly protein
YGR226C	__________	+1.02	110019	112163	unknown	unknown
YIL022W	TIM44_____	-1.19	321695	269701	mitochondrial protein targeting	inner membrane translocase component
YJL120W	__________	-1.13	146579	129297	unknown	unknown
YKL116C	__________	+1.10	121932	134659	unknown	putative protein kinase
YLR050C	__________	-1.07	323117	302155	unknown	unknown; similar to C-terminal region of human MAC30
YLR422W	__________	-1.08	325417	302527	unknown	unknown
YMR156C	__________	+1.09	174503	190380	unknown	unknown
YNL211C	__________	-1.15	182934	159207	unknown	unknown
YOL115W	TRF4______	-1.22	247095	202906	mitosis, chromosome condensation	unknown
YOR327C	SNC2______	+1.16	998416	1157755	secretion	post-Golgi v-SNARE
YPR022C	__________	+1.09	989206	1081218	unknown	unknown
YBR002C	RER2______	-1.24	506926	407714	protein glycosylation	cis-prenytransferase
YCL023C	__________	-1.08	101626	94136	unknown	unknown
YDL119C	__________	-1.18	538644	456438	unknown	unknown
YEL022W	GEA2______	-1.09	508164	467659	secretion	GDP/GTP exchange factor for ARF
YFR039C	__________	+1.07	166916	179224	unknown	unknown
YGR040W	KSS1______	-1.28	134770	105676	pheromone signal transduction	protein kinase
YHR057C	CYP2______	+1.11	583018	646716	protein folding	peptidyl-prolyl cis-trans isomerase
YIR027C	DAL1______	+1.00	129488	129573	allantoin utilization	allantoinase
YJR087W	__________	+1.02	561565	571651	unknown	unknown
YKR083C	__________	-1.02	248874	244063	unknown	unknown; similar to paramyosin
YLR238W	__________	-1.07	199107	185805	unknown	unknown
YML107C	__________	-1.07	277647	258376	unknown	unknown
YNL023C	FAP1______	-1.61	397144	245958	transcription (putative)	FKBP12-binding protein
YNR062C	__________	-1.20	144776	120439	unknown	unknown; similar to Haemophilus influenzae L-lactate
YOR141C	ARP8______	-1.07	154297	143871	cytoskeleton (putative)	actin-related protein
YPL117C	IDI1______	-1.45	1413880	972560	isoprenoid biosynthesis	isopentenyl-diphosphate delta-isomerase
YAL034C	FUN19_____	+1.08	151092	162768	unknown	unknown
YBR200W	BEM1______	-1.27	287396	226184	bud emergence	binds Cdc24p
YDR071C	__________	+1.13	1279453	1447928	unknown	unknown
YDR438W	__________	+1.05	181347	190594	unknown	unknown
YER132C	PMD1______	-1.06	463630	438005	meiosis	gene expression regulator (putative)
YGL131C	__________	-1.39	1505856	1079526	unknown	unknown
YGR238C	KEL2______	-1.02	164072	161072	unknown	unknown; similar to Kel1p and Kel3p
YIL034C	CAP2______	+1.32	577437	759528	cytoskeleton	F-actin capping protein subunit
YJL132W	__________	-1.05	175756	167128	unknown	unknown; similar to phospholipase D
YKL128C	PMU1______	-1.13	513161	453800	unknown	phosphomutase homolog; suppresses ts tps2 mutant
YLR062C	__________	-1.31	5806351	4437833	unknown	unknown
YLR432W	IMD3______	-1.42	2818708	1990266	unknown	unknown; similar to Pur5p and inosine-5'-monophosphate dehydrogenase of human and E. coli
YMR167W	MLH1______	-1.05	233677	222648	DNA repair	MutL homolog; mismatch repair
YNL223W	AUT2______	-1.16	220768	189688	autophagy	microtubule-associated protein (putative)
YOL127W	RPL25_____	-1.42	15184260	10690956	protein synthesis	ribosomal protein L25
YOR339C	UBC11_____	-1.11	229281	206208	protein degradation, ubiquitin-mediated (putative)	homolog of ubiquitin carrier protein E2-C
YPR034W	ARP7______	-1.10	489427	444968	cytoskeleton (putative)	actin-related protein
YBR012W	TY1B______	-1.49	15958128	10745330	unknown	unknown
YCL035C	GRX1______	+1.14	801527	911162	oxidative stress response	glutaredoxin
YDR254W	CHL4______	-1.21	423066	348869	mitosis, chromosome segregation	unknown
YEL034W	HYP2______	-1.75	9390412	5380273	protein synthesis	translation initiation factor eIF5A
YFR051C	RET2______	-1.19	1375506	1152010	secretion	vesicle coat component
YGR052W	__________	-1.23	190580	155243	unknown	unknown
YHR068W	DYS1______	-1.92	1030877	536776	hypusine biosynthesis	deoxyhypusine synthase
YIR039C	YPS6______	+1.43	151588	217481	protein degradation	GPI-anchored aspartic protease
YJR098C	__________	-1.06	161536	152741	unknown	unknown
YKR095W	MLP1______	-1.07	108200	101508	DNA repair (putative)	myosin-like protein
YLR250W	SSP120____	+1.39	672043	933002	secretion	unknown
YML118W	__________	+1.09	138938	151287	unknown	unknown
YNL035C	__________	-1.31	428721	327646	unknown	unknown
YNR074C	__________	-1.22	228950	188096	unknown	unknown; similar to Bacillus subtilis nitrite reductase
YOR151C	RPB2______	-1.11	818543	740440	transcription	RNA polymerase II 140 kDa subunit
YPL129W	ANC1______	-1.07	1296447	1214401	transcription	TFIIF 30 kD subunit
YAL044C	GCV3______	+1.39	1386680	1931429	glycine metabolism	glycine decarboxylase
YBR212W	NGR1______	-1.02	383613	374498	unknown	glucose-repressible RNA-binding protein
YDR083W	__________	-1.90	962115	506670	unknown	unknown
YDR450W	RPS18A____	-1.41	13148240	9335522	protein synthesis	ribosomal protein S18A
YER142C	MAG1______	-1.13	312098	277185	DNA repair	3-methyladenine DNA glycosylase

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YGL143C	MRF1______	-1.11	233584	211218	protein synthesis	mitochondrial peptide chain release factor
YGR250C	__________	+1.46	256616	374637	unknown	unknown
YIL046W	MET30_____	+1.07	248324	265265	sulfur amino acid metbolism	F-box transcription factor
YJL144W	__________	+1.07	173442	186186	unknown	unknown
YKL140W	TGL1______	-1.05	181273	172489	glycerolipid metabolism	triglyceride lipase-cholesterol esterase
YLR074C	__________	-1.45	670068	462151	unknown	unknown
YLR444C	__________	-1.01	348853	347107	unknown	unknown
YMR177W	MMT1______	+1.06	233644	248184	mitochondrial iron transport	transmembrane domain (4) protein
YNL235C	__________	+1.13	364192	410042	unknown	unknown
YOL139C	CDC33_____	-1.25	3436473	2748276	protein synthesis	translation initiation factor eIF4E
YOR349W	CIN1______	-1.11	153108	138129	mitosis, chromosome segregation	unknown
YPR046W	MCM16_____	-1.02	268868	263632	mitosis,chromosome segregation	unknown
YBR024W	SCO2______	+1.08	86055	92803	respiration	Cox1p and Cox2p stability (putative)
YCL047C	__________	+1.21	243399	295535	unknown	unknown
YDL141W	BPL1______	-1.19	229865	193283	protein processing	biotin:apoprotein ligase
YDR262W	__________	-1.04	356573	342575	unknown	unknown
YEL046C	GLY1______	-1.23	366311	298334	glycine, serine, and threonine metabolism	L-threonine aldolase
YGR064W	__________	+1.07	413555	443666	unknown	unknown
YHR079C	IRE1______	-1.06	110479	104104	protein folding	sensor of unfolded proteins in the ER
YJR110W	__________	+1.14	162117	184994	unknown	unknown
YLR259C	HSP60_____	+1.65	788684	1298105	protein folding	mitochondrial chaperonin
YML130C	ERO1______	+1.15	461831	532949	protein folding	protein disulfide bond formation in the ER
YNL045W	__________	+1.09	328686	356898	unknown	unknown; similar to leukotriene A4 hydrolases and zinc-containing aminopeptidases
YOR163W	DDP1______	+1.31	938808	1226509	dinucleoside polyphosphate metabolism	diadenosine and diphosphoinositol polyphosphate phosphohydrolase
YPL141C	__________	-1.18	373003	316317	unknown	unknown; similar to Kin4p
YAL058W	CNE1______	-1.06	231780	219118	secretion	calnexin and calreticulin homolog
YBR224W	__________	+1.11	79875	88570	unknown	unknown
YDR095C	__________	+1.01	140020	141725	unknown	unknown
YDR462W	MRPL28____	-1.01	226698	225039	protein synthesis	ribosomal protein, mitochondrial L28
YER152C	__________	+1.25	326079	407938	unknown	unknown
YGL155W	CDC43_____	+1.18	260041	306470	protein processing	geranylgeranyltransferase subunit
YGR262C	__________	-1.16	498745	429983	unknown	unknown; similar to apple tree calcium/calmodulin-binding
YIL058W	__________	+1.13	196211	220918	unknown	unknown
YJL156C	SSY5______	-1.13	184950	164140	transport, amino acid (putative)	unknown
YKL152C	GPM1______	+1.31	15156429	19800709	glycolysis	phosphoglycerate mutase
YLR086W	SMC4______	-1.14	270651	237927	mitosis, chromosome condensation and segregation	unknown
YLR456W	__________	-1.02	205465	201658	unknown	unknown
YMR189W	GCV2______	-1.01	143828	142306	amino acid metabolism	glycine decarboxylase P subunit
YNL247W	__________	-1.49	1771968	1187250	protein synthesis	tRNA synthetase, cysteinyl
YOL151W	GRE2______	+1.26	654487	823510	unknown	unknown; induced by osmotic stress
YOR361C	PRT1______	-1.31	1150976	875853	protein synthesis	translation initiation factor eIF3 subunit
YPR058W	YMC1______	-1.24	585936	471468	transport	(putative) mitochondrial carrier
YBR036C	CSG2______	+1.21	757281	913474	sphingolipid metabolism	mannosylation
YCL059C	KRR1______	-1.89	1141534	603067	unknown	essential
YDL153C	SAS10_____	-2.01	872424	433010	silencing	nuclear protein, reulator of silencing at HML, HMR, telomeres
YDR274C	__________	-1.18	160241	136215	unknown	unknown
YEL058W	PCM1______	+2.05	437626	895303	aminosugars metabolism	phosphoacetylglucosamine mutase
YGR076C	MRPL25____	-1.07	221228	206748	protein synthesis	ribosomal protein, mitochondrial L25
YHR090C	YNG2______	+1.03	231948	239565	chromatin structure	histone acetyltransferase complex subunit
YJR122W	CAF17_____	+1.04	256099	265399	catabolite repression	component of CCR4 transcriptional complex
YLR270W	__________	+1.59	324479	517018	unknown	unknown
YMR009W	__________	-1.32	571554	433467	unknown	unknown; similar to MMSAB operon regulatory protein
YNL055C	POR1______	+1.94	2461981	4778755	transport	mitochondrial outer membrane porin
YOR175C	__________	+1.01	453952	456539	unknown	unknown
YPL153C	RAD53_____	+1.12	125757	141368	cell cycle, checkpoint	protein kinase
YAR002C	ERP1______	-1.05	97264	92866	membrane trafficking; secretion (putative)	unknown
YBR236C	ABD1______	-1.13	326012	288182	mRNA capping	mRNA cap methyltransferase
YDR105C	__________	-1.06	344182	324753	unknown	unknown
YDR474C	__________	+1.06	181675	193470	unknown	unknown
YER162C	RAD4______	-1.07	189911	177180	DNA repair, nucleotide excision	repairosome component
YGL167C	PMR1______	+1.07	219205	234486	transport	Ca(2+) ATPase
YGR274C	TAF145____	-1.10	185429	168441	transcription	TFIID 145 kD subunit
YJL168C	SET2______	-1.34	414979	308961	galactose regulation	transcriptional repressor of Gal4
YKL164C	PIR1______	+2.29	3946569	9051726	unknown	unknown; Pir1p/Hsp150p/Pir3p family
YLR098C	CHA4______	+1.13	111728	126236	ser/thr metabolism	CHA1 activator
YMR200W	ROT1______	+1.57	351213	551875	cytoskeleton	unknown
YNL259C	ATX1______	+1.41	299779	423419	oxidative stress response	unknown
YOL163W	__________	-1.18	151680	128340	unknown	unknown; similar to Pseudomonas putida phthalate transporter
YOR373W	NUD1______	+1.07	116109	124763	chromatin structure	nucleosome assembly protein
YPR070W	MED1______	+1.11	110462	122180	transcription	RNA polymerase II mediator subunit
YBR048W	RPS11B____	-1.31	15525334	11809689	protein synthesis	ribosomal protein S11B
YCL074W	__________	-1.22	560684	458889	unknown	unknown
YDL165W	CDC36_____	-1.21	288982	239285	transcription	general negative regulator
YDR286C	__________	-1.40	317761	226210	unknown	unknown
YEL069C	HXT13_____	-2.77	379645	137080	transport	hexose permease
YGR088W	CTT1______	+1.29	131762	169848	oxidative stress response	catalase T
YHR102W	KIC1______	-1.01	164305	162036	mitosis (putative)	protein kinase; interacts with Cdc31p
YJR134C	SGM1______	+1.02	329794	337158	unknown; growth on galactose or mannose	unknown
YLR282C	__________	+1.10	101481	111746	unknown	unknown
YMR021C	MAC1______	-1.08	326834	302503	metal-dependent gene regulation	transcription factor
YNL067W	RPL9B_____	+1.07	15824537	16999243	protein synthesis	ribosomal protein L9B
YOR187W	TUF1______	+1.18	1136729	1346985	protein synthesis	translation elongation factor Tu, mitochondrial
YPL165C	__________	+1.21	219847	266267	unknown	unknown
YAR023C	__________	-1.15	151028	131099	unknown	unknown; similar to subtelomerically-encoded proteins
YBR248C	HIS7______	-1.20	556021	463998	histidine biosynthesis	glutamine amidotransferase:cyclase
YDR117C	__________	-1.39	308566	222092	unknown	unknown
YDR486C	__________	+1.20	377952	453168	unknown	unknown; similar to Snf7p
YGL179C	__________	+1.18	120609	142112	unknown	putative protein kinase
YGR286C	BIO2______	-1.29	330140	255200	biotin biosynthesis	biotin synthetase
YIL079C	__________	-1.16	520194	448303	unknown	unknown; similar to gag polyprotein
YJL180C	ATP12_____	+1.14	331223	376627	ATP synthesis	F1F0-ATPase complex assembly
YKL176C	LST4______	+1.06	290567	309324	secretion	unknown; involved in secretion of nitroge- regulated permease
YLR110C	__________	+1.50	13931521	20877167	unknown	unknown; similar to Flo1p, Fig2p, Flo5p, Yal063p, and Ykr102p
YMR212C	EFR3______	-1.33	466284	351781	unknown	unknown; similar to myosin heavy chains; null requires PHO85
YNL271C	BNI1______	-1.06	154791	146035	bud site selection, bipolar	interacts with Rho1p
YOR009W	__________	+1.75	1236635	2164992	unknown	unknown; similar to PAU1 family
YOR385W	__________	+1.03	345801	354868	unknown	unknown
YPR082C	DIB1______	+1.23	422235	518091	unknown	unknown; similar to S. pombe dim1+
YBR060C	ORC2______	-1.28	366533	285593	DNA replication	origin recognition complex, 72 kD subunit
YCLX10C	__________	-1.04	237761	228580

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YDL177C	__________	+1.03	253736	262050	unknown	unknown
YDR298C	ATP5______	+1.41	918518	1295615	ATP synthesis	F1F0-ATPase subunit
YER003C	PMI40_____	+1.05	878210	919457	mannose metabolism	mannose-6-phosphate isomerase
YGR100W	MDR1______	-1.01	136523	134921	unknown	unknown
YHR114W	BZZ1______	-1.16	545985	472240	cytoskeleton (putative)	actin assembly complex component
YJR146W	__________	-1.33	198406	148826	unknown	unknown
YLR293C	GSP1______	-1.18	7351911	6212099	nuclear protein targeting	GTP-binding protein, ras superfamily
YMR032W	HOF1______	-1.08	250816	233227	cytokinesis	unknown
YNL079C	TPM1______	+1.24	2444004	3030545	cytoskeleton	tropomyosin
YOR197W	__________	+1.08	854810	924697	unknown	unknown
YPL177C	CUP9______	+1.05	621903	650026	Cu2+ ion homeostasis	putative DNA binding protein
YAR044W	OSH1______	-1.06	353580	334200	sterol biosynthesis (putative)	similar to human oxysterol binding protein
YBR260C	RGD1______	-1.13	237571	209567	unknown	GTPase-activating (GAP) protein (putative)
YDR129C	SAC6______	+1.26	822084	1036658	cytoskeleton	fimbrin homolog
YDR498C	SEC20_____	-1.04	350098	336124	secretion	unknown; ER membrane protein
YER184C	__________	+1.10	148815	163085	unknown	unknown; similar to transcription factors, has Zn[2]-Cys[6]
YGL191W	COX13_____	-1.18	1193234	1015221	oxidative phosphorylation	cytochrome-c oxidase subunit VIa
YIL090W	__________	-1.04	331050	317445	unknown	unknown
YJL192C	__________	-1.09	764447	702021	unknown	unknown; similar to E. coli
YKL188C	PXA2______	-1.02	152870	149813	transport	peroxisomal fatty acid transporter, ABC family
YLR122C	__________	+1.03	109104	112270	unknown	unknown
YNL283C	WSC2______	+1.10	411004	450947	cell wall biogenesis	alpha-1,4-glucan-glucosidase
YOR021C	__________	-1.40	1667506	1193501	unknown	unknown
YPR094W	__________	-1.07	338355	315471	unknown	unknown
YBR072W	HSP26_____	-1.03	90382	87491	diauxic shift	stress-induced protein
YCR010C	__________	-1.12	135665	121128	unknown	unknown
YDL189W	__________	-1.19	425275	356077	unknown	unknown
YDR310C	SUM1______	-1.13	128179	113699	silencing	nuclear protein
YER013W	PRP22_____	-1.11	219797	198844	mRNA splicing	RNA helicase
YGR110W	__________	+1.43	126091	180154	unknown	unknown
YHR126C	__________	+1.13	229830	260163	unknown	unknown; similar to members of the Pir1p/Hsp150p/Pir3p
YJR158W	HXT16_____	-1.16	166583	143129	transport	hexose permease
YLR305C	STT4______	-1.19	515316	432707	signaling, PKC1 pathway	phosphatidylinositol-4-kinase
YMR044W	IOC4______	+1.06	370278	391150	unknown	unknown
YNL091W	__________	-1.08	639725	591101	unknown	unknown; similar to Uso1p and human NF2 neurofibromatosis
YOR209C	NPT1______	+1.26	1214437	1528934	NAD biosynthesis	nicotinate phosphoribosyltransferase
YPL188W	POS5______	+1.11	354761	394539	unknown	unknown; similar to Utr1p and Yel041p
YBL009W	__________	-1.24	236792	191374	unknown	unknown
YBR272C	HSM3______	+1.00	232255	232441	mismatch repair	unknown; MutS homolog
YDL011C	__________	+1.12	144338	161591	unknown	unknown
YDR141C	DOP1______	-1.10	624740	568206	unknown	unknown; similar to Yps1p and E. nidulans dopA
YDR510W	SMT3______	+1.23	1569381	1937159	protein degradation	ubiquitin-like protein
YFL009W	CDC4______	-1.21	510254	422364	cell cycle	SCF-Cdc4p complex component
YGL203C	KEX1______	-1.30	669051	516133	secretion	carboxypeptidase (YSC-alpha)
YIL101C	XBP1______	-1.24	248814	201427	stress response	transcriptional repressor
YJL204C	__________	-1.28	792494	617516	unknown	unknown; similar to Tor2p, member of a family of
YKL200C	__________	-1.13	140723	125025
YLR134W	PDC5______	-1.18	11224788	9535961	glycolysis	pyruvate decarboxylase
YMR236W	TAF17_____	-1.35	621131	461205	transcription	TFIID 17 kD subunit
YNL293W	MSB3______	+1.33	213802	285098	unknown	unknown; suppresses bud emergence mutant
YOR033C	DHS1______	+1.01	236215	238587	DNA repair	exonuclease; also recombination
YPL011C	TAF47_____	-1.03	327270	316753	transcription	component of TAF(II) complex
YPR106W	ISR1______	-1.18	402248	340864	staurosporine resistance	protein kinase
YBR084C	RPL19A____	+1.12	15699086	17599932	protein synthesis	ribosomal protein L19A
YCR021C	HSP30_____	-1.14	376538	329708	diauxic shift	plasma membrane heat shock protein
YDL201W	__________	-1.36	503279	370965	unknown	unknown
YDR320C	__________	-1.41	374586	265916	unknown	unknown; similar to human transformation-sensitive
YER023W	PRO3______	+1.20	440518	526507	proline biosynthesis	delta 1-pyrroline-5-carboxylate reductase
YGL011C	SCL1______	+1.05	1306665	1376467	protein degradation	20S proteasome subunit YC7ALPHA/Y8
YGR122W	__________	-1.07	225638	210213	unknown	unknown
YHR137W	ARO9______	+1.46	249171	362578	aromatic amino acid metabolism	aromatic amino acid aminotransferase II
YJL011C	__________	-1.29	299999	232260	unknown	unknown
YKL010C	UFD4______	+1.03	102171	105277	protein degradation, ubiquitin-mediated	unknown; may influence multi-Ub chain topology
YLL011W	SOF1______	-1.35	513511	381707	rRNA processing	nucleolar snRNP protein
YLR316C	TAD3______	-1.01	221659	218657	tRNA processing	tRNA-specific adenosine deaminase subunit
YMR053C	STB2______	+1.20	138255	166264	unknown	binds Sin3p
YNL103W	MET4______	-1.06	400950	379636	sulfur amino acid metabolism	transcriptional activator
YOL011W	PLB3______	-1.07	333304	311603	phospholipid metabolism	phospholipase B
YOR221C	MCT1______	-1.23	336820	274804	fatty acid metabolism	malonyl-CoA:ACP transferase
YPL200W	__________	-1.05	109056	103372	unknown	unknown
YAR070C	__________	+1.26	106904	134749	unknown	unknown
YBL021C	HAP3______	-1.04	268134	258548	transcription	component of heterotrimeric CCAAT-binding factor
YBR284W	__________	+1.14	99948	114133	unknown	unknown; similar to AMP deaminase
YDL023C	__________	-1.07	153550	143981	unknown	unknown
YDR153C	__________	+1.09	194798	213174	unknown	unknown
YDR522C	SPS2______	+1.03	111328	114201	meiosis	unknown
YGL215W	CLG1______	-1.11	364448	327633	cell cycle	cyclin-like (Pho85p)
YHL019C	APM2______	+1.13	170940	193723	endocytosis	AP-2 complex subunit
YIL113W	__________	-1.00	119977	119726	unknown	protein phosphatase
YJL216C	__________	+1.07	134737	144428	unknown	unknown; similar to Mal62p (glucosidase P1)
YKL212W	SAC1______	-1.17	328574	281533	secretion	ER/Golgi ATP/ADP exchanger
YLR146C	SPE4______	-1.02	329374	321505	spermine biosynthesis	spermine synthase
YML020W	__________	-1.03	173689	169306	unknown	unknown
YMR247C	__________	-1.33	609831	458944	unknown	unknown
YNL305C	__________	+1.43	272576	389416	unknown	unknown; similar to Aspergillus nidulans negative-acting
YOR045W	TOM6______	-1.16	496049	428405	mitochondrial protein targeting	outer membrane translocase component
YPL023C	MET12_____	-1.27	359269	282531	methionine biosynthesis	methylenetetrahydrofolate reductase
YPR118W	__________	-1.29	971222	753309	unknown	unknown
YBR094W	__________	-1.18	360003	306093	unknown	unknown; similar to Mec1p and porcine tubulin-tyrosine
YCR031C	RPS14A____	-1.17	7214343	6151641	protein synthesis	ribosomal protein S14A
YDL213C	__________	-1.40	895671	637749	unknown	unknown
YDR332W	__________	-1.11	203372	182556	unknown	unknown; similar to DEAD box family helicases
YER035W	EDC2______	+1.85	277117	512426	mRNA processing	unknown; genetic interaction with dcp2-7
YGL023C	PIB2______	+1.01	255422	257584	signaling (putative)	unknown; binds phosphatidylinositol 3-phosphate
YGR134W	__________	+1.02	111514	114231	unknown	unknown
YHR147C	MRPL6_____	-1.06	442588	417182	protein synthesis	ribosomal protein, mitochondrial L6
YJL023C	PET130____	+1.14	190426	216691	protein synthesis, mitochondrial	unknown
YKL022C	CDC16_____	+1.04	212501	221115	cell cycle	anaphase-promoting complex subunit
YLL023C	__________	-1.05	358386	341648	unknown	unknown
YLR328W	__________	-1.01	363068	359886	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YMR065W	KAR5______	-1.18	209463	177811	mating; nuclear fusion	coiled-coil membrane protein
YNL115C	__________	+1.81	168722	304906	unknown	unknown
YOL023W	IFM1______	-1.08	171282	158771	protein synthesis	translation initiation factor 2, mitochondrial
YOR233W	KIN4______	-1.28	417896	325825	unknown	protein kinase
YPL212C	PUS1______	-1.35	551013	409488	tRNA processing	pseudouridine synthase
YBL033C	RIB1______	+1.09	78177	85483	flavin biosynthesis	GTP cyclohydrolase II
YBR296C	PHO89_____	+1.72	193644	332679	phosphate metabolism	Na+/Pi symporter
YDL035C	GPR1______	+1.03	276243	284262	signaling, pheromone pathway	G-protein coupled receptor, coupled to Gpa2p
YDR165W	__________	-1.50	996053	665754	unknown	unknown
YDR534C	__________	-1.25	193310	155014	unknown	unknown
YFL028C	CAF16_____	-1.02	410492	401440	transport	ATP-binding cassette (ABC) family
YGL226W	__________	+1.05	217614	228425	unknown	unknown; similar to Neurospora cytochrome-c oxidase
YIL125W	KGD1______	+1.28	233460	298006	respiration	alpha-ketoglutarate dehydrogenase
YJR004C	SAG1______	-1.79	1277504	715002	mating	alpha-agglutinin
YKL224C	__________	+1.27	241270	307334	unknown	unknown; similar to Ybr301p, member of the PAU1 family
YML031W	NDC1______	-1.07	454420	423414	cytoskeleton	spindle pole body duplication
YMR260C	TIF11_____	-1.22	5580272	4588855	protein synthesis	translation initiation factor eIF1a
YNL317W	PFS2______	-1.07	329617	309130	mRNA processing	polyadenylation factor subunit
YOR057W	SGT1______	-1.04	367100	351406	mitosis (putative)	unknown; suppresses skp1 mutation
YPL035C	__________	-1.02	207007	203580	unknown	unknown
YPR130C	__________	-1.17	884236	753095	unknown	unknown
YBR106W	PHO88_____	+1.00	2824888	2827385	phosphate transport	regulator of Pho81
YCR043C	__________	-1.23	467072	378547	unknown	unknown
YDL225W	SHS1______	-1.02	411649	405390	cytokinesis	septin (putative)
YDR344C	__________	-1.02	117142	114399	unknown	unknown
YER045C	__________	-1.09	269639	247899	unknown	unknown
YGL035C	MIG1______	-1.03	200288	194070	glucose repression	transcriptional repressor
YGR146C	__________	+1.30	216203	281560	unknown	unknown
YHR159W	__________	-1.11	128805	116545	unknown	unknown
YJL035C	TAD2______	-1.25	315477	251529	tRNA processing	tRNA-specific adenosine deaminase subunit
YLL035W	GRC3______	-1.70	412786	243481	unknown	unknown; essential
YLR340W	RPP0______	-1.02	14174387	13834872	protein synthesis	ribosomal protein L10, acidic
YMR076C	PDS5______	-1.34	531834	396307	mitosis, sister chromatid cohesion	unknown
YNL127W	__________	-1.09	197200	181701	unknown	unknown; similar to Fus2p
YOL035C	__________	-1.02	414668	405309	unknown	unknown
YOR245C	__________	+1.20	350672	421899	unknown	unknown
YPL224C	MMT2______	+1.14	277849	317350	mitochondrial ion transport	transmembrane domain (2) protein
YBL045C	COR1______	+1.15	940281	1076870	oxidative phosphorylation	ubiquinol cytochrome-c reductase
YDL047W	SIT4______	-1.08	453860	421066	cell cycle	type 2A related protein phosphatase
YDR175C	__________	+1.05	233797	244559	unknown	unknown
YFL038C	YPT1______	+1.15	905199	1039163	secretion	rab GTPase; ER-to-Golgi
YGL238W	CSE1______	-1.18	962930	819366	mitosis, chromosome segregation	kinetochore protein (putative)
YHL042W	__________	-1.10	146451	132560	unknown	unknown; similar to subtelomerically-encoded proteins
YIL137C	__________	+1.09	217972	237010	unknown	unknown; similar to aminopeptidases
YJR015W	__________	-1.13	439363	389080	unknown	unknown; similar to Sng1p and multidrug resistance proteins
YKR011C	__________	+1.44	179226	258676	unknown	unknown
YLR168C	(MSF1)____	+1.22	253319	308377	unknown	intramitochondrial protein sorting (putative)
YML041C	__________	+1.37	223182	305456	unknown	unknown
YMR272C	SCS7______	-1.05	601582	571697	fatty acid metabolism	ceramide hydroxylase
YNL329C	PEX6______	-1.03	366854	357645	peroxisome biogenesis	ATPase (putative)
YOR069W	VPS5______	+1.14	341728	387976	vacuolar protein targeting	sorting nexin family
YPL047W	__________	-1.02	794897	778880	unknown	unknown
YPR140W	__________	+1.00	307542	308205	unknown	unknown; similar to human Barth syndrome gene tafazzin
YBR117C	TKL2______	-1.39	272571	196018	pentose phosphate cycle	transketolase
YCR055C	__________	-1.60	713068	444448
YDL237W	__________	+1.11	422157	468708	unknown	unknown
YDR356W	NUF1______	-1.33	230792	174121	cytoskeleton	spindle pole body component
YER056C	FCY2______	-1.36	12576306	9265090	transport	purine-cytosine permease
YGL047W	__________	-1.19	357219	301002	unknown	unknown; similar to Plasmodium falciparum gametocytogenesis
YGR158C	MTR3______	-1.17	373404	318584	mRNA transport	nucleolar protein
YHR171W	APG7______	+1.21	145981	176201	autophagy	unknown; similar to ubiquitin-activating enzymes
YJL048C	__________	-1.08	310201	286145	unknown	unknown
YKL045W	PRI2______	+1.05	210886	221277	DNA replication	polymerase alpha 58 kD subunit (DNA primase)
YLL047W	__________	-1.40	162159	116136	unknown	unknown
YLR352W	__________	+1.00	146193	146845	unknown	unknown
YMR087W	__________	+1.24	299095	369845	unknown	unknown
YNL139C	RLR1______	-1.10	420675	382616	transcription	pleiotropic regulatory protein
YOL047C	__________	+1.08	135669	146013	unknown	unknown
YOR257W	CDC31_____	+1.09	589151	639527	cytoskeleton	spindle pole body component
YPL236C	__________	+1.03	161007	165220	unknown	unknown
YBL057C	__________	-1.25	609289	485736	unknown	unknown
YDL059C	RAD59_____	+1.05	140616	147272	DNA repair and recombination	unknown
YDR186C	__________	+1.06	187200	198486	unknown	unknown
YFL050C	ALR2______	-1.08	112195	104285	aluminum resistance	ion transporter (putative)
YGL250W	__________	+1.13	134300	152150	unknown	unknown
YHR002W	__________	-1.04	229454	219632	unknown	unknown; similar to Grave's disease protein; mitochondrial carrier (MCF) family
YIL149C	MLP2______	-1.32	758958	574251	nuclear protein targeting (putative)	unknown; similar to Mlp1p
YJR026W	__________	+1.09	3449112	3770694	unknown	unknown; similar to Hyr1p, Ybr244p, and glutathione peroxidases
YKR023W	__________	-1.08	304181	280451	unknown	unknown
YLR180W	SAM1______	-1.43	2216488	1551515	methionine metabolism	S-adenosylmethionine synthetase
YML051W	GAL80_____	-1.20	376820	312854	galactose regulation	transcriptional repressor
YMR284W	YKU70_____	+1.06	150879	160212	DNA repair	DNA binding; Ku70 homolog
YNR002C	FUN34_____	+1.15	165164	190000	unknown	unknown
YOR081C	__________	-1.03	260681	252571	unknown	unknown
YPL059W	GRX5______	+1.23	778976	957977	oxidative stres response	glutaredoxin
YPR152C	__________	-1.09	144241	132052	unknown	unknown; similar to Ykl012p
YBR129C	OPY1______	-1.16	387007	334766	mating	unknown
YCR067C	SED4______	-1.05	385526	366286	secretion	ER vesicle formation
YDR001C	NTH1______	+2.24	311738	697805	trehalose metabolism	alpha, alpha-trehalase
YDR366C	__________	-2.21	11262939	5095487	unknown	unknown
YER066W	__________	-1.10	276449	251860	unknown	unknown; similar to Cdc4p, has one WD (WD-40) domain
YGL059W	__________	+1.04	167534	174421	unknown	unknown; similar to Rat branched-chain alpha-ketoacid
YGR166W	KRE11_____	+1.59	354808	565440	cell wall biogenesis	regulates beta-1,6-glucan synthesis
YHR183W	GND1______	+1.43	2140554	3054487	pentose phosphate cycle	6-phosphogluconate dehydrogenase, decarboxylating
YJL060W	__________	+1.69	378238	638564	unknown	unknown; similar to kynurenine aminotransferase
YKL057C	NUP120____	+1.02	241249	245412	nuclear protein targeting	nuclear pore protein
YLL059C	__________	+1.04	107948	111769	unknown	unknown
YLR364W	__________	-1.03	120008	116338	unknown	unknown; similar to yeast glutaredoxin-like protein
YMR099C	__________	+1.19	1045395	1242222	unknown	unknown
YNL151C	RPC31_____	-1.77	1010669	571792	transcription	RNA polymerase III 31 kD subunit

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YOL057W	__________	-1.06	558389	525983	unknown	unknown
YOR269W	PAC1______	-1.05	222756	211511	cytoskeleton (putative)	unknown; required in the absence of Cin8p
YPL248C	GAL4______	+1.12	133388	148844	galactose regulation	transcriptional activator
YBL069W	AST1______	-1.08	305513	283796	plasma membrane protein targeting	targets plasma membrane ATPase
YDL071C	__________	-1.16	121018	104328	unknown	unknown
YDR198C	__________	-1.18	265538	224178	unknown	unknown
YFL062W	COS4______	+1.14	1302577	1489359	unknown	unknown; similar to subtelomerically-encoded proteins
YGL262W	__________	-1.10	131399	119251	unknown	unknown
YHR013C	ARD1______	-1.30	1100014	843275	protein processing	protein N-acetyltransferase subunit
YIL160C	POT1______	+1.05	140505	146908	fatty acid metabolism	peroxisomal 3-oxoacyl CoA thiolase
YJR038C	__________	-1.13	131328	116674	unknown	unknown
YKR035C	__________	-1.15	574808	501491	unknown	unknown
YLR192C	HCR1______	-1.09	969170	890946	unknown	unknown; high copy suppressor of rpg1
YML062C	MFT1______	-1.13	415739	367355	mitochondrial protein targeting	mitochondrial targeting protein
YNR014W	__________	-1.29	264605	205002	unknown	unknown
YOR093C	__________	-1.02	352504	346494	unknown	unknown
YPL069C	BTS1______	+1.03	355075	364513	protein processing	geranylgeranyl diphosphate synthase
YPR160W	GPH1______	+1.07	115620	123613	glycogen metabolism	glycogen phosphorylase
YBR141C	__________	-1.15	261015	227658	unknown	unknown
YCR079W	__________	-1.02	158992	156385	unknown	protein phosphatase
YDR013W	__________	-1.06	178645	168085	unknown	unknown
YDR378C	LSM6______	-1.21	677354	562103	mRNA splicing (putative)	unknown; similar to snRNA-associated protein
YER075C	PTP3______	-1.11	335758	303127	signaling, pheromone and high osmolarity pathways	protein tyrosine phosphatase
YGL071W	RCS1______	-1.06	112126	105849	iron transport	transcriptional activator
YGR178C	PBP1______	+1.08	417865	451877	mRNA processing	poly(A)-binding protein binding protein
YHR195W	NVJ1______	+1.21	273460	330068	vacuolar protein targeting (putative)	unknown; Vac8p binding protein
YJL072C	__________	+1.04	209516	218829	unknown	unknown
YKL069W	__________	+1.39	297933	415413	unknown	unknown
YLR004C	__________	-1.19	289266	242950	unknown	unknown; similar to allantoate transport protein
YLR376C	__________	+1.20	122881	147848	unknown	unknown
YMR111C	__________	+1.09	150724	163636	unknown	unknown; similar to Msn1p
YNL163C	__________	-1.21	264146	218038	protein synthesis	translation elongation factor eEF4
YOL069W	NUF2______	-1.04	355341	340819	cytoskeleton	spindle pole body component
YOR281C	PLP2______	-1.15	816937	707592	unknown	unknown; similar to phosducins
YMR326C	__________	+1.06	120361	127272	unknown	unknown; similar to members of the PAU1 family
YBL081W	__________	-1.30	749634	577308	unknown	37% identity to Drosophila l not protein
YDL083C	RPS16B____	-1.42	12963941	9110707	protein synthesis	ribosomal protein S16B
YDR210W	__________	+1.21	841120	1020754	unknown	unknown
YFR006W	__________	-1.17	790272	673166	unknown	unknown; similar to human X-pro dipeptidase
YGR011W	__________	+1.03	255550	263600	unknown	unknown
YHR024C	MAS2______	-1.13	418294	369225	protein processing	mitochondrial processing protease subunit
YJR050W	ISY1______	-1.02	317182	310511	mRNA splicing	unknown; interacts with spliceosome
YKR047W	__________	+1.05	1267060	1334530	unknown	unknown
YLR204W	QRI5______	+1.18	426249	504469	unknown	unknown
YML074C	NPI46_____	-1.46	3444557	2361356	protein folding	peptidyl-prolyl cis-trans isomerase
YMR305C	SCW10_____	+1.79	2218409	3977556	cell wall biogenesis	glucanase (putative)
YNR026C	SEC12_____	+1.05	376370	393923	secretion	ER-to-Golgi GDP/GTP exchange factor
YOR105W	__________	+1.04	372516	388977	unknown	unknown
YPL081W	RPS9A_____	-1.25	11960849	9548144	protein synthesis	ribosomal protein S9A
YPR172W	__________	-1.06	202593	191734	unknown	unknown
YBR153W	RIB7______	-1.59	488373	306343	flavin biosynthesis	HTP reductase
YCR090C	__________	-1.40	555788	395981	unknown	unknown
YDR025W	RPS11A____	-1.22	15743692	12905670	protein synthesis	ribosomal protein S11A
YDR390C	UBA2______	-1.51	562481	373015	protein degradation, ubiquitin-mediated	E1-like (ub.-activating) enzyme
YER087C	SBH1______	+1.18	977635	1152902	secretion	ER protein translocation complex subunit
YGL083W	SCY1______	-1.09	222278	203972	unknown	unknown
YGR190C	__________	-1.12	139610	124424	unknown	unknown
YHR207C	__________	+1.01	316776	320730	unknown	unknown
YJL084C	__________	-1.08	317254	293413	unknown	unknown
YKL081W	TEF4______	-1.36	3625936	2673092	protein synthesis	translation elongation factor EF-1gamma
YLR016C	__________	-1.24	291459	235223	unknown	unknown
YLR388W	RPS29A____	-1.26	7503657	5951973	protein synthesis	ribosomal protein S29A
YMR122C	__________	-1.12	237109	211403	unknown	unknown
YNL175C	NOP13_____	-1.92	1597231	831466	unknown	unknown; nucleolar protein
YOL081W	IRA2______	-1.12	195758	174718	signaling, Ras pathway	GTPase-activating protein for Ras1p and Ras2p
YOR293W	RPS10A____	-1.41	15903873	11306705	protein synthesis	ribosomal protein S10A
YPL269W	KAR9______	-1.18	306173	259014	cytoskeleton	cytoplasmic microtubule orientation
YBL093C	ROX3______	+1.10	269789	296005	transcription	RNA polymerase mediator subunit
YDL095W	PMT1______	+1.08	385299	417867	protein glycosylation	dolichyl phosphate-D-mannose:protein O-D-mannosyltransferase
YDR218C	SPR28_____	-1.05	123447	117561	sporulation	septin-related protein
YFR018C	__________	-1.15	157127	136044	unknown	unknown; similar to human glutaminyl-peptide
YGR023W	MTL1______	-1.32	302717	229881	signaling (putative)	unknown; acts with Mid2p
YHR036W	__________	-2.22	508000	228377	unknown	unknown
YIR006C	PAN1______	-1.30	188387	144804	cytoskeleton and endocytosis	actin filament organization
YJR062C	NTA1______	-1.05	121369	115548	protein degradation	amino-terminal amidase
YKR059W	TIF1______	-1.18	12857262	10926262	protein synthesis	translation initiation factor eIF4A
YLR216C	CPR6______	+1.10	944071	1040108	protein folding (putative)	peptidyl-prolyl cus-trans isomerase
YMR316W	DIA1______	+1.52	466331	708780	pseudohyphal growth (putative)	unknown
YNR038W	DBP6______	-1.26	471164	374821	rRNA processing	RNA helicase, putative
YOR117W	RPT5______	+1.18	1122755	1326980	protein degradation	26S proteasome regulatory subunit
YPL093W	NOG1______	-1.33	938506	704287	unknown	nucleolar G protein
YPR184W	GDB1______	+1.02	130114	132308	glycogen utilization	glycogen debranching enzyme
YBR164C	ARL1______	-1.20	896138	746301	secretion	ADP-ribosylation factor-like protein
YCR101C	__________	+1.00	141419	141804	unknown	unknown; similar to Pep1p, probably represents a fragmented coding region of a pseudogene
YDR035W	ARO3______	+1.01	816665	825140	aromatic amino acid biosynthesis	DAHP synthase
YDR402C	DIT2______	-1.14	151234	132176	sporulation, spore wall biogenesis	synthesizes dityrosine
YER097W	__________	-1.18	130813	111004	unknown	unknown
YGL095C	VPS45_____	+1.00	320715	321805	vacuolar protein targeting	membrane protein
YGR202C	PCT1______	-1.16	353688	304305	phospholipid metabolism	cholinephosphate cytidylyltransferase
YHR216W	IMD2______	-1.68	4329336	2577459	purine biosynthesis	IMP dehydrogenase
YJL096W	MRPL49____	+1.03	547698	562000	protein synthesis	ribosomal protein, mitochondrial L49
YKL093W	MBR1______	-1.26	266728	211653	mitochondrial biogenesis	unknown
YLR028C	ADE16_____	+1.16	450238	523436	purine biosynthesis	5-aminoimidazole-4-carboxamide ribonucleotide (AICAR) transformylase/IMP cyclohydrolase
YLR400W	__________	-1.52	376287	247831	unknown	unknown
YMR134W	__________	+1.07	385125	411644	unknown	unknown
YNL187W	__________	-1.06	130242	122756	unknown	unknown
YOL093W	__________	-1.39	614447	441654	unknown	unknown
YOR304W	ISW2______	+1.03	925134	956317	unknown	unknown; similar to Drosophila nucleosome remodeling factor ISW1
YPL281C	ERR2______	-1.49	219458	147769	unknown	unknown; similar to enolase
YAL013W	DEP1______	-1.20	215818	180358	phospholipid metabolism	regulator

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YBR177C	EHT1______	+1.11	245472	273391	unknown	alcohol acyl transferase (putative)
YCRX07W	__________	-1.04	121430	116644
YDR048C	__________	+1.00	100650	100994	unknown	unknown
YDR415C	__________	-1.22	282497	232387	unknown	unknown; similar to bacterial leucyl aminopeptidase
YER110C	KAP123____	-1.72	440812	256629	nuclear protein targeting	beta-karyopherin
YGL108C	__________	-1.15	212981	185673	unknown	unknown
YGR215W	__________	+1.15	337335	388932	unknown	unknown
YIL012W	__________	-1.11	112439	101527	unknown	unknown
YJL109C	__________	-1.52	489530	321630	unknown	unknown
YKL105C	__________	+1.25	181590	227633	unknown	unknown
YLR039C	RIC1______	-1.04	125282	120420	transcription	(putative) transcriptional regulator of rRNA and proteins
YLR411W	CTR3______	-1.03	91624	89199	transport	copper transporter
YMR146C	TIF34_____	-1.32	1957391	1484607	protein synthesis	translation initiation factor eIF3, P39 subunit
YNL200C	__________	+1.31	162387	212237	unknown	unknown
YOL104C	NDJ1______	-1.31	152833	116402	meiosis, chromosome segregation	unknown
YOR316C	COT1______	-1.02	288378	282778	Co2+ ion homeostasis	mitochondrial membrane protein
YPR011C	__________	-1.05	264768	252649	unknown	unknown; similar to human Grave's disease carrier protein
YBL104C	__________	+1.10	250930	276766	unknown	morphology (putative)
YCL011C	GBP2______	+1.06	438464	466145	unknown	telomere-associated protein (putative)
YDL108W	KIN28_____	-1.06	382473	359190	transcription	protein kinase; also TFIIH subunit
YDR231C	COX20_____	+1.25	262908	327967	respiration	req. for cytochrome oxidase assembly
YEL012W	UBC8______	+1.30	208811	271840	protein degradation, ubiquitin-mediated	E2 ub.-conjugating enzyme
YFR031C	SMC2______	+1.24	14155301	17552051	mitosis, chromosome condensation and segregation	unknown
YGR034W	RPL26B____	-1.57	15342383	9768904	protein synthesis	ribosomal protein L26B
YHR048W	__________	-1.10	235855	213989	unknown	major facilitator superfamily
YIR018W	YAP5______	-1.19	154081	129915	transcription	basic leu zipper transcription factor
YJR075W	HOC1______	-1.46	485285	332260	protein glycosylation	putative mannosyltransferase
YKR072C	SIS2______	-1.18	719592	611386	cell cycle and ion homeostasis	unknown
YML098W	TAF19_____	-1.21	396324	326761	transcription	TFIID 19 kD subunit
YNL012W	SPO1______	-1.12	134503	120084	meiosis (spor.)	transcriptional regulator
YNR051C	BRE5______	-1.41	814925	577502	secretion (putative)	unknown; brefeldin A sensitive
YOR130C	ORT1______	+1.03	255162	261570	arginine biosynthesis	amino acid transporter
YPL106C	SSE1______	-1.23	2173910	1765694	calmodulin signaling	HSP70 family
YPR197C	__________	-1.04	162713	156653	unknown	unknown
YAL025C	MAK16_____	-1.53	831309	543897	dsRNA virus propagation	unknown; essential gene
YBR189W	RPS9B_____	-1.18	11674933	9890518	protein synthesis	ribosomal protein S9B
YCRX19W	__________	-1.22	250933	206049
YDR060W	__________	-1.53	790166	517514	unknown	unknown; similar to human CCAAT-binding protein (GB:Z49209)
YDR427W	RPN9______	+1.26	818905	1028099	protein degradation	26S proteasome regulatory subunit
YER121W	__________	-1.09	195344	178747	unknown	unknown
YGL120C	PRP43_____	-1.70	390354	229697	mRNA splicing	spliceosome disassembly factor; RNA helicase
YGR227W	DIE2______	-1.06	149635	141240	glucosylation?	glucosyltransferase
YIL023C	__________	+2.00	293125	584825	unknown	unknown; similar to Atx2
YJL121C	RPE1______	-1.12	1218867	1092380	pentose phosphate cycle	Ribulose-5-phosphate 3-epimerase
YKL117W	SBA1______	+1.07	3394938	3643097	protein folding	Hsp90 associated co-chaperone
YLR051C	__________	-1.11	480288	431798	unknown	unknown
YLR423C	APG17_____	+1.14	153186	174521	unknown	unknown; similar to human cytokeratin 9 (SP:P35527)
YMR157C	__________	-1.06	310955	293342	unknown	unknown
YNL212W	VID27_____	-1.03	435059	420712	vacuolar protein targeting (putative)	unknown
YOL116W	MSN1______	-1.11	256775	231690	nutrient sensing	transcriptional activator
YOR328W	PDR10_____	-1.21	295429	243598	transport	ATP-binding cassette (ABC) family
YPR023C	EAF3______	-1.06	557771	525408	unknown	acetyltrasnferase complex component (putative)
YBR003W	COQ1______	+1.06	259241	273616	ubiquinone biosynthesis	exaprenyl pyrophosphate synthetase
YCL024W	KCC4______	-1.12	111455	99411	bud growth	protein kinase
YDL120W	YFH1______	+1.06	424219	448537	iron homeostasis, mitochondrial	frataxin homolog
YEL023C	__________	+1.07	108142	115927	unknown	unknown
YFR040W	SAP155____	-1.05	475853	453110	cell cycle	Sit4p-associated protein
YGR041W	BUD9______	+1.16	293606	341774	bud site selection, bipolar	unknown
YHR058C	MED6______	-1.16	243437	209227	transcription	RNA polymerase II mediator subunit
YIR028W	DAL4______	+1.15	155984	179225	allantoin utilization	allantoin permease
YJR088C	__________	-1.11	623004	560440	unknown	unknown
YKR084C	HBS1______	-1.01	409654	406904	unknown	unknown; similar to translation elongation factor EF-1alpha
YLR239C	__________	-1.02	253660	249364	unknown	unknown; similar to E. coli LipB protein which is
YML108W	__________	-1.26	371298	293828	unknown	unknown
YNL024C	__________	-1.12	221045	196670	unknown	unknown
YNR063W	__________	-1.04	129766	124694	unknown	unknown; similar to transcription factors, has Zn[2]-Cys[6]
YOR142W	LSC1______	+1.21	634460	770522	TCA cycle	succinyl-CoA ligase alpha subunit
YPL118W	MRP51_____	-1.11	619967	558943	protein synthesis	ribosomal protein, mitochondrial small subunit
YBR201W	DER1______	+1.14	147730	168988	protein degradation, ER	unknown
YDR072C	IPT1______	+1.43	480298	685778	sphingolipid biosynthesis	inositolphosphotransferase 1
YDR439W	LRS4______	+1.04	231091	240698	silencing (rDNA) (putative)	unknown
YER133W	GLC7______	-1.05	903160	861781	glycogen metabolism	protein phosphatase
YGL132W	__________	+1.02	126380	128885	unknown	unknown
YGR239C	PEX21_____	-1.13	288815	256522	peroxisome biogenesis (putative)	unknown, "peroxin"
YIL035C	CKA1______	+1.02	604163	618644	cell cycle (putative)	casein kinase II, catalytic subunit
YJL133W	MRS3______	+1.12	409858	458914	transport	mitochondrial carrier
YKL129C	MYO3______	+1.22	118987	145154	cytoskeleton	myosin, class I
YLR063W	__________	-1.04	119156	114508	unknown	unknown
YLR433C	CNA1______	-1.34	303784	226305	signaling	calcineurin catalytic A subunit
YMR168C	CEP3______	-1.08	288040	265909	mitosis	kinetochore protein complex, 71 KD subunit
YNL224C	__________	-1.06	289829	272584	unknown	unknown
YOL128C	__________	-1.29	224960	174586	unknown	protein kinase
YOR340C	RPA43_____	-1.88	1207520	641284	transcription	RNA polymerase I 36 kD subunit
YPR035W	GLN1______	+1.72	3464143	5964597	glutamine biosynthesis	glutamine synthetase
YBR013C	__________	+1.12	186809	208854	unknown	unknown
YCL036W	__________	-1.48	301916	204417	unknown	unknown
YDL131W	LYS21_____	-1.16	1405840	1215555	lysine biosynthesis	homocitrate synthase
YDR255C	__________	+1.10	157418	173481	unknown	unknown
YEL035C	UTR5______	-1.12	111593	99849	unknown	unknown
YFR052W	RPN12_____	+1.04	801713	830535	protein degradation	26S proteasome regulatory subunit
YGR053C	__________	-1.03	143078	139358	unknown	unknown
YHR069C	RRP4______	-1.11	567233	508833	rRNA processing	3'->5' exoribonuclease
YIR040C	__________	-1.03	136875	133438	unknown	unknown; similar to Yil174p, Yil175p, and Ycr103p, member of
YJR099W	YUH1______	+1.19	290324	344789	protein degradation, ubiquitin-mediated	ubiquitin-specific protease
YKR096W	__________	+1.12	97006	108352	unknown	unknown; similar to aldehyde dehydrogenase
YLR251W	__________	+1.25	145368	182291	unknown	unknown; similar to mouse MPV17 protein
YML119W	__________	-1.01	392912	389502	unknown	unknown
YNR075W	COS10_____	-1.14	117453	103476	unknown	unknown; similar to subtelomerically-encoded proteins
YOR152C	__________	+1.42	208563	296969	unknown	unknown
YPL130W	SPO19_____	-1.09	124829	114405	sporulaiton	GPI-protein, meiosis-specific

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YAL045C	__________	+1.22	259965	318083	unknown	unknown
YBR213W	MET8______	-1.19	152188	127621	sulfate assimilation	siroheme synthase
YDR084C	__________	+1.07	249002	266063	unknown	unknown
YDR451C	__________	+1.04	174800	181853	unknown	unknown; similar to Yox1p, which binds Leu-tRNA (SP:P34161)
YER143W	DDI1______	+1.02	237252	242416	unknown	unknown; induced by DNA damage
YGL144C	__________	+1.01	124928	126582	unknown	unknown
YGR251W	__________	-1.37	342256	249147	unknown	unknown
YIL047C	SYG1______	-1.10	370258	335282	signaling (putative)	pheromone pathway
YJL145W	__________	-1.47	582010	394897	unknown	unknown
YKL141W	SDH3______	+1.62	421632	681298	TCA cycle, oxidative phosphorylation	succinate dehydrogenase cytochrome b
YLR075W	RPL10_____	-1.27	15592273	12320039	protein synthesis	ribosomal protein L10
YLR445W	__________	-1.13	214183	188897	unknown	unknown
YMR178W	__________	+1.09	635306	690853	unknown	unknown
YNL236W	SIN4______	-1.16	364038	313135	transcription	RNA polymerase II mediator subunit
YOL140W	ARG8______	+1.00	195282	195911	arginine biosynthesis	acetylornithine aminotransferase
YOR350C	MNE1______	+1.01	203739	205477	unknown	unknown; similar to Lucilia illustris mitochondria cytochrome oxidase
YPR047W	MSF1______	+1.15	175023	200624	protein synthesis	tRNA synthetase, mitochondrial, phenylalanyl, subunit
YBR025C	__________	-1.63	2844118	1743985	unknown	unknown
YCL048W	__________	-1.08	122718	113930	unknown	unknown; similar to Ecm33p and Sps2p
YDL142C	CRD1______	+1.06	232621	245937	lipid biosynthesis	cardiolipin synthase
YDR263C	DIN7______	-1.13	209298	185167	DNA repair (putative)	DNA damage-inducible
YEL047C	__________	+1.38	357783	494986	unknown	putative fumarate reductase
YGR065C	VHT1______	-1.17	309503	265622	transport	H+-biotin symporter
YHR079C	SAE3______	-1.14	315397	276145	meiosis, recombination	unknown
YJR111C	__________	-1.14	208869	183531	unknown	unknown
YLR260W	LCB5______	-1.09	244789	223749	sphingolipid metabolism	long chain base kinase
YML131W	__________	+1.32	323431	428301	unknown	unknown
YNL046W	__________	+1.33	412324	547238	unknown	unknown
YOR164C	__________	-1.21	835620	691952	unknown	unknown
YPL142C	__________	-1.23	14563226	11845257	unknown	unknown
YAL059W	ECM1______	-1.84	731282	397810	cell wall biogenesis	unknown
YBR225W	__________	+1.04	145362	151377	unknown	unknown
YDR096W	GIS1______	-1.06	154581	146405	unknown	unknown
YDR463W	STP1______	-1.06	283270	266738	tRNA splicing	transcription
YER153C	PET122____	-1.04	105543	101633	protein synthesis	translation activator of COX3
YGL156W	AMS1______	+1.23	187777	231677	cell wall catabolism	vacuolar alpha-mannosidase
YGR263C	__________	+1.09	201712	219606	unknown	unknown
YIL059C	__________	+1.02	226847	231900	unknown	unknown
YJL157C	FAR1______	-1.17	253530	216991	cell cycle	Cdc28p kinase inhibitor
YKL153W	__________	+1.28	15853810	20361215	unknown	unknown
YLR087C	__________	+1.35	192786	259469	unknown	unknown
YLR457C	NBP1______	+1.01	172138	173857	unknown	Nap1p-binding protein
YMR190C	SGS1______	+1.13	121722	137969	mitosis, chromosome segregation	putative DNA helicase
YNL248C	RPA49_____	+1.16	105858	122911	transcription	RNA polymerase I 46 kD subunit
YOL152W	FRE7______	-1.47	294749	199881	unknown	unknown; similar to Fre1p and Fre2p
YOR362C	PRE10_____	+1.34	1287670	1725823	protein degradation	20S proteasome subunit C1 (alpha7)
YPR059C	__________	-1.15	489120	424662	unknown	unknown
YBR037C	SCO1______	-1.20	223198	186749	respiration	Cox1p and Cox2p stability (putative)
YCL060C	__________	-1.18	105625	89527
YDL154W	MSH5______	-1.06	106846	101237	DNA repair	MutS homolog; also recombination
YDR275W	__________	-1.25	310927	249729	unknown	unknown
YGR077C	PEX8______	-1.01	278375	275764	peroxisome biogenesis	unknown
YHR091C	MSR1______	-1.11	372250	335243	protein synthesis	tRNA synthetase, arginyl
YJR123W	RPS5______	-1.17	15577186	13358137	protein synthesis	ribosomal protein S5
YLR271W	__________	-1.26	475051	377236	unknown	unknown; similar to retrovirus-related protease
YMR010W	__________	+1.46	347148	507859	unknown	unknown
YNL056W	__________	+1.23	583281	715168	unknown	unknown
YOR176W	HEM15_____	+1.14	527536	599520	heme biosynthesis	ferrochelatase (protoheme ferrolyase)
YPL154C	PEP4______	+2.80	1207881	3378025	protein degradation	vacuolar aspartyl protease
YAR002W	NUP60_____	-1.01	468315	461912	nuclear protein targeting	nuclear pore protein
YBR237W	PRP5______	+1.21	147507	178188	mRNA splicing	RNA helicase
YDR106W	ARP10_____	-1.00	114206	114043	cytoskeleton (putative)	actin-related protein
YDR475C	__________	-1.04	107872	103518	unknown	unknown
YER163C	__________	+1.86	312671	580219	unknown	unknown
YGL168W	__________	+1.30	617468	800500	unknown	unknown
YGR275W	RTT102____	+1.02	498134	507731	transposition (putative)	unknown; regulator of Ty1 transposition
YIL069C	RPS24B____	-1.18	15339598	12963838	protein synthesis	ribosomal protein S24B
YJL169W	__________	-1.29	617259	477610	unknown	unknown
YKL165C	MCD4______	-1.02	412490	404831	sporulation	morphogenesis checkpoint
YLR099C	ICT1______	+1.59	304310	484388	copper ion homeostasis (putative)	unknown
YNL260C	__________	-1.02	287196	281008	unknown	unknown
YOL164W	__________	-1.05	202946	193390	unknown	unknown; similar to Pseudomonas sp. alkyl sulfatase
YOR374W	ALD4______	+2.59	312669	810094	ethanol utilization	mitochondrial aldehyde dehydrogenase
YPR071W	__________	+1.10	111738	122828	unknown	unknown; similar to Yil029p (GB:Z49219)
YBR049C	REB1______	-1.40	361371	258458	transcription	transcription factor
YCL075W	__________	-1.04	95551	91820	unknown	encoded by Ty5-1
YDL166C	__________	-1.19	726511	612703	unknown	unknown
YDR287W	__________	+1.18	229018	269338	unknown	unknown; similar to inositol monophosphatase (SP:P29218,
YEL070W	__________	-1.05	112722	107268	unknown	unknown; similar to E. coli D-mannonate oxidoreductase
YGR089W	__________	+1.09	211023	229315	unknown	unknown; similar to human desmoplakin I PIR:A35536
YHR103W	SBE22_____	-1.04	186342	178654	bud growth	unknown
YJR135C	MCM22_____	-1.07	214325	200416	mitosis, chromosome segregation	unknown
YLR283W	__________	+1.05	221692	233516	unknown	unknown
YMR022W	QRI8______	+1.41	597504	840892	protein degradation, ubiquitin-mediated	E2 ub.-conjugating enzyme
YNL068C	FKH2______	-1.20	272158	226131	unknown	unknown; similar to Drosophila forkhead
YOR188W	MSB1______	-1.25	594501	476337	polarized growth	unknown
YPL166W	__________	+1.01	119164	119942	unknown	unknown
YAR027W	__________	+1.39	316231	439349	unknown	unknown; similar to subtelomerically-encoded proteins
YBR249C	ARO4______	-1.20	1619635	1345542	aromatic amino acid biosynthesis	2-dehydro-3-deoxyphosphoheptonate aldolase
YDR118W	APC4______	-1.03	173751	169114	cell cycle	anaphase-promoting complex subunit
YDR487C	RIB3______	+1.10	713053	785327	flavin biosynthesis	3,4-dihydroxy-2-butanone 4-phosphate synthase
YER173W	RAD24_____	-1.08	202705	187506	DNA repair; cell cycle	exonuclease, putative; checkpoint protein
YGL180W	APG1______	+1.09	109272	119609	autophagy	protein kinase
YGR287C	__________	+1.26	169773	213304	unknown	unknown; similar to alpha-D-glucosidase (maltase) (YGR287C
YIL080W	__________	-1.02	288095	282222	unknown	unknown
YJL181W	__________	-1.04	140466	134582	unknown	unknown
YKL177W	__________	-1.16	197535	170984	unknown	unknown
YLR111W	__________	-1.18	123486	104505	unknown	unknown
YMR213W	CEF1______	-1.25	261837	209056	unknown	unknown; similar to S. pombe cdc5+
YNL272C	SEC2______	-1.05	511011	488526	secretion	GDP/GTP exchange factor for Sec4p

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YOR010C	TIR2______	+1.14	612402	700604	unknown	unknown; induced by cold shock
YOR386W	PHR1______	-1.09	146359	134294	DNA repair	deoxyribodipyrimidine photolyase
YPR083W	__________	-1.06	204811	192360	unknown	unknown; similar to Halobacterium holobium cell surface
YBR061C	__________	-1.25	505545	403121	unknown	unknown; similar to Ctr86p and E. coli ftsJ
YCLX11W	__________	-1.13	718761	634867
YDL178W	AIP2______	-1.41	535507	380184	unknown	actin interacting protein
YDR299W	BFR2______	-1.19	544223	455742	secretion	unknown
YER004W	__________	+1.18	862099	1015519	unknown	unknown
YGR101W	__________	+1.01	191088	193209	unknown	unknown
YHR115C	__________	+1.01	565005	569696	unknown	unknown
YJR147W	HMS2______	-1.67	326799	195742	pseudohyphal growth	transcription factor
YLR294C	__________	+1.61	552068	889560	unknown	unknown
YNL080C	__________	+1.13	308465	347965	unknown	unknown
YOR198C	BFR1______	+1.17	1296231	1514872	secretion	unknown
YPL178W	CBC2______	-1.02	1013583	992728	meiosis, recombination	nuclear cap-binding protein complex small subunit
YAR047C	__________	+1.01	112426	112997	unknown	unknown
YBR261C	__________	-1.45	483431	334510	unknown	unknown
YDR130C	FIN1______	-1.06	226600	213473	cell cycle (putative)	intermediate filament protein
YDR499W	LCD1______	-1.06	199066	188488	unknown	unknown
YER185W	__________	+1.10	126816	139867	unknown	unknown; similar to Rtm1p
YGL192W	IME4______	-1.01	144873	143539	meiosis	transcription factor
YIL091C	__________	-1.19	514289	431499	unknown	unknown
YJL193W	__________	-1.16	272938	236120	unknown	unknown; similar to Sly41p and to triose
YKL189W	HYM1______	-1.05	208095	198974	unknown	unknown; similar to Aspergillus nidulans hymA which is
YLR123C	__________	-1.01	104113	102832	unknown	unknown; similar to class I family of aminoacyl-tRNA
YMR224C	MRE11_____	+1.08	167269	181343	meiosis, recombination	ds break formation complex subunit
YNL284C	MRPL10____	+1.08	469875	507932	protein synthesis	ribosomal protein, mitochondrial L10
YOR022C	__________	+1.10	146185	160435	unknown	unknown
YPR095C	SYT1______	+1.24	111409	138041	unknown	unknown; similar to S. typhimurium T1pA alpha-helical
YBR073W	RDH54_____	-1.07	357780	334800	meiosis	helicase
YCR011C	ADP1______	+1.18	317403	375866	transport	(putative) ATP-dependent permease
YDL190C	UFD2______	+1.03	251201	258440	protein degradation, ubiquitin-mediated	unknown; may influence multi-Ub chain topology
YDR311W	TFB1______	-1.21	254553	210962	transcription	TFIIH 75 kD subunit
YER014W	HEM14_____	+1.33	175075	232112	heme biosynthesis	protoporphyrinogen oxidase
YGR111W	__________	+1.11	398483	442957	unknown	unknown; similar to southern house mosquito carboxylesterase
YHR127W	HSN1______	-1.10	631083	573962	unknown	suppresses SEC4 dominant negative mutant
YJR159W	SOR1______	+1.15	200286	229834	sorbitol metabolism	sorbitol dehydrogenase
YLR306W	UBC12_____	+1.00	145409	146087	protein degradation, ubiquitin-mediated	E2 ub.-conjugating enzyme
YNL092W	__________	+1.09	123222	134028	unknown	unknown
YOR210W	RPB10_____	-1.23	824230	668603	transcription	shared subunit of RNA polymerases I, II, and III
YPL189W	GUP2______	-1.02	121610	119081	glycerol utilization	glycerol transporter (putative)
YBL010C	__________	+1.01	218235	220330	unknown	unknown
YBR273C	__________	-1.11	363038	325740	unknown	unknown
YDL012C	__________	-1.13	320333	283211	unknown	unknown
YDR142C	PEX7______	+1.05	182007	190726	peroxisome biogenesis	import receptor
YDR511W	__________	-1.02	235174	231357	unknown	unknown
YFL010W	AUA1______	+1.47	929486	1369197	amino acid uptake	ammonia regulation of GAP1 activity
YGL204C	__________	-1.47	358003	243029	unknown	unknown
YIL102C	__________	-1.12	122840	110034	unknown	unknown
YJL205C	NCE101____	-1.09	214978	197625	secretion, non-classical	unknown
YKL201C	MNN4______	-1.03	100016	97494	protein glycosylation	phosphatidylinositol kinase homolg
YLR135W	__________	-1.02	124436	122500	unknown	unknown
YML010W	SPT5______	-1.20	387466	324051	transcription	elongation factor
YMR237W	__________	+1.07	384026	410177	unknown	unknown; similar to Chs6p/Csd3p
YNL294C	__________	+1.42	293121	416368	unknown	unknown
YOR034C	AKR2______	-1.24	220374	177945	endocytosis of Ste3p	unknown
YPL012W	__________	-1.38	1209694	876552	unknown	unknown
YPR107C	YTH1______	+1.03	294715	302737	mRNA 3'-end processing	cleavage/polyadenylation specificity factor subunit
YBR084W	MIS1______	-1.63	786735	482402	folate metabolism	C1-tetrahydrofolate synthase
YCR022C	__________	+1.01	133676	134761	unknown	unknown
YDL202W	MRPL11____	-1.07	203985	190425	protein synthesis	ribosomal protein, mitochondrial L11
YDR321W	ASP1______	-1.46	1423615	972943	asparagine utilization	L-asparaginase I
YER024W	__________	-1.09	210977	193073	unknown	unknown; similar to Yat1p
YGL012W	ERG4______	+1.35	1039811	1401730	sterol metabolism	sterol C-24 reductase
YGR123C	PPT1______	-1.68	636126	377617	unknown	protein phosphatase
YHR138C	__________	+1.88	207102	388574	unknown	unknown
YJL012C	PHM3______	-1.13	700916	620335	phosphate metabolism (putative)	polyphosphate synthetase (putative)
YKL011C	CCE1______	-1.12	218460	194254	tRNA processing	cruciform cutting endonuclease
YLL012W	__________	-1.11	417869	375840	unknown	unknown; similar to human triacylglycerol lipase
YLR317W	__________	-1.02	120839	117924	unknown	unknown
YMR054W	STV1______	+1.12	209682	235132	vacuolar acidification	vacuolar H+-ATPase V0 domain 102 KD subunit
YNL104C	LEU4______	+1.05	812008	849509	leucine biosynthesis	2-isopropylmalalate synthase
YOL012C	HTA3______	+1.07	820166	873686	chromatin structure	histone-related
YOR222W	ODC2______	+1.33	303601	402848	unknown	unknown; similar to mitochondrial ADP/ATP carrier proteins
YPL201C	__________	-1.04	135847	130512	unknown	unknown
YAR071W	PHO11_____	+1.54	1242491	1917917	phosphate metabolism	secreted acid phosphatase
YBL022C	PIM1______	-1.12	274426	245136	respiration	mitochondrial ATP-dependent protease
YBR285W	__________	+1.11	100029	111114	unknown	unknown
YDL024C	DIA3______	+1.17	112026	130538	pseudohyphal growth (putative)	unknown
YDR154C	__________	+1.54	5551932	8573608	unknown	unknown
YDR523C	SPS1______	+1.17	154915	180619	meiosis	protein kinase
YFL018C	LPD1______	-1.21	226787	187358	TCA cycle	dihydrolipoamide dehydrogenase
YGL216W	KIP3______	-1.05	152536	145511	mitosis	kinesin related protein
YHL020C	OPI1______	+1.13	1031241	1165278	phospholipid metabolism	negative regulator of phospholipid biosynthesis
YIL114C	POR2______	-1.11	167475	150726	mitochondrial transport	porin, anion channel
YJL217W	__________	+1.12	1564244	1745948	unknown	unknown
YKL213C	DOA1______	+1.16	345711	402020	protein degradation, ubiquitin-mediated	unknown
YLR147C	SMD3______	-1.11	255334	231037	mRNA splicing	core snRNP protein
YML021C	UNG1______	-1.14	351361	307061	DNA repair	uracil DNA glycosylase
YMR250W	GAD1______	+1.53	152334	233530	glutamate metabolism	glutamate decarboxylase
YNL306W	__________	-1.05	243873	233062	protein synthesis	ribosomal protein, mitochondrial small subunit
YOR046C	DBP5______	-1.20	1547153	1285855	mRNA export	RNA helicase
YPL024W	NCE4______	+1.12	290695	324390	cell separation	negative regulator of CTS1 expression
YPR119W	CLB2______	+1.09	222883	242178	cell cycle	G2/M cyclin
YBR095C	__________	+1.08	208287	225738	unknown	unknown; similar to Drosophila cyclin B
YCR032W	BPH1______	+1.18	280540	329798	transport	acetic acid export pump (putative)
YDL214C	__________	+1.04	97660	101912	unknown	protein kinase
YDR333C	__________	-1.12	327814	292989	unknown	unknown
YER036C	__________	-1.39	960596	690362	unknown	unknown; similar to members of the ATP-binding cassette
YGL024W	__________	-1.08	114735	105938	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YGR135W	PRE9______	+1.14	1213275	1384851	protein degradation	20S proteasome subunit Y13 (alpha3)
YHR148W	IMP3______	-1.53	533397	349713	rRNA processing	U3 snoRNP protein
YJL024C	APS3______	-1.37	289818	211204	vacuolar protein targeting	AP-3 complex subunit
YKL023W	__________	-1.03	269874	262105	unknown	unknown
YLL024C	SSA2______	-1.19	3096642	2607353	ER and mitochondrial translocation	cytosolic HSP70
YLR329W	REC102____	-1.15	139524	121685	meiosis, recombination	ds break formation complex subunit
YMR066W	SOV1______	+1.07	134921	145028	respiration (putative)	unknown; synthesis of Var
YNL116W	__________	-1.31	581715	443189	unknown	unknown
YOL024W	__________	-1.15	153245	133787	unknown	unknown
YOR234C	RPL33B____	-1.28	7188844	5598217	protein synthesis	ribosomal protein L33B
YPL213W	LEA1______	-1.17	375293	319730	mRNA splicing	U2 snRNP protein
YBL034C	STU1______	-1.16	152517	131427	mitosis	spindle component
YBR297W	MAL33_____	-1.11	149291	134313	maltose metabolism	regulator of maltose metabolic genes
YDL036C	__________	-1.51	289474	191713	unknown	unknown; similar to Rib2p
YDR166C	SEC5______	+1.08	89869	96870	secretion	exocyst complex subunit
YDR535C	__________	-1.02	101108	98680	unknown	unknown
YFL029C	CAK1______	+1.11	266472	294616	cell cycle	protein kinase
YGL227W	VID30_____	-1.02	650067	635296	vacuolar protein targeting (putative)	unknown; TOR inhibitor
YHL031C	GOS1______	-1.15	337584	294005	secretion	Golgi SNARE
YIL126W	STH1______	-1.05	99615	95307	chromatin structure	chromatin remodeling complex subunit
YJR005W	APL1______	-1.16	225318	194853	secretion	vesicle coat component
YKL225W	__________	-1.02	94743	92998	unknown	unknown
YML032C	RAD52_____	+1.01	245351	248452	DNA repair and recombination	Rad51p cofactor
YMR261C	TPS3______	+1.28	304668	390468	trehalose utilization	alpha,alpha-trehalose-phosphate synthase
YNL318C	HXT14_____	-1.07	112410	104885	transport	hexose permease
YOR058C	ASE1______	-1.10	286279	260090	mitosis	spindle midzone component
YPL036W	PMA2______	-1.40	448089	319676	H+ homeostasis	plasma membrane H+-ATPase
YPR131C	NAT3______	+1.02	330270	337813	protein processing	protein N-acetyltransferase
YBR107C	IML3______	+1.14	165123	187879	mitosis, chromosome segregation (putative)	unknown
YCR044C	PER1______	-1.05	339314	324314	protein processing (putative)	unknown
YDL226C	GCS1______	-1.16	710638	613630	secretion	vesicle transport; GAP for ARF
YDR345C	HXT3______	+1.21	3868216	4668595	transport	hexose permease
YER046W	__________	+1.09	239761	260617	unknown	unknown
YGL036W	MTC2______	+1.04	675920	705354	unknown	unknown
YGR147C	NAT2______	+1.06	242873	258473	protein processing	N-acetyltransferase for N-terminal methionine
YHR160C	PEX18_____	+1.10	140340	154062	peroxisome biogenesis (putative)	unknown, "peroxin"
YJL036W	SNX4______	+1.11	233472	258687	protein targeting (putative)	unknown; similar to human sorting nexins
YKL034W	__________	+1.12	193170	216094	unknown	unknown
YLL036C	PRP19_____	-1.21	282160	232442	mRNA splicing; DNA repair	non-snRNP spliceosome component
YLR341W	__________	+1.02	118101	120585	unknown	unknown
YMR077C	__________	-1.20	257555	214241	unknown	unknown; similar to Snf7p
YNL128W	TEP1______	-1.12	217106	193641	unknown	protein phosphatase
YOL036W	__________	-1.10	388760	352531	unknown	unknown
YOR246C	__________	-1.16	583782	503027	unknown	unknown
YPL225W	__________	+1.11	1427346	1584260	unknown	unknown
YBL046W	__________	-1.19	242333	203759	unknown	unknown
YDL048C	STP4______	+2.05	281274	575703	tRNA splicing	unknown
YDR176W	NGG1______	+1.08	151449	162905	chromatin structure	histone acetyltransferase complex subunit
YFL039C	ACT1______	+1.18	5514431	6487439	cytoskeleton	actin
YGL239C	__________	+1.02	175550	178391	unknown	unknown
YHL043W	ECM34_____	-1.15	160369	139503	cell wall biogenesis	unknown
YIL138C	TPM2______	+1.07	313618	336298	cytoskeleton	tropomyosin
YJR016C	ILV3______	-1.87	1243254	663644	isoleucine and valine biosynthesis	dihydroxyacid dehydratase
YKR012C	__________	-1.24	196352	158816	unknown	unknown
YLR169W	__________	+1.08	87987	94860	unknown	unknown
YML042W	CAT2______	-1.00	121688	121144	fatty acid transport	carnitine O-acetyltransferase
YNL330C	RPD3______	-1.20	526925	439306	chromatin structure	histone deacetylase
YOR070C	GYP1______	+1.01	132153	134112	signaling	GTPase-activating protein for Ypt1p
YPL048W	CAM1______	-1.24	2520357	2040318	protein synthesis	translation elongation factor EF-1gamma
YPR141C	KAR3______	-1.12	373011	333653	mating; nuclear fusion; mitosis	kinesin-like protein
YBR118W	TEF2______	+1.33	15752962	20981728	protein synthesis	translation elongation factor EF-1 alpha
YCR056W	__________	-1.20	1275171	1062887
YDL238C	__________	-1.03	1484209	1443959	unknown	unknown
YDR357C	__________	-1.18	697356	590275	unknown	unknown
YER056C	RPL34A____	-1.10	1564408	1421164	protein synthesis	ribosomal protein L34A
YGL048C	RPT6______	-1.05	699172	667547	protein degradation	26S proteasome regulatory subunit
YGR159C	NSR1______	-1.49	2926835	1967226	nuclear protein targeting	NLS-binding protein
YHR172W	SPC97_____	-1.24	228131	184133	cytoskeleton	spindle pole body component
YJL049W	__________	-1.14	332810	290680	unknown	unknown
YKL046C	__________	+1.07	500785	536911	unknown	unknown
YLL048C	YBT1______	+1.03	139693	143919	transport	bile acid transporter of ABC family
YLR353W	BUD8______	-1.15	122632	106671	bud site selection, bipolar	unknown
YMR088C	__________	+1.03	294791	304824	unknown	unknown
YNL140C	__________	+1.01	330063	331936	unknown	unknown
YOL048C	__________	+1.69	179197	302863	unknown	unknown
YOR258W	__________	+1.07	218820	233474	unknown	unknown
YPL237W	SUI3______	-1.35	1219984	900477	protein synthesis	translation initiation factor eIF2 beta subunit
YBL058W	SHP1______	-1.05	462128	438525	glucose repression	(putative) Glc7p regulatory subunit
YDL060W	__________	-1.33	190497	142786	unknown	unknown
YDR187C	__________	-1.75	181369	103717	unknown	unknown
YFL051C	__________	-1.02	104004	101818	unknown	unknown; similar to Flo1p family of proteins
YGL251C	HFM1______	-1.41	212422	151098	unknown	DNA/RNA helicase, putative
YHR003C	__________	-2.81	738199	262893	unknown	unknown; similar to Ykl027p and weak similarity to E.
YIL150C	DNA43_____	-2.00	341813	171120	DNA replication	unknown
YJR027W	__________	-1.08	15958128	14740303	unknown	unknown; similar to E. coli molybdopterin-converting factor
YKR024C	DBP7______	-2.52	1519725	602571	ribosome biogenesis	putative RNA helicase
YLR181C	__________	-1.16	523652	451183	unknown	unknown
YMR285C	__________	-1.12	396542	355613	unknown	unknown
YNR003C	RPC34_____	-1.56	395899	254566	transcription	RNA polymerase III 34 kD subunit
YOR082C	__________	-2.27	329327	144777	unknown	unknown
YPR153W	__________	-1.16	120148	103991	unknown	unknown
YBR130C	SHE3______	-1.16	270358	233107	cell polarity	asymmetric HO expression
YCR068W	__________	-1.05	117449	111501	unknown	unknown
YDR002W	YRB1______	+1.03	3130360	3234027	nuclear protein targeting	GTPase-activating protein for Ran
YDR367W	__________	-1.04	387159	371424	unknown	unknown
YGL060W	__________	-1.22	239546	196709	unknown	unknown
YGR167W	CLC1______	+1.21	1598950	1934043	endocytosis and secretion	clathrin light chain
YHR184W	SSP1______	-1.24	313464	252757	meiosis,nuclear division and spore formation	unknown
YJL061W	NUP82_____	-1.42	586177	412539	nuclear protein targeting	nuclear pore protein
YKL058W	TOA2______	+1.18	506874	599575	transcription	TFIIA 13.5 kD subunit

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YLL060C	GTT2______	-1.24	295465	238123	glutathione metabolism	glutathione transferase
YLR365W	__________	-1.09	114562	105383	unknown	unknown
YMR100W	MUB1______	-1.04	246411	237653	bud site selection	unknown
YNL152W	__________	-1.13	280980	248963	unknown	unknown
YOL058W	ARG1______	+2.71	399314	1083013	arginine biosynthesis	arginosuccinate synthetase
YOR270C	VPH1______	+1.17	1991509	2336177	vacuolar acidification	vacuolar H+-ATPase 95 kD subunit
YPL249C	__________	-1.02	143596	141232	unknown	unknown
YBL070C	__________	+1.15	87714	101190	unknown	unknown
YDL072C	__________	+2.13	646705	1375573	unknown	unknown
YDR199W	__________	+1.17	193577	225645	unknown	unknown
YFL063W	__________	+1.05	121643	128290	unknown	unknown; similar to Gin11p and Ykl225p
YGL263W	COS12_____	-1.65	158372	95991	unknown	unknown; similar to subtelomerically-encoded proteins
YHR014W	SPO13_____	-1.11	122665	110310	meiosis	negative regulator of M phase (putative)
YIL161W	__________	-1.02	305921	300010	unknown	unknown
YJR039W	__________	+1.06	164628	175209	unknown	unknown; similar to Paramecium tetraurelia NADH
YKR036C	CAF4______	+1.04	256678	266369	catabolite repression	component of CCR4 transcriptional complex
YLR193C	__________	+1.04	289602	300923	unknown	unknown; similar to Msf1p
YML063W	RPS1B_____	+1.38	15410630	21190605	protein synthesis	ribosomal protein S1B
YMR295C	__________	+1.65	1161470	1921914	unknown	unknown
YNR015W	SMM1______	-1.61	652552	404672	protein synthesis, mitochondrial (putative)	unknown
YOR094W	ARF3______	+1.05	469899	491916	secretion	GTP-binding ADP-ribosylation factor
YPL070W	__________	+1.25	396806	496574	unknown	unknown
YPR161C	SGV1______	-1.11	451763	407918	cell cycle	protein kinase
YBR142W	MAK5______	-1.62	272197	167730	mRNA splicing	RNA helicase
YCR080W	__________	+1.01	87750	88895
YDR014W	__________	-1.02	106576	104144	unknown	unknown
YDR379W	RGA2______	+1.06	113313	120255	signaling	Rho-GTPase activating protein
YER076C	__________	-1.00	127441	127143	unknown	unknown; similar to KHR1 killer toxin
YGL072C	__________	+1.13	238492	269484	unknown	unknown
YGR179C	__________	+1.02	262428	268981	unknown	unknown; similar to chicken myosin heavy chain, cardiac
YHR196W	__________	-1.20	729297	606881	unknown	unknown
YJL073W	JEM1______	+1.02	375992	383203	mating; nuclear fusion	DnaJ-like protein
YKL070W	__________	+1.01	121364	122386	unknown	unknown; similar to Bacillus subtilis transcriptional
YLR005W	SSL1______	-1.03	446954	433044	transcription	TFIIH subunit
YLR377C	FBP1______	-1.05	144887	137475	gluconeogenesis	fructose-1,6-bisphosphatase
YMR112C	MED11_____	+1.02	273017	278236	transcription	RNA polymerase II mediator subunit
YNL164C	__________	-1.07	276607	258559	unknown	unknown
YOL070C	__________	+1.04	484412	502737	unknown	unknown
YOR282W	__________	-1.20	184301	154199	unknown	unknown
YPL258C	THI21_____	+1.02	174936	177786	thiamine metabolism (putative)	unknown
YBL082C	RHK1______	-1.32	465108	353649	protein glycosylation	Dol-P-Man dependent alpha-1,3- mannosyltransferase (putative)
YDL084W	SUB2______	+1.01	3193468	3217544	mRNA splicing	RNA helicase
YFR007W	__________	-1.09	121268	111514	unknown	unknown
YGR012W	__________	-1.11	500946	450703	unknown	unknown; similar to Cys4p
YHR025W	THR1______	-1.35	1424366	1055431	threonine biosynthesis	homoserine kinase
YIL172C	__________	-1.03	206598	201366	unknown	unknown; similar to alpha-D-glucosidase (maltase)
YJR051W	OSM1______	+1.07	423710	455090	anaerobic growth (putative)	fumarate reductase
YKR048C	NAP1______	-1.07	1003273	933572	chromatin structure	nucleosome assembly protein
YLR205C	__________	-1.24	222155	178513	unknown	unknown
YML075C	HMG1______	-2.08	1520788	731508	sterol metabolism	3-hydroxy-3-methylglutaryl-coenzyme A reductase
YMR306W	FKS3______	-1.27	347966	273501	unknown	unknown; similar to Gls1p and Gls2p
YNR027W	__________	-1.00	269214	268615	unknown	unknown
YOR106W	VAM3______	-1.05	396530	378461	vacuole biogenesis	t-SNARE
YPL082C	MOT1______	-1.47	330345	225419	transcription	putative helicase
YPR173C	VPS4______	+1.07	859034	915317	vacuolar protein targeting	AAA ATPase family
YBR154C	RPB5______	-1.39	1046458	753466	transcription	shared subunit of RNA polymerases I, II, and III
YCR091W	KIN82_____	+1.03	127618	131326	unknown	protein kinase
YDR026C	__________	-1.08	154096	143207	unknown	unknown; similar to Reb1p
YDR391C	__________	+1.33	217502	290290	unknown	unknown
YER087W	__________	-1.01	161542	160497	unknown	unknown; similar to E. coli prolyl-tRNA synthetase
YGL084C	GUP1______	+1.04	270174	279987	glycerol utilization	glycerol transporter (putative)
YGR191W	HIP1______	-1.15	642261	559764	transport	histidine permease
YHR208W	BAT1______	-1.39	1540986	1106003	branched chain amino acid degradation	transaminase
YJL085W	EXO70_____	-1.19	367193	308918	secretion	exocyst complex subunit
YKL082C	__________	-1.28	1123914	874905	unknown	unknown
YLR017W	MEU1______	-1.37	819950	600663	glucose derepression	regulator of ADH2 expression
YLR389C	STE23_____	+1.02	253995	258105	mating	a-factor processing protease (putative)
YMR123W	PKR1______	-1.35	657107	486064	killer toxin sensitivity (Pichia farinosa toxin)	unknown
YNL176C	__________	+1.27	240479	306052	unknown	unknown
YOL082W	__________	+1.80	215945	387701	unknown	unknown
YOR294W	RRS1______	-1.50	1112624	740893	ribosome biogenesis (putative)	unknown
YPL270W	MDL2______	+1.18	310170	367165	transport	ATP-binding cassette (ABC) family
YBL094C	__________	+1.12	217496	243786	unknown	unknown; similar to Neurospora crassa chitin synthase
YDL096C	__________	-1.26	122460	96930	unknown	unknown
YDR219C	__________	+1.06	212500	225705	unknown	unknown
YFR019W	FAB1______	+1.00	101964	102426	mitosis	putative PIP 5-kinase
YGR024C	__________	+1.01	625632	632597	unknown	unknown
YHR037W	PUT2______	-1.14	192483	169260	amino acid biosynthesis	delta-1-pyrroline-5-carboxylate dehydrogenase
YIR007W	__________	+1.01	165204	167089	unknown	unknown; similar to endoglucanase
YJR063W	RPA12_____	-1.24	864632	694602	transcription	RNA polymerase I subunit
YKR060W	__________	-1.37	502770	366419	unknown	unknown
YLR217W	__________	+1.00	176447	177117	unknown	unknown
YML087C	__________	+1.18	224933	265791	unknown	unknown
YNR039C	ZRG17_____	+1.01	334044	338204	unknown	unknown; similar to Anopheles mitochondrial NADH
YOR118W	__________	-1.05	116238	110306	unknown	unknown
YPL094C	SEC62_____	-1.16	1313591	1131356	secretion	ER protein translocation subcomplex subunit
YPR185W	APG13_____	+1.38	1080672	1492778	autophagy	unknown
YBR165W	UBS1______	+1.13	120819	136340	protein degradation, ubiquitin-mediated	regulates Cdc34p (ubiquitin-conjugating enzyme)
YCR102C	__________	+1.10	125531	138022	unknown	unknown; similar to Bacillus subtilis sorbitol
YDR036C	__________	-1.09	209379	192389	unknown	unknown; similar to enoyl CoA hydratase
YDR403W	DIT1______	+1.14	113768	129350	sporulation, spore wall biogenesis	synthesizes dityrosine precursor
YER098W	UBP9______	+1.13	153869	173947	protein degradation, ubiquitin-mediated	ubiquitin C-terminal hydrolase
YGL096W	__________	+1.08	102551	111205	unknown	unknown; similar to Cup9p
YGR203W	__________	-1.36	671971	494121	unknown	unknown
YHR217C	__________	-1.15	655202	568432	unknown	unknown
YJL097W	__________	-1.08	843175	779767	unknown	unknown
YKL094W	YJU3______	+1.23	566268	694428	unknown	unknown; similar to E.coli hypothetical protein
YLR029C	RPL15A____	+1.15	15807570	18214231	protein synthesis	ribosomal protein L15A
YLR401C	__________	-1.50	422638	281199	unknown	unknown; similar to R. capsulatus protein nifR3
YMR135C	__________	-1.05	304950	290714	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta kre6	wt, strain AR27	delta kre6


YNL188W	KAR1______	+1.03	346466	356586	cytoskeleton	nuclear fusion; also spindle
YOL094C	RFC4______	-1.13	553758	491604	DNA replication	replication factor C, 37 kDa subunit
YPL282C	__________	-1.03	97381	94842	unknown	unknown; similar to other subtelomerically-encoded proteins