del_gas1

25-Sep-2001 by nhauser
multiconditional experiment no. (if not recombined): 2
hybridisations (conditions & MCE(s) marked by brackets): {{10,11,12,13},{14,15,16,17}}
normalization method [parameters]: log. reg. 2
intensity threshold: 380000

			factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
			condition1	condition0(CONTROL)	condition1	functional category	description
			delta_gas1	wt, strain W303	delta_gas1


*	YAL001C	TFC3______	-1.17	54291	46410	transcription	TFIIIC 138 kD subunit
	YBR166C	TYR1______	+1.04	366564	380974	tyrosine biosynthesis	prephenate dehydrogenase (NADP+
	YCR102W	__________	+1.78	88132	156675	unknown	unknown
	YDR037W	KRS1______	+1.20	2043169	2448827	protein synthesis	tRNA synthetase, lysyl
	YDR404C	RPB7______	-1.37	307954	225131	transcription	RNA polymerase II 19 kD subunit
	YER099C	PRS2______	-1.11	369696	332335	purine biosynthesis	ribose-phosphate pyrophosphokinase
	YGL097W	SRM1______	-1.13	500896	442424	nuclear targeting; mating	GDP/GTP exchange factor for Gsp1p/Gsp2p
	YGR204W	ADE3______	+1.71	352476	604484	purine biosynthesis	C1-5,6,7,8-tetrahydrofolate synthase
	YIL001W	__________	+1.32	94281	124527	unknown	unknown
	YJL098W	SAP185____	+1.22	172901	211779	cell cycle	Sit4p-associated protein
	YKL095W	YJU2______	+1.47	52748	77774	unknown	unknown
	YLR030W	__________	+1.18	52206	61764	unknown	unknown
	YLR402W	__________	-1.17	44205	37723	unknown	unknown
	YNL189W	SRP1______	-1.13	1030275	908512	nuclear protein targeting	alpha-karyopherin
	YOL095C	HMI1______	+1.00	97005	97162	unknown	mitochondrial DNA helicase (putative)
	YOR305W	__________	-1.00	378967	377349	unknown	unknown
	YPL283C	YRF1-7____	-1.11	72538	65108	unknown	Y' helicase (subtelomerically-encoded)
	YBL095W	__________	+1.46	122837	179030	unknown	unknown
	YCL001W	RER1______	+1.03	57496	59119	secretion; protein targeting	ER protein retention (Golgi membrane protein)
	YDL097C	RPN6______	+1.11	915690	1012483	protein degradation	26S proteasome regulatory subunit
	YDR220C	__________	-1.75	87238	49962	unknown	unknown
	YEL001C	__________	-1.21	580248	479923	unknown	unknown
	YFR020W	__________	-1.29	149026	115339	unknown	unknown
	YGR025W	__________	-1.32	50260	38162	unknown	unknown
	YHR038W	FIL1______	-1.16	129858	112224	protein syntehsis	robosomal protein, mitochondrial (putative)
	YIR008C	PRI1______	-1.66	218071	131320	DNA replication	DNA primase subunit
	YJR064W	CCT5______	+1.10	806880	890458	protein targeting	cytoplasmic chaperonin complex
	YKR061W	KTR2______	+1.91	301680	574993	protein glycosylation	putative mannosyltransferase; type 2 membrane protein
	YLR218C	__________	-2.11	70199	33328	unknown	unknown
	YML088W	__________	+1.46	285325	415364	unknown	unknown
	YNL001W	DOM34_____	-1.28	357321	279730	protein synthesis (putative)	unknown
	YNR040W	__________	-1.36	48030	35303	unknown	unknown; zinc regulated
	YOR119C	RIO1______	-1.13	263905	233452	unknown	unknown; similar to a C.elegans ZK632.3 protein
	YPL095C	__________	+1.20	129453	154992	unknown	unknown; similar to Ybr177p
	YPR186C	PZF1______	-1.01	242108	239883	transcription	TFIIIA
	YAL014C	__________	-1.22	252209	206842	unknown	unknown
	YBR178W	__________	+1.07	53377	57241	unknown	unknown
	YCRX08W	__________	+1.00	78068	78272
	YDR049W	__________	+1.09	122530	133709	unknown	unknown
	YDR416W	SYF1______	-1.01	118501	117269	cell cycle (putative)	unknown; synthetic lethal with cdc40
	YER111C	SWI4______	-1.04	174702	168003	cell cycle	transcription factor
	YGL109W	__________	-1.09	167690	153807	unknown	unknown
	YGR216C	GPI1______	+1.10	143230	156888	protein processing	N-acetylglucosaminylphosphatidylinositol synthesis
	YIL013C	PDR11_____	+1.02	55259	56177	transport	ATP-binding cassette (ABC) family
	YJL110C	GZF3______	-1.03	251041	242553	nitrogen catabolism	transcription factor
	YKL106W	AAT1______	-1.37	281090	205902	aspartate metabolism?	aspartate aminotransferase,
	YLR040C	__________	-1.02	833456	816642	unknown	unknown
	YLR412W	__________	-1.34	302548	226187	unknown	unknown
	YMR147W	__________	+1.65	82071	135109	unknown	unknown
	YNL201C	__________	-1.14	55876	49208	unknown	unknown
	YOL105C	WSC3______	+1.31	213291	280357	signaling	stress response
	YOR317W	FAA1______	+1.76	598448	1054323	fatty acid metabolism	long chain fatty acyl:CoA synthetase
	YPR012W	__________	+1.14	460977	523259	unknown	unknown
	YBL105C	PKC1______	+1.04	107250	111928	cell wall biogenesis	protein kinase C
	YCL012W	__________	+1.01	137055	138089	unknown	unknown
	YDL109C	__________	+1.42	62422	88751	unknown	unknown
	YDR232W	HEM1______	+1.37	231367	316814	heme biosynthesis	5-aminolevulinate synthase
	YEL013W	VAC8______	+1.30	222294	288478	vacuolar protein targeting	vacuolar protein
	YFR031C	RPL2A_____	+1.42	59843	84966	protein synthesis	ribosomal protein L2A
	YGR035C	__________	+1.19	44695	53256	unknown	unknown
	YHR049W	__________	-1.88	669529	355526	unknown	unknown
	YIR019C	MUC1______	+1.32	56277	74456	flocculation and invasive growth	unknown
	YJR076C	CDC11_____	+1.38	483297	666645	cytokinesis	septin
	YKR073C	__________	+1.62	50829	82481	unknown	unknown
	YLR228C	ECM22_____	+1.62	90141	146224	unknown	unknown; similar to transcription factors, has Zn[2]-Cys[6]
	YML099C	ARG81_____	+1.36	98343	133835	arginine metabolism	transcription factor
	YNL013C	__________	-1.19	265391	222737	unknown	unknown
	YNR052C	POP2______	+1.02	653873	668499	glucose derepression	component of CCR4 complex
	YOR131C	__________	+1.01	270956	274339	unknown	unknown; similar to E. coli protein yhfE gene of the dam
	YPL107W	__________	+1.68	203373	342617	unknown	unknown
	YPR198W	SGE1______	+2.17	279124	606147	crystal violet resistance	transporter, major facilitator superfamily
	YAL026C	DRS2______	+1.18	142056	167607	transport	Ca(2+) transporting ATPase
	YBR190W	__________	-1.46	106261	72603	unknown	unknown; similar to glycosyl hydrolases
	YCRX20C	__________	+1.20	62576	75172
	YDR061W	__________	-1.23	244277	198970	unknown	unknown; similar to E. coli photorepair protein
	YDR428C	__________	-1.19	171397	144072	unknown	unknown
	YER122C	GLO3______	+1.07	484035	516963	cell proliferation	unknown
	YGL121C	__________	+3.86	133603	515229	unknown	unknown
	YGR228W	__________	+1.20	392958	471709	unknown	unknown
	YIL024C	__________	+1.67	109290	182059	unknown	unknown
	YJL122W	__________	-1.16	626683	540099	unknown	unknown
	YKL118W	__________	+1.95	55440	107902	unknown	unknown
	YLR052W	__________	-1.15	216709	188081	unknown	unknown
	YLR424W	__________	-1.04	116886	112923	unknown	unknown; similar to retrovirus-related protease
	YMR158W	__________	-1.08	162206	149989	unknown	unknown; similar E. coli ribosomal protein S8
	YNL213C	__________	-1.16	167731	145097	unknown	unknown
	YOL117W	__________	+1.15	88867	102149	unknown	unknown
	YOR329C	SCD5______	+1.77	199441	353973	secretion	suppressor of clathrin deficiency
	YPR024W	YME1______	+1.52	211508	320658	mitochondrial protein processing	AAA family protease
	YBR004C	__________	+1.74	168046	291812	unknown	expressed during sporulation
	YCL025C	AGP1______	-1.27	344738	271435	transport	amino acid permease
	YDL121C	__________	-1.62	442898	274172	unknown	unknown
	YEL024W	RIP1______	+1.80	576192	1037516	respiration	ubiquinol cyt.-c reductase iron-sulfur protein
	YFR041C	__________	-1.02	239875	234659	unknown	unknown; similar to dnaJ proteins Sis1p, Mdj1p, and Scj1p
	YGR042W	__________	+1.11	172704	191522	unknown	unknown
	YHR059W	__________	-1.15	182222	158164	unknown	unknown
	YIR029W	DAL2______	+1.32	117351	155252	allantoin utilization	allantoicase
	YJR089W	BIR1______	+1.46	103371	150631	unknown	unknown
	YKR085C	MRPL20____	-1.31	241168	184781	protein synthesis	ribosomal protein, mitochondrial L20
	YLR240W	VPS34_____	+2.23	52625	117414	vacuolar protein targeting	phosphatidylinositol 3-kinase

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YML109W	ZDS2______	+1.70	153483	260796	cell cycle	Zds1 homolog
YNL025C	SSN8______	+1.09	92014	100102	transcription	RNA polymerase II mediator subunit
YNR064C	__________	+2.07	103810	215273	unknown	unknown; similar to Rhodobacter capsulatus bchO
YPL119C	DBP1______	+1.43	75352	107757	mRNA processing	RNA helicase
YAL035W	FUN12_____	+1.26	732328	920840	unknown	unknown; similar to Bacillus subtilis IF2
YBR202W	CDC47_____	-1.27	257071	202467	DNA replication	MCM initiator complex
YDR073W	SNF11_____	-1.07	192842	180591	transcription	component of SWI/SNF global activator complex
YDR440W	DOT1______	-1.18	118714	100524	meiosis, checkpoint; transcriptional silencing	unknown
YER134C	__________	-1.25	45506	36395	unknown	unknown
YGL133W	ITC1______	+1.62	85841	138718	chromatin structure	chromatin remodeling complex subunit
YGR240C	PFK1______	+1.13	114533	129104	glycolysis	phosphofructokinase
YIL036W	CST6______	+1.17	223372	260913	chromosome stability	unknown; similar to Mei4p and to cAMP response element
YJL134W	LCB3______	+1.16	317611	367007	sphingolipid metabolism	sphingoid base-phosphate phosphatase
YKL130C	SHE2______	-1.09	178056	163206	cell polarity	asymmetric HO expression
YLR064W	__________	+1.04	321685	334276	unknown	unknown
YLR434C	__________	-1.59	129967	81778	unknown	unknown
YNL225C	CNM67_____	+1.10	86363	95201	cytoskeleton	spindle pole body component
YOL129W	__________	+1.26	310005	390363	unknown	unknown
YOR341W	RPA190____	+1.28	1161436	1481531	transcription	RNA polymerase I 190 kD subunit
YPR036W	VMA13_____	+1.01	1636088	1648137	vacuolar acidification	vacuolar H+-ATPase V1 domain 54 KD subunit
YBR014C	__________	-1.29	208992	162561	unknown	unknown; similar to glutaredoxin
YCL037C	SRO9______	+1.05	64739	67828	cytoskeleton	actin filament organization
YDL132W	CDC53_____	-1.12	200486	179797	cell cycle	G1 cyclin degradation
YDR256C	CTA1______	+1.30	81357	106118	oxidative stress response	catalase A
YEL036C	ANP1______	-1.32	756534	574401	protein glycosylation	mannosyltransferase complex subunit
YFR053C	HXK1______	+1.03	420466	433787	glycolysis	hexokinase I
YGR054W	__________	-1.12	227443	203572	unknown	unknown; similar to C. elegans C14B9.6 protein
YHR070W	__________	+1.16	204054	236420	unknown	unknown
YIR041W	__________	+1.57	194441	306048	unknown	unknown; similar to Pau3p, Yil176p, Yil011p and other
YJR100C	__________	+1.16	194183	225314	unknown	unknown
YKR097W	PCK1______	+1.94	99522	192655	TCA cycle	phosphoenolpyruvate carboxykinase
YLR252W	__________	+1.04	65533	68388	unknown	unknown
YML120C	NDI1______	+2.82	165990	467350	oxidative phosphorylation	NADH-ubiquinone-6 oxidoreductase
YNR076W	PAU6______	+2.08	286858	596691	unknown	seripauperin family
YOR153W	PDR5______	+1.94	1115229	2168551	drug resistance	transporter
YPL131W	RPL5______	-1.33	12768446	9623910	protein synthesis	ribosomal protein L5
YAL046C	__________	-1.03	167210	162707	unknown	unknown
YBR214W	SDS24_____	+2.66	67202	178536	unknown	unknown; nuclear protein; similar to S. pombe sds23
YDR085C	AFR1______	+2.24	122543	274317	mating	cytoskeletal protein, similar to arrestins
YDR452W	PHM5______	+1.30	291098	377510	phosphate metabolism (putative)	vacuolar polyphosphatase
YER144C	UBP5______	+1.89	78982	149496	unknown	ubiquitin pathway
YGL145W	TIP20_____	-1.06	208674	197670	secretion	unknown; interacts with Sec20p
YGR252W	GCN5______	-1.45	132112	91230	chromatin structure	histone acetyltransferase
YIL048W	NEO1______	-1.03	140144	135661	neomycin resistance	ATPase
YJL146W	IDS2______	+1.22	162295	198199	signaling, meiosis pathway	Putative activator of Ime2p
YKL142W	MRP8______	+2.32	413323	960396	protein synthesis	ribosomal protein, mitochondrial small subunit
YLR076C	__________	-1.34	10013272	7454836	unknown	unknown
YLR446W	__________	-1.07	246642	230870	unknown	unknown; similar to human hexokinase I
YMR179W	SPT21_____	-1.06	143225	135414	transcription	transcriptional regulator
YNL237W	YTP1______	+1.63	79109	128827	unknown	unknown; similar to mitochondrial electron transport proteins
YOL141W	PPM2______	-1.01	49446	48978	protein modification	carboxymethyltransferase
YOR351C	MEK1______	-1.16	47459	41000	meiosis	protein kinase
YPR048W	TAH18_____	-1.09	173274	158304	unknown	unknown; similar to NAPDH-cytochrome P450 reductase
YBR026C	(MRF1)____	+1.22	233343	284820	mitochondrial respiration	ARS-binding protein
YCL049C	__________	+1.68	144909	243115	unknown	unknown
YDL143W	CCT4______	+1.12	953179	1065798	protein folding	cytoplasmic chaperonin subunit
YDR264C	AKR1______	+1.53	205524	313556	signaling, pheromone pathway; endocytosis; cell shape control	ankyrin-containing protein
YEL048C	__________	+1.15	88971	102294	unknown	unknown
YGR066C	__________	+1.18	49493	58533	unknown	unknown; similar to Vid24p
YHR080C	__________	+1.58	67735	106687	unknown	unknown; similar to Yfl042p
YJR112W	NNF1______	-1.22	205042	168182	mitosis	nuclear envelope protein
YLR261C	__________	-1.25	167633	133592	unknown	unknown
YML132W	COS3______	+3.38	877618	2965147	unknown	unknown; similar to subtelomerically-encoded proteins
YNL047C	__________	+1.05	101493	106903	unknown	unknown; similar to Ask10p
YOR165W	__________	+1.05	155788	163893	unknown	unknown; similar to transcription factors, has Zn[2]-Cys[6]
YPL143W	RPL33A____	-1.13	1164617	1029530	protein synthesis	ribosomal protein L33A
YAL060W	__________	-1.39	376409	270256	unknown	unknown; similar to alcohol/sorbitol dehydrogenase
YBR226C	__________	+1.05	38363	40380	unknown	unknown
YDR097C	MSH6______	-1.02	102143	100414	DNA repair	MutS homolog; mismatch repair
YDR464W	SPP41_____	+1.07	59452	63591	splicing	negative regulator of spliceosome genes
YER154W	OXA1______	-1.13	394248	348610	respiration	cytochrome c oxidase assembly
YGL157W	__________	+1.85	164011	302856	unknown	unknown; similar to tomato dihydroflavonol 4-reductase
YGR264C	MES1______	-1.06	1023393	968385	protein synthesis	tRNA synthetase, methionyl
YIL060W	__________	-1.56	7162657	4591324	unknown	unknown
YJL158C	CIS3______	+3.42	4222868	14430775	unknown	unknown; overexpression suppresses cik1 deletion
YKL154W	SRP102____	+1.29	740581	957809	secretion	signal recognition particle subunit
YLR088W	GAA1______	+1.04	143706	149668	protein processing	GPI:protein transamidase component
YLR458W	__________	+1.19	91074	108493	unknown	unknown
YMR191W	__________	+2.86	342409	978244	unknown	unknown
YNL249C	MPA43_____	+1.03	153338	157382	unknown	unknown; similar to YDR109c
YOL153C	__________	+1.87	90835	170174	unknown	unknown
YOR363C	PIP2______	+1.48	97881	145185	peroxisome proliferation	transcription factor
YPR060C	ARO7______	-1.36	426879	312936	aromatic amino acid biosynthesis	chorismate mutase
YBR038W	CHS2______	-1.50	42699	28497	cell wall biogenesis	chitin synthase II
YCL061C	__________	-1.68	589998	351873	unknown	unknown
YDL155W	CLB3______	-1.29	281329	218484	cell cycle	G2/M cyclin
YDR276C	PMP3______	-1.91	1113439	583561	salt tolerance (putative)	unknown
YEL059W	__________	+1.39	73278	101641	unknown	unknown
YGR078C	PAC10_____	-1.16	307425	266007	cytoskeleton	non-native actin binding complex subunit
YHR092C	HXT4______	+1.06	66793	70831	transport	hexose permease
YJR124C	__________	+1.32	229119	302599	unknown	unknown; similar to multidrug resistance proteins
YLR272C	YCS4______	+1.00	130505	130645	mitosis, sister chromatid cohesion	cohesin complex component
YMR011W	HXT2______	+1.92	870732	1670921	transport	hexose permease
YNL057W	__________	+1.52	265711	404650	unknown	unknown
YOR177C	__________	+1.55	87669	136023	unknown	unknown
YPL155C	KIP2______	+1.36	105212	143221	cytoskeleton (putative)	kinesin-related protein
YAR003W	__________	-1.14	88292	77489	unknown	unknown
YBR238C	__________	+1.04	278694	288519	unknown	unknown
YDR107C	__________	+1.84	105457	194380	unknown	unknown; similar to Emp70p
YDR476C	__________	+2.30	185106	424919	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YER164W	CHD1______	+1.27	232891	295999	transcription	chromodomain-helicase-DNA-binding (CHD) family
YGL169W	SUA5______	+1.39	236496	329723	protein synthesis	translation initiation protein
YGR276C	RNH70_____	-1.02	385240	378097	DNA replication (putative)	ribonuclease H
YIL070C	MAM33_____	+1.38	217922	301592	respiration	mitochondrial acidic matrix protein
YJL170C	ASG7______	-1.06	65248	61741	unknown	unknown
YKL166C	TPK3______	-1.12	120186	106875	signaling, nutrient control of cell growth	cAMP-dependent protein kinase catalytic subunit
YLR100W	ERG27_____	+1.12	944607	1058097	sterol metabolism	3-keto sterol reductase
YMR202W	ERG2______	+1.27	778056	986788	sterol metabolism	C-8 sterol isomerase
YNL261W	ORC5______	+1.10	267897	294045	DNA replication	origin recognition complex, 50 kD subunit
YOL165C	AAD15_____	+1.67	2022354	3384023	unknown	hypothetical aryl-alcohol dehydrogenase
YOR375C	GDH1______	+1.16	2414706	2802273	glutamate biosynthesis	glutamate dehydrogenase
YPR072W	NOT5______	-1.29	278897	216805	transcription	global negative regulator cpmplex component
YBR050C	REG2______	+1.13	59929	67474	glucose repression	(putative) Glc7p regulatory subunit
YCL076W	__________	-1.13	49114	43474	unknown	unknown
YDL167C	NRP1______	+1.22	232497	283152	unknown	unknown
YDR288W	__________	-1.14	165928	145323	unknown	unknown
YEL071W	DLD3______	+1.43	1887936	2690663	pyruvate metabolism	D-lactate dehydrogenase
YGR090W	__________	-1.12	301543	269247	unknown	unknown
YHR104W	GRE3______	+2.84	173062	491325	unknown	induced by osmotic stress
YJR136C	__________	+1.84	92318	169901	unknown	unknown
YLR284C	ECI1______	-1.03	52390	51028	unknown	putative enoyl-CoA hydratase, peroxisomal
YMR023C	MSS1______	+1.35	98536	133448	protein synthesis (putative)	mitochondrial GTPase; COX1 expression
YNL069C	RPL16B____	-1.70	6866093	4029785	protein synthesis	ribosomal protein L16B
YOR189W	__________	-1.41	306959	218328	unknown	unknown
YPL167C	REV3______	+1.05	67614	70756	DNA repair	polymerase zeta subunit
YAR028W	__________	+1.07	176008	188709	unknown	unknown; similar to subtelomerically-encoded proteins
YBR250W	__________	-1.03	61713	59934	unknown	unknown
YDR119W	__________	-1.22	939805	773256	unknown	unknown; similar to human cystic fibrosis
YDR488C	PAC11_____	-1.01	142735	141548	unknown	unknown; required in absence of Cin8p
YER174C	GRX4______	-1.66	424796	255883	oxidative stress response	glutaredoxin
YGL181W	GTS1______	-1.01	213052	211777	heat shock, flocculation, and bud emergence	transcription factor
YGR288W	MAL13_____	+1.62	91666	148172	maltose utilization	regulator of maltose metabolic genes
YJL182C	__________	-1.42	44518	31374	unknown	unknown
YKL178C	STE3______	+1.24	964272	1190912	mating	a-factor receptor
YLR112W	__________	-1.21	72750	60184	unknown	unknown
YMR214W	SCJ1______	+1.31	326867	426650	unknown	unknown; similar to E. coli DnaJ
YNL273W	TOF1______	+1.23	271644	333719	unknown	topoisomerase I interacting factor
YOR011W	__________	-1.19	151446	127030	unknown	ATP-binding cassette (ABC) superfamily
YOR387C	__________	+1.33	90786	120473	unknown	unknown
YPR084W	__________	-1.17	177850	151541	unknown	unknown
YBR062C	__________	+1.04	149416	154710	unknown	unknown
YCLX12W	__________	+1.09	130521	142040
YDL179W	PCL9______	+1.23	112791	138760	cell cycle	cyclin (Pho85p)
YDR300C	PRO1______	-1.25	275384	220977	proline biosynthesis	glutamate 5-kinase
YER005W	YND1______	+1.33	160887	214506	protein glycosylation (putative)	apyrase (NDPase/NTPase)
YGR102C	__________	+1.07	227361	242651	unknown	unknown
YHR116W	__________	-1.16	181340	155979	unknown	unknown
YJR148W	BAT2______	+1.29	1124477	1445351	branched chain amino acid biosynthesis	transaminase
YLR295C	ATP14_____	+1.30	218421	283881	ATP synthesis	F1F0-ATPase complex, subunit h
YMR034C	__________	+1.27	75770	95876	unknown	unknown
YNL081C	__________	-1.28	321722	250399	unknown	unknown; similar to mitochondrial ribosomal protein S13 of
YOR199W	__________	-1.08	116610	107478	unknown	unknown
YPL179W	PPQ1______	+2.25	460925	1035286	translational regulation	protein phosphatase
YBL001C	ECM15_____	-1.16	582888	503902	cell wall biogenesis	unknown
YBR262C	__________	-1.31	257802	197438	unknown	unknown
YDL001W	__________	-1.11	133276	119918	unknown	unknown; similar to Yfr048p
YDR131C	__________	+1.03	88322	90853	unknown	unknown
YDR500C	RPL37B____	-1.71	4619738	2698814	protein synthesis	ribosomal protein L37B
YFL-TYA	TY2A______	-1.91	198299	103655
YGL193C	__________	-1.02	164642	161702	unknown	unknown
YHL001W	RPL14B____	-2.42	11982943	4953336	protein synthesis	ribosomal protein L14B
YIL092W	__________	+1.12	155135	173920	unknown	unknown
YJL194W	CDC6______	-1.61	276057	171483	DNA replication	pre-initiation complex formation
YKL190W	CNB1______	+1.29	360999	466526	signaling	calcineurin regulatory B subunit
YLR124W	__________	-1.16	37368	32299	unknown	unknown
YML001W	YPT7______	-1.03	87924	85347	endocytosis	GTP-binding protein, rab family
YMR226C	__________	+1.04	1521094	1588950	unknown	unknown; similar to insect-type alcohol dehydrogenase,
YOR023C	AHC1______	+1.49	226522	337857	chromatin structure	histone acetyltransferase complex subunit
YPL001W	HAT1______	+1.06	249384	265440	chromatin structure	histone acetyltransferase complex subunit
YPR096C	__________	-1.27	46199	36442	unknown	unknown
YBR074W	__________	-1.10	159676	144579	unknown	unknown; similar to Ape3p (aminopeptidase Y)
YCR012W	PGK1______	+1.01	11166227	11278306	glycolysis	phosphoglycerate kinase
YDL191W	RPL35A____	-2.13	3566783	1675551	protein synthesis	ribosomal protein L35A
YDR312W	SSF2______	-1.68	823744	489443	signaling (putative)	suppresses G-protein beta subunit mutation
YGL001C	ERG26_____	-1.08	279012	258031	sterol metabolism	sterol C-3 dehydrogenase
YGR112W	SHY1______	-1.15	156004	135387	respiration	unknown
YHR128W	FUR1______	-1.68	1711521	1020290	pyrimidine salvage pathway	uracil phosphoribosyltransferase
YJL001W	PRE3______	+1.16	793430	920410	protein degradation	20S proteasome subunit (beta1)
YKL001C	MET14_____	-1.44	86140	59775	sulfate assimilation	adenylylsulfate kinase
YLL001W	DNM1______	+1.47	242775	356222	endocytosis	dynamin-related protein
YLR307W	CDA1______	-1.62	65242	40243	sporulation	chitin deacetylase
YNL093W	YPT53_____	+2.60	43969	114204	endocytosis	GTP-binding protein, rab family
YOL001W	PHO80_____	-1.15	197119	171381	cell cycle	cyclin (Pho85p)
YOR211C	MGM1______	+1.16	61786	71513	mitochondrial genome maintenance	dynamin family protein
YPL190C	NAB3______	+1.14	443143	504726	mRNA splicing	nuclear polyadenylated RNA-binding protein
YAR050W	FLO1______	-1.15	57923	50311	flocculation	cell wall protein
YBL011W	SCT1______	+1.27	120601	153091	unknown	suppresses a choline-transport mutant
YBR274W	CHK1______	-1.10	148733	135618	cell cycle	DNA damage checkpoint protein kinase
YDL013W	HEX3______	+1.06	136338	144812	hexose metabolism (putative)	unknown
YDR143C	SAN1______	-1.43	140552	98180	silencing	(putative) transcriptional regulator
YDR512C	__________	+1.04	239884	250436	unknown	unknown
YFL010C	__________	-1.06	1156489	1091926	unknown	unknown
YGL205W	POX1______	-1.52	75347	49703	fatty acid metabolism	acyl-CoA oxidase
YHL009C	YAP3______	+1.22	93636	114263	transcription	basic leu zipper transcription factor
YIL103W	__________	-1.20	308335	256176	unknown	unknown; similar to diptheria toxin resistance protein
YJL206C	__________	+1.20	91782	109900	unknown	unknown; similar to Put3p and other transcription
YKL202W	__________	+1.06	47966	51050	unknown	unknown
YLR136C	TIS11_____	+2.88	46060	132757	unknown	unknown
YML011C	__________	+1.19	125536	149980	unknown	unknown
YMR238W	DFG5______	+3.75	623939	2342782	pseudohyphal growth	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YNL295W	__________	+1.00	101005	101092	unknown	unknown
YOR035C	SHE4______	+2.40	124006	297777	asymmetric HO expression	unknown
YPL013C	__________	-1.37	372934	272985	protein synthesis	ribosomal protein, mitochondrial S16
YPR108W	RPN7______	+1.17	615043	721221	protein degradation	26S proteasome regulatory subunit
YBR085W	AAC3______	+1.01	99856	100700	transport	mitochondrial ADP/ATP translocator
YCR023C	__________	-1.14	176956	155551	unknown	major facilitator superfamily
YDL203C	__________	+1.28	108173	138237	unknown	unknown
YDR322W	MRPL35____	-1.15	192112	167140	protein synthesis	ribosomal protein, mitochondrial L35
YER025W	GCD11_____	-1.17	1359462	1164751	protein synthesis	translation initiation factor eIF2 gamma subunit
YGL013C	PDR1______	-1.11	192377	173363	transport	transcription factor, regulates ABC transporters
YGR124W	ASN2______	+1.05	1929114	2027005	asparagine biosynthesis	asparagine synthetase
YHR139C	SPS100____	-1.94	125571	64732	sporulation	spore wall maturation protein
YJL013C	MAD3______	+1.54	220387	338548	cell cycle	spindle checkpoint complex subunit
YKL012W	PRP40_____	+1.60	176543	281648	mRNA splicing	U1 snRNP protein
YLL013C	__________	+1.21	84764	102578	unknown	unknown; similar to Drosophila pumilio protein
YLR318W	EST2______	+1.14	119240	135392	telomere length regulation	telomerase catalytic subunit
YMR055C	BUB2______	+1.26	100758	126539	cell cycle, checkpoint	unknown
YNL105W	__________	-1.19	60731	50937	unknown	unknown
YOL013C	HRD1______	+1.23	151001	185992	protein degradation	unknown; required to degrade misfolded ER lumenal and integral membrane proteins
YOR223W	__________	+1.28	178237	227774	unknown	unknown; similar to class II family of aminoacyl-tRNA
YPL202C	__________	-1.02	286874	280257	unknown	unknown; similar to Rcs1p
YAR073W	IMD1______	+1.08	2349183	2525968	unknown	unknown; similar to Pur5p, may be an inosine-5'-monophosphate dehydrogenase
YBL023C	MCM2______	+1.25	197079	246891	DNA replication	MCM initiator complex
YBR286W	APE3______	-1.20	923156	766449	protein degradation	vacuolar aminopeptidase Y
YDL025C	__________	+1.14	117161	133989	unknown	putative protein kinase
YDR155C	CPH1______	-1.06	704848	662941	protein folding	peptidyl-prolyl cis-trans isomerase
YDR524C	AGE1______	+1.54	223842	343806	secretion	GTPase activating protein for ARFs
YFL019C	__________	-1.29	81285	63116	unknown	unknown
YGL217C	__________	+1.42	50468	71633	unknown	unknown; similar to mouse kinesin-related protein KIF3
YHL021C	__________	+3.04	121015	368473	unknown	unknown
YIL115C	NUP159____	+1.11	441379	490645	nuclear protein targeting	nuclear pore protein
YJL218W	__________	-1.19	69501	58259	unknown	unknown; similar to E. coli galactoside O-acetyltransferase
YKL214C	__________	-1.08	230390	213999	unknown	unknown
YLR148W	PEP3______	+1.07	172827	184998	vacuole biogenesis	vacuolar membrane protein
YML022W	APT1______	-1.53	1125198	737368	purine biosynthesis	adenine phosphoribosyltransferase
YMR251W	__________	+1.18	70800	83494	unknown	unknown
YNL307C	MCK1______	+1.08	651951	705827	meiosis	protein kinase
YOR047C	STD1______	-1.11	390686	352943	glucose repression	modulator of glucose repression
YPL025C	__________	-1.26	109097	86700	unknown	unknown
YPR120C	CLB5______	-1.01	135179	134294	cell cycle	G1/S cyclin
YBR096W	__________	-1.07	265030	247772	unknown	unknown
YCR033W	__________	-1.42	79092	55770	unknown	unknown
YDL215C	GDH2______	+1.80	117355	210837	glutamate metabolism	NAD-dependent glutamate dehydrogenase
YDR334W	SWR1______	+1.72	152694	262958	RNA processing (putative)	RNA helicase (putative)
YER037W	__________	+1.37	206254	282687	unknown	unknown
YGL025C	PGD1______	+1.62	403624	654674	transcription	RNA polymerase II mediator subunit
YGR136W	__________	+3.32	446563	1482294	unknown	unknown
YHR149C	__________	+1.15	188789	217653	unknown	unknown
YJL025W	RRN7______	-1.10	139933	127231	transcription	component of rDNA transcription factor
YKL024C	URA6______	-1.48	844248	569565	pyrimidine metabolism	uridine-monophosphate kinase
YLL025W	__________	+2.07	192111	397053	unknown	unknown; similar to Pau3p and members of the PAU1 family
YLR330W	CHS5______	+1.35	615084	830354	cell wall biogenesis	unknown
YMR067C	__________	+1.09	250645	272594	unknown	unknown
YNL117W	MLS1______	+1.30	84375	110037	glyoxylate cycle	malate synthase
YOL025W	LAG2______	-1.02	122794	119827	aging	unknown
YOR235W	__________	+1.08	90655	97534	unknown	unknown
YPL214C	THI6______	+1.51	216376	326852	thiamine biosynthesis	TMP pyrophosphorylase, hydroxyethylthiazole kinase
YER186C	__________	-1.21	349167	289263	unknown	unknown
YBL035C	POL12_____	+1.06	68304	72403	DNA replication	DNA polymerase alpha, 70 kD subunit
YBR298C	MAL31_____	+1.06	43348	45899	transport	maltose permease
YDL037C	__________	+1.18	45463	53845	unknown	similar to glucan 1,4-alpha-glucosidase
YDR167W	TAF25_____	-1.19	316135	266188	transcription	TFIID 23 kD subunit
YDR536W	STL1______	+1.08	81680	88060	transport	hexose transporter (putative)
YFL030W	__________	+3.21	97180	312291	unknown	unknown; similar to Methanobacterium aspartate transaminase
YGL228W	SHE10_____	+1.46	297782	435045	unknown	causes lethality when overexpressed
YHL032C	GUT1______	+2.05	115884	237580	glycerol utilization	glycerol kinase
YIL127C	__________	-1.70	508660	299797	unknown	unknown
YJR006W	HYS2______	+1.29	273895	352034	DNA replication	polymerase delta 55 KD subunit
YKR001C	VPS1______	+1.43	464471	664923	vacuolar protein targeting	GTPase, dynamin family
YLR158C	ASP3-3____	+2.08	1056285	2197310	asparagine utilization	L-asparaginase II
YML033W	__________	-1.32	200177	152106
YMR262W	__________	+1.08	173853	188280	unknown	unknown
YNL319W	__________	-1.05	149282	142777	unknown	unknown
YOR059C	__________	+1.27	506493	643062	unknown	unknown
YPL037C	EGD1______	-1.66	4713023	2843938	transcription	regulator of pol II transcribed genes; enhances Gal4 DNA binding
YPR132W	RPS23B____	-1.54	15349932	9965507	protein synthesis	ribosomal protein S23B
YBR108W	__________	+2.46	104331	256281	unknown	unknown; similar to wheat glutenin, secalin
YCR045C	__________	-1.03	64465	62458	unknown	unknown; similar to protease B (Prb1p) and subtilisin family
YDL227C	HO________	-1.08	39799	37000	mating type switching	homothallic switching endonuclease
YDR346C	__________	-1.66	1056599	635893	unknown	unknown
YGL037C	PNC1______	+2.23	244664	544888	pyridine nucleotide cycle	pyrazinamidase and nicotinamidase
YGR148C	RPL24B____	-1.93	10964710	5673901	protein synthesis	ribosomal protein L24B
YHR161C	YAP1801___	-1.95	730487	374697	endocytosis and secretion	clathrin assembly protein
YJL037W	__________	-1.70	166558	97762	unknown	unknown
YKL035W	UGP1______	-1.06	286619	270288	pyrimidine metabolism	UGP1, UDP-glucose pyrophosphorylase
YLL037W	__________	-1.87	367374	196506	unknown	unknown; similar to human platelet-activating factor
YLR342W	FKS1______	+2.28	2488906	5667219	cell wall biogenesis	1,3-beta-D-glucan synthase subunit
YMR078C	CTF18_____	+1.07	156507	167690	mitosis, chromosome transmission	unknown
YNL129W	__________	-1.19	100135	84278	unknown	unknown
YOL037C	__________	+1.17	169906	199061	unknown	unknown
YOR247W	SRL1______	+1.32	2181274	2884898	unknown	unknown; similar to Svs1p; suppressor of Rad53 lethality
YPL226W	NEW1______	+1.94	636833	1237126	unknown	unknown; similar to members of the ATP-binding cassette (AC); prion
YHR218W	__________	+2.93	234436	687527	unknown	unknown; similar to other subtelomerically-encoded proteins
YBL047C	__________	+1.30	65911	85416	unknown	unknown; similar to Uso1p, Pan1p, and mouse eps15
YDL049C	KNH1______	+1.12	61817	69115	cell wall biogenesis	Kre9p homolog
YDR177W	UBC1______	-1.16	566996	487113	protein degradation, ubiquitin-mediated	E2 ub.-conjugating enzyme
YFL040W	__________	+1.04	81702	85293	unknown	unknown; similar to members of the sugar transport family
YGL240W	DOC1______	+1.21	65541	79363	cell cycle	anaphase-promoting complex subunit
YHL044W	__________	+1.28	66952	85632	unknown	unknown; similar to subtelomerically-encoded proteins
YIL139C	REV7______	-1.04	165566	159359	DNA repair	DNA polymerase zeta

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YJR017C	ESS1______	+1.54	433120	667900	protein folding	peptidyl-prolyl cis/trans isomerase
YKR013W	PRY2______	+2.83	1299760	3680907	unknown	unknown; similar to plant PR-pathogen related proteins
YLR170C	APS1______	+1.13	220238	249945	secretion	AP-1 complex subunit
YML043C	RRN11_____	-1.19	199576	168065	transcription	component of rDNA transcription factor
YMR274C	RCE1______	-1.11	120961	109138	protein processing	protease, acts on Ras and a-factor C-termini
YNL331C	AAD14_____	+1.93	1626268	3136927	unknown	hypothetical aryl-alcohol dehydrogenase
YOR071C	__________	+1.58	297018	470137	transport	thiamine transporter (putative)
YPL049C	DIG1______	+1.08	651993	702292	invasive growth	MAP kinase-associated protein
YPR142C	__________	-1.26	390702	309140	unknown	unknown
YBR119W	MUD1______	+1.25	142385	178122	mRNA splicing	U1 snRNP A protein
YCR057C	PWP2______	+1.26	182928	231141	cytoskeleton (putative)	unknown
YDL239C	__________	+1.05	66668	70016	unknown	unknown
YDR358W	GGA1______	+1.71	85139	145214	secretion (putative)	unknown; binds ARF
YER057C	HIG1______	+1.04	556234	576585	heat shock response	heat-induced protein
YGL049C	TIF4632___	-1.06	166613	157681	protein synthesis	mRNA cap-binding protein (eIF-4F) subunit
YGR160W	__________	+1.23	1206487	1482089	unknown	unknown
YHR173C	__________	-1.71	191870	112388	unknown	unknown
YJL050W	MTR4______	-1.12	596016	531054	mRNA export	RNA helicase
YKL047W	__________	+1.19	184217	218723	unknown	unknown
YLL049W	__________	+1.09	257436	281506	unknown	unknown
YLR354C	TAL1______	+1.03	1974316	2028413	pentose phosphate cycle	transaldolase
YMR089C	YTA12_____	+1.29	107864	139368	protein folding	mitochondrial chaperonin
YNL141W	AAH1______	-1.52	1072625	706419	purine metabolism	adenine deaminase
YOL049W	GSH2______	-1.67	957837	574677	glutathione biosynthesis	glutathione synthetase
YOR259C	RPT4______	-1.15	438954	380644	protein degradation	26S proteasome regulatory subunit
YPL238C	__________	+1.89	223390	423188	unknown	unknown
YJR160C	__________	-1.11	59131	53343	unknown	unknown; similar to maltose permeases (maltose/H+
YBL059W	__________	-1.08	123102	113937	unknown	unknown
YDL061C	RPS29B____	-1.85	4015188	2175579	protein synthesis	ribosomal protein S29B
YDR188W	CCT6______	+1.10	1046645	1154040	protein folding	cytoplasmic chaperonin complex
YFL052W	__________	+1.03	67580	69793	unknown	unknown; similar to MAL regulatory proteins
YGL252C	RTG2______	+1.28	452521	579282	interorganelle communication	unknown
YHR004C	NEM1______	-1.07	235975	220352	nuclear organization and biogenesis	phosphatase
YIL151C	__________	+1.76	608509	1069206	unknown	unknown; similar to mitochondrial aldehyde dehydrogenase
YJR028W	__________	+2.01	6745272	13571679	transposition	TyA gag protein
YKR025W	RPC37_____	+1.01	495583	502109	transcription	RNA polymerase III 37 kDa subunit
YLR182W	SWI6______	+1.12	179134	201057	cell cycle	transcription factor
YML053C	__________	+1.09	195846	214041	unknown	unknown
YNR004W	__________	+1.08	114584	124065	unknown	unknown; similar to bovine interferon gamma precursor
YOR083W	__________	+1.27	59365	75350	unknown	unknown
YPR154W	__________	+1.12	37726	42390	unknown	unknown; similar to several SH3 domain-containing proteins
YBR131W	CCZ1______	-1.06	76510	72375	calcium, caffeine, and zinc sensitivity	unknown
YDR003W	__________	+1.36	80438	109752	unknown	unknown; similar to Ybr005p
YDR368W	YPR1______	-1.68	543302	324273	unknown	unknown; similar to aldo-keto reductases
YER067W	__________	+1.13	84049	95268	unknown	unknown
YGL061C	DUO1______	-1.09	102349	93807	mitosis	unknown; spindle protein
YGR168C	__________	+2.41	71430	172198	unknown	unknown; similar to human vasoactive intestinal peptide
YHR185C	ADY1______	-1.02	48843	48101	meiosis (putative)	unknown
YJL062W	LAS21_____	+1.27	224621	284788	unknown	major facilitator superfamily
YKL059C	__________	-1.15	152836	133155	unknown	unknown; similar to members of the chaperonin-containing
YLL061W	MMP1______	+1.23	577644	709121	transport, amino acid	high affinity S-methylmethionine permease
YLR366W	__________	-1.14	42345	37025	unknown	unknown
YMR101C	SRT1______	+1.09	50936	55407	protein glycosylation	cis-prenytransferase (putative)
YNL153C	GIM3______	-1.11	472257	423583	protein folding	prefoldin subunit 4
YOL059W	GPD2______	+1.51	525436	794586	glycerol metabolism	glycerol-3-phosphate dehydrogenase
YOR271C	__________	-1.65	1180858	713897	unknown	unknown; similar to rat tricarboxylate carrier
YBL071C	__________	-1.31	174108	132729	unknown	unknown
YDL073W	__________	+1.12	64374	71852	unknown	unknown
YDR200C	__________	+1.13	123070	138802	unknown	unknown
YFL064C	__________	+2.12	138629	294201	unknown	unknown; similar to other subtelomerically-encoded proteins
YGR001C	__________	-1.34	486617	362212	unknown	unknown
YHR015W	MIP6______	-1.15	114530	99699	mRNA export, putative	RNA-binding protein
YIL162W	SUC2______	+1.17	256541	301352	sucrose utilization	invertase
YJR040W	GEF1______	+1.48	233124	345414	transport	CLC chloride channel, iron transporter
YKR037C	SPC34_____	+1.21	184209	223022	cytoskeleton	spindle pole body component
YLR194C	__________	+5.72	1259455	7199114	unknown	unknown
YML064C	TEM1______	-1.15	249387	216404	cell cycle	GTP-binding protein, RAS superfamily
YMR296C	LCB1______	+1.02	889357	909986	sphinogolipid metabolism	serine palmitoyltransferase component
YNR016C	ACC1______	+1.10	70716	78119	fatty acid metabolism	acetyl-CoA carboxylase
YOR095C	RKI1______	-1.55	885836	570221	pentose phosphate cycle	ribose-5-phosphate ketol-isomerase
YPL071C	__________	+1.12	230809	257831	unknown	unknown
YPR162C	ORC4______	+1.10	164513	180550	DNA replication	origin recognition complex 56 kD subunit
YBR143C	SUP45_____	-1.13	671553	595250	protein synthesis	translation release factor eRF1 subunit
YCR081W	SRB8______	+1.24	65828	81477	transcription	RNA polymerase II mediator subunit
YDR015C	__________	-1.09	52884	48582	unknown	unknown
YDR380W	__________	-1.45	1267492	872659	unknown	unknown; similar to pyruvate decarboxylase, pyruvate
YER077C	__________	+1.72	142299	244309	unknown	unknown; similar to class I tRNA synthetases
YGL073W	HSF1______	-1.15	91383	79305	heat shock	transcription factor
YGR180C	RNR4______	+1.69	757180	1276407	DNA replication	ribonucleotide reductase
YHR197W	__________	-1.47	456449	310589	unknown	unknown
YJL074C	SMC3______	+1.19	156170	185998	chromatin structure	cohesin
YKL071W	__________	+1.50	400293	598481	unknown	unknown
YLR006C	SSK1______	+2.89	145879	421036	signaling	two-component pathway
YLR378C	SEC61_____	+1.66	1145669	1896790	secretion	ER protein translocation complex subunit
YMR113W	FOL3______	-1.10	224105	203996	folate metabolism	dihydrofolate synthetase
YNL165W	__________	-1.12	233643	207707	unknown	unknown
YOL071W	__________	+1.21	197722	240198	unknown	unknown
YOR283W	__________	-1.20	568937	475648	unknown	unknown; similar to phosphoglycerate mutases
YPL259C	APM1______	+1.05	286208	300945	secretion	AP-1 complex subunit
YBL083C	__________	-1.57	228682	145821	unknown	unknown
YDL085W	__________	+1.74	50513	87652	unknown	unknown; similar to NADH dehydrogenase (ubiquinone)
YFR008W	__________	+1.09	311864	338980	unknown	unknown
YGR013W	SNU71_____	+1.60	110037	176290	mRNA splicing	U1 snRNP protein
YHR026W	PPA1______	-1.56	1775455	1134996	vacuolar acidification	vacuolar H+-ATPase proteolipid protein
YIL173W	VTH1______	+2.25	260685	586230	vacuolar protein targeting	unknown; similar to Vps10p
YJR052W	RAD7______	+2.53	171742	435196	DNA repair, nucleotide excision	NEF4 component
YKR049C	__________	+1.91	183219	350661	unknown	unknown
YLR206W	ENT2______	-1.40	44191	31666	endocytosis (putative)	unknown; epsin homolog
YML076C	__________	+1.43	113270	162200	unknown	unknown; similar to transcription factors, has Zn[2]-Cys[6]
YNR028W	CPR8______	-1.22	256312	209488	protein folding	peptidyl-prolyl cis-trans isomerase

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YOR107W	RGS2______	+1.09	193367	209940	signaling	GTPase-activating protein (GAP) for Gpa2p
YPL083C	SEN54_____	+1.17	336279	392364	tRNA splicing	splicing endonuclease subunit
YPR174C	__________	+1.27	89120	113050	unknown	unknown; similar to C. elegans nuclear lamin
YBR155W	CNS1______	-1.57	467858	298038	unknown	unknown; similar to Sti1p; suppresses cyclophilin mutant
YCR092C	MSH3______	+1.06	156752	165730	DNA repair, mismatch	MutS homolog
YDR027C	LUV1______	+1.06	381907	404049	vacuole biogenesis (putative)	unknown
YDR392W	SPT3______	-1.11	217113	195508	chromatin structure	histone acetyltransferase complex subunit
YER088C	DOT6______	+1.51	245382	370742	silencing (telomere)	nuclear protein with Myb DNA-binding domain
YGL085W	__________	+1.20	155438	186061	unknown	unknown; similar to Staphylococcus hyicus thermonuclease
YGR192C	TDH3______	+1.02	15625084	15943249	glycolysis	glyceraldehyde-3-phosphate dehydrogenase 3
YHR209W	__________	-3.29	8559763	2600055	unknown	unknown; similar to Yer175p
YJL086C	__________	+1.65	117498	193347	unknown	unknown
YKL083W	__________	-1.77	237068	134070	unknown	unknown
YLR018C	POM34_____	-1.18	461179	389923	nuclear protein targeting	nuclear pore protein
YLR390W	ECM19_____	-1.21	165937	136912	cell wall biogenesis	unknown
YMR124W	__________	+1.10	669560	733619	unknown	unknown
YNL177C	__________	-1.18	383149	325855	unknown	unknown
YOL083W	__________	+1.76	86467	151767	unknown	unknown
YOR295W	__________	+1.01	224545	226918	unknown	unknown
YPL271W	ATP15_____	+1.31	399808	523013	ATP synthesis	F1-ATP synthase epsilon subunit
YAL002W	VPS8______	+1.41	157400	222455	vacuolar protein targeting	unknown
YBR167C	POP7______	-1.13	147044	130302	rRNA and tRNA processing	RNase P and RNase MRP subunit
YCR104W	PAU3______	+1.85	121495	224698	unknown	unknown; similar to bovine alcohol dehydrogenase
YDR038C	ENA5______	+1.66	267602	443497	transport	Na(+) ATPase
YDR405W	MRP20_____	+1.05	187827	197811	protein synthesis	ribosomal protein, mitochondrial L23
YER100W	UBC6______	-1.14	419561	368907	protein degradation, ubiquitin-mediated	ubiquitin-conjugating enzyme
YGL098W	__________	+1.27	127842	162603	unknown	unknown
YGR205W	__________	-1.62	71898	44260	unknown	unknown; similar to E. coli putrescine transport protein
YIL002C	INP51_____	+1.30	155652	202298	phosphatidylinositol metabolism	phosphatidylinositol 4,5-bisphosphate 5-phosphatase
YJL099W	CHS6______	+2.42	139746	338687	cell wall biogenesis	chitin biosynthesis
YKL096W	CWP1______	+1.10	916546	1009202	cell wall protein	beta-1,6-glucan acceptor
YLR031W	__________	-1.24	69295	55673	unknown	unknown
YLR403W	SFP1______	+1.42	123383	175562	unknown	overexpression inhibits nuclear protein localization
YMR136W	GAT2______	-1.17	240714	205666	transcription (putative)	transcription factor (putative_; GATA zinc finger protein
YNL190W	__________	+1.14	3383980	3859394	unknown	unknown
YOL096C	COQ3______	-1.17	144356	123312	ubiquinone biosynthesis	3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase
YOR306C	__________	+2.93	474974	1390748	unknown	unknown; similar to human X-linked PEST-containing
YPR001W	CIT3______	+1.40	77544	108440	TCA cycle	citrate synthase
YBL096C	__________	+1.29	66623	85693	unknown	unknown
YDL098C	SNU23_____	-1.06	131901	124553	mRNA splicing (putative)	U4/U6.U5 snRNP protein
YDR221W	__________	+1.19	124224	147311	unknown	unknown; similar to the beta subunit of human glucosidase
YEL002C	WBP1______	+1.19	207185	246031	protein glycosylation	oligosaccharyltransferase complex subunit
YFR021W	__________	+1.11	110932	122869	unknown	unknown
YGR026W	__________	-1.29	314627	244826	unknown	unknown
YHR039C	VMA10_____	-1.26	1184533	942350	vacuolar acidification	vacuolar H-ATPase 13 kDa subunit
YIR009W	MSL1______	-1.03	123377	119879	mRNA splicing	U2 snRNP protein
YJR065C	ARP3______	+1.78	697004	1237372	cytoskeleton	actin-related protein
YKR062W	TFA2______	+1.17	215327	252585	transcription	TFIIE 43 kD subunit
YLR219W	__________	+1.24	128851	159888	unknown	unknown
YML089C	__________	+1.15	52250	60095	unknown	unknown
YNL002C	RLP7______	-1.43	1142067	801428	protein synthesis	ribosomal protein L7 (putative)
YNR041C	COQ2______	+1.02	279966	285356	ubiquinone biosynthesis	para-hydroxybenzoate polyprenyltransferase
YOR120W	GCY1______	+1.48	216501	320923	unknown	unknown; similar to mammalian aldo-keto reductases
YPL096W	PNG1______	+1.01	181216	182430	protein modification	peptide:N-glycanase
YPR187W	RPO26_____	-2.60	2137913	821671	transcription	Shared subunit of RNA polymerases I, II, and III
YAL015C	NTG1______	-1.42	132976	93873	DNA repair	DNA glycosylase
YBR179C	FZO1______	-1.28	199553	155409	mitochondrial biogenesis	mitochondrial membrane GTPase
YCRX09C	__________	-1.43	140809	98239
YDR050C	TPI1______	-1.66	13585580	8178881	glycolysis	triosephosphate isomerase
YDR417C	__________	-2.91	7257231	2490376	unknown	unknown
YER112W	LSM4______	-2.12	523405	246481	mRNA splicing	U6 snRNP protein
YGL110C	__________	-1.10	252488	229493	unknown	unknown
YGR217W	CCH1______	+1.18	230039	271302	transport	(putative) Ca(2+) channel protein
YJL111W	CCT7______	+1.01	1095785	1105932	protein folding	cytoplasmic chaperonin complex
YKL107W	__________	+1.34	63542	85103	unknown	unknown
YLR041W	__________	+1.34	255051	340801	unknown	unknown
YLR413W	__________	-2.84	1200232	422369	unknown	unknown
YMR148W	__________	-1.12	182894	163334	unknown	unknown
YNL202W	SPS19_____	+1.19	72599	86040	sporulation	peroxisomal 2,4-dienoyl-CoA reductase
YOL106W	__________	-2.59	4390358	1693322	unknown	unknown
YOR318C	__________	-1.21	83815	69022	unknown	unknown
YPR013C	__________	-1.16	131300	113642	unknown	unknown; similar to mouse REX1 encoded transcription factor
YBL106C	SRO77_____	+1.14	68408	78096	secretion (putative)	unknown; homolog of Drosophila tumor suppressor l(2)gl
YCL013W	__________	+1.24	69241	85586
YDL110C	__________	+2.10	207254	435664	unknown	unknown
YDR233C	__________	-1.31	1986068	1516982	unknown	unknown
YEL014C	__________	-1.73	167855	96999	unknown	unknown
YFR032C	__________	-1.03	69216	66893	unknown	unknown
YGR036C	CAX4______	+1.06	115629	122835	cell wall biogenesis	unknown
YIR020C	__________	-1.06	99315	93769	unknown	unknown
YJR077C	MIR1______	+2.90	1102019	3191192	transport	mitochondrial phosphate transporter
YKR074W	__________	-1.13	301464	265836	unknown	unknown
YLR229C	CDC42_____	-1.11	638330	574814	signaling, filamentous or polarized growth	GTPase, Rho subfamily
YNL014W	__________	+1.11	605883	672548	unknown	unknown; similar to translation elongation factor Yef3p,
YNR053C	__________	+1.04	1114062	1162175	unknown	unknown; similar to human breast tumor-associated
YOR132W	VPS17_____	+1.13	326513	368874	vacuolar protein targeting	peripheral membrane protein
YPL108W	__________	-1.20	176566	146892	unknown	unknown
YPR199C	ARR1______	+1.28	178959	228752	transcription	basic leu zipper transcription factor
YAL027W	__________	-3.77	499923	132527	unknown	unknown
YBR191W	RPL21A____	-2.08	7652917	3684849	protein synthesis	ribosomal protein L21A
YCRX21C	__________	+1.17	1377838	1613800
YDR062W	LCB2______	+1.21	382467	461779	sphingolipid biosynthesis	serine C-palmitoyltransferase subunit
YDR429C	TIF35_____	-1.60	1545751	963344	protein synthesis	translation initiation factor eIF3 subunit
YER123W	YCK3______	-1.88	272519	145261	cell proliferation	plasma membrane-bound casein kinase I
YGL122C	NAB2______	-1.36	47339	34818	mRNA processing	poly(A)+RNA binding protein
YGR229C	SMI1______	+1.10	342335	375637	cell wall biogenesis	may regulate glucan and chitin synthesis
YIL025C	__________	+1.18	63674	75012	unknown	unknown
YJL123C	__________	+1.60	165327	264167	unknown	unknown
YKL119C	VPH2______	-1.14	93314	81972	vacuolar acidification	vacuolar H+-ATPase assembly protein
YLR053C	__________	-1.06	53393	50551	unknown	unknown; similar to xylose isomerase

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YNL214W	PEX17_____	-1.07	88702	83254	peroxisome biogenesis	peripheral membrane protein
YOL118C	__________	+1.10	130039	142985	unknown	unknown
YOR330C	MIP1______	+1.41	236742	333463	DNA replication	mitochondrial DNA polymerase catalytic subunit
YPR025C	CCL1______	-1.01	198284	197264	transcription	TFIIH subunit
YBR005W	__________	+1.91	173087	331244	unknown	unknown
YCL026C	FRM2______	-1.21	66097	54649	signaling, fatty acid-mediated	unknown
YDL122W	UBP1______	+1.05	135090	142374	protein degradation, ubiquitin-mediated	ubiquitin-specific protease
YEL025C	SRI1______	+1.47	159933	234963	unknown	unknown; interacts with SWI/SNF and RSC
YFR042W	__________	-1.02	152843	149538	unknown	unknown
YGR043C	__________	+1.34	71575	95752	unknown	unknown; similar to Tal1p
YHR060W	VMA22_____	-1.16	206337	178251	vacuolar acidification	vacuolar H+-ATPase assembly protein
YIR030C	DCG1______	+1.06	119923	126566	unknown	may be involved in catabolite repression
YJR090C	GRR1______	+1.50	114650	172326	glucose repression (and cell cycle)	cyclin F box protein
YKR086W	PRP16_____	+1.09	350126	383381	mRNA splicing	RNA helicase
YLR241W	__________	+2.03	161067	327047	unknown	major facilitator superfamily
YML110C	COQ5______	-1.09	681414	626763	ubiquinone biosynthesis	methyltransferase
YNL026W	__________	+1.14	69805	79445	unknown	unknown
YNR065C	__________	+3.65	221082	807404	unknown	unknown; similar to Pep1p
YPL120W	VPS30_____	+1.05	134144	141057	vacuolar protein targeting	unknown?
YAL036C	FUN11_____	+1.08	285756	309707	unknown	unknown; similar to Xenopus laevis GTP-binding protein DRG
YBR203W	__________	+1.47	46667	68604	unknown	unknown
YDR074W	TPS2______	+2.16	138790	300036	trehalose metabolism	trehalose-6-phosphate phosphatase
YDR441C	APT2______	+1.33	374792	498264	purine metabolism	unknown; similar to adenine phosphoribosyltransferase
YER135C	__________	-1.40	47295	33829	unknown	unknown
YGL134W	PCL10_____	+1.18	103520	122429	cell cycle	cyclin (Pho85p)
YGR241C	YAP1802___	+1.09	170726	185650	endocytosis and secretion	clathrin assembly protein
YIL037C	__________	-1.29	80503	62190	unknown	unknown
YJL135W	__________	-1.01	40023	39786	unknown	unknown
YKL131W	__________	-1.19	43246	36408	unknown	unknown
YLR065C	__________	-1.44	419930	292529	unknown	unknown
YLR435W	__________	-1.69	764290	452559	unknown	unknown
YMR170C	ALD2______	+2.27	151741	343789	ethanol utilization	aldehyde dehydrogenase
YNL226W	__________	+1.43	60681	87038	unknown	unknown
YOL130W	ALR1______	+1.26	126336	159081	aluminum resistance	ion transporter, putative
YOR342C	__________	-1.02	543402	533151	unknown	unknown
YPR037C	__________	+1.03	362617	372157	unknown	unknown; similar to Erv1p and rat ALR protein
YBR015C	MNN2______	+1.07	487210	522402	protein glycosylation	Golgi alpha-1,2-mannosyltransferase (putative)
YCL038C	__________	-1.32	50620	38376	unknown	unknown
YDR257C	RMS1______	-1.02	225445	220697	transcription	(putative) transcriptional regulator
YEL037C	RAD23_____	+1.19	373044	442384	DNA repair, nucleotide excision	ubiquitin-like protein
YFR054C	__________	-1.30	55760	42944	unknown	unknown
YGR055W	MUP1______	+2.44	445247	1086164	transport	methionine permease
YIR042C	__________	+1.31	151763	198438	unknown	unknown
YJR101W	__________	-1.30	61298	47124	unknown	unknown; similar to superoxide dismutase
YKR098C	UBP11_____	+1.57	100713	158216	protein degradation, ubiquitin-mediated	ubiquitin-specific protease
YLR253W	__________	+1.16	155128	180444	unknown	unknown; similar to Abc1p
YML121W	GTR1______	+1.28	224453	287965	phosphate transport	GTP-binding protein
YNL036W	NCE103____	+2.35	243523	572806	secretion, non-classical	unknown
YNR077C	__________	-1.05	33319	31830	unknown	unknown
YOR154W	__________	+1.16	155677	179812	unknown	unknown
YPL132W	COX11_____	-1.35	174134	128761	respiration	cytochrome-c oxidase assembly
YAL047C	SPC72_____	-1.09	111359	102021	cytoskeleton	spindle pole body component
YBR215W	HPC2______	-1.18	74290	62846	transcription	regulator of histone transcription
YDR086C	SSS1______	-1.33	725048	546001	secretion	ER protein translocation complex subunit
YDR453C	__________	-1.16	150847	129713	unknown	unknown; similar to Tsa1p
YER145C	FTR1______	+1.38	355989	491461	transport	iron permease
YGL146C	__________	-1.04	58818	56524	unknown	unknown; similar to Bunyamwera virus RNA-directed RNA
YGR253C	PUP2______	+1.12	966950	1085390	protein degradation	20S proteasome subunit(alpha5)
YIL049W	DFG10_____	+1.32	125189	164931	filamentous growth	unknown
YJL147C	__________	+1.32	123975	163431	unknown	unknown
YKL143W	LTV1______	-1.28	522295	406990	unknown	unknown; required for viability at low temperature
YLR077W	__________	+1.11	95024	105369	unknown	unknown
YLR447C	VMA6______	-1.09	1481281	1353723	vacuolar acidification	vacuolar H+-ATPase V0 domain 36 KD subunit
YMR180C	CTL1______	+2.29	145796	333560	unknown	RNA triphosphatase
YNL238W	KEX2______	-1.01	47650	47173	secretion	late Golgi endoproteinase
YOL142W	RRP40_____	-1.09	502865	460106	rRNA processing	exosome complex component
YOR352W	__________	+1.01	141290	143186	unknown	unknown
YPR049C	__________	+1.57	384339	603430	unknown	unknown
YBR027C	__________	-1.80	67309	37395	unknown	unknown
YCL050C	APA1______	-1.37	212783	155549	purine metabolism	ATP adenylyltransferase I
YDL144C	__________	+1.14	412049	468947	unknown	unknown
YDR265W	PEX10_____	-1.28	108216	84536	peroxisome biogenesis	integral membrane protein
YEL049W	PAU2______	+2.16	166998	360455	unknown	unknown; similar to members of the Srp1p/Tip1p family
YGR067C	__________	-1.12	63450	56671	unknown	unknown
YHR081W	__________	-1.50	467905	312395	unknown	unknown
YJR113C	__________	+1.42	388872	553691	protein synthesis	ribosomal protein, mitochondrial S7 (putative)
YLR262C	YPT6______	-1.23	224961	183065	secretion	GTP-binding protein, rab family
YNL048W	ALG11_____	-1.13	235219	207272	protein glycosylation	unknown
YOR166C	__________	+1.07	145457	155988	unknown	unknown
YPL144W	__________	+1.21	69392	83795	unknown	unknown
YAL061W	__________	+1.14	83428	94951	unknown	unknown; similar to alcohol/sorbitol dehydrogenase
YBR227C	MCX1______	-1.13	130213	115278	protein folding	chaperone, mitochondrial (putative)
YDR098C	GRX3______	-1.03	702584	684019	oxidative stress response	glutaredoxin
YDR465C	RMT2______	-1.24	301278	243433	arginine metabolism	arginine methyltransferase
YER155C	BEM2______	-1.70	52288	30813	bud emergence	GTPase-activating protein for Rho1p
YGL158W	RCK1______	+1.05	54457	57149	unknown	protein kinase
YGR265W	__________	+1.81	129636	234063	unknown	unknown
YIL061C	SNP1______	+1.45	131462	191268	mRNA splicing	U1 snRNP protein
YJL159W	HSP150____	+2.30	6963141	16031515	heat shock response	secreted glycoprotein of HSP family
YKL155C	__________	+1.37	365921	500676	unknown	unknown
YLR089C	__________	+1.04	436894	456232	unknown	unknown; similar to alanine aminotransferase
YLR459W	CDC91_____	+1.32	66171	87385	unknown	unknown; major facilitator superfamily
YMR192W	__________	+1.82	113384	206845	unknown	unknown; similar to mouse Tbc1 protein
YNL250W	RAD50_____	+1.19	60631	72243	DNA repair	DNA binding protein
YOL154W	__________	+2.35	87643	206109	unknown	unknown; similar to Sartorya fumigata Asp FII
YOR364W	__________	+1.05	61602	64451	unknown	unknown
YPR061C	__________	+1.21	84679	102864	unknown	unknown; similar to E. coli DnaJ and other DnaJ-like
YBR039W	ATP3______	+1.07	1017939	1087255	ATP synthesis	mitochondrial F1F0 ATP synthase subunit
YCL062W	__________	-1.63	184914	113597
YDL156W	__________	+1.07	57582	61519	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YDR277C	MTH1______	+1.94	68784	133183	hexose transport	transcriptional repressor
YEL060C	PRB1______	+8.75	208154	1820403	protein degradation	vacuolar protease B
YGR079W	__________	-1.09	418955	385683	unknown	unknown
YHR093W	AHT1______	-1.16	68005	58717	unknown	unknown
YJR125C	ENT3______	+1.38	445234	612440	endocytosis (putative)	unknown; epsin homolog
YLR273C	PIG1______	+1.02	69858	71062	glucose repression	(putative) Glc7p regulatory subunit
YMR012W	CLU1______	-1.21	1246508	1033147	protein synthesis	translation initiation factor eIF3 subunit
YNL058C	__________	+1.38	726785	1005000	unknown	unknown
YOR178C	GAC1______	+1.30	91913	119383	glycogen metabolism	Glc7p regulatory subunit
YPL156C	__________	+1.55	202254	314128	unknown	unknown
YAR007C	RFA1______	+1.17	126784	148271	DNA replication	replication factor A, 69 kD subunit
YBR239C	__________	+1.29	146091	187984	unknown	unknown; similar to transcription factors, has Zn[2]-Cys[6]
YDR108W	GSG1______	+1.08	121742	130939	meiosis	unknown
YDR477W	SNF1______	+1.28	223703	285918	glucose derepression	protein kinase
YER165W	PAB1______	+1.19	2555629	3043304	mRNA 3'-end processing	cleavage/polyadenylation factor CF IA component
YGL170C	__________	-1.22	135641	110828	unknown	unknown; similar to phosphoribulokinase precursor
YGR277C	__________	+1.13	337565	382380	unknown	unknown; similar to Ctr1p
YIL071C	__________	+1.31	140965	184393	unknown	unknown
YJL171C	__________	+3.76	271644	1022152	unknown	unknown
YKL167C	MRP49_____	-1.37	200049	146213	protein synthesis	ribosomal protein, mitochondrial large subunit
YLR101C	__________	-1.20	732498	612014	unknown	unknown
YMR203W	TOM40_____	+1.10	627674	689986	mitochondrial protein targeting	outer membrane translocase component
YNL262W	POL2______	-1.13	60052	52970	DNA replication	polymerase epsilon catalytic subunit
YOL166C	__________	+1.05	59215	62442	unknown	unknown
YOR376W	__________	+1.01	54267	54570	unknown	unknown; similar to Na+/K+-exchanging ATPases
YPR073C	LTP1______	-1.21	460014	379682	unknown	protein phosphatase
YBR051W	__________	-1.13	47954	42439	unknown	unknown
YCLX01W	__________	-1.34	344265	256493
YDL168W	SFA1______	+1.12	694700	775472	formaldehyde metabolism	long-chain alcohol dehydrogenase
YDR289C	RTT103____	-1.00	174060	173643	transposition (putative)	unknown; similar to Spt8p
YEL072W	__________	+1.07	99162	106182	unknown	unknown
YGR091W	PRP31_____	+1.06	140290	148823	mRNA splicing	U4/U6, U5 snRNP protein
YHR105W	__________	-1.08	67909	62896	unknown	unknown; similar to Grd19p and bacterial helix-turn-helix
YJR137C	ECM17_____	+1.23	152665	188162	cell wall biogenesis	unknown
YLR285W	__________	-1.61	378694	235145	unknown	unknown
YMR024W	MRPL3_____	-1.55	340455	220010	protein synthesis	ribosomal protein, mitochondrial L3
YNL070W	TOM7______	-1.24	161056	129888	mitochondrial protein targeting	small subunit of translocase
YOR190W	SPR1______	-1.00	125115	124701	sporulation	exo-1,3-beta-glucanase
YPL168W	__________	-1.21	106880	88652	unknown	unknown
YAR029W	__________	+1.00	39091	39199	unknown	unknown; similar to subtelomerically-encoded proteins
YBR251W	MRPS5_____	-1.27	179298	141118	protein synthesis	ribosomal protein, mitochondrial S5
YDR120C	TRM1______	-1.21	424505	349768	tRNA processing	tRNA methyltransferase
YDR489W	__________	-1.21	111626	91993	unknown	unknown
YER175C	__________	+1.23	136031	167973	unknown	unknown; similar to Yhr209p
YGL182C	__________	-1.44	53617	37195	unknown	unknown
YGR289C	MAL11_____	+1.14	57082	65282	transport	alpha-glucoside permease
YJL183W	MNN11_____	-1.15	568855	494033	unknown	mannosyltransferase complex subunit
YKL179C	__________	+1.51	140175	211923	unknown	unknown; similar to kinesin and human kinesin-related
YLR113W	HOG1______	+1.30	530407	690236	signaling, high osmolarity pathway	MAPK (mitogen-activated protein kinase)
YMR215W	__________	-1.24	251339	202819	unknown	unknown; similar to Gas1p
YNL274C	__________	+1.59	147183	234444	unknown	putative alpha-ketoisocaproate reductase
YOR012W	__________	+1.25	62004	77656	unknown	unknown
YOR388C	FDH1______	+1.63	86851	141464	unknown	unknown; similar to formate dehydrogenases
YPR085C	__________	+1.22	233344	284849	unknown	unknown
YBR063C	__________	+1.12	143230	160095	unknown	unknown; similar to phosphopanthethein-binding proteins
YCR001W	__________	-1.04	48022	46187	unknown	unknown
YDL180W	__________	+1.23	242498	299163	unknown	unknown
YDR301W	CFT1______	-1.30	80208	61695	mRNA 3'-end processing	cleavage/polyadenylation factor CF II component
YER006W	__________	-1.03	1336776	1299685	unknown	unknown; similar to mouse Mmr1p protein
YGR103W	__________	-1.41	1561224	1104895	unknown	unknown
YHR117W	TOM71_____	-1.30	568252	438181	mitochondrial protein targeting	outer membrane translocase component
YJR149W	__________	+1.32	99910	131636	unknown	unknown; similar to 2-nitropropane dioxygenase
YLR296W	__________	-1.03	46915	45468	unknown	unknown
YMR035W	IMP2______	+1.63	94096	153584	protein processing	mitochondrial inner membrane protease
YNL082W	PMS1______	+1.04	123084	127465	DNA repair	MutL homolog; mismatch repair
YOR200W	__________	-1.50	303715	202305	unknown	unknown
YPL180W	__________	-1.17	68162	58454	unknown	unknown
YBL002W	HTB2______	-1.22	129827	106065	chromatin structure	histone H2B
YBR263W	SHM1______	-1.11	455419	408841	one-carbon interconversion	serine hydroxymethyltransferase
YDL002C	NHP10_____	-1.16	356803	307334	chromatin structure	non-histone protein
YDR132C	__________	-1.16	254642	218862	unknown	unknown
YDR501W	PLM2______	+2.05	172757	353796	plasmid maintenance (putative)	unknown
YFL-TYB	TY2B______	+1.03	15625084	16038613
YGL194C	HOS2______	-2.01	251953	125173	chromatin structure	putative histone deacetylase
YIL093C	__________	-1.21	207586	171481	unknown	unknown
YJL195C	__________	-1.46	79137	54382	unknown	unknown
YKL191W	DPH2______	-1.21	541168	446281	diphthamide biosynthesis	unknown
YLR125W	__________	+1.06	46618	49569	unknown	unknown
YML002W	__________	+1.62	120077	194694	unknown	unknown
YMR227C	TAF67_____	+1.35	159921	215631	transcription	TFIID 67 kD subunit
YOR024W	__________	+1.59	106471	169733	unknown	unknown
YPL002C	SNF8______	+1.46	220254	322253	glucose derepression	unknown
YPR097W	__________	+1.17	379913	443208	unknown	unknown
YBR075W	__________	-1.25	413477	329549	unknown	unknown
YCR013C	__________	-1.18	12868294	10881037	unknown	unknown
YDL192W	ARF1______	-1.19	3731144	3134824	secretion	ADP-ribosylation factor
YDR313C	PIB1______	-1.18	249876	212196	signaling	phosphatidylinositol(3)-phosphate binding
YER015W	FAA2______	-1.10	143834	130336	fatty acid metabolism	acyl-CoA synthetase
YGL002W	ERP6______	-1.18	175168	148049	membrane trafficking; secretion (putative)	unknown
YGR113W	DAM1______	-1.02	104439	102029	unknown	unknown; interacts with Duo1p and Mps1p
YHR129C	ARP1______	-1.07	164593	154196	cytoskeleton	actin-related protein
YJL002C	OST1______	+1.08	450662	488761	protein glycosylation	oligosaccharyltransferase complex subunit
YKL002W	__________	+1.07	345191	368789	unknown	unknown
YLL002W	REM50_____	-1.18	99040	83746	diepoxybutane and mitomycin C resistance	unknown
YLR308W	CDA2______	-1.70	48697	28627	sporulation	chitin deacetylase
YMR046C	__________	+1.90	4797226	9094497	unknown	unknown
YNL094W	__________	+1.88	257980	485408	unknown	unknown
YOL002C	__________	-1.15	520392	452428	unknown	unknown
YOR212W	STE4______	-1.18	382277	323246	signaling, pheromone pathway	beta subunit of G protein
YPL191C	__________	+1.52	92183	140469	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YAR052C	__________	+1.99	108997	217331
YBL012C	__________	-1.26	68614	54501	unknown	unknown
YBR275C	RIF1______	-1.11	138670	125349	silencing	RAP1-interacting protein
YDL014W	NOP1______	-1.43	4288091	3007169	rRNA processing, 35S	fibrillarin homolog
YDR144C	MKC7______	-1.51	521560	344781	protein degradation	periplasmic aspartyl protease
YDR513W	TTR1______	-1.11	444281	401517	electron carrier	glutaredoxin
YFL011W	HXT10_____	+1.09	110633	120370	transport	hexose permease
YGL206C	CHC1______	-1.71	45455	26538	endocytosis and secretion	clathrin heavy chain
YHL010C	__________	-1.59	49293	30928	unknown	unknown
YIL104C	__________	-1.25	1143445	913561	unknown	unknown
YJL207C	__________	-2.56	50619	19791	unknown	major facilitator superfamily
YKL203C	TOR2______	-1.76	46267	26260	signaling, cell cycle, meiosis and actin cytoskeleton organization	phosphatidylinositol 3-kinase
YLR137W	__________	-1.19	77568	65256	unknown	unknown
YMR239C	RNT1______	-1.09	161538	147779	rRNA processing	ribonuclease III
YNL296W	__________	+1.28	49725	63637	unknown	unknown
YOR036W	PEP12_____	+3.62	258416	935777	vacuolar protein targeting	t-SNARE
YPL014W	__________	+1.40	267176	372957	unknown	unknown
YPR109W	__________	+1.13	182032	205715	unknown	unknown
YBR086C	IST2______	-1.03	477617	464304	salt tolerance (putative)	unknown; similar to calcium and sodium channel proteins
YCR024C	__________	+1.08	102558	110258	protein synthesis	tRNA synthetase, mitochondrial, asparaginyl
YDL204W	__________	-1.15	56513	49171	unknown	unknown
YDR323C	PEP7______	-1.20	105588	87868	vacuolar protein targeting	vacuolar segregation protein
YER026C	CHO1______	-1.14	403440	352579	phospholipid metabolism	phosphatidylserine synthase
YGL014W	__________	-1.07	443278	415158	aging	Sir3p and Sir4p localization
YGR125W	__________	+1.22	274226	335119	unknown	unknown; sulfate permease family
YJL014W	CCT3______	+1.07	993830	1060560	protein folding	cytoplasmic chaperonin complex
YKL013C	ARC19_____	+1.69	446947	754160	cytoskeleton	cortical actin patch integrity
YLL014W	__________	-1.31	128263	97973	unknown	unknown
YLR319C	BUD6______	+1.28	120953	154575	bud site selection, bipolar	actin-interacting protein
YMR056C	AAC1______	+2.54	76091	192986	transport	mitochondrial ADP/ATP translocator
YNL106C	INP52_____	+1.27	886101	1125436	endocytosis (putative)	inositol polyphosphate 5-phosphatase
YOL014W	__________	-1.65	163420	98757	unknown	unknown
YOR224C	RPB8______	-1.51	1235146	818047	transcription	shared subunit of RNA polymerase I,II, and III
YPL203W	PKA3______	+1.37	226518	309219	signaling, nutrient control of cell growth	cAMP-dependent protein kinase catalytic subunit
YAR074C	__________	+1.13	1104042	1249933
YBL024W	NCL1______	-1.32	636810	482199	unknown	unknown; similar to human proliferating cell nucleolar antigen
YBR287W	__________	+1.48	377627	560041	unknown	unknown
YDL026W	__________	+1.46	66771	97308	unknown	unknown
YDR156W	RPA14_____	+1.06	295972	312557	transcription	RNA polymerase I subunit A14
YDR525W	__________	-1.08	64339	59616	unknown	unknown
YFL020C	PAU5______	+2.01	186043	374402	unknown	unknown; similar to members of the Srp1p/Tip1p family
YGL218W	__________	+1.83	107586	196849	unknown	unknown
YHL022C	SPO11_____	+1.18	60001	71042	meiosis, recombination	ds break formation complex catalytic subunit
YIL116W	HIS5______	+1.11	269425	298926	histidine biosynthesis	histidinol-phosphate aminotransferase
YJL219W	HXT9______	+2.18	99006	216224	transport	hexose permease
YKL215C	__________	+1.53	121290	186037	unknown	unknown; similar to Pseudomonas hydantoinases hyuA-hyuB
YLR149C	__________	+1.85	61200	113382	unknown	unknown
YML023C	__________	+1.10	120094	132484	unknown	unknown
YNL308C	KRI1______	-1.09	857769	784308	unknown	unknown; similar to Mgm1p
YOR048C	RAT1______	+1.09	747363	811155	transcription	exonuclease II
YPL026C	SKS1______	+1.17	286284	334299	glucose transport (putative)	protein kinase
YPR121W	THI22_____	+1.33	98050	130864	thaimine metabolism	unknown
YBR097W	VPS15_____	-1.83	78521	42803	vacuolar protein targeting	ser/thr protein kinase
YCR034W	FEN1______	-1.37	552941	403079	cell wall biogenesis	beta-1,3-glucan synthase subunit
YDL216C	__________	-1.03	103442	100177	unknown	unknown
YDR335W	MSN5______	+1.35	159096	214375	signaling	pheromone pathway
YER038C	__________	+1.04	168901	174985	unknown	unknown
YGL026C	TRP5______	+1.53	706776	1083997	tryptophan biosynthesis	tryptophan synthase
YGR137W	__________	+2.28	628743	1434151	unknown	unknown; similar to tomato extensin PIR:S14983
YHR150W	__________	+1.28	90563	115944	unknown	unknown
YJL026W	RNR2______	+2.77	1040277	2884921	DNA replication	ribonucleotide reductase
YKL025C	PAN3______	+1.20	200824	240437	mRNA processing	Pab1p-dependent poly(A) ribonuclease subunit
YLL026W	HSP104____	+5.58	192729	1076261	heat shock response /thermotolerance	heat shock protein
YLR331C	__________	+2.90	85648	248002	unknown	unknown
YMR068W	__________	+1.86	78787	146340	unknown	unknown; similar to mouse I kappa B gamma and p70
YNL118C	DCP2______	+1.40	182451	255157	respiration (putative)	unknown; suppresses pet mutant
YOL026C	__________	+1.41	236877	333331	unknown	unknown
YOR236W	DFR1______	-1.07	313207	292217	folate biosynthesis	dihydrofolate reductase
YPL215W	CBP3______	+1.07	285492	306660	respiration	cytochrome-c reductase assembly
YER187W	__________	+1.22	73902	90265	unknown	unknown; similar to killer toxin Khs1p
YBL036C	__________	-1.08	373564	347278	unknown	unknown; similar to Pseudomonas aeroginosa twitching motility protein
YBR299W	MAL32_____	+1.93	117567	226954	maltose metabolism	alpha-glucosidase
YDL038C	__________	+1.56	201560	314954	unknown	unknown
YDR168W	CDC37_____	+1.06	485687	516136	cell cycle	chaperone
YDR537C	__________	+1.00	140354	141040	unknown	unknown
YFL031W	HAC1______	+3.06	67024	204758	unfolded protein response	transcription factor
YGL229C	SAP4______	-1.26	79657	63429	cell cycle	Sit4p-associated protein
YHL033C	RPL8A_____	-1.30	8468367	6493102	protein synthesis	ribosomal protein L8A
YIL128W	MET18_____	-1.16	217336	187755	transcription and DNA repair	regulator of TFIIH
YJR007W	SUI2______	+1.03	1464776	1514625	protein synthesis	translation initiation factor eIF-2 alpha subunit
YKR002W	PAP1______	+1.09	247907	269234	mRNA polyadenylation	poly(A) polymerase
YLR159W	__________	+1.10	53666	59081	unknown	unknown
YMR263W	__________	-1.11	239841	216763	unknown	unknown
YNL320W	__________	+1.31	199905	262467	unknown	unknown; similar to S. pombe bem1/bud5 suppressor (Bem46+)
YOR060C	__________	+1.33	79337	105392	unknown	unknown
YPL038W	MET31_____	-1.03	163851	158535	sulfur amino acid metbolism	transcription factor
YPR133C	__________	-1.01	576155	572509	unknown	unknown
YBR109C	CMD1______	+1.39	869730	1211254	signaling	calmodulin
YCR046C	IMG1______	-1.01	317285	312854	protein synthesis	ribosomal protein, mitochondrial
YDL228C	__________	-1.54	61247	39714	unknown	unknown; similar to Achlya klebsiana glutamate
YDR347W	MRP1______	+1.00	370687	372038	protein synthesis	ribosomal protein, mitochondrial small subunit
YER047C	SAP1______	+1.32	118019	156168	mating type switching	AAA family protein
YGL038C	OCH1______	+1.59	265670	422601	protein glycosylation	membrane-bound mannosyltransferase
YGR149W	__________	+2.43	137751	334654	unknown	unknown; similar to hypothetical protein A-288
YHR162W	__________	-1.18	2471132	2094258	unknown	unknown
YJL038C	__________	+1.60	107227	171566	unknown	unknown
YKL036C	__________	+1.04	89861	93786	unknown	unknown
YLL038C	ENT4______	+1.06	71765	76020	endocytosis (putative)	unknown; epsin homolog
YLR343W	__________	+1.69	93509	157956	unknown	unknown; similar to Gas1p
YNL130C	CPT1______	-1.09	372893	342641	phospholipid metabolism	diacylglycerol cholinephosphotransferase

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YOL038W	PRE6______	+1.11	1243585	1381622	protein degradation	20S proteasome subunit (alpha4)
YOR248W	__________	+1.13	2087303	2351427	unknown	unknown
YPL227C	ALG5______	-1.53	551132	361342	protein glycosylation	UDP-glucose:dolichyl-phosphate glucosyltransferase
YBL048W	__________	+1.84	52489	96607	unknown	unknown
YDL050C	__________	-1.43	442653	308597	unknown	unknown
YDR178W	SDH4______	+1.95	257219	501377	TCA cycle, oxidative phosphorylation	succinate dehydrogenase anchor subunit
YFL041W	FET5______	+1.43	152254	218202	transport	iron transporter, multicopper oxidase
YGL241W	KAP114____	+1.08	150459	161842	nuclear protein targeting	karyopherin
YHL045W	__________	+1.56	71357	111430	unknown	unknown
YIL140W	SRO4______	+2.63	235819	620102	bud site selection, axial	unknown; plasma membrane protein
YJR018W	__________	+1.71	278072	476609	unknown	unknown
YKR014C	YPT52_____	-1.12	410232	367226	endocytosis	GTP-binding protein, rab family
YLR171W	__________	+1.47	155996	229386	unknown	unknown
YMR275C	BUL1______	+1.65	147061	242267	protein degradation, ubiquitin-mediated	unknown; binds Rsp5p ubiquitin ligase
YNL332W	THI12_____	+2.85	128985	367529	pyrimidine biosynthesis	unknown
YOR072W	__________	+1.08	64504	69563	unknown	unknown
YPL050C	MNN9______	-1.02	674126	659843	protein glycosylation	mannosyltransferase complex subunit
YPR143W	__________	-1.23	575508	467597	unknown	unknown
YBR120C	CBP6______	-1.38	125567	90736	protein synthesis, COB	translation activator of COB mRNA
YCR058C	__________	-1.37	49986	36412
YDL240W	LRG1______	-1.06	92127	86746	sporulation	GTPase-activating protein of the rho/rac family
YDR359C	VID21_____	+1.16	442184	513284	vacuolar protein targeting (putative)	unknown
YER058W	PET117____	-1.77	132159	74752	respiration	cytochrome c oxidase assembly factor
YGL050W	__________	-1.54	119190	77640	unknown	unknown
YGR161C	__________	+5.11	184659	944212	unknown	unknown
YHR174W	ENO2______	+1.21	13152857	15912714	glycolysis	enolase II
YJL051W	__________	+1.94	298857	578353	unknown	unknown
YKL048C	ELM1______	+1.00	527309	529555	pseudohyphal growth	protein kinase
YLL050C	COF1______	-1.25	241551	192610	cytoskeleton	cofilin
YLR355C	ILV5______	-1.75	4739899	2706578	isoleucine and valine biosynthesis	ketol-acid reductoisomerase
YMR090W	__________	+1.24	214865	266708	unknown	unknown; similar to malate dehydrogenases
YNL142W	MEP2______	-1.65	628237	381075	transport	ammonia permease
YOL050C	__________	+1.34	270302	363204	unknown	unknown
YOR260W	GCD1______	+1.22	505505	615534	protein synthesis	translation initiation factor eIF2b gamma subunit
YPL239W	YAR1______	-1.06	816040	766340	unknown	unknown
YJR161C	COS5______	+3.19	684204	2184745	unknown	unknown; similar to subtelomerically-encoded proteins
YBL060W	__________	+1.02	149651	152926	unknown	unknown
YDL062W	__________	+1.19	83789	99462	unknown	unknown
YDR189W	SLY1______	-1.20	383454	319338	secretion	SNARE docking complex subunit
YFL053W	DAK2______	+1.12	79852	89721	carbohydrate metabolism; stress response	dihydroxyacetone kinase
YGL253W	HXK2______	+2.53	2622084	6641275	glycolysis	hexokinase II
YHR005C	GPA1______	+1.09	1020351	1113819	signaling, pheromone pathway	alpha subunit of G protein coupled to mating factor
YIL152W	__________	+1.96	293651	576051	unknown	unknown
YJR029W	__________	+1.03	15653070	16168699	unknown	unknown; similar to malate dehydrogenase
YKR026C	GCN3______	-1.34	3900896	2901538	protein synthesis	translation initiation factor EIF2B
YLR183C	__________	-1.31	601920	459166	unknown	unknown
YML054C	CYB2______	+1.95	146496	286200	lactate utilization	cytochrome b2
YMR287C	MSU1______	+1.24	121014	150109	mitochondrial biogenesis	component of 3'-5' exonuclease complex
YNR005C	__________	+2.07	82824	171622	unknown	unknown
YOR084W	__________	+1.59	160685	255805	unknown	unknown
YPL060W	__________	+1.94	130713	253528	unknown	unknown; similar to Mrs2p
YPR155C	NCA2______	+1.64	115183	189467	ATP synthesis	regulates Atp6p and Atp8p synthesis
YBR132C	AGP2______	+1.67	79078	132414	transport	general amino acid permease
YCR069W	SCC3______	+1.54	168336	258779	protein folding	peptidyl-prolyl cis-trans isomerase
YDR004W	RAD57_____	+1.11	183920	203670	DNA repair and recombination	RecA homolog
YDR369C	XRS2______	+1.08	121862	132052	DNA repair and recombinations	required for ds break repair
YGL062W	PYC1______	+2.22	293211	650817	TCA cycle	pyruvate carboxylase 1
YGR169C	__________	-1.05	198195	189372	unknown	unknown
YHR186C	__________	+1.66	202274	336425	unknown	unknown; similar to Cdc39p, has WD (WD-40) domain
YJL063C	MRPL8_____	-1.19	428764	360415	protein synthesis	ribosomal protein, mitochondrial L8
YKL060C	FBA1______	-1.01	15665969	15435060	glycolysis	aldolase
YLL062C	MHT1______	-1.44	519708	360788	sulfur amino acid metabolism	S-methylmethionine:homocysteine S-methyltransferase
YLR367W	RPS22B____	-2.10	4523172	2150849	protein synthesis	ribosomal protein S22B
YMR102C	__________	-1.13	87321	77167	unknown	unknown
YNL154C	YCK2______	+1.22	671058	815506	unknown	protein kinase
YOL060C	AMI3______	+2.04	82744	168672	mitochondrial morphology (putative)	unknown
YOR272W	YTM1______	+1.25	497193	619207	cytoskeleton (putative)	microtubule-associated protein
YPL250C	ICY2______	+1.37	104259	142704	cytoskeleton (putative)	unknown
YMR317W	__________	+1.10	52419	57860	unknown	unknown
YBL072C	RPS8A_____	-1.35	14235206	10562823	protein synthesis	ribosomal protein S8
YDL074C	__________	-1.01	225460	223585	unknown	unknown
YDR201W	SPC19_____	-1.29	221684	171757	cytoskeleton	spindle pole body component
YFL065C	__________	+1.07	192240	206559	unknown	unknown; similar to other subtelomerically-encoded proteins
YGR002C	__________	+1.43	162935	233613	unknown	unknown; similar to Drosophila melanogaster transcription
YHR016C	YSC84_____	+1.80	135248	242868	unknown	unknown; similar to hypothetical protein YFR024c-a
YIL163C	__________	+1.47	92742	136759	unknown	unknown
YJR041C	__________	+1.76	118221	207993	unknown	unknown; similar to Podospora anserina NADH dehydrogenase
YKR038C	__________	+1.39	429385	597482	unknown	unknown; similar to Qri7p and Pasteurella haemolytica
YLR195C	NMT1______	+1.75	214990	376364	protein processing	N-myristoyltransferase
YML065W	ORC1______	+1.13	176596	199566	DNA replication	origin recognition complex 104 kD subunit
YMR297W	PRC1______	+1.99	809357	1607511	sporulation	carboxypeptidase Y
YNR017W	MAS6______	+1.08	689749	746085	mitochondrial protein targeting	inner membrane translocase component
YOR096W	RPS7A_____	-1.53	7345171	4795338	protein synthesis	ribosomal protein S7A
YPL072W	UBP16_____	-1.01	177320	175389	protein degradation, ubiquitin-mediated	putative deubiquitinating enzyme
YPR163C	TIF3______	-1.09	2688008	2465284	protein synthesis	translation initiation factor eIF4B
YBR144C	__________	-1.39	39088	28080	unknown	unknown
YCR082W	__________	+1.34	285718	383166	unknown	unknown
YDR016C	DAD1______	-1.56	132451	85073	unknown	unknown; localizes to spindles and spindle pole bodies
YDR381W	YRA1______	-1.33	911714	688039	mRNA processing	RNA annealing protein
YER078C	__________	-1.21	146479	121367	unknown	unknown; similar to E. coli X-Pro aminopeptidase II
YGL074C	__________	-1.10	42689	38902	unknown	unknown
YGR181W	TIM13_____	-1.13	356844	316013	mitochondrial protein targeting	inner membrane translocase subunit
YHR198C	__________	+1.31	159236	209052	unknown	unknown; similar to Yhr199p
YJL075C	__________	+1.26	366370	462613	unknown	unknown
YKL072W	STB6______	+1.38	121636	167389	unknown	binds Sin3p
YLR007W	__________	+1.09	400233	437118	unknown	unknown
YLR379W	__________	+2.34	143089	334936	unknown	unknown
YMR114C	__________	+1.05	136430	143188	unknown	unknown
YNL166C	BNI5______	-1.11	418947	375800	unknown	unknown; localizes to mother-bud neck
YOL072W	__________	+1.17	173981	203985	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YOR284W	__________	-1.02	110735	108298	unknown	unknown
YPL260W	__________	+1.03	538347	557123	unknown	unknown
YBL084C	CDC27_____	-1.10	41965	38244	cell cycle	anaphase-promoting complex subunit
YDL086W	__________	+1.56	457676	713478	unknown	unknown
YFR009W	GCN20_____	-1.09	45343	41697	protein synthesis	activator of Gcn2p kinase; ABC superfamily
YGR014W	MSB2______	+3.28	350017	1149083	bud emergence	unknown
YHR027C	RPN1______	+1.73	449483	775565	protein degradation	26S proteasome regulatory subunit
YIL174W	__________	+1.52	83945	127304	unknown	unknown; similar to Yir040p
YJR053W	BFA1______	+1.57	61217	96270	unknown	unknown
YKR050W	TRK2______	+1.19	57432	68135	transport	potassium permease
YLR207W	HRD3______	+1.39	92261	128598	protein degradation	HMG-CoA reductase degradation
YML077W	BET5______	-1.14	256769	225933	secretion (putative)	unknown; suppresses bet3 mutation
YMR307W	GAS1______	-27.00	4546557	168421	unknown	cell surface glycoprotein
YNR029C	__________	-1.15	304787	265561	unknown	unknown; similar to Rhodococcus sp. nitrile hydratase
YOR108W	__________	-1.04	1175242	1127769	unknown	unknown; similar to Leu4p
YPL084W	BRO1______	+1.41	327281	462639	unknown	unknown
YPR175W	DPB2______	-1.11	114268	102545	DNA replication	polymerase epsilon 80 kDa subunit
YBR156C	SLI15_____	+1.15	182560	209563	mitosis, chromosome segregation	unknown
YCR093W	CDC39_____	-1.13	318727	283047	transcription	general negative regulator
YDR028C	REG1______	+1.64	199930	328055	glucose repression	protein phosphatase regulator
YDR393W	SHE9______	-1.23	196751	160182	unknown	unknown
YER089C	PTC2______	+1.37	516046	705247	unknown	protein phosphatase
YGL086W	MAD1______	-1.75	518383	295509	cell cycle	spindle checkpoint complex subunit
YGR193C	PDX1______	-1.18	515826	435674	glycolysis	pyruvate dehydrogenase
YHR210C	__________	-1.38	147276	106347	unknown	unknown; similar to Gal10p, has strong similarity to
YJL087C	TRL1______	-1.18	262118	222467	tRNA splicing	tRNA ligase
YKL084W	__________	+1.02	145479	148195	unknown	unknown
YLR019W	PSR2______	+1.46	225059	329460	salt tolerance (putative)	phosphatase
YLR390W	SSR1______	-1.20	1827352	1521015	unknown	secretory stress response
YMR125W	STO1______	+1.10	144955	158955	glycolysis	large subunit of the nuclear CAP-binding protein complex
YNL178W	RPS3______	-1.47	10557960	7176404	protein synthesis	ribosomal protein S3
YOL084W	__________	-1.27	84055	66098	unknown	major facilitator superfamily
YOR296W	__________	+1.01	68417	69380	unknown	unknown; may be involved in bud site selection (YPD)
YPL272C	__________	+1.73	94800	164097	unknown	unknown
YAL003W	EFB1______	-1.56	5951915	3819470	protein synthesis	translation elongation factor EF1-beta
YBR168W	__________	-1.56	158287	101430	unknown	unknown
YCR105W	__________	+1.06	114143	121464	unknown	unknown; similar to bovine alcohol dehydrogenase
YDR039C	ENA2______	+1.69	181512	307308	transport	plasma membrane ATPase
YDR406W	PDR15_____	+1.51	157005	236458	drug resistance	putative transporter
YER101C	AST2______	+1.04	173628	180288	plasma membrane protein targeting	targets plasma membrane ATPase
YGL099W	__________	-1.29	102162	79260	unknown	unknown; similar to human possible GTP-binding protein HSR1
YGR206W	__________	-1.30	134225	103009	unknown	unknown
YIL003W	__________	-1.13	236063	209821	unknown	unknown; similar to E. coli MRP protein
YJL100W	__________	+2.41	156522	376791	unknown	unknown
YKL097C	__________	-1.45	44922	30885	unknown	unknown
YLR032W	RAD5______	-1.39	39488	28372	DNA repair	DNA helicase
YLR404W	__________	+1.22	107627	131779	unknown	unknown
YMR137C	PSO2______	+1.39	57414	79707	DNA repair	required for interstrand crosslink repair
YNL191W	__________	+1.51	148307	224260	unknown	unknown
YOL097C	WRS1______	-1.56	1464992	940064	protein synthesis	tRNA ligase, tryptophan
YOR307C	SLY41_____	+1.02	330270	338313	secretion	unknown; suppresses ypt1 null
YPR002W	PDH1______	+2.13	90484	192491	proionate metabolism (putative)	unknown; prpD homolog
YBL097W	BRN1______	-1.30	61529	47468	chromosome maintenance	unknown; homolog of human BRRN1
YCL002C	__________	-1.54	99430	64685	unknown	unknown
YDL099W	__________	-1.35	405894	300060	unknown	unknown
YDR222W	__________	+1.20	227997	273532	unknown	unknown
YEL003W	GIM4______	-1.41	304369	215861	protein folding	chaperone; tubulin folding
YFR022W	__________	+1.38	84544	117004	unknown	unknown
YGR027C	RPS25A____	-1.91	8698192	4556400	protein synthesis	ribosomal protein S25A
YHR039C	__________	-5.11	362360	70854	unknown	unknown; similar to aldehyde dehydrogenases
YIR010W	__________	-1.07	198929	186053	unknown	unknown
YJR066W	TOR1______	+1.54	631278	970877	signaling, cell cycle and meiosis	phosphatidylinositol 3-kinase
YKR063C	LAS1______	+1.08	236439	254589	morphogenesis, cytoskeletal assembly, bud formation	(putative) gene expression
YLR220W	CCC1______	-1.26	418601	331413	ion homeostasis, Ca2+ and Mn2+	transmembrane transporter, putative
YML090W	__________	-1.04	56233	54165	unknown	unknown
YNL003C	PET8______	+1.71	252723	431475	mitochondrial protein targeting	mitochondrial carrier family
YNR042W	__________	+1.38	65181	89750	unknown	unknown
YOR121C	__________	+1.35	171864	231645	unknown	unknown
YPL097W	MSY1______	-1.08	181207	167290	protein synthesis	tRNA synthetase, mitochondrial, tyrosyl
YPR188C	MLC2______	+1.10	419850	461677	cytoskeleton	myosin light chain
YAL016W	TPD3______	-1.00	459267	457302	tRNA biosynthesis, cytokinesis, ceramide-mediated signaling	protein phosphatase (PP2A regulatory subunit)
YBR180W	DTR1______	-2.71	137011	50476	sporulation	dityrosine transporter
YCRX10W	__________	-1.30	188833	145302
YDR051C	__________	-1.42	235070	165539	unknown	unknown
YDR418W	RPL12B____	-1.99	9402985	4718765	protein synthesis	ribosomal protein L12B
YER113C	__________	-2.35	422734	179731	unknown	unknown; similar to Emp70p
YGL111W	__________	-1.18	542639	458103	unknown	unknown
YGR218W	CRM1______	+1.16	275899	319165	nuclear protein targeting	nuclear export factor
YIL014W	MNT3______	-1.06	219429	206213	protein glycosylation	mannosyltransferase
YJL112W	MDV1______	+1.18	166732	197066	unknown	unknown
YKL108W	SLD2______	-1.41	118180	83559	DNA replication	unknown; interacts with Dpb11p
YLR042C	__________	+1.68	112021	187833	unknown	unknown
YLR414C	__________	+4.93	805863	3971043	unknown	unknown
YMR149W	SWP1______	-1.05	459037	435946	protein glycosylation	oligosaccharyltransferase complex subunit
YNL203C	__________	+1.43	74899	106741	unknown	unknown; similar to Bacillus subtilis
YOL107W	__________	+1.31	108138	142126	unknown	unknown; similar to Rnh70p and Pan2p
YOR319W	HSH49_____	-1.07	199202	186899	mRNA splicing	U2 snRNP protein; human SAP145 homolog
YPR014C	__________	+1.17	61038	71569	unknown	unknown
YBL107C	__________	+1.00	360937	362112	unknown	unknown
YCL014W	BUD3______	-1.67	84256	50592	cell polarity	bud site selection
YDL111C	RRP42_____	-1.56	584785	374926	rRNA processing	exoribonuclease
YDR234W	LYS4______	-1.29	216612	168193	lysine biosynthesis	homoaconitase
YEL015W	__________	+1.05	246517	258221	unknown	unknown
YGR037C	ACB1______	+1.37	755633	1031490	fatty acid metabolism	acyl-CoA ester transporter
YHR050W	SMF2______	+1.30	189098	245331	transport	(putative) manganese transporter
YJR078W	__________	+3.53	119472	421677	unknown	unknown; similar to indoleamine 2,3-dioxygenase
YKR075C	__________	+1.86	112499	209157	unknown	unknown; similar to Reg1p
YLR230W	__________	+1.15	203429	233879	unknown	unknown
YML100W	TSL1______	+2.04	198441	405540	trehalose metabolism	trehalose-6-phosphate synthase/phosphatase complex regulatory subunit
YNL015W	PBI2______	+1.22	478920	582770	unknown	protease inhibitor

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YNR054C	__________	-1.51	635968	422074	unknown	unknown
YOR133W	EFT1______	+1.02	7153894	7309579	protein synthesis	translation elongation factor eEF2
YPL109C	__________	+1.66	103483	171689	unknown	unknown
YPR200C	ARR2______	-1.18	135327	114995	arsenic resistance	unknown
YAL028A	__________	+1.01	44304	44553
YBR192W	RIM2______	-1.52	57649	37863	transport	mitochondrial carrier family
YDR063W	__________	-1.27	263575	207737	unknown	unknown
YDR430C	__________	-1.01	111447	109863	unknown	unknown; similar to class I family of aminoacyl-tRNA
YER124C	__________	-1.25	310518	248938	unknown	unknown
YGL123W	RPS2______	-1.18	3278364	2777338	protein synthesis	ribosomal protein S2
YGR230W	BNS1______	-1.61	171046	106556	unknown	unknown; similar to Spo12p; bypasses spo12/spo12 deletion
YIL026C	IRR1______	+1.22	107347	130890	unknown	colony morphology
YJL124C	LSM1______	-1.12	390822	350019	mRNA splicing (putative)	similar to snRNA-associated protein
YKL120W	OAC1______	-5.44	1041819	191346	transport	oxaloacetate carrier
YLR054C	__________	+2.59	63859	165249	unknown	unknown
YMR159C	APG16_____	+1.37	60562	83233	autophagy	unknown; interacts with Apg5p and Apg12p; similar to human Sin3 complex component SAP1
YNL215W	__________	+1.09	261982	284730	unknown	unknown
YOL119C	__________	+1.53	284492	436152	unknown	unknown; similar to mammalian monocarboxylate
YOR331C	__________	-1.16	1634094	1412650	unknown	unknown
YPR026W	ATH1______	-1.10	69801	63193	trehalose metabolism	vacuolar acid trehalase
YBR006W	UGA5______	+1.27	94175	120022	GABA metabolism	succinate semialdehyde dehydrogenase
YCL027W	FUS1______	+1.43	85896	122853	mating; cell fusion	SH3 domain protein
YDL123W	__________	+1.92	161567	309934	unknown	unknown
YEL026W	SNU13_____	-1.45	2123159	1459994	mRNA splicing (putative)	U4/U6.U5 snRNP protein
YFR043C	__________	-1.25	209057	166692	unknown	unknown
YGR044C	RME1______	+1.02	301519	308430	meiosis	transcription factor
YHR061C	GIC1______	-1.07	122991	114711	bud emergence	binds Cdc42p
YIR031C	DAL7______	+1.66	152773	252858	allantoin utilization	malate synthase
YJR091C	JSN1______	+2.86	96243	274889	mitosis (putative)	unknown; suppresses tub2-150
YKR087C	__________	+1.42	164047	232733	unknown	unknown; similar to neutral zinc metallopeptidases
YLR242C	ARV1______	+1.03	87229	89959	unknown	unknown; similar to C.elegans R05H5.5 protein and Nup120p
YML111W	BUL2______	+1.51	90501	136834	protein degradation, ubiquitin-mediated (putative)	unknown; similar to Bul1p
YNL027W	CRZ1______	+1.82	481638	878613	(calcineurin) signaling	calcineurin-responsive transcription factor
YNR066C	__________	+2.99	79711	237982	unknown	unknown; similar to Pep1p
YOR143C	THI80_____	-1.16	273422	236312	thiamine metabolism	thiamine pyrophosphokinase
YPL121C	MEI5______	+1.01	61369	61792	meiosis, synapsis and recombination	unknown
YAL037W	__________	+1.18	49725	58850	unknown	unknown
YBR204C	__________	+1.16	76905	89085	unknown	unknown; similar to peroxisomal serine-active lipase
YDR075W	PPH3______	-1.52	205378	134879	cell cycle	protein phosphatase 2A
YDR442W	__________	+1.59	75579	119905	unknown	unknown
YER136W	GDI1______	+1.41	484771	685661	secretion	regulatory; GDP dissociation inhibitor
YGL135W	RPL1B_____	-1.63	9910099	6069481	protein synthesis	ribosomal protein L1B
YGR242W	__________	-2.04	192931	94509	unknown	unknown
YIL038C	NOT3______	-1.15	282157	244911	transcription	general repressor
YJL136C	RPS21B____	-1.63	5335332	3270274	protein synthesis	ribosomal protein S21B
YKL132C	RMA1______	-1.39	136698	98460	unknown; mating (putative)	unknown; similar to folylpolyglutamate synthase
YLR066W	SPC3______	-1.35	485298	360157	secretion	signal peptidase subunit
YLR436C	ECM30_____	+1.71	672699	1151795	cell wall biogenesis	unknown
YMR171C	__________	+1.37	251410	343755	unknown	unknown
YNL227C	__________	+1.37	140064	192282	unknown	unknown; similar to E. coli DnaJ and other DnaJ-like
YOL131W	__________	+1.10	46541	51362	unknown	unknown
YOR343C	__________	+1.19	55589	65883	unknown	unknown
YPR038W	__________	+1.39	166067	231120	unknown	unknown
YBR016W	__________	+2.88	215556	620889	unknown	unknown
YCL039W	__________	-1.22	54438	44480	unknown	unknown
YDL133W	__________	+1.45	198066	287191	unknown	unknown
YDR258C	HSP78_____	+2.70	186512	504083	protein folding	mitochondrial
YEL038W	UTR4______	-1.00	229442	229249	unknown	unknown
YFR055W	__________	+1.56	675765	1052515	unknown	unknown; similar to E. coli cystathionine beta
YGR056W	RSC1______	+1.13	90974	102379	chromatin structure	chromatin remodeling complex subunit
YHR071W	PCL5______	+1.02	676938	688470	cell cycle	cyclin (Pho85p)
YIR043C	__________	+3.38	556571	1883139	unknown	unknown
YJR102C	__________	+1.39	90302	125837	unknown	unknown
YKR099W	BAS1______	+1.33	116715	155560	histidine, adenine biosynthesis	transcription factor
YLR254C	__________	-1.03	182526	176940	unknown	unknown
YML122C	__________	+1.36	68718	93557	unknown	unknown
YNL037C	IDH1______	+1.74	599273	1045717	TCA cycle	isocitrate dehydrogenase
YOR155C	__________	+1.60	234860	376391	unknown	unknown
YPL133C	__________	+1.06	85591	91110	unknown	unknown; similar to transcription factors, has Zn[2]-Cys[6]
YAL048C	__________	+1.34	57827	77364	secretion (putative)	unknown; similar to Ras1p, Ras2p, and other GTP-binding proteins of the RAS superfamily
YBR216C	__________	+1.12	103826	115856	unknown	unknown
YDR087C	RRP1______	-1.67	606991	363637	rRNA processing	unknown
YDR454C	GUK1______	-1.35	1127197	832773	guanine nucleotide metabolism	guanylate kinase
YGL147C	RPL9A_____	-1.64	12694462	7763877	protein synthesis	ribosomal protein L9A
YGR254W	ENO1______	-1.02	15493548	15117806	glycolysis	enolase I
YIL050W	PCL7______	+1.43	414189	593100	cell cycle	cyclin
YJL148W	RPA34_____	-1.17	784755	670068	transcription	RNA polymerase I subunit
YKL144C	RPC25_____	-1.29	454376	352523	transcription	RNA polymerase III 25 kD subunit
YLR078C	BOS1______	-1.06	334785	314750	secretion	ER-to-Golgi v-SNARE
YLR448W	RPL6B_____	-1.46	10421524	7150483	protein synthesis	ribosomal protein L6b
YMR181C	__________	+1.57	268407	420519	unknown	unknown
YNL239W	LAP3______	+1.09	429115	467119	protein degradation	aminopeptidase of cysteine protease family
YOL143C	RIB4______	+1.02	789715	809449	riboflavin biosynthesis	6,7-dimethyl-8-ribityllumazine synthase
YOR353C	__________	+1.81	251695	454769	unknown	unknown; similar to adenylate cyclases
YPR050C	__________	+1.08	248702	268741	unknown	unknown
YBR028C	__________	-1.58	251465	159575	unknown	unknown; similar to Ypk2p/Ykr2p and Ypk1p
YCL051W	LRE1______	-1.31	128324	97679	laminarase resistance	unknown
YDL145C	COP1______	+1.46	845093	1234780	secretion	vesicle coat component
YDR266C	__________	-1.19	320665	269163	unknown	unknown
YEL050C	RML2______	-1.11	315942	284491	protein synthesis	ribosomal protein, mitochondrial L2
YGR068C	__________	+1.41	77843	109577	unknown	unknown; similar to Rod1p
YHR082C	KSP1______	+1.63	129175	211164	unknown	protein kinase
YJR114W	__________	+2.08	165616	344118	unknown	unknown
YMR001C	CDC5______	-1.30	234810	180907	cell cycle	G2/M protein kinase
YNL049C	SFB2______	+1.34	122127	163302	unknown	unknown; similar to Sec24p; binds Sed3p and Sec23p
YOR167C	RPS28A____	-1.49	6626579	4460894	protein synthesis	ribosomal protein S28A
YPL145C	KES1______	+1.66	877181	1455398	sterol metabolism	unknown
YAL062W	GDH3______	+1.43	217859	310801	glutamate biosynthesis	NADP-glutamate dehydrogenase
YBR228W	__________	-1.08	129677	120330	unknown	unknown
YDR466W	__________	+1.27	73986	93844	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YER156C	__________	-1.70	1226217	720120	unknown	unknown
YGL159W	__________	+1.22	153144	186747	unknown	unknown
YGR266W	__________	+1.88	209651	394759	unknown	unknown
YIL062C	ARC15_____	+1.73	476604	823961	cytoskeleton	cortical actin patch integrity
YJL160C	__________	+1.12	75837	84904	unknown	unknown; similar to members of the Pir1p/Hsp150p/Pir3p
YKL156W	RPS27A____	-1.67	2948531	1768632	protein synthesis	ribosomal protein S27A
YLR090W	XDJ1______	+1.24	203875	253384	unknown	unknown; similar to E.coli dnaJ
YLR460C	__________	+1.64	140594	231236	unknown	unknown; similar to Ycr102p
YMR193W	MRPL24____	+1.08	248339	269162	protein synthesis	ribosomal protein, mitochondrial L24
YNL251C	NRD1______	+1.46	85250	124157	transcription	elongation; also mRNA abundance
YOL155C	__________	+2.37	258539	611842	unknown	unknown; similar to S. cerevisiae glucan 1,4-alpha-glucosidase
YOR365C	__________	+1.22	93234	113639	unknown	unknown
YPR062W	FCY1______	-1.18	1118837	946505	pyrimidine metabolism	cytosine deaminase
YBR040W	FIG1______	-1.01	40166	39763	mating	extracellular integral membrane protein
YCL063W	__________	+1.05	82589	86948	unknown	unknown; similar to plant aminocyclopropane-1-carboxylate
YDL157C	__________	-1.26	257601	205099	unknown	unknown
YDR278C	__________	-1.50	55214	36693	unknown	unknown
YEL061C	CIN8______	+2.19	753746	1654443	mitosis, spindle maintenance	kinesin related protein
YGR080W	TWF1______	+1.42	293001	416541	cytoskeleton	twifilin; actin monomer sequestering protein
YHR094C	HXT1______	+1.36	2673239	3635735	transport	hexose permease
YJR126C	__________	+1.47	261087	384209	unknown	unknown; similar to transferrin receptor
YLR274W	CDC46_____	+1.08	200709	216857	DNA replication	MCM initiator complex
YMR013C	SEC59_____	+1.54	155649	239604	protein glycosylation	mannosyltransferase (putative)
YNL059C	ARP5______	+1.57	266243	419320	cytoskeleton (putative)	actin-related protein
YOR179C	__________	+1.24	176913	218510	unknown	unknown
YPL157W	__________	-1.12	221242	197893	unknown	unknown
YAR008W	SEN34_____	-1.56	75005	47972	tRNA splicing	splicing endonuclease subunit
YBR240C	THI2______	-1.06	46605	43791	thiamine biosynthesis	transcription factor
YDR109C	__________	+1.43	126919	182086	unknown	unknown; similar to FGGY kinase family (GB:Z48758)
YDR478W	SNM1______	+1.00	110309	110717	rRNA processing	RNase MRP component
YGL171W	ROK1______	-1.34	542583	404528	rRNA processing	RNA helicase
YGR278W	__________	-1.04	219546	210614	unknown	unknown
YJL172W	CPS1______	+1.96	240493	472362	protein degradation	vacuolar carboxypeptidase yscS
YKL168C	KKQ8______	+1.66	98101	162908	unknown	protein kinase
YLR102C	APC9______	+1.45	68738	99636	cell cycle	anaphase-promoting complex subunit
YMR204C	__________	+1.11	86916	96334	unknown	unknown
YNL263C	YIF1______	-1.26	400507	316832	unknown	interacts with Yip1p; similar to NADH dehydrogenases
YOR001W	RRP6______	+1.18	488384	577206	rRNA processing, 5.8S	unknown
YOR377W	ATF1______	+1.12	218254	245122	acetate ester biosynthesis	alcohol acetyltransferase
YPR074C	TKL1______	+1.13	53742	60803	pentose phosphate cycle	transketolase
YBR052C	__________	+1.11	230019	255829	unknown	unknown; similar to Ycp4p, S. pombe obr1, and E. coli trp
YCLX02C	__________	+1.38	67262	92882
YDL169C	UGX2______	+1.56	64692	100757	unknown	unknown
YDR290W	__________	-1.22	50842	41652	unknown	unknown
YEL073C	__________	+2.07	79452	164665	unknown	unknown
YGR092W	DBF2______	+1.80	262808	474100	cell cycle	late mitosis; protein kinase
YHR106W	TRR2______	+1.59	717781	1143674	pyrimidine biosynthesis	thioredoxin reductase
YJR138W	IML1______	+1.03	62010	64104	plasmid maintenance (outative)	unknown
YLR286C	CTS1______	+1.52	1011216	1535857	cell wall biogenesis	endochitinase
YMR025W	__________	+1.07	105438	113312	unknown	unknown
YNL071W	LAT1______	+1.01	2631110	2667403	glycolysis	dihydrolipoamide S-acetyltransferase
YOR191W	RIS1______	+1.59	350498	557954	silencing	SNF2 family DNA-dependent ATPase
YPL169C	MEX67_____	+1.05	357195	373537	mRNA export	poly(A)+RNA binding protein
YAR030C	__________	-1.16	62162	53809	unknown	unknown
YBR252W	DUT1______	-1.82	485372	266041	pyrimidine metabolism	dUTP pyrophosphatase
YDR121W	DPB4______	-1.38	242973	175649	DNA replication	DNA polymerase epsilon subunit
YDR490C	PKH1______	+1.16	177677	205835	unknown	protein kinase (ser/thr)
YER176W	ECM32_____	+1.34	114553	153926	cell wall biogenesis	DNA helicase I
YGL183C	__________	+1.07	87932	94453	unknown	unknown
YGR290W	__________	-1.20	74501	61994	unknown	unknown
YIL082W	__________	+1.24	212217	262796	unknown	unknown
YJL184W	__________	+1.02	341152	348583	unknown	unknown
YKL180W	RPL17A____	-1.48	13509478	9116692	protein synthesis	ribosomal protein L17A
YLR114C	EFR4______	+1.06	467598	495813	unknown	unknown; similar to Drosophila bicaudal-D protein; null requires PHO85
YMR216C	SKY1______	+2.17	152473	330936	unknown	protein kinase
YNL275W	__________	+1.13	113526	127979	unknown	unknown; similar to human band 3 anion transport protein
YOR013W	__________	+1.15	123959	143111	unknown	unknown
YOR389W	__________	+2.23	262448	584860	unknown	unknown
YPR086W	SUA7______	+1.26	509041	638969	transcription	TFIIB subunit
YBR064W	__________	-1.04	61128	58630	unknown	unknown
YCR002C	CDC10_____	+1.05	578800	607777	cytokinesis	septin
YDL181W	INH1______	+1.30	472511	616197	ATP synthesis	mitochondrial ATPase inhibitor
YDR302W	GPI11_____	-1.38	170060	122982	protein processing	GPI-phosphoethanolamine transferase subunit
YGR104C	SRB5______	+1.30	141492	183841	transcription	RNA polymerase II mediator subunit
YHR118C	ORC6______	+1.15	579268	664124	DNA replication	origin recognition complex, 50 KD subunit
YJR150C	DAN1______	+1.16	92870	107705	unknown	unknown; induced during anaerobic growth
YLR297W	__________	-1.39	323060	232989	unknown	unknown
YMR036C	MIH1______	+1.41	108212	152217	cell cycle	M-phase phosphatase
YNL083W	__________	+1.28	68713	88053	unknown	unknown; mitochondrial carrier (MCF) family
YOR201C	PET56_____	-1.05	326946	311031	rRNA processing, mitochondrial	ribose methyltransferase
YPL181W	__________	+1.02	54218	55065	unknown	unknown
YBL003C	HTA2______	-1.48	3823299	2582816	chromatin structure	histone H2A
YBR264C	YPT10_____	-1.73	279777	162070	unknown	unknown; similar to rab proteins and other small GTP-binding
YDL003W	MCD1______	-1.10	398640	362583	mitosis, sister chromatid cohesion	unknown
YDR133C	__________	-1.29	11962845	9243243	unknown	unknown
YDR502C	SAM2______	-1.00	1862775	1862552	methionine biosynthesis	regulator; S-adenosylmethionine synthetase
YFL001W	DEG1______	-1.61	147436	91631	tRNA processing	pseudouridine synthase
YGL195W	GCN1______	-1.62	75310	46624	protein synthesis	translation activator of GCN4
YHL002W	__________	+1.21	231306	280787	unknown	unknown
YIL094C	LYS12_____	-1.27	1570433	1237669	lysine biosynthesis	homo-isocitrate dehydrogenase
YJL196C	ELO1______	-1.61	546227	339334	fatty acid metabolism	fatty acid elongation protein
YKL192C	ACP1______	-1.11	687741	619602	fatty acid biosynthesis	mitochondrial acyl carrier protein
YLR126C	__________	-1.06	86598	81915	unknown	unknown; similar to Pseudomonas aeroginosa anthranilate
YML003W	__________	+1.43	50353	72020	unknown	unknown
YMR228W	MTF1______	-1.27	135423	106427	transcription	mitochondrial RNA polymerase specificity factor
YNL285W	__________	-1.18	86086	72739	unknown	unknown
YOR025W	HST3______	-1.22	243616	199327	silencing	unknown
YPL003W	ULA1______	+1.08	137570	149087	protein degradation, Rub1p-mediated	Rub1p activating protein
YPR098C	__________	+1.03	235751	242545	unknown	unknown
YBR076W	ECM8______	+1.06	101117	107104	cell wall biogenesis	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YCR014C	POL4______	-1.05	128818	122266	DNA repair	DNA polymerase IV
YDL193W	__________	-1.37	203577	148211	unknown	unknown
YDR314C	__________	-2.10	72477	34457	unknown	unknown
YER016W	BIM1______	-1.37	360776	263889	cytoskeleton	microtubule binding protein
YGL003C	CDH1______	-1.24	114464	92490	cell cycle	cyclin degradation
YGR114C	__________	+1.18	121195	143047	unknown	unknown
YHR130C	__________	-1.91	55552	29025	unknown	unknown
YJL003W	__________	+1.10	115013	126261	unknown	unknown
YKL003C	MRP17_____	-1.18	226716	192176	protein synthesis	ribosomal protein, mitochondrial small subunit
YLL003W	SFI1______	+1.15	137621	158771	unknown	unknown
YLR309C	IMH1______	+1.35	107003	144582	secretion (putative)	unknown; suppresses ypt6 ts mutation
YMR047C	NUP116____	+1.27	588761	746511	nuclear protein targeting	nuclear pore protein
YNL095C	__________	+1.40	103147	143962	unknown	unknown; similar to Ecm3p
YOL003C	__________	+1.02	184567	187497	unknown	unknown
YOR213C	SAS5______	+1.20	179788	216620	silencing	unknown
YPL192C	__________	-1.04	150670	144332	unknown	unknown
YAR053W	__________	+1.07	106400	114108	unknown	unknown
YBL013W	FMT1______	-2.10	77930	37067	tRNA processing	met-tRNA formyltransferase
YBR276C	PPS1______	-1.09	311912	286451	unknown	protein phosphatase
YDL015C	__________	-1.69	652137	385163	unknown	unknown; similar to rat synaptic glycoprotein SC2
YDR145W	TAF61_____	+1.17	1396137	1628701	transcription	TFIID 61 kDsubunit
YDR514C	__________	-1.11	419299	379023	unknown	unknown
YFL012W	__________	-1.60	77481	48429	unknown	unknown
YGL207W	SPT16_____	+1.46	298206	434565	chromatin structure	non-histone protein
YHL011C	PRS3______	-1.02	222746	218580	purine biosynthesis	ribose-phosphate pyrophosphokinase 3
YIL105C	__________	-1.13	4764553	4209682	unknown	unknown; similar to Ask10p and Ynl047p
YJL208C	NUC1______	-1.05	377092	359918	mitochondrial recombination	endonuclease
YKL204W	EAP1______	-1.91	70240	36736	translation	unknown; associates with translation initiation factor eIF4E
YLR138W	NHA1______	+1.80	191005	344537	transport (putative)	Na+/H+ antiporter
YML012W	ERV25_____	+1.04	307562	319786	secretion	vesicle coat component
YMR240C	CUS1______	+1.28	321961	412959	mRNA splicing	U2 snRNP protein
YNL297C	MON2______	-1.09	54059	49455	secretion (putative)	unknown; brefeldin A sensitive; monensin sensitive
YOR037W	CYC2______	+1.13	200009	226960	mitochondrial protein targeting	cytochrome c import factor
YPL015C	HST2______	+1.84	214028	394801	unknown	similar to Sir2p
YPR110C	RPC40_____	-1.23	1261851	1026379	transcription	RNA polymerase III 40 kD subunit
YBR087W	RFC5______	-1.46	328314	224480	DNA replication	DNA polymerase processivity factor
YCR024C	PMP1______	+1.16	522295	606778	H+ homeostasis	regulates plasma membrane H+-ATPase
YDL205C	HEM3______	-1.21	182805	151119	heme biosynthesis	phorphobilinogen deaminase (uroporphyrinogen synthase)
YDR324C	__________	-1.41	384455	273101	unknown	unknown; similar to G-protein beta subunits
YER027C	GAL83_____	-1.37	263601	192522	glucose repression	component of Snf1 complex
YGL015C	__________	-1.24	66594	53678	unknown	unknown
YGR126W	__________	+1.44	51634	74333	unknown	unknown
YHR140W	__________	-1.50	60846	40508	unknown	unknown
YJL015C	__________	+2.02	173528	350971	unknown	unknown
YKL014C	__________	-1.17	297448	254338	unknown	unknown
YLL015W	BPT1______	+1.52	206217	314329	transport	bile pigment transporter
YLR320W	__________	-1.41	43272	30646	unknown	unknown
YMR057C	__________	+1.23	49850	61125	unknown	unknown
YNL107W	YAF9______	-1.06	199952	188909	unknown	unknown; similar to human AF-9 protein
YOL015W	__________	+1.65	66517	110058	unknown	unknown
YOR225W	__________	-2.08	343357	165385	unknown	unknown
YPL204W	HRR25_____	+1.15	781208	895591	DNA repair	casein kinase I isoform
YBL025W	RRN10_____	-1.02	87496	86125	transcription	component of upstream activation factor complex (UAF)
YBR288C	APM3______	-1.08	167699	155138	vacuolar protein targeting	AP-3 complex subunit
YDL027C	__________	+1.52	157663	240433	unknown	unknown
YDR157W	__________	-1.54	240888	156668	unknown	unknown
YDR526C	__________	+1.01	167908	170340	unknown	unknown
YFL021W	GAT1______	-1.37	401568	294020	nitrogen catabolism	transcription factor
YGL219C	__________	+1.38	199193	274418	unknown	unknown; similar to Mycoplasma genitalium threoninyl-tRNA
YHL023C	__________	-1.20	146906	122681	unknown	unknown
YIL117C	__________	+3.72	441028	1640002	unknown	unknown
YJL220W	__________	-1.16	59139	50904	unknown	unknown; similar to alpha-D-glucosidase (maltase)
YKL216W	URA1______	+1.20	778483	937173	pyrimidine biosynthesis	dihydroorotate dehydrogenase
YLR150W	STM1______	-1.52	7044925	4632119	unknown	unknown; suppressor of tom1 and pop2 mutations
YMR252C	__________	+1.03	134933	139068	unknown	unknown
YNL309W	STB1______	+1.16	94837	110033	unknown	binds Sin3p
YOR049C	__________	+1.67	129633	216107	unknown	unknown
YPL027W	__________	+1.02	54214	55032	unknown	unknown
YPR122W	AXL1______	-1.23	44421	36206	bud site selection, axial	unknown; insulin-degrading enzyme homolog
YBR098W	MMS4______	-1.29	57685	44744	methylmethanesulfonate resistance	transcription activator (putative)
YCR035C	RRP43_____	-1.62	140235	86665	rRNA processing	exoribonuclease
YDL217C	TIM22_____	-1.06	232603	218971	mitochondrial protein targeting	inner membrane carrier protein
YDR336W	__________	-2.54	244809	96545	unknown	unknown
YGL027C	CWH41_____	+1.28	241991	309607	cell wall biogenesis	beta-1,6-glucan assembly protein
YGR138C	__________	+4.68	499578	2338718	unknown	major facilitator superfamily
YHR151C	__________	+1.24	137883	171377	unknown	unknown
YJL027C	__________	+1.02	36854	37512	unknown	unknown
YKL026C	GPX1______	-1.12	40979	36700	glutathione metabolism (putative)	glutathione peroxidase (putative)
YLL027W	ISA1______	+1.98	275637	546823	unknown	unknown; Iron Sulfur Assembly -- IscA/NifA homolog
YLR332W	MID2______	+2.62	275757	721634	mating (putative)	unknown; mutant is sensitive to matin pheromone
YMR069W	__________	+1.01	51508	52190	unknown	unknown
YNL119W	__________	-1.41	839551	596963	unknown	unknown
YOL027C	__________	+1.53	382430	584423	unknown	unknown
YOR237W	HES1______	+1.25	63953	79996	sterol metabolism	unknown
YPL216W	__________	+1.29	186984	240752	unknown	unknown
YER188W	__________	+1.10	99647	109674	unknown	unknown
YBL037W	APL3______	+1.05	62036	64853	secretion	clathrin associated
YBR300C	__________	-1.14	69912	61480	unknown	unknown
YDL039C	__________	-1.37	175787	128099	unknown	unknown
YDR169C	STB3______	+1.28	151884	194825	unknown	binds Sin3p
YDR538W	PAD1______	-1.29	155665	120679	phenylacrylic acid resistance	phenylacrylic acid decarboxylase
YFL032W	__________	+1.24	88091	108966	unknown	unknown
YGL230C	__________	+1.22	57335	69830	unknown	unknown
YHL034C	SBP1______	+1.01	2200562	2223811	RNA processing	single stranded nucleic acid binding protein
YIL129C	TAO3______	+1.55	366164	569136	transcription (putative)	unknown; transcripiotnal activator of OCH1
YJR008W	__________	+2.46	123420	303589	unknown	unknown
YKR003W	__________	+1.40	223740	313499	unknown	unknown; similar to human oxysterol-binding protein
YLR160C	ASP3-4____	+1.97	872126	1715277	asparagine utilization	L-asparaginase II
YML034W	SRC1______	+1.34	87568	117127	unknown	unknown; induced at G2/M
YMR264W	CUE1______	-1.08	460149	427039	protein degradation, ubiquitin-mediated	recruits enzyme Ubc7p to membrane

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YNL321W	__________	+1.28	87669	112569	unknown	unknown; calcium permease family
YOR061W	CKA2______	+1.27	64124	81432	cell cycle	casein kinase II
YPL039W	__________	+1.17	83109	96934	unknown	unknown
YPR134W	MSS18_____	+1.18	166709	196363	mRNA splicing, COX1 mRNA	unknown
YCR047C	__________	-1.53	587473	382783	unknown	unknown; similar to rat methylglycine transferase
YDL229W	SSB1______	-3.70	156141	42227	translation	cytosolic HSP70
YDR348C	__________	+1.19	201636	238982	unknown	unknown
YER048C	CAJ1______	+1.02	492208	501397	unknown	unknown; similar to E. coli DnaJ
YGL039W	__________	-1.20	317926	264696	unknown	unknown
YGR150C	__________	-1.08	211467	194912	unknown	unknown; similar to Yjl083p
YHR163W	SOL3______	-1.12	828880	741632	tRNA splicing, putative	unknown
YJL039C	NUP192____	+1.52	216949	329427	nuclear protein targeting	nuclear pore protein
YKL037W	__________	+1.02	64230	65583	unknown	unknown
YLL039C	UBI4______	-1.15	3776937	3294452	protein degradation, ubiquitin-mediated	ubiquitin
YLR344W	RPL26A____	-1.81	7988096	4416549	protein synthesis	ribosomal protein L26A
YMR080C	NAM7______	-1.24	468053	377566	mRNA decay	RNA helicase, putative
YNL131W	TOM22_____	-1.27	638174	501416	mitochondrial protein targeting	outer membrane translocase component
YOL039W	RPP2A_____	-1.13	15568463	13722249	protein synthesis	ribosomal protein P2A/L44, acidic
YOR249C	APC5______	-1.65	291244	176538	mitosis	anaphase-promoting complex subunit
YPL228W	CET1______	+1.09	283921	310240	mRNA capping	capping enzyme beta subunit, RNA 5'-triphosphatase
YHR219W	__________	+2.39	3379443	8065653	unknown	unknown; similar to other subtelomerically-encoded proteins
YBL049W	__________	+3.73	83201	310090	unknown	unknown
YDL051W	LHP1______	-1.23	688531	559299	tRNA processing	RNA binding protein
YDR179C	__________	-1.20	89973	74713	unknown	unknown
YFL042C	__________	+1.04	100267	104614	unknown	unknown; similar to Yhr080p
YGL242C	__________	+1.05	352755	370968	unknown	unknown; similar to ankyrin and coiled-coil proteins
YHL046C	__________	+2.04	259663	529711	unknown	unknown; similar to members of the Srp1p/Tip1p family
YIL141W	__________	+1.34	55324	73988	unknown	unknown
YJR019C	TES1______	+2.00	86367	172606	fatty acid metabolism	peroxisomal acyl-CoA thioesterase
YKR015C	__________	+1.29	89473	115420	unknown	unknown
YLR172C	DPH5______	+1.03	840132	866185	diphthamide biosynthesis	diphthamide methyltransferase
YMR276W	DSK2______	+1.40	899837	1263408	spindle pole body dupl	ubiquitin-like protein
YNL333W	SNZ2______	+2.06	262964	540490	unknown	unknown; induced in stationary phase
YOR073W	__________	-1.23	211940	172230	unknown	unknown
YPL051W	ARL3______	+1.07	208440	222557	unknown	unknown; Similar to ADP-ribosylation factor
YPR144C	__________	+1.00	373642	373758	unknown	unknown; similar to RNA polymerase beta subunit
YBR121C	GRS1______	-1.27	2446768	1926113	protein synthesis	tRNA synthase, glycyl
YCR059C	__________	+1.14	373021	423820	unknown	unknown
YDL241W	__________	-1.58	193369	122079	unknown	unknown
YDR360W	__________	-1.30	61146	47107	unknown	unknown
YER059W	PCL6______	-1.11	116728	105182	cell cycle	cyclin (Pho85p)
YGL051W	__________	+1.16	164410	190061	unknown	unknown
YHR175W	CTR2______	+1.18	297502	350195	transport	copper transporter
YJL052W	TDH1______	+1.02	15653070	15913261	glycolysis	glyceraldehyde-3-phosphate dehydrogenase 1
YKL049C	CSE4______	-3.12	901698	288766	chromatin structure, centromeric	histone-related
YLL051C	FRE6______	+2.22	329633	732458	unknown	unknown; similar to ferric reductase Fre2p
YLR356W	__________	+1.47	189091	277608	unknown	unknown; similar to Scm4p, possible Cdc4p-interacting
YMR091C	NPL6______	+1.02	499169	510519	nuclear protein targeting	unknown
YNL143C	__________	+1.11	201403	223626	unknown	unknown
YOL051W	GAL11_____	+2.75	629863	1732926	transcription	RNA polymerase II mediator subunit
YOR261C	RPN8______	+1.08	1076120	1157452	protein degradation	26S proteasome regulatory subunit
YPL240C	HSP82_____	+2.26	3779093	8539960	protein folding	HSP90 homolog
YJR162C	__________	+1.35	104518	141197	unknown	unknown; similar to subtelomerically-encoded proteins
YBL061C	SKT5______	+1.60	128547	206000	cell wall biogenesis	chitin synthase regulator
YDL063C	__________	-1.16	358150	310053	unknown	unknown
YDR190C	RVB1______	-1.18	883336	751630	unknown	unknown; similar to RUVB
YFL054C	__________	+1.38	71953	99298	unknown	unknown; similar to Fps1p and Ypr192p transmembrane channels
YGL254W	FZF1______	+1.37	119588	163764	sulfite metabolism	(putative) transcription factor
YIL153W	RRD1______	+1.57	321083	503853	drug resistance	unknown
YJR030C	__________	-1.63	369017	226374	unknown	unknown
YKR027W	__________	+1.37	150322	206148	unknown	unknown
YLR184W	__________	-1.03	42567	41417	unknown	unknown
YML055W	SPC2______	-1.17	292826	249451	secretion	signal peptidase subunit
YMR288W	__________	+1.09	47954	52101	unknown	unknown
YNR006W	VPS27_____	+1.99	175178	349062	vacuolar protein targeting	component of class E protein complex
YOR085W	OST3______	-1.02	241671	236485	protein glycosylation	oligosaccharyltransferase complex subunit
YPL061W	ALD6______	+1.09	2067907	2247692	ethanol utilization	acetaldehyde dehydrogenase
YPR156C	__________	+3.42	442922	1512843	unknown	major facilitator superfamily
YBR133C	HSL7______	+1.37	157970	216370	cell cycle	Swe1p (kinase) regulator
YCR070W	__________	+1.22	299999	365863
YDR005C	MAF1______	+1.02	221571	225188	protein targeting (putative)	unknown
YDR370C	__________	-1.27	206617	162586	unknown	unknown
YER068W	MOT2______	+1.18	155691	183786	mating	transcriptional regulator
YGL063W	PUS2______	+1.39	69782	97332	tRNA processing	pseudouridine synthase
YGR170W	PSD2______	+1.57	125800	198119	phospholipid metabolism	phosphatidylserine decarboxylase 2
YHR187W	IKI1______	-1.02	238613	233556	killer toxin sensitivity	unknown
YJL064W	__________	+1.17	197638	231065	unknown	unknown
YKL061W	__________	+1.35	162839	219369	unknown	unknown
YLL063C	AYT1______	+1.61	114926	185213	unknown	transacetylase (putative)
YLR368W	__________	+1.24	144231	179433	unknown	unknown
YMR103C	__________	+1.04	47841	49715	unknown	unknown
YNL155W	__________	+1.44	375888	541443	unknown	unknown
YOL061W	PRS5______	+1.16	774057	895298	purine, pyrimidine, tryptophan and histidine biosynthesis	phosphoribosylpyrophosphate synthetase
YOR273C	__________	+3.10	104330	322950	unknown	unknown; similar to members of major facilitator superfamily
YPL251W	__________	-1.17	358835	307649	unknown	unknown
YMR318C	__________	+1.31	2476279	3246065	unknown	unknown; similar to alcohol-dehydrogenases
YBL073W	__________	+1.11	57936	64565	unknown	unknown
YDL075W	RPL31A____	-1.72	9712463	5657158	protein synthesis	ribosomal protein L31A
YDR202C	RAV2______	-2.06	425026	206774	vacuolar acidification (putative)	unknown; regulates V-ATPase
YFL066C	__________	+3.46	334337	1155375	unknown	unknown; similar to other subtelomerically-encoded proteins
YGR003W	__________	+1.26	84065	106234	unknown	unknown
YHR017W	YSC83_____	-1.15	211890	184277	unknown	unknown; similar to S.douglasii YSD83
YIL164C	NIT1______	+1.20	177136	211863	unknown	nitrilase
YJR042W	NUP85_____	-1.06	65733	62233	nuclear protein targeting	nuclear pore protein
YKR039W	GAP1______	-1.93	1006716	522592	transport	general amino acid permease
YLR196W	PWP1______	-1.07	760832	714271	unknown	unknown; similar to beta-transducin superfamily
YML066C	__________	+1.39	112309	156168	unknown	unknown
YMR298W	__________	-1.20	418110	347208	unknown	unknown
YNR018W	__________	+1.49	959091	1430226	unknown	unknown
YOR097C	__________	+1.27	189701	241315	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YPL073C	__________	+1.05	62635	65565	unknown	unknown
YPR164W	KIM3______	-1.14	57415	50405	diepoxybutane and mitomycin C resistance	unknown
YBR145W	ADH5______	+1.13	949861	1070704	glycolysis	alcohol dehydrogenase V
YCR083W	TRX3______	-1.42	146618	102957	oxidative stress response	thioredoxin, mitochondrial
YDR017C	KCS1______	+1.57	457435	716048	cell wall organization	(putative) transcription factor
YDR382W	RPP2B_____	-1.65	13907631	8436594	protein synthesis	ribosomal protein L45, acidic
YER079W	__________	-1.86	241450	129702	unknown	unknown
YGL075C	MPS2______	-1.16	89972	77507	cytoskeleton	spindle pole body duplication; nuclear envelope/ER protein
YGR182C	__________	+1.12	811995	910666	unknown	unknown
YHR199C	__________	+1.24	511152	635746	unknown	unknown; similar to Yhr198p
YJL076W	NET1______	+1.62	108704	176368	silencing	unknown
YKL073W	LHS1______	+1.56	283737	442662	secretion	chaperone; ER protein translocation
YLR008C	__________	+1.53	56569	86667	unknown	unknown
YLR380W	CSR1______	-1.17	421862	359269	unknown	unknown; multicopy suppressor of chs5 spa2 double mutant
YMR115W	__________	+1.12	270884	303330	unknown	unknown
YNL167C	SKO1______	+1.43	147428	210616	transcription	CREB-like transcriptional repressor
YOL073C	__________	+1.15	183998	210769	unknown	unknown
YOR285W	__________	+1.45	852443	1234687	unknown	unknown; similar to Drosophila melanogaster heat shock
YPL261C	__________	+1.12	63846	71499	unknown	unknown
YBL085W	BOI1______	-1.31	45013	34373	bud growth	binds Bem1p
YDL087C	LUC7______	+1.04	70910	73585	mRNA processing (putative)	unknown; synthetic lethal with cap-binding complex
YFR010W	UBP6______	+1.42	388414	552073	protein degradation, ubiquitin-mediated	deubiquitinating enzyme (putative)
YGR015C	__________	+1.22	94938	116251	unknown	unknown
YHR028C	DAP2______	+1.25	469890	585089	protein degradation	dipeptidyl aminopeptidase B
YIL175W	__________	+2.76	109127	300853	unknown	unknown
YJR054W	__________	+1.65	263928	434416	unknown	unknown
YKR051W	__________	+1.16	169509	197168	unknown	unknown
YLR208W	SEC13_____	-1.01	977358	971986	secretion	vesicle coat component
YML078W	CPR3______	+1.01	1081635	1091856	protein folding	peptidyl-prolyl cis-trans isomerase
YMR308C	PSE1______	+1.42	452834	641570	nuclear protein targeting	beta-karyopherin
YNR030W	ECM39_____	-1.02	278384	273079	cell wall biogenesis	unknown
YOR109W	INP53_____	+1.80	394784	709480	vesicle trafficking; phosphatidylinositol metabolism	inositol polyphosphate 5-phosphatase
YPL085W	SEC16_____	-1.26	78710	62676	secretion	vesicle coat component
YPR176C	BET2______	+1.24	356478	443203	protein processing	geranylgeranyltransferase type II beta subunit
YBR157C	ICS2______	-1.31	108360	82648	Cu2+ ion homeostasis (putative)	unknown
YCR094W	CDC50_____	+1.19	152770	181419	cell cycle	unknown
YDR029W	__________	-1.12	68685	61377	unknown	unknown
YDR394W	RPT3______	+1.32	632963	835292	protein degradation	26S proteasome subunit
YER090W	TRP2______	+1.21	856834	1039068	tryptophan biosynthesis	anthranilate synthase component I
YGL087C	MMS2______	-1.07	345555	323842	DNA repair, postreplication	unknown
YGR194C	XKS1______	+1.54	126437	195101	xylulose utilization	xylulokinase
YHR211W	FLO5______	+2.14	239866	514070	flocculation	flocculin, similar to Flo1p
YJL088W	ARG3______	-1.10	357635	323966	arginine biosynthesis	ornithine carbamoyltransferase
YKL085W	MDH1______	+2.06	506511	1042928	TCA cycle	malate dehydrogenase
YLR020C	__________	+1.29	67070	86617	unknown	unknown; similar to triacylglycerol lipase
YLR392C	__________	+1.50	96519	144803	unknown	unknown
YMR126C	__________	-1.35	155546	115178	unknown	unknown
YNL179C	__________	+1.00	140956	140981	unknown	unknown
YOL085C	__________	+1.06	62523	66336	unknown	unknown
YOR297C	TIM18_____	+1.04	315647	328343	mitochondrial protein targeting	inner membrane translocase component
YPL273W	SAM4______	-1.51	1965345	1304310	sulfur amino acid metabolism	S-adenosylmethionine:homocysteine S-methyltransferase
YAL004W	__________	-1.41	90613	64132	unknown	unknown
YBR169C	SSE2______	+1.95	180882	352720	heat shock response	HSP70 family
YCR106W	__________	+1.04	160376	166610	unknown	unknown; similar to transcription factors
YDR040C	ENA1______	+1.84	314014	576460	transport	plasma membrane ATPase
YDR407C	TRS120____	-1.11	360290	323141	secretion (putative)	transport protein particle (TRAPP) subunit, 120 kD
YER102W	RPS8B_____	-1.36	14637626	10746899	protein synthesis	ribosomal protein S8B
YGL100W	SEH1______	-1.97	868053	439914	nuclear protein targeting	nuclear pore protein
YGR207C	__________	-1.24	521021	419622	unknown	electron-transferring flavoprotein, beta chain (putative)
YIL004C	BET1______	-1.07	206438	192720	secretion	vesicle recycling; SNARE
YJL101C	GSH1______	+1.47	621554	915709	glutathione biosynthesis	gamma-glutamylcysteine synthetase
YKL096W	CWP2______	+1.04	15307596	15927705	unknown	cell wall protein
YLR033W	__________	-1.30	149286	114745	unknown	involved in temperature-sensitive growth and in pheromone response pathway
YLR405W	__________	-1.23	265035	215208	unknown	unknown
YMR138W	CIN4______	-1.16	137642	118284	mitosis, chromosome segregation	GTP-binding protein
YNL192W	CHS1______	+1.02	46294	47435	cytokinesis	chitin synthase
YOL098C	__________	+1.04	737155	769225	unknown	unknown
YOR308C	SNU66_____	+1.39	119746	165964	mRNA splicing (putative)	U4/U6.U5 snRNP protein
YPR003C	__________	+1.07	78478	83945	unknown	unknown; similar to Sul1p and sulfate transporters from
YBL098W	__________	+2.31	149850	346865	unknown	unknown; similar to bacterial NADP/NAD-dependent
YCL003W	__________	-1.16	81497	70465
YDL100C	__________	-1.27	321434	253033	unknown	unknown; similar to E. coli arsenical pump-driving ATPase
YDR223W	__________	+1.09	104690	114045	unknown	unknown
YEL004W	YEA4______	-1.01	104395	103557	unknown	unknown; similar to GOG5, a gene involved in vanadate
YFR023W	PES4______	-1.08	74584	68861	DNA replication	unknown; suppresses DNA polymerase epsilon mutation
YHR040W	__________	-1.14	204902	179398	unknown	unknown; similar to Hit1p, expressed under
YIR011C	STS1______	+1.00	417700	418561	nuclear protein targeting	Rna15 transport factor
YJR067C	YAE1______	-1.20	168015	139679	unknown	unknown
YKR064W	__________	-1.24	52341	42155	unknown	unknown; similar to transcription factors, has Zn[2]-Cys[6]
YLR221C	__________	-1.55	504196	324245	unknown	unknown
YML091C	RPM2______	+1.81	403277	731830	tRNA processing, mitochondrial	RNase P subunit
YNL004W	HRB1______	+1.06	456303	485931	unknown	RNA binding protein (putative)
YNR043W	MVD1______	-1.18	1443351	1222690	sterol metabolism	mevalonate pyrophosphate decarboxylase
YOR122C	PFY1______	-1.04	1903522	1827581	cytoskeleton	profilin
YPL098C	__________	-1.04	368149	353786	unknown	unknown
YPR189W	SKI3______	-1.23	61253	49912	mRNA decay and virus resistance	unknown
YAL017W	FUN31_____	+1.43	236417	339168	unknown	putative protein kinase
YBR181C	RPS6B_____	-2.04	14290138	6991340	protein synthesis	ribosomal protein S6B
YCRX11W	__________	-6.07	446327	73499
YDR052C	DBF4______	-1.38	120598	87288	cell cycle	Cdc7p (kinase) regulator
YDR419W	RAD30_____	-1.56	77674	49940	DNA repair	unknown
YER114C	BOI2______	-1.53	118208	77202	bud emergence	binds Bem1p
YGL112C	TAF60_____	+1.90	104821	199607	transcription	TFIID 60 kD subunit
YGR219W	__________	-1.09	152837	139754	unknown	unknown
YIL015W	BAR1______	+1.20	63403	76281	mating	alpha-factor degradation
YJL113W	__________	-1.42	43369	30524	unknown	unknown
YKL109W	HAP4______	+1.71	198290	339594	transcription	component of heterotrimeric CCAAT-binding factor
YLR043C	TRX1______	-1.10	797618	722430	DNA replication	thioredoxin I
YLR415C	__________	+1.23	51129	63090	unknown	unknown
YMR150C	IMP1______	-1.06	250676	237262	protein processing	mitochondrial inner membrane protease

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YNL204C	SPS18_____	+1.19	56037	66567	sporulation	unknown
YOL108C	INO4______	+1.34	162926	218143	phospholipid biosynthesis	transcription factor
YOR320C	__________	-1.08	437773	403607	unknown	unknown
YPR015C	__________	+1.45	88072	127575	unknown	unknown; similar to human GT box-binding protein
YBL108W	__________	-1.00	71834	71482	unknown	unknown
YCL016C	__________	-1.21	101509	83928	unknown	unknown
YDL112W	TRM3______	-1.71	65879	38417	tRNA processing	tRNA robose methylase
YEL016C	__________	+1.03	81064	83739	unknown	unknown; similar to Ycr026p
YFR033C	QCR6______	+1.13	1357391	1538936	oxidative phosphorylation	ubiquinol cytochrome-c reductase subunit
YGR038W	ORM1______	-1.60	284908	178614	unknown	unknown
YHR051W	COX6______	+1.18	893477	1052922	oxidative phosphorylation	cytochrome-c oxidase subunit VI
YIR021W	MRS1______	-1.07	90915	85350	mRNA splicing, COB mRNA	unknown
YJR079W	__________	-1.46	46112	31521	unknown	unknown
YKR076W	ECM4______	+1.79	178194	319172	cell wall biogenesis	unknown
YLR231C	__________	+1.44	123230	177129	unknown	unknown; similar to rat kynureninase (PIR:PS0370)
YML101C	__________	+1.24	146268	182065	unknown	unknown
YNL016W	PUB1______	+1.10	1722049	1895174	mRNA processing	poly(A)+ RNA-binding protein
YNR055C	HOL1______	+1.78	479342	853251	transport	(putative) multidrug resistance permease
YOR134W	BAG7______	+1.64	79451	130617	signaling	GTPase activating protein
YPL110C	__________	-1.07	52211	48849	unknown	unknown; similar to Pho81p
YPR201W	ARR3______	+1.45	99309	143852	arsenic resistance	arsenite transporter
YAL028W	__________	+1.12	89004	99766	unknown	unknown
YBR193C	MED8______	-1.07	86279	80291	transcription	RNA polymerase II mediator subunit
YDR064W	RPS13_____	-1.43	3183551	2233547	protein synthesis	ribosomal protein S13
YDR431W	__________	-2.45	118430	48340	unknown	unknown
YER125W	RSP5______	+1.50	231095	346785	protein degradation, ubiquitin-mediated	ubiquitin-protein ligase (E3 enzyme)
YGL124C	MON1______	+1.92	100377	193023	secretion (putative)	unknown; brefeldin A sensitive; monensin sensitive
YGR231C	PHB2______	-1.17	757738	649711	aging	prohibitin homolog
YIL027C	__________	-1.44	137104	95068	unknown	unknown
YJL125C	GCD14_____	+1.04	391640	407283	protein synthesis	translation repressor of GCN4
YKL121W	__________	+1.67	55858	93398	unknown	unknown
YLR055C	SPT8______	-1.21	185410	153826	chromatin structure	histone acetyltransferase complex subunit
YLR425W	TUS1______	-1.03	95158	92496	unknown	unknown; interacts with Sec1p
YMR160W	__________	+1.14	49957	57074	unknown	unknown
YNL216W	RAP1______	+1.18	93685	110109	transcription	transcriptional repressor and activator
YOL120C	RPL18A____	-1.62	9672808	5971706	protein synthesis	ribosomal protein L18A
YOR332W	VMA4______	-1.51	3019957	1997138	vacuolar acidification	vacuolar H+-ATPase V1 domain 27 KD subunit
YPR027C	__________	-1.21	141922	117185	unknown	unknown; similar to Ynl019p and Ynl033p
YBR007C	__________	+1.60	155196	248099	unknown	unknown
YCL028W	RNQ1______	-1.11	494323	447102	unknown	unknown; "transferable epigenetic modifier"
YDL124W	__________	+1.78	1077661	1916002	unknown	unknown
YEL027W	CUP5______	-2.06	2723623	1320541	ATP synthesis	vacuolar ATP synthase subunit
YFR044C	__________	-1.46	1101715	752294	unknown	unknown; similar to Ybr281p
YGR045C	__________	-1.51	66301	43844	unknown	unknown
YHR062C	RPP1______	+1.16	346761	402062	rRNA and tRNA processing	RNase P and RNase MRP subunit
YIR032C	DAL3______	-1.18	69734	58908	purine metabolism	ureidoglycolate hydrolase
YJR092W	BUD4______	-1.03	61536	59744	bud site selection, axial	unknown
YKR088C	__________	+1.40	299627	419849	unknown	unknown
YLR243W	__________	+1.05	443480	463844	unknown	unknown
YML112W	CTK3______	+1.14	264151	301201	cell cycle (putative)	protein kinase subunit
YNL028W	__________	+1.01	57495	58119	unknown	unknown
YNR067C	__________	+1.45	366570	531296	unknown	unknown
YOR144C	EFD1______	+1.08	88614	95345	recombination (putative)	unknown
YPL122C	TFB2______	-1.07	231627	217326	transcription	TFIIH 55 kD subunit
YAL038W	CDC19_____	+1.04	12598716	13054467	glycolysis	pyruvate kinase
YBR205W	KTR3______	-1.13	533263	473674	protein glycosylation	putative alpha-1,2-mannosyltransferase
YDR076W	RAD55_____	-1.11	130479	117516	DNA repair and recombination	RecA homolog
YDR443C	SSN2______	+2.15	677195	1457468	transcription	RNA polymerase II mediator subunit
YER137C	__________	-1.34	87135	65247	unknown	unknown
YGL136C	__________	+1.26	169918	213532	unknown	unknown; similar to E. coli ftsJ protein
YGR243W	__________	+1.75	68658	120490	unknown	unknown
YIL039W	__________	+1.14	483660	551130	unknown	unknown
YJL137C	GLG2______	+1.52	94873	144146	glycogen metabolism	glycogen synthesis initiator
YKL133C	__________	+1.58	76734	121149	unknown	unknown
YLR067C	PET309____	-1.03	44143	42859	RNA processing	COX1 mRNA stability
YLR437C	__________	+1.29	433119	560677	unknown	unknown
YMR172W	HOT1______	+1.33	109043	144773	osmotic stress response (putative)	unknown; nuclear protein; similar to Msn1p
YNL228W	__________	+1.00	268713	269094	unknown	unknown
YOL132W	__________	+1.18	57432	68047	unknown	unknown; similar to glycophospholipid-anchored surface glycoprotein GAS1
YPR039W	__________	+1.49	84890	126241	unknown	unknown
YBR017C	KAP104____	+1.09	199137	218009	nuclear protein targeting	beta-karyopherin
YCL040W	GLK1______	+2.85	229995	655441	glycolysis	glucokinase
YDL134C	PPH21_____	+1.15	732432	845002	cell cycle	protein phosphatase 2A
YDR259C	YAP6______	-1.19	136357	114618	salt tolerance	basic leu zipper transcription factor
YEL039C	CYC7______	+1.35	194256	262410	respiration	cytochrome c (isoform 2)
YFR056C	__________	+1.88	120358	226160	unknown	unknown
YGR057C	LST7______	+1.34	62906	83986	secretion	unknown; post-Golgi
YHR072W	ERG7______	+1.22	284767	346294	sterol metabolism	lanosterol synthase
YIR044C	__________	+3.66	139922	511778	unknown	unknown
YJR103W	URA8______	+2.77	236850	656540	pyrimidine biosynthesis	CTP synthase
YKR100C	__________	+1.85	286375	530536	unknown	unknown
YLR255C	__________	+1.31	45861	60043	unknown	unknown
YML123C	PHO84_____	-5.26	6590463	1251999	transport	inorganic phosphate permease
YNL038W	__________	-1.48	252596	171045	unknown	unknown
YOR156C	NFI1______	+1.23	199631	245044	unknown	interacts with Cdc12p in 2-hybrid assay
YPL134C	ODC1______	+1.49	126997	189498	unknown	unknown; similar to mitochondrial ADP/ATP carrier proteins
YAL049C	__________	+1.30	295281	382847	unknown	unknown
YBR217W	APG12_____	-1.27	112125	88345	autophagy	unknown
YDR088C	SLU7______	+1.01	170677	172382	mRNA splicing	3' splice site selection
YDR455C	__________	+1.17	73772	86395	unknown	unknown
YER146W	LSM5______	-1.47	313845	214168	mRNA splicing (putative)	unknown; similar to snRNA-associated protein
YGL148W	ARO2______	-1.59	1656630	1042623	aromatic amino acid biosynthesis	chorismate synthase
YGR255C	COQ6______	+1.20	276989	333689	ubiquinone biosynthesis	monooxygenase
YIL051C	MMD1______	-1.43	1186599	829035	maintenance of mitochondrial DNA	unknown
YJL149W	__________	+1.73	149270	258032	unknown	unknown
YKL145W	RPT1______	-1.15	666242	577103	protein degradation, ubiquitin-mediated	26S proteasome subunit
YLR079W	SIC1______	+1.21	308681	373073	cell cycle	Cdc28p-Clb5 protein kinase inhibitor
YLR449W	FPR4______	-1.01	1493253	1483013	protein folding (putative)	similar to peptidyl-prolyl cis-trans isomerase
YMR182C	RGM1______	+1.55	178609	276484	transcription	putative repressor
YNL240C	NAR1______	+1.38	229693	317751	nuclear organization and biogenesis (putative)	unknown; similar to human Narf

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YOL144W	NOP8______	+1.08	372525	403210	ribosome biogenesis (putative)	unknown; nucleolar protein
YOR354C	__________	+1.18	308216	363623	unknown	unknown
YPR051W	MAK3______	-1.01	279061	275086	viral propagation	L-A virus GAG protein N-acetyltransferase
YBR029C	CDS1______	-1.26	86192	68558	lipid metabolism	CDP-diacylglycerol synthase
YCL052C	PBN1______	+1.14	308608	352258	protein degradation	protease B
YDL146W	__________	-1.03	79781	77488	unknown	unknown
YDR267C	__________	-1.26	285657	226476	unknown	unknown; similar to Sec13p and other proteins with WD
YEL051W	VMA8______	-1.44	1215408	843777	vacuolar acidification	vacuolar H+-ATPase V1 domain D subunit
YGR069W	__________	-1.15	186760	162256	unknown	unknown
YHR083W	__________	-1.11	334519	301074	unknown	unknown
YJR115W	__________	+1.12	254712	286055	unknown	unknown
YLR263W	RED1______	+1.19	60858	72375	meiosis, synapsis	synaptonemal complex component (putative)
YMR002W	__________	+2.11	935526	1971209	unknown	unknown
YNL050C	__________	-1.18	372765	317093	unknown	unknown
YOR168W	GLN4______	-1.17	433791	369605	protein synthesis	tRNA synthetase, glutaminyl
YPL146C	__________	-1.40	879984	628678	unknown	unknown
YAL063C	FLO9______	+2.02	247567	500425	flocculation	cell wall protein
YBR229C	ROT2______	-1.01	150581	149756	cytoskeleton	glucosidase II
YDR467C	__________	-1.06	138673	131082	unknown	unknown
YER157W	SEC34_____	+1.02	180975	184892	secretion	Golgi protein retention
YGL160W	__________	+1.33	90657	120525	unknown	unknown
YGR267C	FOL2______	+1.45	561747	816899	folate biosynthesis	GTP cyclohydrolase I
YIL063C	YRB2______	+1.57	429468	674952	nuclear export	Ran-GTPase-binding protein
YJL161W	__________	+2.79	98164	273571	unknown	unknown
YKL157W	APE2______	+2.02	381975	770733	protein degradation	aminopeptidase yscII
YLR091W	__________	+1.32	58843	77492	unknown	unknown
YLR461W	PAU4______	+2.35	233521	549227	unknown	unknown; seripauperin family
YNL252C	MRPL17____	-1.10	294664	267017	protein synthesis	ribosomal protein, mitochondrial L17
YOL156W	HXT11_____	+2.42	114480	277433	transport	hexose permease
YOR366W	__________	+1.03	76743	79026	unknown	unknown
YPR063C	__________	-1.09	376034	344617	unknown	unknown
YBR041W	FAT1______	-1.18	37583	31807	transport	long-chain fatty acid transporter
YCL064C	CHA1______	+2.00	130045	259835	hydroxy amino acid metabolism	L-serine/L-threonine deaminase
YDL158C	__________	-1.28	47506	37060	unknown	unknown
YDR279W	__________	+1.02	131419	134547	unknown	unknown
YEL062W	NPR2______	+1.21	70121	84994	nitrogen transport	transcription factor
YGR081C	__________	-1.27	454056	357043	unknown	unknown; similar to chicken myosin heavy chain PIR:A29320
YHR095W	__________	+1.06	104678	111091	unknown	unknown
YJR127C	ZMS1______	+1.62	242719	393117	unknown	unknown; similar to Adr1p and Yml081p
YLR275W	SMD2______	-1.06	163148	154458	mRNA splicing	U1 snRNP protein
YMR014W	__________	-1.10	641122	581271	unknown	unknown
YNL060C	__________	-1.33	906973	682787
YOR180C	DCI1______	+1.31	75763	99194	fatty acid metabolism	delta(3,5)-delta(2,4)-dienoyl-CoA isomerase
YPL158C	__________	-1.09	224204	205677	unknown	unknown
YAR009C	__________	-1.35	45309	33478	unknown	unknown
YBR241C	__________	+1.66	76526	126963	unknown	unknown; similar to sugar permeases
YDR110W	FOB1______	+1.03	135147	138965	DNA replication(putative)	fork blocking protein
YDR479C	__________	+1.29	153012	196777	unknown	unknown
YER166W	__________	-1.34	49135	36714	unknown	unknown; similar to members of the Drs2p family of P-type
YGL172W	NUP49_____	-1.03	144068	139484	nuclear protein targeting	nuclear pore protein
YGR279C	SCW4______	-1.27	4266760	3349042	cell wall biogenesis	glucanase (putative)
YIL072W	HOP1______	+1.64	80856	132461	meiosis, synapsis	DNA binding protein
YJL173C	RFA3______	+1.08	373120	404425	DNA replication	replication factor A, 13 kD subunit
YKL169C	__________	-1.34	208339	155952	unknown	unknown
YLR103C	CDC45_____	-1.03	125248	121475	DNA replication	pre-replicative complex subunit (putative)
YMR205C	PFK2______	+1.38	1421813	1955437	glycolysis	phosphofructokinase
YNL264C	PDR17_____	-1.05	249896	238857	drug resistance	unknown
YOR002W	ALG6______	+1.32	486802	643036	protein glycosylation	glucosyltransferase
YOR378W	__________	+1.47	78148	114920	unknown	unknown; similar to members of major facilitator superfamily
YPR075C	OPY2______	+2.53	254633	644941	signaling (putative)	pheromone pathway
YBR053C	__________	+1.80	124720	224168	unknown	unknown; similar to rat calcium-binding protein regucalcin
YCLX03C	__________	-1.15	48964	42712
YDL170W	UGA3______	+1.35	172613	233530	transcription	activator of GABA catabolic genes
YDR291W	__________	-1.18	92613	78761	unknown	unknown; similar to Sgs1p and other DNA helicases
YEL074W	__________	+1.15	135241	155049	unknown	unknown
YGR093W	__________	-1.05	347336	329435	unknown	unknown
YHR107C	CDC12_____	-1.06	939680	888197	cytokinesis	septin
YJR139C	HOM6______	+1.12	1810814	2028424	methionine and threonine biosynthesis	homoserine dehydrogenase
YLR287C	__________	-1.54	340130	220330	unknown	unknown
YMR026C	PEX12_____	+1.03	247177	255374	peroxisome biogenesis	integral membrane protein
YNL072W	RNH35_____	-1.17	201699	172300	DNA replication (putative)	ribonuclease H
YOR192C	__________	+1.56	221868	346858	unknown	putative thiamine transporter
YPL170W	__________	+1.09	64620	70659	unknown	unknown
YAR031W	__________	+1.37	120957	165762	unknown	unknown; similar to subtelomerically-encoded proteins
YBR253W	SRB6______	+1.06	205067	218330	transcription	RNA polymerase mediator subunit
YDR122W	KIN1______	+1.48	122787	181997	unknown	protein kinase
YDR491C	__________	-1.18	120727	102670	unknown	unknown; similar to Hrd312p
YER177W	BMH1______	+1.13	4513682	5105885	unknown	unknown; similar to mammalian 14-3-3 proteins
YGL184C	STR3______	-2.74	359855	131572	methionine biosynthesis	cystathionine beta-lyase
YGR291C	__________	-1.14	66319	58164	unknown	unknown
YIL083C	__________	+1.02	312217	319684	unknown	unknown
YJL185C	__________	+1.21	161120	195174	unknown	unknown
YKL181W	PRS1______	-1.02	2073023	2041120	purine, pyrimidine, tryptophan and histidine biosynthesis	phosphoribosylpyrophosphate synthetase
YLR115W	CFT2______	-1.03	155583	151531	mRNA 3'-end processing	cleavage/polyadenylation factor CF II component
YMR217W	GUA1______	-1.35	3710254	2744443	purine metabolism	GMP synthase
YNL276C	__________	+1.01	171894	173558	unknown	unknown
YOR014W	RTS1______	+2.11	320694	676322	stress response	protein phosphatase 2A B-type regulatory subunit
YOR390W	__________	-1.14	280565	246164	unknown	unknown
YPR087W	__________	-1.22	918234	753853	unknown	unknown
YBR065C	ECM2______	+1.25	82364	103339	cell wall biogenesis and mRNA splicing (putative)	unknown
YCR003W	MRPL32____	-1.37	93798	68429	protein synthesis	ribosomal protein, mitochondrial L32
YDL182W	LYS20_____	-1.59	2761472	1734788	lysine biosynthesis	homocitrate synthase
YDR303C	__________	-3.51	529201	150670	unknown	unknown; similar to transcription factors
YER007W	PAC2______	+1.03	97247	99703	mitosis	unknown; microtubule stability
YGR105W	VMA21_____	-1.97	263279	133745	vacuolar acidification	vacuolar H+-ATPase assembly protein
YHR119W	SET1______	+1.10	775666	853620	transcription	trithorax protein family
YJR151C	__________	+1.54	125642	193343	unknown	unknown
YLR298C	YHC1______	+1.14	174443	198851	mRNA splicing	U1 snRNP protein
YMR037C	MSN2______	+1.37	123210	169240	stress response	transcriptional activator
YNL084C	END3______	+1.26	256566	324288	endocytosis	actin cytoskeleton regulatory complex component

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YOR202W	HIS3______	-1.31	328422	251365	histidine biosynthesis	imidazoleglycerol-phosphate dehydratase
YPL182C	__________	+1.79	112416	201645	unknown	unknown
YBL004W	__________	-1.19	109031	91981	unknown	unknown; major facilitator superfamily
YBR265W	TSC10_____	-1.04	250332	240153	sphingolipid biosynthesis	3-ketosphinganine reductase
YDL004W	ATP16_____	+1.05	687256	721736	ATP synthesis	F1F0-ATPase subunit
YDR134C	__________	+1.19	13477380	16040997	unknown	unknown
YDR503C	LPP1______	-1.35	312909	232198	phospholipid metabolism	lipid phosphate phosphatase
YFL002C	SPB4______	+1.01	362437	366841	rRNA processing, 25S	RNA helicase
YGL196W	__________	+1.00	229329	230456	unknown	unknown
YHL003C	LAG1______	-1.74	291923	167505	aging	unknown
YIL095W	PRK1______	+1.04	258068	269184	unknown	protein kinase
YJL197W	UBP12_____	-1.11	95398	85772	protein degradation, ubiquitin-mediated	ubiquitin-specific protease
YKL193C	SDS22_____	+1.49	169358	251735	glucose repression	Glc7p regulatory subunit
YLR127C	APC2______	-1.07	67045	62694	mitosis	anaphase promoting complex subunit
YML004C	GLO1______	+1.40	609726	851277	amino acid metabolism	glyoxalase I
YMR229C	RRP5______	-1.09	2348923	2162587	rRNA processing	unknown; required for pre-rRNA cleavage
YNL286W	CUS2______	-1.32	258682	195605	mRNA splicing, putative	unknown
YOR026W	BUB3______	+1.04	253396	262859	cell cycle, checkpoint	unknown
YPL004C	__________	+1.01	606553	610215	unknown	unknown; similar to tropomyosin
YPR099C	__________	-1.35	510382	379343	unknown	unknown
YBR077C	__________	-1.04	177166	171168	unknown	unknown
YCR015C	__________	-1.27	100354	78748	unknown	unknown
YDL194W	SNF3______	-1.69	81555	48227	transport	glucose permease
YDR315C	IPK1______	-1.48	134216	90694	signaling (putative)	inositol(1,4,5)P3 6-kinase
YER017C	AFG3______	+1.45	192677	278512	protein degradation	mitochondrial metalloprotease
YGL004C	__________	-1.32	65964	50016	unknown	unknown
YGR115C	__________	+1.25	113629	141719	unknown	unknown; similar to Sly41p, questionable ORF
YHR131C	__________	+1.07	255856	274624	unknown	unknown
YJL004C	SYS1______	+1.33	130743	173390	secretion (putative)	unknown; overexpression suppresse mutation in ypt6
YKL004W	AUR1______	-1.39	831403	599170	sphingolipid metabolism	phosphatidylinositol:ceramide phosphoinositol transferase
YLL004W	ORC3______	-1.11	97033	87752	DNA replication	origin recognition complex, 62 kDa subunit
YLR310C	CDC25_____	+1.34	393857	529213	signaling	GDP/GTP exchange factor for Ras1p and Ras2p
YMR048W	__________	-1.11	102503	92171	unknown	unknown
YNL096C	RPS7B_____	-1.61	5274567	3285681	protein synthesis	ribosomal protein S7B
YOL004W	SIN3______	+1.62	216593	351562	transcription	transcriptional regulator
YOR214C	__________	+1.06	51061	54282	unknown	unknown
YPL193W	RSA1______	+1.40	154610	216388	ribosome biogenesis (putative)	unknown
YAR060C	__________	+1.66	113669	188437	unknown	identical to Yhr2p
YBL014C	RRN6______	-1.28	112015	87588	transcription	component of rDNA transcription factor complex
YBR277C	__________	-1.14	96564	84370	unknown	unknown
YDL016C	__________	-1.80	252831	140330	unknown	unknown
YDR146C	SWI5______	-1.33	122478	91932	cell cycle	transcription factor, regulates HO
YDR515W	SLF1______	-1.19	199228	166761	Cu2+ ion homeostasis	CuS biomineralization
YGL208W	SIP2______	+1.38	117235	161450	transcription	component of Snf1 protein complex
YHL012W	__________	+1.12	73870	83017	unknown	unknown; similar to UTP glucose-1-phosphate
YIL106W	MOB1______	+1.25	219065	274065	mitosis	unknown; binds Mps1p and Dbf2p
YJL209W	CBP1______	+1.24	139838	173161	mRNA stability, COB mRNA	unknown
YKL205W	LOS1______	-1.06	691810	650832	tRNA splicing	nuclear pore protein
YLR139C	SLS1______	-1.10	83217	75447	mitochondrial metabolism	integral membrane protein
YML013W	__________	+1.94	70301	136324	unknown	unknown
YMR241W	YHM2______	-1.08	618363	570354	unknown	suppresses HM mutant
YNL298W	CLA4______	+1.51	532584	805001	cytokinesis	protein kinase
YOR038C	HIR2______	+1.08	82259	89163	transcription	histone transcription inhibitor
YPL016W	SWI1______	-1.12	56419	50553	transcription	component of SWI/SNF global activator complex
YPR111W	DBF20_____	+1.41	99542	139896	cell cycle	M phase; protein kinase
YBR088C	POL30_____	-1.17	299315	256880	DNA replication	DNA polymerase processivity factor
YCR025C	__________	+1.05	72381	75942	unknown	unknown
YDL206W	__________	+1.19	98871	118136	unknown	unknown; similar to transporter proteins
YDR325W	YCG1______	+1.07	164286	176081	mitosis, chromosome condensation (putative)	unknown; high copy suppressor of brn1 mutation
YER028C	__________	+1.07	115180	123424	unknown	unknown; similar to Mig2p
YGL016W	KAP122____	-1.14	208621	182202	drug resistance	karyopherin-beta family protein
YGR127W	__________	+1.03	152029	155941	unknown	unknown; similar to mouse T10 protein PIR:S37448
YHR141C	RPL42B____	-3.32	10994788	3313356	protein synthesis	ribosomal protein L42B
YJL016W	__________	+1.42	193512	275633	unknown	unknown
YKL015W	PUT3______	-1.29	240317	186170	transcription	positive regulator of PUT genes
YLL016W	SDC25_____	-2.20	71541	32520	signaling (putative)	GDP/GTP exchange factor for Ras
YLR321C	SFH1______	-1.30	208264	159706	chromatin structure	chromatin remodeling complex subunit
YMR058W	FET3______	+1.31	160166	210046	transport	cell surface ferroxidase
YNL108C	__________	-1.24	279553	225940	unknown	unknown
YOL016C	CMK2______	+5.09	423059	2154133	signaling	calmodulin-dependent protein kinase
YOR226C	ISU2______	-1.74	387508	222900	iron homeostasis	unknown; similar to iron-sulfur cluster protein nifU
YPL205C	__________	+1.99	110899	220342	unknown	unknown
YBL026W	LSM2______	-1.10	292840	267407	mRNA splicing	core snRNP protein
YBR289W	SNF5______	-1.07	1687737	1570434	transcription	component of SWI/SNF global activator complex
YDL028C	MPS1______	-1.30	199648	153146	mitosis, checkpoint	protein kinase
YDR158W	HOM2______	-1.86	2784808	1498146	threonine and methionine biosynthesis	aspartate-semialdehyde dehydrogenase
YDR527W	__________	+1.02	195274	199320	unknown	unknown
YGL220W	__________	-1.01	360817	358742	unknown	unknown; similar to Vibrio alginolyticus bolA protein
YHL024W	RIM4______	+1.35	71760	96571	sporulation (putative)	unknown; N-terminus has putative RNA binding domain
YIL118W	RHO3______	-1.25	38230	30635	cytoskeleton	GTP-binding protein, rho family
YJL221C	FSP2______	+1.62	102598	166022	unknown	unknown; similar to maltase
YKL217W	JEN1______	+2.30	54334	124740	transport	lactate transporter
YLR151C	PCD1______	+1.61	48056	77163	unknown	nudix hydrolase family
YMR253C	__________	-1.06	46491	44009	unknown	major facilitator superfamily
YNL310C	__________	-1.23	260974	211777	unknown	unknown
YOR050C	__________	+1.45	103095	149081	unknown	unknown
YPL028W	ERG10_____	+1.71	1077073	1841560	sterol metabolism	acetoacetyl CoA thiolase
YPR123C	__________	+1.35	83377	112297	unknown	unknown
YBR099C	__________	-1.18	85561	72403	unknown	unknown
YCR036W	RBK1______	+1.01	79091	79871	ribose metabolism	ribokinase
YDL218W	__________	-1.18	86041	72878	unknown	unknown
YDR337W	MRPS28____	-1.56	299044	192147	protein synthesis	ribosomal protein, mitochondrial S28
YER039C	HVG1______	+1.10	79056	86979	protein glycosylation (putative)	nucleotide sugar transporter (putative)
YGL028C	SCW11_____	-1.28	514909	403627	cell wall biogenesis	glucanase (putative)
YGR139W	__________	-1.12	91488	81973	unknown	unknown
YHR152W	SPO12_____	-1.07	347921	324376	meiosis; mitotic cell cycle	unknown
YJL028W	__________	+1.18	62792	73815	unknown	unknown
YKL027W	__________	+1.43	380456	542883	unknown	unknown; similar to E. coli molybdopterin-converting factor
YLL028W	TPO1______	+1.64	282278	462640	transport	polyamine transport protein
YLR333C	RPS25B____	-1.35	7711340	5721852	protein synthesis	ribosomal protein S25B

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YMR070W	MOT3______	+1.14	240098	273107	mating	transcriptional regulator of pheremone-responsive genes
YNL120C	__________	+1.11	158925	176259	unknown	unknown
YOL028C	YAP7______	+1.68	139510	234816	transcription	basic leucine zipper transcription factor
YOR238W	__________	+1.37	248659	341492	unknown	unknown
YPL217C	BMS1______	+1.05	1274020	1331479	unknown	unknown; essential
YBL038W	MRPL16____	-1.48	77070	52240	protein synthesis	ribosomal protein, mitochondrial L16
YBR301W	__________	+2.13	199499	425619	unknown	unknown; similar to Ykl224p and other members of the PAU1
YDL040C	NAT1______	+1.13	296275	333405	protein processing	protein N-acetyltransferase subunit
YDR170C	SEC7______	+1.50	543787	815575	secretion	vesicle coat component
YDR539W	__________	+1.53	277744	425518	unknown	unknown
YFL033C	RIM15_____	+1.77	338832	599198	meiosis	protein kinase
YGL231C	__________	+1.10	423695	465921	unknown	unknown
YHL035C	__________	+1.93	960572	1850883	unknown	unknown; ATP-binding cassette (ABC) superfamily
YIL130W	__________	+1.39	517245	718899	unknown	unknown; similar to transcription factors
YJR009C	TDH2______	+1.03	15733592	16168699	glycolysis	glyceraldehyde-3-phosphate dehydrogenase 2
YKR004C	ECM9______	-2.50	1100967	440762	cell wall biogenesis	unknown
YLR161W	__________	+1.18	564239	665334	unknown	unknown
YML035C	AMD1______	+1.04	278626	291016	protein glycosylation	alpha-mannosidase, putative
YMR265C	__________	+1.41	262290	369372	unknown	unknown
YNL322C	KRE1______	+1.60	720268	1151094	cell wall biogenesis	beta-1,6-glucan assembly
YOR062C	__________	-1.08	80374	74459	unknown	unknown
YPL040C	ISM1______	+1.92	192570	369694	protein synthesis	tRNA synthetase, mitochondrial, isoleucyl
YPR135W	CTF4______	-1.11	63799	57489	DNA replication	polymerase alpha binding protein
YBR110W	ALG1______	+1.51	201958	305253	protein glycosylation	beta-1,4-mannosyltransferase
YCR048W	ARE1______	+1.22	59706	72965	sterol metabolism	acyl-CoA sterol acyltransferase
YDL230W	PTP1______	+1.70	109572	186611	unknown	protein phosphatase
YDR349C	YPS7______	+1.58	367525	579017	protein degradation	GPI-anchored aspartic protease
YER049W	__________	+2.00	371528	744679	unknown	unknown
YGL040C	HEM2______	+1.40	313477	439647	heme biosynthesis	porphobilinogen synthase
YGR151C	__________	+1.12	170035	190371	unknown	unknown
YHR164C	DNA2______	+1.61	206208	331470	DNA replication	DNA helicase
YJL041W	NSP1______	+1.42	489870	695465	nuclear protein targeting	nuclear pore protein
YKL038W	RGT1______	+1.31	72788	95046	(glucose) transport	transcriptional regulator of glucose transporters
YLL040C	VPS13_____	-1.91	153756	80614	vacuolar protein targeting	component of peripheral membrane protein complex
YLR345W	__________	+2.13	112954	240489	unknown	unknown
YMR081C	ISF1______	+1.35	101168	137055	RNA splicing, mitochondrial	interacts with Nam7p
YNL132W	__________	-1.01	438547	433351	unknown	unknown; similar to Achlya ambisexualis antheridiol steroid
YOL040C	RPS15_____	-1.45	13562565	9350107	protein synthesis	ribosomal protein S15
YOR250C	CLP1______	+1.15	296393	340792	mRNA 3'-end processing	cleavage/polyadenylation factor CF IA component
YPL229W	__________	+2.75	409366	1124026	unknown	unknown
YBL050W	SEC17_____	+1.11	406157	449771	secretion	SNAP; vesicle fusion
YDL052C	SLC1______	-1.05	169620	161975	phospholipid metabolism	fatty acyltransferase
YFL043C	__________	-1.13	133776	118179	unknown	unknown
YGL243W	TAD1______	-1.20	135213	112247	tRNA processing	tRNA-specific adenosine deaminase
YIL142W	CCT2______	-1.16	1345408	1158547	protein folding	cytoplasmic chaperonin complex
YJR020W	__________	+1.08	76477	82827	unknown	unknown
YKR016W	__________	+1.45	377262	547804	unknown	unknown
YLR173W	__________	+1.10	65024	71616	unknown	unknown
YML045W	__________	+2.38	5652693	13475954	unknown	unknown
YMR277W	FCP1______	+1.22	343190	420257	transcription	TFIIF interacting component of CTD phosphatase
YNL334C	SNO2______	+1.50	177979	266114	unknown	unknown; induced in stationary phase
YOR074C	CDC21_____	+1.00	306826	307566	DNA replication	thymidylate synthase
YPL052W	__________	+1.41	268015	378620	unknown	unknown
YPR145W	ASN1______	+1.11	3042102	3388793	asparagine biosynthesis	asparagine synthetase
YBR122C	MRPL36____	-1.12	204099	182904	protein synthesis	ribosomal protein, mitochondrial L36
YCR060W	__________	+1.01	254062	255519	unknown	unknown; similar to stress inducible protein Sti1p, has
YDL242W	__________	+1.03	46847	48174	unknown	unknown
YDR361C	__________	-2.09	600962	287663	unknown	unknown
YER060W	FCY21_____	+1.01	216171	217695	transport	purine-cytosine permease
YGL052W	__________	+1.16	105169	122132	unknown	unknown
YHR176W	__________	+1.45	69919	101384	unknown	unknown; similar to flavin-containing monooxygenases
YJL053W	PEP8______	+1.33	241197	320032	vacuolar protein targeting	vacuolar peripheral memebrane protein
YKL050C	__________	+1.13	55396	62631	unknown	unknown
YLL052C	AQY2______	+3.38	1881590	6363922	transport, water	aquaporin (putative)
YLR357W	RSC2______	+1.38	82657	114179	chromatin structure	chromatin remodeling complex subunit
YMR092C	AIP1______	+1.66	105330	174580	cytoskeleton	actin cortical patch component
YNL144C	__________	+1.37	83948	114887	unknown	unknown
YOL052C	SPE2______	+1.01	337639	340848	polyamine metabolism	S-adenosylmethionine decarboxylase
YOR262W	__________	+1.00	273891	274723	unknown	unknown
YPL241C	CIN2______	-1.09	157645	144910	mitosis, chromosome segregation	unknown
YBL062W	__________	+1.11	240189	266616	unknown	unknown
YDL064W	UBC9______	-1.56	422241	270489	protein degradation, ubiquitin-mediated	E2 ub.-conjugating enzyme
YDR191W	HST4______	-1.38	102566	74293	silencing (telomere)	unknown; similar to nuclear lamins
YFL055W	AGP3______	+1.74	65839	114544	transport	general amino acid permease
YGL255W	ZRT1______	+1.28	823792	1056729	transport	high-affinity zinc transporter
YHR006W	STP2______	+2.23	217103	483848	tRNA splicing	unknown
YIL154C	(IMP2)____	+1.42	325308	462206	stress response	transcriptional repressor
YJR031C	GEA1______	+1.27	326261	412824	secretion	GDP/GTP exchange factor for ARF
YKR028W	SAP190____	-1.64	810484	492748	cell cycle	Sit4p-associated protein
YLR185W	RPL37A____	-1.56	5828523	3727179	protein synthesis	ribosomal protein L37A
YMR289W	__________	+1.26	178208	225115	unknown	unknown
YNR007C	AUT1______	+1.81	119022	214836	autophagy	unknown
YOR086C	__________	+1.67	593968	993402	unknown	unknown
YPL062W	__________	+1.11	52446	58185	unknown	unknown
YPR157W	__________	+1.44	144345	208003	unknown	unknown
YBR134W	__________	-1.27	72614	57130	unknown	unknown
YCR071C	IMG2______	-1.02	181196	177100	mitochondrial DNA maintenance	unknown
YDR006C	SOK1______	+1.57	235875	369485	unknown	suppressor of a cAMP-dependent protein kinase mutant
YDR371W	__________	-1.14	155992	136442	unknown	unknown; similar to chitinases
YGL064C	__________	+1.03	122377	125611	unknown	unknown
YGR171C	MSM1______	+1.19	159373	189355	protein synthesis	tRNA synthetase, mitochondrial, methionyl
YHR188C	__________	+1.36	439073	595924	unknown	unknown
YJL065C	__________	+1.23	259995	318679	unknown	unknown; similar to DNA polymerase epsilon subunit c
YKL062W	MSN4______	+2.02	170194	343601	transcription	transcriptional activator with Snf1p
YLL064C	__________	+2.69	265813	714333	unknown	unknown; similar to members of the PAU1 family
YLR369W	SSQ1______	+1.47	190109	278838	DNA replication (mitochondrial)	mitochondrial HSP70
YMR104C	YPK2______	+2.76	53627	147772	unknown	protein kinase
YNL156C	__________	+1.89	312914	590317	unknown	unknown
YOL062C	APM4______	+1.49	491820	734605	secretion	vesicle coat component
YOR274W	MOD5______	+1.73	203813	353341	tRNA processing	tRNA isopentenyltransferase

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YPL252C	YAH1______	-1.43	505415	353271	unknown	unknown; similar to adrenodoxin and ferrodoxin
YMR319C	FET4______	+3.09	225007	695477	transport	iron transporter
YBL074C	AAR2______	+1.29	61031	78599	mRNA splicing, MATa1	unknown
YDL076C	__________	+1.23	206225	252945	unknown	unknown
YDR203W	__________	+1.06	89404	95013	unknown	unknown
YFL067W	__________	+3.41	597276	2037708	unknown	unknown; similar to periodic clock protein
YGR004W	__________	+1.45	126081	182405	unknown	unknown
YHR018C	ARG4______	-1.08	1512564	1403688	arginine biosynthesis	argininosuccinate lyase
YIL165C	__________	-1.00	186015	185381	unknown	unknown; similar to nitrilases, putative pseudogene
YJR043C	POL32_____	-1.08	298270	275996	DNA replication	polymerase delta 55 kD subunit
YKR040C	__________	-1.01	160711	159429	unknown	unknown
YLR197W	SIK1______	-1.38	3235625	2347738	rRNA processing	nucleolar protein
YMR299C	__________	+1.42	148165	211108	unknown	unknown
YNR019W	ARE2______	+1.12	45021	50448	sterol metabolism	acyl-CoA sterol acyltransferase
YOR098C	NUP1______	+1.46	366623	536041	nuclear protein targeting	nuclear pore protein
YPL074W	YTA6______	+1.04	79327	82834	unknown	unknown; AAA ATPase family
YPR165W	RHO1______	+1.42	2302543	3280940	signaling	GTP-binding protein, rho family
YBR146W	MRPS9_____	-1.67	180696	108142	protein synthesis	ribosomal protein, mitochondrial S9
YCR084C	TUP1______	+1.21	503286	608663	transcription	general repressor
YDR018C	__________	+1.32	59388	78547	unknown	unknown; similar to Ybr042p
YDR383C	__________	-1.08	122303	113520	unknown	unknown
YER080W	__________	+1.12	310180	348251	unknown	unknown
YGL076C	RPL7A_____	-1.17	3058719	2620516	protein synthesis	ribosomal protein L7A
YGR183C	QCR9______	+2.56	384898	985988	oxidative phosphorylation	ubiquinol cytochrome-c reductase subunit 9
YHR200W	RPN10_____	+1.31	951610	1246332	protein degradation	26S proteasome subunit
YJL077C	ICS3______	+1.77	162586	288149	Cu2+ ion homeostasis (putative)	unknown
YKL074C	MUD2______	+1.38	192738	266058	mRNA splicing	commitment complex component
YLR009W	__________	-1.68	1525224	907638	protein synthesis	ribosomal protein L24B (putative)
YLR381W	__________	+1.51	167033	251716	unknown	unknown
YNL168C	__________	-1.02	271550	265967	unknown	unknown; similar to E. coli hpcE gene product which is
YOL074C	__________	+1.14	61781	70565
YOR286W	__________	-1.56	565246	361733	unknown	unknown; similar to Drosophila melanogaster heat shock
YPL262W	FUM1______	+1.32	1017246	1342770	TCA cycle	fumarate hydratase
YBL086C	__________	+1.06	75298	79999	unknown	unknown
YDL088C	ASM4______	+1.06	198444	209397	unknown	unknown; suppresses ts mutations in pol3
YDR211W	GCD6______	+1.41	287150	404789	protein synthesis	translation initiation factor eIF2b subunit
YFR011C	__________	+1.20	271200	324892	unknown	unknown
YGR016W	__________	+1.02	98813	101231	unknown	unknown
YHR029C	__________	-1.36	650790	478626	unknown	unknown; similar to thymidylate synthase in the N-terminal
YIL176C	__________	+2.52	337464	851312	unknown	unknown; similar to members of the PAU1 family
YJR055W	HIT1______	+1.18	151840	179601	unknown	required for growth at high temperature
YKR052C	MRS4______	+1.36	167031	227770	transport	mitochondrial carrier
YLR209C	__________	+1.20	391227	469244	unknown	unknown; similar to human purine nucleoside phosphorylase
YML079W	__________	-1.13	532145	470473	unknown	unknown
YMR309C	NIP1______	-1.01	937622	925471	nuclear protein targeting	unknown, similar to NSR1
YNR031C	SSK2______	+1.36	213817	290337	signaling, high osmolarity pathway	MAPKKK (mitogen-activated protein kinase kinase kinase)
YOR110W	TFC7______	-1.01	253938	250283	transcription	TFIIIC subunit
YPL086C	ELP3______	+1.04	511576	530689	chromatin structure	histone acetyltransferase complex subunit
YPR177C	__________	+1.45	103230	149230	unknown	unknown
YBR158W	CST13_____	-1.06	697434	659229	Cu2+ ion homeostasis (putative); chromosome stability	unknown; required for optimal growth
YCR095C	__________	+1.00	157007	157735	unknown	unknown
YDR030C	RAD28_____	-1.09	67973	62130	DNA repair	unknown
YDR395W	SXM1______	+1.13	396558	446258	mRNA export; nuclear protein targeting	karyopherin
YER091C	MET6______	+1.77	250587	442850	methionine biosynthesis	homocysteine methyltransferase
YGL088W	__________	-1.57	77832	49674	unknown	unknown; similar to Cyanophora paradoxa ribosomal protein
YGR195W	SKI6______	+1.01	531389	536496	rRNA processing	exoribonuclease
YHR212C	__________	+1.46	136627	199095	unknown	unknown; identical to Yar060p/Raa19p
YJL089W	SIP4______	+2.19	87121	190998	glucose derepression	transcription factor
YKL086W	__________	+3.02	67828	205011	unknown	unknown
YLR021W	__________	-1.13	254632	224946	unknown	unknown
YLR393W	ATP10_____	+1.66	56490	94046	ATP synthesis	F1F0 ATPase complex assembly
YMR127C	SAS2______	-1.04	183994	176125	silencing	zinc-finger protein
YNL180C	RHO5______	+1.24	507300	631504	signaling	Rho family GTPase
YOL086C	ADH1______	+1.04	15526898	16092734	glycolysis	alcohol dehydrogenase I
YOR298W	__________	-1.47	439736	299103	unknown	meiosis (putative)
YPL274W	SAM3______	+1.04	117618	122663	transport, amino acid	high affinity S-adenosylmethionine permease
YAL005C	SSA1______	+1.93	1908354	3678957	ER and mitochondrial translocation	cytosolic HSP70
YBR170C	NPL4______	+1.26	159134	200341	nuclear protein targeting	nuclear pore protein
YCR107W	AAD3______	+1.61	1444869	2322190	unknown	hypothetical aryl-alcohol dehydrogenase
YDR041W	__________	-1.03	326542	316213	protein synthesis	ribosomal protein, mitochondrial
YDR408C	ADE8______	+1.03	410345	421986	purine biosynthesis	phosphoribosylglycinamide formyltransferase
YER103W	SSA4______	+2.25	299661	674673	ER and mitochondrial translocation	cytosolic HSP70
YGL101W	__________	-1.96	241666	123207	unknown	unknown
YGR208W	SER2______	-1.22	475814	388801	glycine, serine, and threonine metabolism	phosphoserine phosphatase
YIL005W	__________	+1.11	184727	204751	unknown	unknown; similar to protein disulfide
YJL102W	MEF2______	+1.83	82451	151214	protein synthesis	translation elongation factor, mitochondrial
YKL098W	__________	+1.39	169210	235562	unknown	unknown
YLR034C	SMF3______	+1.49	160204	238846	transport (putative)	metal transporter (putative)
YLR406C	RPL31B____	+1.08	57621	62340	protein synthesis	ribosomal protein L31B
YMR139W	RIM11_____	+1.48	179217	265763	meiosis	protein kinase
YNL193W	__________	-1.01	120379	119069	unknown	unknown
YOL099C	__________	+2.32	230048	534443	unknown	unknown
YOR309C	__________	-1.34	3328284	2480522	unknown	unknown
YPR004C	__________	+1.25	495819	619927	unknown	unknown; similar to human electron transport flavoprotein
YBL099W	ATP1______	+1.88	830078	1557873	ATP synthesis	mitochondrial F1F0-ATPase subunit
YCL004W	PGS1______	-1.56	113216	72560	phospholipid metabolism	phosphatidylglycerophosphate synthase
YDL101C	DUN1______	-1.08	199493	185082	DNA repair	DNA damage-responsive protein kinase
YDR224C	HTB1______	-1.66	3463904	2090649	chromatin structure	histone H2B
YEL005C	VAB2______	-1.89	220542	116733	vacuolar protein targeting (putative)	unknown; Vac8p binding protein
YFR024C	__________	+1.26	320661	402568	unknown	unknown
YHR041C	SRB2______	+1.08	145198	157155	transcription	RNA polymerase II mediator subunit
YIR012W	SQT1______	+1.08	671209	725486	ribosome biogenesis (putative)	unknown
YJR068W	RFC2______	+1.03	334906	344356	DNA replication	replication factor C 41 kD subunit
YKR065C	__________	-1.06	380633	359131	unknown	unknown
YLR222C	__________	-1.25	449177	359364	unknown	unknown
YML092C	PRE8______	+1.29	890114	1147827	protein degradation	20S proteasome subunit Y7 (alpha2
YNL005C	MRP7______	-1.33	348160	261332	protein synthesis	ribosomal protein, mitochondrial large subunit
YNR044W	AGA1______	+1.21	199586	241652	mating	a-agglutinin anchor subunit
YOR123C	LEO1______	+1.24	273105	339001	unknown	unknown
YPL099C	__________	+1.08	157205	169229	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YPR190C	RPC82_____	+1.05	518221	544611	transcription	RNA polymerase III 82 kD subunit
YAL018C	__________	-1.67	74771	44859	unknown	unknown
YBR182C	SMP1______	+2.00	101664	202977	cell wall organization	MADS box transcription factor
YCRX12W	__________	-1.15	85710	74573
YDR053W	__________	-1.28	80664	63022	unknown	unknown
YDR420W	HKR1______	+1.32	215364	283763	cell wall biogenesis (putative)	unknown; cell surface protein
YER115C	SPR6______	-1.30	240323	184795	sporulation	unknown
YGL113W	__________	+1.18	89897	105742	unknown	unknown
YGR220C	MRPL9_____	-1.31	385794	294452	protein synthesis	ribosomal protein, mitochondrial L9
YIL016W	SNL1______	-1.86	408132	219687	nuclear protein targeting	nuclear pore protein (putative)
YJL114W	__________	-1.53	76069	49666	unknown	unknown
YKL110C	KTI12_____	+1.14	274093	311387	killer toxin resistance	unknown
YLR044C	PDC1______	+1.16	13274522	15347856	glycolysis	pyruvate decarboxylase
YLR416C	__________	-1.57	107358	68300	unknown	unknown
YMR151W	YIM2______	-1.08	87468	80976	unknown	unknown
YNL205C	__________	-1.05	73859	70020	unknown	unknown
YOL109W	ZEO1______	-1.21	5461053	4495912	zeocin resistance	unknown
YOR321W	PMT3______	-1.17	225482	193527	protein glycosylation	dolichyl phosphate-D-mannose:protein O-D-mannosyltransferase
YPR016C	TIF6______	+1.09	73989	80977	ribosome biogenesis (putative)	unknown; similar to human translation initiation factor 6 (eIF6)
YBL109W	__________	+1.02	162200	165039	unknown	unknown
YCL017C	NFS1______	+1.06	357193	378558	tRNA splicing	unknown
YDL113C	__________	+1.18	125953	149017	unknown	unknown
YEL017C	PMP2______	-1.36	827307	608480	H+ homeostasis	regulates plasma membrane H+-ATPase
YFR034C	PHO4______	+1.00	132679	133318	phosphate signaling	transcription factor
YHR052W	__________	-1.56	709191	453792	unknown	unknown
YIR022W	SEC11_____	-1.15	315328	273689	secretion	signal peptidase subunit
YJR080C	__________	+1.56	142656	222777	unknown	unknown; similar to Arg8p
YKR077W	__________	+1.15	157795	182016	unknown	unknown
YLR232W	__________	-1.19	34593	29066	unknown	unknown
YNL017C	__________	-1.13	61482	54624	unknown	unknown
YNR056C	BIO5______	+1.43	77268	110150	biotin biosynthesis	transmembrane regulator of KAPA/DAPA transport
YOR135C	__________	+1.78	169391	301350	unknown	unknown
YPL111W	CAR1______	+2.68	277114	743191	arginine metabolism	arginase
YPR202W	__________	+1.37	369373	504279	unknown	unknown; similar to other subtelomerically-encoded proteins
YAL029C	MYO4______	-1.54	71572	46387	cell polarity	myosin; asymmetric HO expression
YBR194W	__________	-1.60	138773	86576	unknown	unknown
YDR065W	__________	-1.12	101027	90297	unknown	unknown
YDR432W	NPL3______	+1.32	250753	330171	mRNA export; protein import	nuclear shuttling protein
YER126C	__________	-1.23	305911	248669	unknown	unknown
YGL125W	MET13_____	+1.03	119282	122989	methionine metabolism	methylenetetrahydrofolate reductase, putative
YGR232W	NAS6______	-1.07	225222	210726	protein degradation (putative)	unknown; interacts with 26S proteasome
YIL028W	__________	+1.14	46563	53208	unknown	unknown
YJL126W	NIT2______	+1.24	93182	115832	unknown	nitrilase
YKL122C	SRP21_____	-1.22	358835	293061	secretion	signal recognition particle subunit
YLR056W	ERG3______	+1.12	1452265	1632926	sterol metabolism	C-5 sterol desaturase
YLR426W	__________	+1.26	176903	222678	unknown	unknown; similar to Fox2p, E. coli 3-oxoacyl-[acyl-carrier
YMR161W	HLJ1______	-1.24	70728	57027	unknown	unknown; similar to E. coli DnaJ
YNL217W	__________	+1.10	534700	589691	unknown	unknown
YOL121C	RPS19A____	-1.53	7926200	5184609	protein synthesis	ribosomal protein S19A
YOR333C	__________	-1.33	124806	93989	unknown	unknown
YPR028W	YIP2______	-1.35	1263531	937789	unknown	unknown; interacts with Ypt protein(s)
YBR008C	FLR1______	+1.83	304465	558284	fluconazole resistance	transporter, major facilitator superfamily
YCL029C	BIK1______	+1.42	139621	197816	mating; mitosis	microtubule-associated protein
YDL125C	HNT1______	+1.44	783672	1130856	unknown	unknown; similar to protein kinase C inhibitor-I
YEL028W	__________	-1.50	83199	55538	unknown	unknown
YFR045W	__________	-1.10	125113	113818	unknown	unknown; similar to mitochondrial carrier family protein Ctp1p
YGR046W	__________	+1.73	184136	317771	unknown	unknown; similar to phage 1C ANTP-139 protein PIR:S46430
YHR063C	__________	-1.19	375110	315192	unknown	unknown; similar to Cbs2p
YIR033W	MGA2______	+1.50	575476	863054	transcription	chromatin remodeling (putative)
YJR093C	FIP1______	+1.07	258221	275209	mRNA polyadenylation	interacts with poly(A) polymerase
YKR089C	__________	+1.23	700548	864370	unknown	unknown
YLR244C	MAP1______	+1.59	422964	672121	protein processing	methionine aminopeptidase
YML113W	DAT1______	+1.17	791323	928361	transcription (putative)	oligo(dA)/oligo(dT)-binding protein
YNL029C	KTR5______	-1.11	127568	115234	protein glycosylation	putative mannosyltransferase
YNR068C	__________	-1.09	73205	67381	unknown	unknown
YOR145C	__________	-1.26	1330483	1057450	unknown	unknown
YPL123C	RNY1______	+1.57	122429	192354	unknown	ribonuclease, T2 family
YAL039C	CYC3______	+2.41	385952	929537	cytochrome c biosynthesis	cytochrome c heme lyase
YBR206W	__________	-1.22	313343	256300	unknown	unknown
YDR077W	SED1______	+3.25	4782498	15526383	unknown	putative cell surface glycoprotein
YDR444W	__________	-1.05	275862	262450	unknown	unknown
YGL137W	SEC27_____	+1.22	99821	122136	secretion	vesicle coat component
YGR244C	LSC2______	+1.94	837183	1622311	TCA cycle	succinyl-CoA ligase
YIL040W	__________	-1.45	357259	246790	unknown	unknown
YJL138C	TIF2______	-1.11	7411538	6657459	protein synthesis	translation initiation factor eIF4A
YKL134C	OCT1______	-1.59	180316	113572	mitochondrial protein targeting	mitochondrial intermediate peptidase
YLR068W	__________	-1.94	316686	163467	unknown	unknown
YLR438W	CAR2______	+3.02	177227	534389	arginine metabolism	ornithine aminotransferase
YNL229C	URE2______	+1.23	360020	443792	catabolite repression	inhibitor of Gln3p regulator
YOL133W	HRT1______	-1.04	203344	194997	unknown	unknown; similar to C. elegans protein of unknown function
YPR040W	__________	+1.44	235834	338936	unknown	unknown
YBR018C	GAL7______	-1.36	65242	48015	galactose metabolism	gal-1-phosphate uridyl transferase
YCL041C	__________	-1.36	83933	61682	unknown	unknown; similar to human papilloma virus (HPV) E6 protein
YDL135C	RDI1______	+1.15	462158	531430	signaling	rho GDP dissociation inhibitor for Rho1p
YDR260C	SWM1______	+1.29	128720	166176	sporulation	unknown
YEL040W	UTR2______	-1.17	2000170	1715112	unknown	unknown
YFR057W	__________	-1.18	303446	257502	unknown	unknown
YGR058W	__________	+1.25	142693	177980	unknown	unknown
YHR073W	__________	+1.31	311962	408648	unknown	unknown; similar to human oxysterol-binding protein (OSBP)
YJR104C	SOD1______	-1.23	6276918	5109108	oxidative stress response	copper-zinc superoxide dismutase
YKR101W	SIR1______	+1.16	217061	250782	silencing	reulator of silencing at HML and HMR
YLR256W	HAP1______	+1.08	13567002	14640442	transcription	heme-dependent transcription factor
YNL039W	TFC5______	+1.12	306292	342735	transcription	TFIIIB 90 kD subunit
YOR157C	PUP1______	+1.14	1097528	1249823	protein degradation	20S proteasome subunit (beta2)
YPL135W	ISU1______	+2.02	570355	1154690	iron homeostasis	unknown; similar to iron-sulfur cluster protein nifU
YAL051W	OAF1______	-1.85	99645	53960	peroxisome proliferation	transcriptional activator of POX1
YBR218C	PYC2______	+1.05	585117	616451	TCA cycle	pyruvate carboxylase 2
YDR089W	__________	-1.25	116610	92943	unknown	unknown
YDR456W	NHX1______	-1.16	263035	226105	transport	Na+/H+ antiporter
YER147C	__________	+1.16	121768	141748	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YGL149W	__________	-1.08	67185	62325	unknown	unknown
YGR256W	GND2______	+1.57	862001	1357324	pentose phosphate cycle	6-phosphogluconate dehydrogenase
YIL052C	RPL34B____	-2.15	10853755	5051249	protein synthesis	ribosomal protein L34B
YJL150W	__________	-2.51	262069	104604	unknown	unknown
YKL146W	__________	+1.77	180323	319809	unknown	unknown; similar to members of a putative transporter family
YLR080W	__________	-1.01	77928	76892	unknown	unknown
YLR450W	HMG2______	+1.43	324947	463893	sterol metabolism	3-hydroxy-3-methylglutaryl-coenzyme A reductase
YMR183C	SSO2______	-1.10	890249	808282	secretion	post-Golgi t-SNARE
YNL241C	ZWF1______	+2.21	794330	1753817	pentose phosphate cycle	glucose-6-phosphate dehydrogenase
YOL145C	CTR9______	+1.32	693371	917986	mitosis, chromosome segregation	unknown
YOR355W	GDS1______	+1.79	511357	916662	respiration (putative)	unknown; suppresses nam9-1
YPR052C	NHP6A_____	+1.19	367478	438382	chromatin structure	non-histone protein
YBR030W	__________	-2.45	265230	108429	unknown	unknown; similar to Sin3p
YCL053C	__________	-1.89	506261	267293
YDL147W	RPN5______	+1.07	937536	1005822	protein degradation	26S proteasome subunit
YDR268W	MSW1______	-1.47	161393	109940	protein synthesis	tRNA synthetase, mitochondrial, Trp
YEL052W	AFG1______	+1.19	263671	314152	unknown	unknown; similar to members of the AAA family
YGR070W	ROM1______	+1.08	58545	63451	signaling	GDP/GTP exchange protein for Rho1p
YHR084W	STE12_____	+1.25	162032	202239	mating and pseudohyphal growth	transcription factor
YJR116W	__________	-1.24	242006	194941	unknown	unknown
YLR264W	RPS28B____	-1.79	5276678	2953172	protein synthesis	ribosomal protein S28B
YMR003W	__________	-1.59	171515	107661	unknown	unknown
YNL051W	__________	-1.06	82832	77871	unknown	unknown
YOR169C	__________	-2.37	1458595	616331	unknown	unknown
YPL147W	PXA1______	+1.02	93592	95490	transport	long-chain fatty acid transporter, ABC family
YBR230C	__________	+1.40	179916	252626	unknown	unknown
YDR099W	BMH2______	+1.07	1842792	1964381	unknown	suppresses clathrin deficiency
YDR468C	TLG1______	+1.10	268390	296341	endocytosis	late Golgi t-SNARE
YER158C	__________	+2.02	151880	306348	unknown	unknown; similar to Afr1p
YGL161C	__________	+1.30	245560	320343	unknown	unknown
YGR268C	__________	+2.78	176524	490273	unknown	unknown
YIL064W	__________	-1.56	629798	403349	unknown	unknown
YJL162C	__________	+1.39	247535	343050	unknown	unknown; similar to E. coli DnaJ and other DnaJ-like
YKL158W	__________	+1.65	57718	95004
YLR092W	SUL2______	+1.54	79637	122867	transport	sulfate permease
YLR462W	__________	+2.05	219265	449650	unknown	unknown
YNL253W	__________	+1.41	163797	230222	unknown	unknown
YOL157C	__________	+2.09	142965	298496	unknown	putative alpha-glucosidase
YOR367W	SCP1______	-1.04	257453	246632	cytoskeleton (putative)	calponin homolog
YPR064W	__________	+1.28	53439	68142	unknown	unknown
YBR042C	__________	-1.26	179970	142978	unknown	unknown
YCL065W	__________	-1.21	300721	248063	unknown	unknown
YDL159W	STE7______	+1.06	144899	153745	signaling, pheromone and pseudohyphal growth pathways	MAPKK (mitogen-activated protein kinase kinase)
YDR280W	RRP45_____	-1.81	506025	278999	rRNA processing	3'->5' exoribonuclease
YEL063C	CAN1______	+1.50	261507	392468	transport	basic amino acid permease
YGR082W	TOM20_____	-1.51	709783	470834	mitochondrial protein targeting	mito. import receptor
YHR096C	HXT5______	+1.54	517129	797084	transport	hexose permease
YJR128W	__________	+1.30	58914	76629	unknown	unknown
YLR276C	DBP9______	-1.22	722452	590482	unknown	putative RNA helicase
YMR015C	ERG5______	+1.28	685618	879495	sterol metabolism	C-22 sterol desaturase
YNL061W	NOP2______	+1.14	1262433	1442741	nuclear organization	nucleolar protein
YOR181W	LAS17_____	+1.50	183107	275524	cytoskeleton	cortical actin patch component
YPL159C	__________	+2.04	210372	428220	unknown	unknown
YAR010C	__________	-1.42	51883	36560	unknown	unknown
YBR242W	__________	+1.12	393165	439257	unknown	unknown
YDR111C	__________	+1.02	103196	105476	unknown	unknown; similar to alanine aminotransferase (GB:Z48758)
YDR480W	DIG2______	+1.78	75361	133802	invasive growth	negative regulator
YER167W	BCK2______	+1.93	225404	434342	signaling	protein kniase C pathway
YGL173C	KEM1______	+1.42	734233	1042140	mRNBA decay	DNA and RNA exonuclease
YGR280C	__________	-1.44	1025307	712931	unknown	unknown
YIL073C	SPO22_____	+1.54	196468	303023	sporulation	phospholipase A2, meiosis-specific
YJL174W	KRE9______	+1.62	717704	1162159	cell wall biogenesis	beta-1,6-glucan assembly
YKL170W	MRPL38____	-1.11	243228	219747	protein synthesis	ribosomal protein, mitochondrial L38
YLR104W	__________	+1.23	114021	140346	unknown	unknown
YMR206W	__________	+1.25	63776	79932	unknown	unknown
YNL265C	IST1______	+1.23	260123	321166	salt tolerance (putative)	unknown; similar to Nuf1p
YOR003W	YSP3______	+1.60	162416	260041	protein degradation	subtilisin-like protease III
YOR379C	__________	-1.08	77510	72007	unknown	unknown
YPR076W	__________	+2.46	82095	201565	unknown	unknown
YBR054W	YRO2______	+1.85	1028010	1897024	unknown	putative heat shock protein
YCLX04W	__________	+1.40	128573	180449
YDL171C	GLT1______	+1.25	999205	1249246	glutamate biosynthesis	glutamate synthase (NAPDPH) (GOGAT)
YDR292C	SRP101____	-1.26	75648	59970	secretion	signal recognition particle receptor subunit
YEL075C	__________	+1.81	135944	246451	unknown	unknown; similar to other subtelomerically-encoded proteins
YGR094W	VAS1______	+1.17	223677	261804	protein synthesis	tRNA synthetase, valyl
YHR108W	GGA2______	+1.23	845509	1043027	secretion (putative)	unknown; binds ARF
YJR140C	HIR3______	+1.50	403590	604666	transcription	regulator of histone transcription
YMR027W	HRT2______	+1.44	241994	349389	transposition, Ty3 (putative)	unknown
YNL073W	MSK1______	+1.35	180605	243673	protein synthesis	tRNA synthetase, mitochondrial, lysyl
YPL171C	OYE3______	+1.02	66794	67903	unknown	NAPDH dehydrogenase (old yellow enzyme)
YAR033W	__________	+1.03	122797	126575	unknown	unknown; similar to subtelomerically-encoded proteins
YBR254C	TRS20_____	-1.57	218811	139144	secretion (putative)	transport protein particle (TRAPP) subunit, 20 kD
YDR123C	INO2______	-1.22	110995	91090	phospholipid biosynthesis	transcription factor
YDR492W	__________	-1.65	481501	292535	unknown	unknown
YER178W	PDA1______	+1.04	1877783	1947420	glycolysis	pyruvate dehydrogenase
YGL185C	__________	-1.06	198898	187493	unknown	unknown; similar to D-2-hydroxyacid dehydrogenase
YGR292W	MAL12_____	-1.39	89316	64080	maltose utilization	alpha-glucosidase
YIL084C	SDS3______	+1.34	77093	103167	silencing	(putative) transcriptional regulator
YJL186W	MNN5______	+1.63	580275	946645	protein glycosylation	alpha-1,2-mannosyltransferase (putative)
YKL182W	FAS1______	+1.07	51512	54881	fatty acid metabolism	fatty-acyl-CoA synthase, beta subunit
YLR116W	MSL5______	+1.43	131840	188502	mRNA splicing	branchpoint bridging protein (commitment complex component)
YMR218C	TRS130____	+1.46	73256	107040	secretion	membrane targeting complex (TRAPP) subunit
YNL277W	MET2______	+2.00	127777	256038	methionine biosynthesis	homoserine O-acetyltransferase
YOR015W	__________	+1.23	369875	456687	unknown	unknown
YOR391C	__________	+1.64	71284	116988	unknown	unknown
YPR088C	SRP54_____	+1.18	842381	994444	secretion	signal recognition particle subunit
YBR066C	NRG2______	-1.22	54466	44714	unknown	unknown
YCR004C	YCP4______	-1.11	684189	616016	unknown	unknown; similar to S. pombe brefeldin A resistance protein
YDL183C	__________	-1.51	121624	80300	unknown	unknown
YDR304C	CYP5______	-1.47	360605	245181	protein folding	peptidyl-prolyl cis-trans isomerase

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YGR106C	__________	-1.83	1232460	673803	unknown	unknown; similar to Vibrio anguillarum chemotaxis methyl
YHR120W	MSH1______	-1.18	313582	266527	DNA repair	MutS homolog; mitochondrial DNA repair
YJR152W	DAL5______	+1.37	177237	242547	allantoin utilization	allantoate permease
YLR299W	ECM38_____	+2.17	157570	341687	glutathione biosynthesis	gamma-glutamyltransferase
YMR038C	LYS7______	-1.53	798883	523572	oxidative stress response	copper chaperone for superoxide dismutase Sod1p
YNL085W	MKT1______	+1.26	484016	609835	viral propagation	retroviral protease signature protein
YOR203W	__________	-1.68	226181	134418	unknown	unknown
YPL183C	__________	-1.36	929382	682170	unknown	unknown
YBL005W	TY1A______	+2.37	5410554	12845494	unknown	unknown
YBR266C	__________	+1.17	322933	377317	unknown	unknown
YDL005C	MED2______	-1.03	255188	248686	transcription	RNA polymerase II mediator subunit
YDR135C	YCF1______	+1.25	581225	727159	transport	vacuolar glutathione S-conjugate transporter
YDR504C	__________	+1.17	243690	284536	unknown	unknown
YFL003C	MSH4______	+1.13	127646	144292	meiosis, recombination	MutS homolog
YGL197W	MDS3______	-1.12	43817	39103	meiosis	gene expression regulator (putative)
YHL004W	MRP4______	+1.03	262654	270543	protein synthesis	ribosomal protein, mitochondrial small sunubit
YIL096C	__________	-1.23	293353	238559	unknown	unknown
YJL198W	__________	+1.56	132273	206258	unknown	unknown; similar to Pho87p, member of the phosphate
YKL194C	MST1______	+1.01	46858	47293	protein synthesis	tRNA synthetase, mitochondrial, threonyl
YLR128W	__________	-1.01	77175	76728	unknown	unknown
YML005W	__________	+1.28	93466	119487	unknown	unknown
YNL287W	SEC21_____	+1.19	855698	1021132	secretion	vesicle coat component
YOR027W	STI1______	+3.12	650541	2031359	protein folding	component of Hsp70-Hsp90 complexes
YPL005W	__________	+1.19	76400	90876	unknown	unknown
YPR100W	__________	-1.32	568523	431581	unknown	unknown
YBR078W	ECM33_____	+1.15	1592231	1829415	cell wall biogenesis	unknown
YCR016W	__________	-2.11	354011	167906	unknown	unknown
YDL195W	SEC31_____	-1.07	182262	170059	secretion	vesicle coat component
YDR316W	__________	-1.55	240102	154490	unknown	unknown
YER018C	SPC25_____	+1.24	162205	200614	cytoskeleton	spindle pole body component
YGL005C	__________	-1.71	184362	107983	unknown	unknown; similar to Xenopus kinesin-related protein Eg5
YGR116W	SPT6______	-1.05	178082	170006	transcription	elongation factor
YJL005W	CYR1______	-1.41	13539475	9627261	cell cycle	adenylate cyclase
YKL005C	__________	-1.35	185439	137579	unknown	unknown; similar to Drosophila transcription factor TFIIS,
YLL005C	__________	-1.12	153456	136944	unknown	unknown
YLR311C	__________	-1.28	63766	49677	unknown	unknown
YMR049C	__________	-1.18	350709	297738	unknown	unknown
YNL097C	PHO23_____	-1.01	128999	127535	phosphate signaling	transcriptional regulator of PHO5
YOL005C	RPB11_____	+1.05	450708	474812	transcription	RNA polymerase II subunit
YOR215C	__________	+1.34	258402	346804	unknown	unknown
YPL194W	DDC1______	+1.14	60720	68995	cell cycle, checkpoint	unknown
YAR061W	__________	+1.51	54939	82932	unknown	unknown; similar to N-terminus of Flo1p
YBL015W	ACH1______	+2.69	78055	210227	acetyl-CoA metabolism	acetyl-CoA hydrolase
YBR278W	DPB3______	-1.10	95395	86371	DNA replication	polymerase epsilon C subunit
YDL017W	CDC7______	+1.29	107597	138950	cell cycle	S phase protein kinase
YDR147W	EKI1______	+1.06	138954	147248	phospholipid metabolism	ethanolamine kinase
YDR516C	__________	+2.07	114301	236451	unknown	unknown; similar to Glk1p
YFL013C	__________	+1.92	111284	213753	unknown	unknown; similar to Ifh1p and Nab3p
YGL209W	MIG2______	-1.13	44392	39360	glucose repression	transcriptional repressor
YHL013C	__________	-1.43	259448	181454	unknown	unknown
YIL107C	PFK26_____	+2.65	95278	252091	fructose and mannose metabolism	6-Phosphofructose-2-kinase
YJL210W	PEX2______	+1.33	188803	251757	peroxisome biogenesis	integral membrane protein
YKL206C	__________	+1.27	197290	250508	unknown	unknown
YLR140W	__________	-1.05	50430	48091	unknown	unknown
YML014W	__________	-1.26	389473	309943	unknown	unknown; similar to Diptheria toxin resistance protein
YMR242C	RPL20A____	-1.86	8191538	4399638	protein synthesis	ribosomal protein L20A
YNL299W	TRF5______	-1.45	146102	100929	mitosis	related to DNA topoisomerase I
YOR039W	CKB2______	-1.13	580828	512099	salt tolerance	casein kinase II regulatory subunit
YPL017C	__________	-1.33	200987	150996	unknown	unknown; similar to Lpd1p
YPR112C	MRD1______	-1.00	63347	63140	unknown	unknown; similar to Pab1p, Pub1p, Nsr1p, Nop4p and other
YBR089W	__________	-1.25	337470	270314	unknown	unknown
YCR026C	__________	+1.11	119214	132364	unknown	unknown; similar to human plasma membrane glycoprotein PCI
YDL207W	GLE1______	+1.34	190055	254520	mRNA export	unknown
YDR326C	__________	-1.13	84956	75310	unknown	unknown
YER029C	SMB1______	-1.65	256442	155866	mRNA splicing	U1 snRNP protein
YGL017W	ATE1______	-1.18	153369	129924	protein synthesis	tRNA transferase, arginyl
YGR128C	__________	-1.33	246763	185794	unknown	unknown; similar to Haemophilus glutamate-ammonia-ligase
YHR142W	CHS7______	+1.46	414817	606174	cell wall biogenesis	ER membrane protein; chitin synthase export
YJL017W	__________	+2.21	99433	219944	unknown	unknown
YKL016C	ATP7______	+1.42	974476	1387413	ATP synthesis	F1F0-ATPase complex, FO D subunit
YLL017W	__________	-1.03	69191	67315	unknown	unknown
YLR322W	__________	-1.15	52849	46149	unknown	unknown
YMR059W	SEN15_____	-1.33	142895	107773	tRNA splicing	splicing endonuclease subunit
YNL109W	__________	-1.50	227614	151326	unknown	unknown
YOL017W	__________	+1.30	79026	103074	unknown	unknown
YOR227W	__________	+1.59	400542	637899	unknown	unknown
YPL206C	__________	+1.59	296138	470299	unknown	unknown; similar to Mycoplasma genitalium glycerophosphoryl
YBL027W	RPL19B____	-1.84	13521644	7350129	protein synthesis	ribosomal protein L19B
YBR290W	BSD2______	-2.25	390987	173853	transport	Cu(2+) transporter
YDL029W	ARP2______	+1.56	521677	815941	cytoskeleton	actin-related protein
YDR159W	SAC3______	-1.18	293398	248428	leucine transport	nuclear protein
YDR528W	HLR1______	-1.53	185002	121151	trehalose metabolism (putative)	unknown; pKA antagonist
YFL022C	FRS2______	-1.23	1009983	821502	protein synthesis	tRNA synthetase, phenylalanyl
YGL221C	NIF3______	+1.29	364751	471528	unknown	unknown
YHL025W	SNF6______	+1.46	347382	505471	transcription	component of SWI/SNF global activator complex
YIL119C	RPI1______	-1.50	87573	58472	signaling, Ras pathway	negative regulator of ras-cAMP pathway
YJL222W	VTH2______	+1.14	43491	49526	vacuolar protein targeting	unknown; similar to Vps10p
YKL218C	SRY1______	+1.70	244581	415888	serine metabolism	serine racemase
YLR152C	__________	+2.14	62243	133013	unknown	unknown; similar to Ecm3p
YNL311C	__________	+1.09	170512	186053	unknown	unknown
YOR051C	__________	-1.24	1038774	836447	unknown	unknown
YPL029W	SUV3______	+1.00	195985	196027	RNA processing, mitochondrial	RNA helicase
YPR124W	CTR1______	+1.69	644536	1088810	transport	copper transporter
YBR100W	__________	+1.08	89855	96906	unknown	unknown
YCR037C	PHO87_____	+1.27	85039	108050	transport	inorganic phosphate permease
YDL219W	__________	-1.47	274555	186823	unknown	unknown
YDR338C	__________	+1.26	82488	103916	unknown	unknown
YER040W	GLN3______	+1.05	137202	144345	nitrogen catabolite repression	transcription factor
YGL029W	CGR1______	-1.39	527450	378207	unknown	unknown; similar to human chromatin assembly factor I p150
YGR140W	CBF2______	-1.71	45052	26408	mitosis	kinetochore protein complex CBF3, 110 KD subunit

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YHR153C	SPO16_____	-1.09	59210	54109	meiosis, spore formation	unknown
YJL029C	VPS53_____	+1.56	186699	291754	vacuolar protein targeting (putative)	unknown
YKL028W	TFA1______	+1.35	275289	372195	transcription	TFIIE 66 kD subunit
YLL029W	__________	+2.40	191620	459024	unknown	unknown
YLR334C	__________	-1.05	477416	453934	unknown	unknown
YMR071C	__________	-1.13	492526	435319	unknown	unknown
YNL121C	TOM70_____	-1.04	373031	357521	mitochondrial protein targeting	outer membrane translocase component
YOL029C	__________	-1.01	319218	316362	unknown	unknown
YOR239W	ABP140____	+1.74	280149	486656	cytoskeleton	F-actin binding protein
YPL218W	SAR1______	-1.09	1679687	1547484	secretion	GTP-binding protein of the ARF family
YER189W	__________	-1.19	109495	92175	unknown	unknown; similar to subtelomerically-encoded proteins
YBL039C	URA7______	-1.05	712970	679467	pyrimidine biosynthesis	CTP synthase 1
YBR302C	COS2______	+2.59	566434	1467562	unknown	unknown; similar to subtelomerically-encoded proteins
YDL041W	__________	-1.11	73224	66258	unknown	unknown
YDR540C	__________	+1.01	88299	88886	unknown	unknown
YGL232W	__________	-1.57	250972	160216	unknown	unknown; similar to dihydropteroate synthase
YHL036W	MUP3______	+1.80	106524	191719	transport	methionine permease
YIL131C	FKH1______	-1.24	37964	30679	unknown	unknown; similar to Drosophila fork head protein
YJR010W	MET3______	+1.14	117785	134055	methionine biosynthesis	sulfate adenylyltransferase
YKR005C	__________	+1.35	60579	81748	unknown	unknown
YLR162W	__________	+1.19	346410	411605	unknown	unknown
YMR266W	__________	-1.11	57349	51479	unknown	unknown
YNL323W	BRE3______	+1.53	143438	218820	secretion (putative)	unknown; brefeldin A sensitive
YOR063W	RPL3______	+1.05	12047259	12663808	protein synthesis	ribosomal protein L3
YPL041C	__________	-1.17	164195	139957	unknown	unknown
YPR136C	__________	+1.24	152146	188106	unknown	unknown
YBR111C	YSA1______	-1.21	516444	426771	unknown	unknown; similar to Drosophila serendipity protein
YCR049C	__________	-1.31	73470	56276	unknown	unknown
YDL231C	BRE4______	+1.20	145200	173582	secretion (putative)	unknown; major facilitator superfamily; brefeldin A sensitive
YDR350C	TCM10_____	+1.93	172511	333471	unknown	unknown
YER050C	__________	-1.25	261740	210210	unknown	unknown
YGL041C	__________	-1.12	152983	136388	unknown	unknown
YGR152C	RSR1______	+1.82	201286	366988	bud site selection	GTP-binding protein, ras superfamily
YHR165C	PRP8______	+1.25	46634	58390	mRNA splicing	U4/U6, U5 snRNP protein
YJL042W	MHP1______	+2.13	46519	99055	cytoskeleton	microtubule-associated protein
YKL039W	PTM1______	+1.72	518817	890935	unknown	unknown; similar to Yhl017p, member of the major facilitator superfamily
YLL041C	SDH2______	+2.93	328670	964250	TCA cycle, oxidative phosphorylation	succinate dehydrogenase
YLR346C	__________	+1.29	67345	86943	unknown	unknown
YMR082C	__________	+1.03	42944	44072	unknown	unknown
YNL133C	__________	+1.28	106135	135547	unknown	unknown
YOL041C	NOP12_____	+1.13	67575	76492	unknown	unknown; nucleolar protein
YOR251C	__________	+1.33	387919	517566	unknown	unknown; similar to thiosulfate sulfurtransferases
YPL230W	USV1______	+2.09	104128	217605	unknown	unknown; expression increases upon starvation
YBL051C	__________	+1.47	252288	371379	unknown	unknown; similar to RNA-binding proteins, contains 1 RRM domain
YDL053C	__________	+1.37	243822	334109	unknown	unknown
YDR180W	SCC2______	-1.11	182223	164476	mitosis, sister chromatid cohesion	unknown; binds chromosomes
YFL044C	__________	+2.34	73284	171677	unknown	unknown
YGL244W	RTF1______	+1.00	272651	273642	transcription	regulator of Spt15 DNA binding properties
YHL047C	TAF1______	+1.88	92488	174128	transport	triacetylfusarinine C transporter
YIL143C	SSL2______	+1.45	166134	241267	transcription; DNA repair	TFIIH helicase
YJR021C	REC107____	+1.36	106390	144268	meiosis, recombination	ds break formation complex subunit
YKR017C	__________	+1.17	86053	100338	unknown	unknown
YLR174W	IDP2______	+4.13	60917	251329	TCA cycle	isocitrate dehydrogenase
YML046W	PRP39_____	+1.19	81409	96558	mRNA splicing	U1 snRNP protein
YMR278W	__________	+1.46	189068	275412	unknown	unknown; similar to phosphomannomutase
YNL335W	__________	+2.26	96175	217170	unknown	unknown; similar to Myrothecium verrucaria cyanamide hydratase
YOR075W	UFE1______	+1.05	188500	198060	secretion	ER membrane t-SNARE
YPL053C	KTR6______	+1.44	251889	362366	protein glycosylation	mannosylphosphate transferase
YPR146C	__________	+1.01	140218	142138	unknown	unknown
YBR123C	TFC1______	+1.01	165804	166715	transcription	TFIIIC 95 kD subunit
YCR061W	__________	+1.79	107350	191710	unknown	unknown
YDL243C	AAD4______	+1.41	1090319	1542414	unknown	hypothetical aryl-alcohol dehydrogenase
YDR362C	TFC6______	+1.17	153743	180197	transcription	TFIIIC 91 kD subunit
YGL053W	__________	+1.53	216851	332578	unknown	unknown
YHR177W	__________	+1.49	68077	101669	unknown	unknown
YJL054W	TIM54_____	+1.51	58051	87424	mitochondrial protein targeting	inner membrane translocase component
YKL051W	__________	+1.50	291418	437664	unknown	unknown
YLL053C	__________	+2.89	329441	953492	unknown	unknown; similar to putative aquaporin Ypr192p, member of
YLR358C	__________	+1.02	180928	183735	unknown	unknown
YMR093W	__________	-1.12	490853	437892	unknown	unknown
YNL145W	MFA2______	+1.08	68718	74313	mating	a-factor precursor
YOR263C	__________	+1.32	116534	153410	unknown	unknown; similar to adenosine A1 receptors
YPL242C	IQG1______	+1.21	55804	67307	cytoskeleton	IQGAP homolog
YBL063W	KIP1______	+1.18	62111	73101	mitosis, spindle assembly	kinesin related protein
YDL065C	PEX19_____	-1.02	217495	214043	peroxisome biogenesis	unknown
YDR192C	NUP42_____	-1.25	118179	94459	nuclear protein targeting	nuclear pore protein
YFL056C	AAD6______	+2.04	1431240	2914323	unknown	hypothetical aryl-alcohol dehydrogenase
YGL256W	ADH4______	+1.38	344605	476843	glycolysis	alcohol dehydrogenase IV
YHR007C	ERG11_____	+1.65	2278547	3758643	sterol metabolism	cytochrome P450 lanosterol 14a-demethylase
YIL155C	GUT2______	+3.95	112501	443846	glycerol metabolism	glycerol-3-phosphate dehydrogenase, mitochondrial
YJR032W	CPR7______	+1.32	394595	522175	protein folding	peptidyl-prolyl cis/trans isomerase
YKR029C	__________	+1.42	132901	188318	unknown	unknown; similar to E(z) Enhancer of zeste in the C-terminal
YLR186W	__________	-1.18	795656	672520	unknown	unknown
YMR290C	HAS1______	-1.12	1033918	921229	unknown	RNA helicase
YNR008W	LRO1______	+1.20	85520	102947	sterol metabolism (putative)	lecithin cholesterol acyl transferase (putative)
YOR087W	__________	+1.77	85447	151438	unknown	unknown
YPL063W	__________	-1.13	750188	661353	unknown	phosphatase
YPR158W	__________	+2.19	152828	334369	unknown	unknown
YBR135W	CKS1______	-1.07	638387	594577	cell cycle	portein kinase regulator
YCR072C	__________	-1.03	269238	262492	unknown	unknown; similar to nuclear mRNA processing protein Prp4p
YDR007W	TRP1______	+1.04	157437	164234	tryptophan biosynthesis	phosphoribosylanthranilate isomerase
YDR372C	__________	-1.12	272282	242304	unknown	unknown
YER069W	ARG5,6____	-1.30	275705	212463	arginine biosynthesis	acetylglutamate kinase and acetylglutamyl-phosphate reductase
YGL065C	ALG2______	-1.02	159714	156650	protein glycosylation	glycosyltransferase
YGR172C	YIP1______	+1.06	367743	388502	unknown	unknown; interacts with Ypt protein(s)
YHR189W	__________	+1.25	57166	71733	protein synthesis	tRNA hydrolase, peptidyl, putative
YJL066C	__________	+3.18	167233	530997	unknown	unknown
YKL063C	__________	-1.35	336953	250414	unknown	unknown
YLL065W	GIN11_____	+1.68	74445	125258	unknown	growth inhibitor
YLR370C	ARC18_____	+1.43	454652	648117	cytoskeleton	cortical actin patch integrity; Arp2/3 complex subunit

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YMR105C	PGM2______	+1.73	102950	177762	glycolysis	phosphoglucomutase
YNL157W	__________	+1.79	592984	1063478	unknown	unknown
YOL063C	__________	+1.17	77900	91249	unknown	unknown
YOR275C	__________	+1.68	130922	219325	unknown	unknown
YPL253C	VIK1______	+1.33	107920	143017	nuclear fusion (putative)	Kar3p interactor
YMR320W	__________	+1.22	54641	66683	unknown	unknown
YBL075C	SSA3______	+3.05	116997	356683	ER and mitochondrial translocation	cytosolic HSP70
YDL077C	VAM6______	+1.39	128382	178705	protein degradation	vacuolar carboxypeptidase Y
YDR204W	COQ4______	+1.33	162036	214916	ubiquinone biosynthesis	unknown
YFL068W	__________	+3.78	1191278	4508309	unknown	unknown; similar to other subtelomerically-encoded proteins
YGR005C	TFG2______	-1.29	487132	377506	transcription	TFIIF 54 kD subunit
YHR019C	DED81_____	-1.02	3306583	3252606	protein synthesis	tRNA synthetase, arparaginyl
YIL166C	__________	+1.52	121855	185549	unknown	unknown; major facilitator superfamily
YJR044C	__________	+1.37	363508	498560	unknown	unknown; similar to Drosophila yakuba NADH dehydrogenase
YKR041W	__________	+1.08	74768	80911	unknown	unknown
YLR198C	__________	-1.63	2378493	1461662	unknown	unknown
YML068W	__________	+1.09	164057	178383	unknown	unknown
YMR300C	ADE4______	-1.45	516561	356283	purine biosynthesis	amidophosphoribosyltransferase
YNR020C	__________	-1.17	210900	180430	unknown	unknown
YOR099W	KTR1______	+1.21	961387	1167929	protein glycosylation	mannosyltransferase
YPL075W	GCR1______	+1.12	111899	125059	glycolysis	transcriptional activator
YPR166C	MRP2______	-2.14	301151	140817	protein synthesis	ribosomal protein, mitochondrial S14
YBR147W	__________	+1.00	52076	52263	unknown	unknown
YCR085W	__________	-1.10	55649	50523	unknown	unknown
YDR019C	GCV1______	+1.01	102803	103952	amino acid metabolism	glycine decarboxylase T subunit
YDR384C	__________	-1.22	174249	142425	unknown	unknown; similar to Y. lipolytica Gpr1p
YER081W	SER3______	-1.09	695993	641179	serine biosynthesis	3-phosphoglycerate dehydrogenase
YGL077C	HNM1______	-1.24	532618	430590	transport	choline permease
YGR184C	UBR1______	-1.03	55915	54474	protein degradation, ubiquitin-mediated	ubiquitin-protein ligase
YHR201C	PPX1______	+1.07	677909	723423	unknown	vacuolar exopolyphosphatase
YJL078C	PRY3______	+1.42	55583	79151	unknown	unknown; similar to plant PR-pathogen related proteins
YKL075C	__________	+1.37	153890	210460	unknown	unknown
YLR010C	__________	+1.36	84889	115833	unknown	unknown
YLR382C	NAM2______	+1.22	156435	191624	protein synthesis	tRNA synthetase, mitochondrial, leucyl
YNL169C	PSD1______	-1.12	138278	123113	phospholipid metabolism	phosphatidylserine decarboxylase
YOL075C	__________	+1.55	191595	297287	unknown	putative ATP-dependent transporter
YOR287C	__________	-1.21	352934	290533	unknown	unknown; similar to PITSLRE protein kinase isoforms
YPL263C	KEL3______	+1.13	172778	194782	unknown	unknown; similar to Kel1p and Kel2p
YBL087C	RPL23A____	-1.93	10241626	5306354	protein synthesis	ribosomal protein L23A
YDL089W	__________	-1.35	123522	91540	unknown	unknown
YDR212W	TCP1______	-1.30	1042327	799604	protein folding	cytoplasmic chaperonin complex
YFR012W	__________	+1.10	82074	90235	unknown	unknown
YGR017W	__________	+1.38	70600	97217	unknown	unknown; similar to Nmd2p
YHR030C	SLT2______	+3.42	1337354	4571188	signaling, PKC1 pathway	MAP kinase (mitogen-activated protein kinase)
YIL177C	__________	+2.09	1667623	3480652	unknown	unknown; similar to subtelomerically-encoded proteins
YJR056C	__________	+1.51	198941	300681	unknown	unknown
YKR053C	YSR3______	+1.69	170987	288286	sphingolipid metabolism	dihydrosphingosine-1-phosphate phosphatase
YLR210W	CLB4______	+1.11	123895	137846	cell cycle	G2/M cyclin
YML080W	__________	-1.30	460882	353487	unknown	unknown; similar to Azospirillum brasilense nifR3
YMR310C	__________	-1.22	575536	473099	unknown	unknown
YNR032W	PPG1______	+2.06	191416	394613	glycogen metabolism	protein phosphatase
YOR111W	__________	+1.31	118320	154922	unknown	unknown
YPL087W	YDC1______	+1.68	358770	601126	sphingolipid metabolism	dihyroceramidase
YPR178W	PRP4______	+1.51	217930	328377	mRNA splicing	U4/U6 snRNP protein
YBR159W	__________	+1.01	499843	504455	unknown	unknown; similar to human estradiol
YCR096C	HMRA2_____	+1.24	389449	481563	unknown	mating type a specific
YDR031W	__________	-1.26	126207	100166	unknown	unknown
YDR396W	__________	-1.27	441028	346115	unknown	unknown
YER092W	__________	+1.35	230343	310496	unknown	unknown
YGL089C	MF(ALPHA)2	-1.81	2223565	1230991	mating	alpha factor
YGR196C	__________	+1.32	194011	256420	unknown	unknown
YHR213W	__________	+2.23	135519	301759	unknown	unknown; similar to the N-terminus of Flo1p
YJL090C	DPB11_____	-1.20	166229	138978	DNA replication	DNA polymerase II complex
YKL087C	CYT2______	+1.23	267668	328579	cytochrome c1 biosynthesis	cytochrome c1 heme lyase
YLR022C	__________	-1.34	552876	412740	unknown	unknown
YLR394W	CST9______	+1.11	156557	174504	meiosis, synapsis	unknown
YMR128W	ECM16_____	+1.34	583479	781576	cell wall biogenesis	unknown
YNL181W	__________	+1.49	256261	381251	unknown	unknown
YOL087C	__________	+2.77	165760	458541	unknown	unknown
YPL275W	__________	+1.32	61559	81215	unknown	unknown; similar to formate dehydrogenases
YAL007C	ERP2______	-1.28	431522	338093	membrane trafficking; secretion (putative)	unknown
YBR171W	SEC66_____	-1.36	309462	227749	secretion	ER protein translocation subcomplex subunit
YCRX01W	__________	-1.17	66342	56733
YDR042C	__________	+1.05	79306	83193	unknown	unknown
YDR409W	__________	+1.36	736778	1001352	unknown	unknown; similar to Nfi1p
YER104W	RTT105____	-1.28	120572	93933	transposition (putative)	unknown
YGL102C	__________	-2.60	14170355	5441944	unknown	unknown
YGR209C	TRX2______	-1.74	2053130	1180575	DNA replication	thioredoxin II
YIL006W	__________	-1.33	129425	97315	unknown	unknown; similar to Flx1p, Yel006p, and other members of
YJL103C	__________	+2.27	86205	195405	unknown	unknown; similar to transcription factors, has Zn[2]-Cys[6]
YKL099C	__________	-2.74	586135	214249	unknown	unknown; similar to human kinesin heavy chain
YLR035C	MLH2______	+1.27	91267	115851	DNA repair	MutL homolog; mismatch repair; non-Mendelian segregation
YLR407W	__________	+1.68	168603	282878	unknown	unknown
YMR140W	__________	+2.28	82117	187273	unknown	unknown
YNL194C	__________	+1.19	71763	85547	unknown	unknown; similar to Sur7p
YOL100W	PKH2______	+2.97	225854	670835	unknown	protein kinase (ser/thr)
YOR310C	NOP58_____	-1.08	2787411	2583323	ribosome biogenesis	nucleolar protein
YPR005C	HAL1______	+2.49	102616	255605	salt tolerance	unknown
YBL100C	__________	+2.11	137290	289873	unknown	unknown
YCL005W	__________	-1.25	209311	167507	unknown	unknown
YDL102W	CDC2______	-1.24	153662	124037	DNA replication	DNA polymerase delta catalytic 125 KD subunit
YDR225W	HTA1______	-1.57	4665150	2965895	chromatin structure	histone H2A
YEL006W	__________	-1.50	256678	171515	unknown	unknown; similar to Aac1p, Pet9p, Aac3p, Yil006p and other
YFR025C	HIS2______	+1.04	165266	172051	histidine biosynthesis	histidinol phosphatase
YGR028W	MSP1______	+1.18	141833	167132	mitochondrial protein targeting	AAA-ATPase
YHR042W	NCP1______	-1.15	146385	127824	microsomal electron transfer	NADP-cytochrome P450 reductase
YIR013C	GAT4______	-1.02	48212	47042	transcription (putative)	DNA binding protein, GATA family
YJR069C	HAM1______	-1.35	419394	311286	6-N-hydroxylaminopurine resistance	unknown
YKR066C	CCP1______	-1.71	506361	296197	oxidative stress response	cytochrome-c peroxidase
YLR223C	IFH1______	+1.54	362662	556949	rRNA processing	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YML093W	__________	-1.04	365177	351605	unknown	unknown
YNL006W	LST8______	+1.65	243887	402490	secretion	unknown; post-Golgi
YNR045W	PET494____	+1.26	152857	193040	protein synthesis	translation activator of COX3
YOR124C	UBP2______	+1.31	550785	723091	protein degradation, ubiquitin-mediated	ubiquitin-specific protease
YPL100W	__________	+1.55	126752	196131	unknown	unknown; similar to Yfr021p
YPR191W	QCR2______	+3.07	700800	2148095	oxidative phosphorylation	ubiquinol--cytochrome-c reductase 40 kD subunit
YAL019W	FUN30_____	+1.50	168935	253568	unknown	unknown; similar to SNF2 transcriptional regulator
YBR183W	YPC1______	+1.46	119334	174720	sphingolipid metabolism	alkaline ceramidase
YCRX13W	__________	+1.36	210859	287712
YDR054C	CDC34_____	+1.40	289964	404986	protein degradation, ubiquitin-mediated	E2 ub.-conjugating enzyme
YDR421W	__________	+1.82	129750	235924	unknown	unknown
YER116C	__________	+1.59	105094	167275	unknown	unknown
YGL114W	__________	+1.43	225221	322769	unknown	unknown; major facilitator superfamily
YGR221C	__________	+1.39	77453	108037	unknown	unknown
YIL017C	VID28_____	+1.35	74372	100338	vacuolar protein targeting (putative)	unknown
YJL115W	ASF1______	+1.30	265160	345820	transcription	anti-silencing protein
YKL111C	__________	-1.15	128632	111640	unknown	unknown
YLR045C	STU2______	+1.29	96200	123959	cytoskeleton	spindle pole body component
YLR417W	VPS36_____	+1.17	142350	165975	vacuolar protein targeting	unknown?
YMR152W	YIM1______	-1.20	243068	203125	protein processing	mitochondrial inner membrane protease
YNL206C	RTT106____	+1.15	150447	173333	transposition	unknown; similar to SSRP proteins (DNA structure-specific
YOL110W	SHR5______	+1.38	150811	207653	protein processing	localization and palmitoylation of Ras proteins
YOR322C	__________	+1.54	139764	215727	unknown	unknown
YPR017C	DSS4______	-1.17	186095	158833	secretion	GDP/GTP exchange factor for Sec4p
YBL110C	__________	+1.61	193533	310639
YCL018W	LEU2______	-1.64	667548	408265	leucine biosynthesis	beta-isopropyl-malate dehydrogenase
YDL114W	__________	-1.26	79379	63075	unknown	unknown
YEL017W	__________	-1.16	187603	161909	unknown	unknown
YFR035C	__________	-1.06	202763	190936	unknown	unknown
YHR053C	CUP1-1____	-1.64	3542466	2166111	Cu2+ ion homeostasis	metallothionein
YIR023W	DAL81_____	-1.23	65680	53393	transcription	activator of allantoin and urea catabolic genes
YJR082C	__________	-1.14	207794	181523	unknown	unknown
YKR078W	__________	-1.18	99173	84034	unknown	unknown; similar to Uso1p
YLR233C	EST1______	+1.03	51804	53275	telomere length regulation	putative end-binding protein
YML102W	CAC2______	+1.42	216714	307452	chromatin structure	chromatin assembly factor I subunit
YNL018C	__________	+1.16	55934	64703	unknown	unknown; similar to Drosophila melanogaster
YNR057C	BIO4______	+1.62	144607	234755	biotin biosynthesis	dethiobiotin synthetase
YOR136W	IDH2______	+1.32	815925	1074657	TCA cycle	isocitrate dehydrogenase
YPL112C	__________	+1.01	275477	278504	unknown	unknown
YPR203W	__________	+1.69	170760	288824	unknown	unknown; similar to other subtelomerically-encoded proteins
YAL030W	SNC1______	+1.07	200530	214911	secretion	Golgi v-SNARE
YBR195C	MSI1______	-1.16	139023	120108	chromatin structure	chromatin assembly factor I subunit
YDR066C	__________	-1.24	123035	99492	unknown	unknown; similar to Yer139p
YDR433W	__________	-1.37	62823	45839	unknown	unknown
YER127W	LCP5______	-1.58	478974	303051	rRNA processing, putative	unknown
YGL126W	SCS3______	-1.31	49298	37494	phospholipid metabolism	inositol phospholipid biosynthesis
YGR233C	PHO81_____	-1.27	148923	117695	cell cycle	Pho85p kinase inhibitor
YIL029C	__________	-1.03	70258	68332	unknown	unknown
YJL127C	SPT10_____	+1.65	77315	127710	transcription	transcriptional regulator
YKL123W	__________	+1.05	55535	58542	unknown	unknown
YLR057W	__________	+1.34	126971	170728	unknown	unknown
YLR427W	__________	+1.65	125242	206341	unknown	unknown
YMR162C	__________	+1.01	49772	50060	unknown	unknown; similar to members of the Drs2p family of P-type
YNL218W	__________	+1.10	58540	64625	unknown	unknown; similar to E. coli DNA polymerase III gamma and tau
YOL122C	SMF1______	+2.06	185268	381568	transport	high affinity manganese transporter
YOR334W	MRS2______	+1.39	120547	167264	mRNA splicing, mitochondrial	unknown
YPR029C	APL4______	+1.25	711713	892020	secretion	AP complex subunit
YBR009C	HHF1______	-1.39	4454875	3215631	chromatin structure	histone H4
YCL030C	HIS4______	-1.60	834695	521370	histidine biosynthesis	histidinol dehydrogenase
YDL126C	CDC48_____	+1.95	684673	1333174	ubiquitin mediated degredation	microsomal AAA ATPase family
YDR249C	__________	-1.04	84234	80781	unknown	unknown; similar to cytochromes
YEL029C	__________	+1.27	141239	179558	unknown	unknown; similar to putative Salmonella phosphotransferase
YFR046C	__________	+1.11	157981	175516	unknown	unknown
YGR047C	TFC4______	+1.29	76206	98264	transcription	TFIIIC 131 kD subunit
YIR034C	LYS1______	+1.46	297065	432473	lysine biosynthesis	saccharopine dehydrogenase
YJR094C	IME1______	+1.35	61491	83032	meiosis	transcription factor
YKR090W	__________	+1.73	91765	158652	unknown	unknown
YLR245C	CDD1______	+1.85	44216	81869	pyrimidine metabolism	cytidine deaminase
YML114C	TAF65_____	+1.30	249763	324115	transcription	TFIID subunit
YNL030W	HHF2______	-1.42	5787088	4073271	chromatin structure	histone H4
YNR069C	__________	-2.10	203470	97119	unknown	unknown
YOR146W	__________	+1.15	505565	578912	unknown	unknown
YPL124W	NIP29_____	-1.20	145547	121159	nuclear protein targeting	spindle pole body associated protein
YAL040C	CLN3______	+1.90	427901	812497	cell cycle	G1/S cyclin
YBR207W	FTH1______	+2.04	119129	243154	unknown	unknown; similar to Ftr1p
YDR078C	__________	+1.03	106405	110026	unknown	unknown
YDR445C	__________	-1.02	138171	135045	unknown	unknown
YGL138C	__________	-1.21	39730	32956	unknown	unknown
YGR245C	SDA1______	-1.56	783114	500822	cytoskeleton (putative)	unknown
YIL041W	__________	+1.08	1414457	1528348	unknown	unknown
YJL139C	YUR1______	-1.01	124254	122629	protein glycosylation	mannosyltransferase
YKL135C	APL2______	+1.54	97787	150963	secretion	AP-1 complex subunit
YLR069C	MEF1______	+1.26	227511	287789	protein synthesis	translation elongation factor G, mitochondrial
YLR439W	MRPL4_____	-1.28	391811	306515	protein synthesis	ribosomal protein, mitochondrial L4
YMR173W	DDR48_____	+1.37	2246060	3067105	unknown	induced by DNA damage, heat shock, or osmotic stress
YNL230C	ELA1______	+1.45	139200	201713	transcription (putative)	elongin A homolog
YOL134C	__________	-1.01	216966	214898	unknown	unknown
YOR344C	TYE7______	-1.12	921889	826111	glycolysis	basic h-l-h transcription factor
YPR041W	TIF5______	-1.20	1559250	1295999	protein synthesis	translation initiation factor eIF5
YBR019C	GAL10_____	+1.09	61459	66970	galactose metabolism	UDP-glucose 4-epimerase
YCL042W	__________	+1.00	59858	59875	unknown	unknown
YDL136W	RPL35B____	-1.64	1588915	968869	protein synthesis	ribosomal protein L35B
YDR261C	EXG2______	+2.36	275545	649868	cell wall biogenesis	exo-beta-1,3-glucanase
YEL041W	__________	+1.74	57193	99381	unknown	unknown; similar to Fre2p
YGR059W	SPR3______	+1.98	50014	99114	sporulation	septin
YHR074W	__________	+1.65	346097	572650	unknown	unknown; similar to Rhodobacter protein adgA and Bacillus subtilis NH3-dependent NAD synthetase (spore outgrowth factor)
YJR105W	__________	+1.36	1627125	2211007	unknown	unknown; similar to ribokinase
YKR102W	FLO10_____	+1.42	85938	122001	unknown	unknown; similar to flocculation protein Flo1p
YML125C	__________	-1.13	1017290	898116	unknown	unknown; similar to NADH-cytochrome b5 reductase
YNL040W	__________	+1.03	238283	245128	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YOR158W	PET123____	-1.23	422751	343926	protein synthesis	ribosomal protein, mitochondrial small subunit
YPL136W	__________	+1.23	70754	86935	unknown	unknown
YAL053W	__________	+4.01	304553	1222247	unknown	unknown
YBR219C	__________	-1.00	166368	166049	unknown	unknown
YDR090C	__________	+1.53	148066	227016	unknown	unknown; similar to Yro2p
YDR457W	TOM1______	+2.92	50278	147010	cell cycle, G2/M	unknown
YER148W	SPT15_____	-1.44	1237226	858733	transcription	TFIID and TFIIIB subunit
YGL150C	INO80_____	-1.80	151854	84428	unknown	unknown; similar to the Snf2p family of DNA-dependent ATPases
YGR257C	__________	+1.30	292761	379315	unknown	unknown; similar to members of the mitochondrial carrier
YIL053W	RHR2______	-1.85	6763106	3646619	glycerol metabolism	DL-glycerol-3-phosphatase
YJL151C	__________	+2.16	694184	1499641	unknown	unknown
YKL147C	__________	-1.18	87354	74027	unknown	unknown
YLR081W	GAL2______	-1.05	104075	98946	transport	glucose and galactose permease
YLR451W	LEU3______	+1.03	107297	110548	leucine biosynthesis	transcription factor
YMR184W	__________	+1.96	196692	385189	unknown	unknown
YNL242W	SPO72_____	-1.09	67039	61548	sporulation	unknown
YOL146W	__________	+1.03	205099	210767	unknown	unknown
YOR356W	__________	+1.01	56713	57533	unknown	unknown; similar to human electron transfer flavoprotein-ubiquinone oxidoreductase
YPR053C	__________	+1.15	455721	524231	unknown	unknown
YBR031W	RPL4A_____	+1.02	10198137	10433753	protein synthesis	ribosomal protein L4A
YCL054W	SPB1______	-1.43	279847	195406	ribosome biogenesis	rRna methyltransferase (putative)
YDL148C	__________	+1.12	230933	258192	unknown	unknown
YDR269C	__________	-1.03	66943	65031	unknown	unknown
YEL053C	MAK10_____	+1.04	199159	208071	dsRNA virus propagation	unknown
YGR071C	__________	+1.17	76901	90006	unknown	unknown
YHR085W	__________	+1.19	50590	60355	unknown	unknown
YJR117W	STE24_____	+1.35	431976	581195	protein processing	zinc metalloprotease; a-factor precursor processing
YLR265C	__________	+1.78	90188	160707	unknown	unknown
YMR004W	MVP1______	+1.63	216454	352903	vacuolar protein targeting	peripheral Golgi membrane protein
YNL052W	COX5A_____	+1.60	1239453	1985995	oxidative phosphorylation	cytochrome-c oxidase subunit Va
YOR170W	__________	-1.13	304179	268183	unknown	unknown
YPL148C	PPT2______	+1.60	94580	151186	lipid transport	phosphopantetheine
YAL064W	__________	+1.26	39606	49729	unknown	unknown
YBR231C	AOR1______	+1.52	104569	158423	osmotic stress response (putative)	unknown
YDR100W	__________	+1.23	124694	153261	unknown	unknown
YDR469W	__________	+1.02	235224	239968	unknown	unknown; similar to C. elegans dpy-30 gene product,
YER159C	BUR6______	+1.87	451147	845692	transcription	general pol II repressor
YGL162W	SUT1______	-1.08	109230	100682	transport	hypoxic gene family (sterol uptake)
YGR269W	__________	+1.65	45924	75775	unknown	unknown
YIL065C	MDV2______	+1.35	168825	228362	unknown	unknown
YJL163C	__________	+2.00	69800	139588	unknown	unknown; similar to bovine prefoldin subunit 1
YKL159C	RCN1______	+3.22	105825	340376	signaling	unknown; calcineurin regulator
YLR093C	NYV1______	+1.66	342143	568369	vacuolar protein targeting	vacuolar v-SNARE
YLR463C	__________	+1.72	207855	358162	unknown	unknown; similar to other subtelomerically-coded proteins
YMR195W	ICY1______	-2.69	313741	116628	cytoskeleton (putative)	unknown
YNL254C	__________	+2.15	109528	235539	unknown	unknown
YOL158C	ENB1______	+2.35	109366	256785	transport	enterobactin transporter
YOR368W	RAD17_____	+1.25	177614	221859	cell cycle, checkpoint	3'->5' exonuclease (putative)
YPR065W	ROX1______	+1.12	50346	56140	transcription, oxygen-dependent	transcriptional repressor
YBR043C	__________	+1.01	81685	82279	unknown	major facilitator superfamily
YCL066W	HMLALPHA1_	-1.21	268498	222739	transcription	silenced copy at HML; see YCR040W
YDL160C	DHH1______	+1.11	122746	136280	transcription	RNA helicase
YDR281C	PHM6______	-2.73	98856	36248	phosphate metabolism (putative)	unknown
YEL064C	__________	-1.06	77380	72769	unknown	unknown; similar to members of the major facilitator
YGR083C	GCD2______	+1.13	572322	644050	protein synthesis	translation initiation factor eIF2B subunit
YHR097C	__________	+5.18	240555	1246349	unknown	unknown
YJR129C	__________	+1.64	200364	327972	unknown	unknown
YLR277C	YSH1______	+1.30	155333	201636	mRNA 3'-end processing	cleavage/polyadenylation factor CF II component
YMR016C	SOK2______	+1.76	206557	364311	unknown	unknown; similar to several transcription factors
YNL062C	GCD10_____	+1.00	346300	347991	protein synthesis	translation initiation factor eIF3 RNA-binding subunit
YOR182C	RPS30B____	-1.52	3762531	2469929	protein synthesis	ribosomal protein S30B
YPL160W	CDC60_____	-1.18	85858	72463	protein synthesis	tRNA synthetase, leucyl
YAR014C	__________	+1.47	216605	318410	unknown	unknown
YBR243C	ALG7______	+1.14	161585	184627	protein glycosylation	UDP-N-acetyl-glucosamine-1-P transferase (GPT)
YDR112W	__________	-1.07	48288	45009	unknown	unknown
YDR481C	PHO8______	+1.09	296950	324846	phosphate metabolism	vacuolar alkaline phosphatase
YER168C	CCA1______	+1.39	223199	309598	tRNA processing	tRNA nucleotidyltransferase
YGL174W	__________	+1.11	142100	157406	unknown	unknown
YGR281W	YOR1______	+1.59	274580	435254	transport	ATP-binding cassette (ABC) family
YIL074C	SER33_____	-1.18	1086016	922306	serine biosynthesis	3-phosphoglycerate dehydrogenase
YJL175W	__________	+1.52	93736	142104	unknown	unknown
YKL171W	__________	+1.99	69862	139252	unknown	putative protein kinase
YLR105C	SEN2______	+1.14	193420	221043	tRNA splicing	splicing endonuclease subunit
YMR207C	HFA1______	+1.52	217306	331079	unknown	unknown; similar to acetyl-coenzyme A carboxylase
YNL266W	__________	+1.08	181563	196110	unknown	unknown; similar to NADH dehydrogenases
YOR004W	__________	-1.61	898325	556497	unknown	unknown
YOR380W	__________	+1.66	111965	185952	unknown	unknown; similar to transcription factors, has Zn[2]-Cys[6]
YPR077C	__________	+1.54	71617	110516	unknown	unknown
YBR055C	PRP6______	+1.20	159471	190597	mRNA splicing	U4/U6 snRNP protein
YCLX05C	__________	+1.24	116132	143535
YDL172C	__________	+2.05	278913	572342	unknown	unknown
YDR293C	SSD1______	+2.01	127662	256007	drug resistance	putative protein phosphatase
YGR095C	RRP46_____	-1.51	414440	273650	rRNA processing	3'->5' exoribonuclease
YHR109W	CTM1______	+1.31	186839	244615	proteim modification	cytochrome c trimethylase
YJR141W	__________	+1.09	206293	224245	unknown	unknown
YLR288C	MEC3______	+1.20	127229	152487	DNA repair; DNA damage checkpoint	activates exonuclease
YMR028W	TAP42_____	+1.27	340106	431051	signaling	associated with protein phosphatases
YNL074C	MLF3______	+1.86	307531	570731	unknown	unknown
YPL172C	COX10_____	+1.12	126971	142296	respiration	cytochrome-c oxidase assembly
YAR035W	YAT1______	+1.34	45662	61407	fatty acid transport	carnitine O-acetyltransferase
YBR255W	__________	+1.11	89031	98963	unknown	unknown
YDR124W	__________	+1.21	98391	119169	unknown	unknown
YDR493W	__________	+1.18	102641	121221	unknown	unknown
YER179W	DMC1______	+1.30	90160	117413	meiosis, chromsome pairing	unknown
YGL186C	__________	-1.13	202206	179609	unknown	unknown; similar to Fcy21p, Fcy2p, Fcy22p
YGR293C	__________	+1.56	70058	109600	unknown	unknown
YIL085C	KTR7______	-1.03	494754	480763	protein glycosylation	putative mannosyltransferase
YJL187C	SWE1______	+1.70	172548	293971	cell cycle	negative regulator of Cdc28p
YKL183W	__________	+1.74	89613	156072	unknown	unknown
YLR117C	CLF1______	+1.35	107975	145493	mRNA splicing; cell cycle (putative)	unknown; synthetic lethal with cdc40

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YMR219W	ESC1______	+1.80	367722	662990	silencing	unknown
YNL278W	__________	+2.02	132862	268070	unknown	unknown
YOR016C	ERP4______	+1.08	65569	70663	membrane trafficking; secretion (putative)	unknown
YOR392W	__________	+1.37	45978	62883	unknown	unknown
YPR089W	__________	+1.97	59934	117865	unknown	unknown
YBR067C	TIP1______	+1.52	529731	804428	stress response (putative)	cell wall mannoprotein
YCR005C	CIT2______	+2.52	240651	606966	glyoxylate cycle	peroxisomal citrate synthase
YDL184C	RPL41A____	-1.71	4006728	2345382	protein synthesis	ribosomal protein L41A
YDR305C	HNT2______	-1.53	258583	169327	unknown	histidine triad family
YER008C	SEC3______	+1.15	697363	803944	secretion	exocyst complex subunit
YGR107W	__________	-1.02	203196	199343	unknown	unknown
YHR121W	__________	-1.42	579454	409271	unknown	unknown
YJR153W	PGU1______	+1.34	123905	165956	unknown	endo-polygalacturonase
YLR300W	EXG1______	+1.53	4084570	6245336	cell wall biogenesis	exo-beta-1,3-glucanase
YMR039C	SUB1______	+1.04	369253	384845	transcription	transcriptional coactivator
YNL086W	__________	+1.46	107991	158010	unknown	unknown
YOR204W	DED1______	+1.97	1049720	2071354	RNA processing	ATP-dependent RNA helicase
YBL005W	TY1B______	-2.18	97173	44614	unknown	unknown
YBR267W	__________	+1.29	342636	441748	unknown	unknown
YDL006W	PTC1______	+1.15	185634	212745	tRNA splicing	protein phosphatase
YDR136C	__________	-1.58	63756	40283	unknown	unknown
YDR505C	PSP1______	+1.40	76852	107396	unknown	unknown; overexpression suppresses mutation in pol3
YFL004W	PHM1______	-1.44	578796	403142	phosphate metabolism (putative)	polyphosphate synthetase (putative)
YGL198W	__________	+1.01	160863	162721	unknown	unknown; similar to NADH-ubiquinone oxidoreductase chain 2
YHL005C	__________	-1.12	51674	46041	unknown	unknown
YIL097W	__________	+1.05	90011	94896	unknown	unknown
YJL199C	__________	+1.14	55715	63399	unknown	unknown
YKL195W	__________	-1.42	36105	25465	unknown	unknown
YLR129W	DIP2______	-1.04	289975	277984	unknown	interacts with Dom3p
YML006C	GIS4______	-1.13	246065	217062	unknown	unknown
YMR231W	PEP5______	+1.28	130216	166594	vacuole biogenesis	unknown; vacuolar peripheral membrane protein
YNL288W	__________	+1.03	303422	313031	unknown	unknown
YOR028C	CIN5______	-1.28	133530	104680	salt tolerance	basic leu zipper transcription factor
YPL006W	NCR1______	-1.04	57189	55094	sterol metabolism (putative)	unknown
YPR101W	SNT309____	+1.01	232085	235444	mRNA splicing	spliceosome-associated protein
YBR079C	RPG1______	+1.36	1000244	1357851	protein synthesis	translation initiation factor eIF3
YCR017C	__________	-1.73	100904	58443	unknown	unknown
YDL196W	__________	-1.27	58640	46192	unknown	unknown
YER019W	__________	-1.00	582553	579764	unknown	unknown; similar to mammalian neutral
YGL006W	PMC1______	+3.06	247122	757291	transport	vacuolar Ca(2+)-ATPase
YGR117C	__________	-1.06	171307	161769	unknown	unknown
YHR132C	ECM14_____	+1.13	344957	389395	cell wall biogenesis	unknown
YJL006C	CTK2______	+1.08	109903	118550	transcription	cyclin-like
YKL006C	SFT1______	-1.48	231060	155983	secretion	intra-Golgi v-SNARE
YLL006W	MMM1______	+1.01	104513	105883	mitochondrial biogenesis	(putative) component of actin binding protein complex
YLR312C	__________	-1.10	32631	29602	unknown	unknown
YNL098C	RAS2______	-1.21	531059	439572	signaling, Ras pathway	GTP-binding protein, ras homolog
YOL006C	TOP1______	+1.13	119453	135296	DNA replication	topoisomerase I
YOR216C	RUD3______	-1.03	315832	306820	secretion (putative)	unknown; suppresses uso1-1
YPL195W	APL5______	+1.01	94093	95077	vacuolar protein targeting	AP-3 complex subunit
YAR062W	__________	+2.18	106454	231744	unknown	unknown; similar to the N-terminus of Flo1p, identical to Yhr213p
YBL016W	FUS3______	+1.62	279560	453948	mating (cell cycle arrest)	protein kinase
YBR279W	PAF1______	+1.17	240093	281482	transcription	RNA polymerase II-associated protein
YDL018C	ERP3______	-1.40	147720	105510	membrane trafficking; secretion (putative)	unknown
YDR148C	KGD2______	+1.51	287413	433779	TCA cycle	2-oxoglutarate dehydrogenase
YDR517W	GRH1______	+1.26	234405	295477	unknown	unknown; homolog of mammalian Golgi protein GRASP65
YGL210W	YPT32_____	+1.49	243052	361287	secretion	ras-like GTPase
YHL014C	YLF2______	-1.08	135832	125211	unknown	unknown; similar to B. subtilis GTP-binding protein and human glycogen phosphorylases
YIL108W	__________	+4.17	185749	775356	unknown	unknown
YJL211C	__________	+1.76	62404	109981	unknown	unknown
YKL207W	__________	+1.28	347556	446391	unknown	unknown
YLR141W	RRN5______	+1.31	82113	107806	transcription	component of upstream activation factor complex (UAF)
YML015C	TAF40_____	+1.27	172069	218878	transcription	TFIID 40 kD subunit
YMR243C	ZRC1______	-1.85	1071384	578164	zinc and cadmium ion homeostasis	unknown
YNL300W	__________	+2.10	336908	706917	unknown	unknown; similar to Mid2p
YOR040W	GLO4______	+1.63	95851	156054	methylglyoxal resistance	glyoxalase II
YPL018W	CTF19_____	+1.65	96949	160097	mitosis, chromosome segregation	kinetochore protein
YPR113W	PIS1______	-1.34	946816	707239	phospholipid metabolism	phosphatidylinositol synthase
YBR090C	NHP6B_____	-1.02	490165	482080
YCR027C	RSG1______	-1.37	106101	77585	unknown	GTP-binding protein, ras family
YDL208W	NHP2______	-1.99	1663382	835249	unknown	unknown; similar to high mobility group proteins
YDR327W	__________	-1.19	406687	341200	unknown	unknown
YER030W	__________	-1.43	368937	258186	unknown	unknown
YGL018C	JAC1______	-1.17	147684	126687	protein folding	chaperonin; E. coli Hsc20 homolog
YGR129W	SYF2______	-1.24	133964	108402	cell cycle (putative)	unknown; synthetic lethal with cdc40
YHR143W	RPC10_____	-1.38	730005	528654	transcription	shared subunit of RNA polymerase I,II, and III
YJL018W	__________	+1.13	63810	71933	unknown	unknown
YKL017C	HCS1______	+1.18	107409	126937	DNA replication	DNA helicase A
YLL018C	DPS1______	-1.03	1984677	1926889	protein synthesis	tRNA synthetase, aspartyl
YLR323C	__________	-1.11	84439	76184	unknown	unknown
YNL110C	__________	-1.46	560876	384173	unknown	unknown
YOL018C	TLG2______	+1.30	164875	213579	endocytosis	trans-Golgi network t-SNARE
YOR228C	__________	+1.18	68704	81218	unknown	unknown
YPL207W	__________	-1.01	417567	411628	unknown	unknown
YBL028C	__________	-2.12	400217	188348	unknown	unknown
YBR291C	CTP1______	-1.36	251527	185294	transport	mitochondrial citrate transporter
YDL030W	PRP9______	-1.01	171565	170391	mRNA splicing	U2 snRNP activation
YDR160W	SSY1______	-1.03	109193	106041	transport	regulator of transporters
YDR529C	QCR7______	+1.42	642978	913117	respiration	cytochrome-c reductase subunit
YFL023W	__________	+1.14	99382	113551	unknown	unknown
YGL222C	EDC1______	-1.45	42553	29264	mRNA processing	unknown; genetic interactiosn with dcp1-2
YHL026C	__________	-1.44	163792	113976	unknown	unknown
YIL120W	QDR1______	+1.16	76044	88226	drug resistance (putative)	unknown; major facilitator superfamily
YJL223C	PAU1______	+2.29	177602	407334	unknown	unknown; similar to members of the Srp1p/Tip1p family
YKL219W	COS9______	+1.99	99730	198130	unknown	unknown; similar to subtelomerically-encoded proteins
YLR153C	ACS2______	+1.40	795653	1112340	acetyl-CoA biosynthesis	acetyl-coenzyme A synthetase
YML027W	YOX1______	+1.38	119459	165434	unknown	binds leu-tRNA gene
YMR255W	GFD1______	+1.02	148222	151229	RNA processing (putative)	unknown; affects DEAD box protein activity
YNL312W	RFA2______	+1.04	254918	265093	DNA replication	replication factor A 36 kD subunit
YOR052C	__________	+2.21	145749	321653	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YPL030W	__________	+1.14	289605	330438	unknown	unknown
YPR125W	__________	+1.12	986327	1108576	unknown	suppresses mrs2-1
YBR101C	__________	+1.23	567027	696096	unknown	unknown; similar to Ypt/Rab interacting protein
YCR038C	BUD5______	-1.12	95395	84946	bud site selection	GDP/GTP exchange factor for Rsr1p/Bud1p
YDL220C	CDC13_____	+1.25	53808	67160	cell cycle, G2/M	telomere binding protein
YDR339C	__________	-1.25	506024	403468	unknown	unknown
YER041W	__________	+1.47	87566	128619	unknown	unknown; similar to DNA repair protein Rad2p
YGL030W	RPL30_____	-1.08	2084807	1925501	protein synthesis	ribosomal protein L30
YGR141W	__________	+1.34	98143	131221	unknown	unknown
YHR154W	ESC4______	+1.09	83152	90228	silencing	unknown
YJL030W	MAD2______	-1.08	209044	193887	mitosis	unknown; spindle-assembly checkpoint
YKL029C	MAE1______	-1.29	454739	351691	pyruvate metabolism	mitochondrial malic enzyme
YLL030C	__________	-1.52	43161	28417	unknown	unknown; similar to Ca++-transporting ATPase
YLR335W	NUP2______	+1.09	328295	358477	nuclear protein targeting	nuclear pore protein
YMR072W	ABF2______	+1.19	416812	496461	mitochondrial genome maintenance	(putative) HMG transcription factors
YNL122C	__________	-1.18	206210	174887	unknown	unknown
YOL030W	__________	+1.42	1004074	1423520	unknown	unknown; similar to Gas1p
YOR240W	__________	+1.43	387661	553279
YPL219W	PCL8______	+1.42	104844	148945	cell cycle	cyclin (Pho85p)
YER190W	YRF1-2____	-1.14	61927	54152	unknown	Y' helicase (subtelomerically-encoded)
YBL040C	ERD2______	+1.00	175371	176223	ER protein retention	HDEL receptor
YDL042C	SIR2______	+1.33	49480	65944	silencing	reulator of silencing at HML, HMR, telomeres
YDR541C	__________	+1.31	106531	139111	unknown	unknown; similar to dihydroflavonol-4-reductases
YGL233W	SEC15_____	+1.12	188096	210506	secretion	exocyst complex subunit
YHL037C	__________	+1.00	46364	46434	unknown	unknown
YIL132C	__________	-1.18	56131	47514	unknown	unknown
YJR010C	SPC1______	-1.11	157365	141951	secretion	signal peptidase subunit
YKR006C	MRPL13____	-1.49	380915	256147	protein synthesis	ribosomal protein, mitochondrial L13
YLR163C	MAS1______	+1.05	250657	262684	protein processing	mitochondrial processing protease subunit
YML037C	__________	+1.16	58585	67866	unknown	unknown
YMR267W	PPA2______	-1.08	100732	93658	oxidative phosphorylation	inorganic pyrophosphatase, mitochondrial
YNL324W	__________	+1.25	50851	63624	unknown	unknown
YOR064C	YNG1______	+1.23	205782	253505	chromatin structure	histone acetyltransferase complex subunit
YPL042C	SSN3______	+1.36	123984	168780	transcription	RNA polymerase II mediator subunit
YPR137W	RRP9______	-1.26	552328	438685	rRNA processing	U3 snRNP protein
YBR112C	CYC8______	+1.25	62528	78034	transcription	general repressor
YCR050C	__________	+1.87	99134	185438	mitochondrial function (putative)	unknown
YDL232W	OST4______	+1.08	80121	86540	protein glycosylation	oligosaccharyltransferase complex assembly
YDR351W	SBE2______	+2.13	143764	306894	bud growth	unknown
YER051W	__________	+1.45	86957	126444	unknown	unknown
YGL042C	__________	-1.03	292605	283525	unknown	unknown; similar to rat Na+/Ca++ exchanger NCX2 PIR:A54139
YGR153W	__________	+2.33	106512	248385	unknown	unknown
YHR166C	CDC23_____	+1.21	129420	156480	mitosis	anaphase promoting complex subunit
YJL043W	__________	+1.16	49449	57590	unknown	unknown
YKL040C	NFU1______	-1.17	540628	463735	iron homeostasis	unknown; similar to Anabaena nitrogen fixing protein nifU
YLL042C	APG10_____	+1.50	62743	93954	autophagy	unknown; protein conjugating enzyme (putative)
YLR347C	KAP95_____	+1.80	196866	354131	nuclear protein targeting	beta-karyopherin
YMR083W	ADH3______	+1.07	3199920	3423061	glycolysis	alcohol dehydrogenase III, mitochondrial
YNL134C	__________	+1.35	4427716	5964661	unknown	unknown; similar to C. carbonum toxD gene
YOL042W	__________	+1.12	238385	265957	unknown	unknown; similar to Ccr4p
YOR252W	__________	-1.46	530362	362923	unknown	unknown
YPL231W	FAS2______	+1.12	83912	94016	fatty acid metabolism	fatty-acyl-CoA synthase, alpha subunit
YBL052C	SAS3______	+1.18	82688	97651	silencing	unknown
YDL054C	__________	+1.32	103506	136935	unknown	unknown
YDR181C	SAS4______	+1.26	150466	190281	silencing	unknown
YFL045C	SEC53_____	-1.28	2525293	1974031	protein glycosylation	phosphomannomutase
YGL245W	__________	+1.07	2001383	2142944	protein synthesis	tRNA synthetase, glutamyl
YHL048W	COS8______	+3.13	498922	1561131	unknown	unknown; similar to subtelomerically-encoded proteins
YIL144W	TID3______	+1.21	157840	190867	cytoskeleton	spindle pole body component
YJR022W	LSM8______	+1.10	98755	109110	mRNA splicing	snRNP protein (putative)
YKR018C	__________	+1.87	184242	343738	unknown	unknown
YLR175W	CBF5______	-1.26	2797335	2215615	mitosis	centromeric microtubule binding protein
YML047C	__________	-1.24	64821	52168	unknown	unknown
YMR279C	__________	+1.43	106516	152706	unknown	major facilitator superfamily
YNL336W	COS1______	+1.36	61082	83136	unknown	unknown; similar to subtelomerically-encoded proteins
YOR076C	__________	+1.20	188977	226316	unknown	unknown
YPL054W	LEE1______	+2.23	74491	166009	unknown	unknown
YPR147C	__________	-1.02	60979	59948	unknown	unknown
YBR124W	__________	+1.12	44525	50081	unknown	unknown
YCR062W	__________	+1.37	96248	131973	unknown	unknown
YDL244W	THI13_____	+2.47	123505	305356	unknown	unknown; similar to Thi5p, Thi11p, and Thi12p
YDR363W	ESC2______	+1.44	102849	147825	silencing	unknown
YER061C	CEM1______	+1.45	93994	136230	fatty acid metabolism	beta-keto-acyl-ACP synthase, mitochondrial
YGL054C	ERV14_____	-1.52	673847	444120	polarized growth (putative)	unknown; ER-derived vesicle protein
YHR178W	STB5______	+1.27	73469	93355	transcription	unknown; binds Sin3p
YJL055W	__________	+1.20	486656	585345	unknown	unknown
YKL052C	__________	+1.24	298903	371512	unknown	unknown
YLL054C	__________	+1.03	48046	49669	unknown	unknown; similar to transcription factors, has Zn[2]-Cys[6]
YLR359W	ADE13_____	-1.06	764178	721531	purine biosynthesis	adenylosuccinate lyase
YMR094W	CTF13_____	-1.02	111069	109186	mitosis	kinetochore protein complex subunit
YNL146W	__________	-1.07	62607	58739	unknown	unknown
YOL053C	__________	+4.54	99527	451382
YOR264W	__________	-1.18	293535	249431	unknown	unknown
YPL243W	SRP68_____	+1.10	771497	849112	secretion	signal recognition particle subunit
YBL064C	__________	+1.95	232759	454721	unknown	unknown; similar to Tsa1p
YDL066W	IDP1______	+1.19	176594	210155	TCA cycle	isocitrate dehydrogenase (NADP+)
YDR193W	__________	+1.23	51416	63250	unknown	unknown
YFL057C	__________	-1.04	47491	45838	unknown	putative aryl-alcohol reductase
YGL257C	MNT2______	+1.10	195406	214698	protein glycosylation	mannosyltransferase
YHR008C	SOD2______	+1.08	45949	49426	oxidative stress response	Manganese superoxide dismutase
YIL156W	UBP7______	+1.25	120317	150305	protein degradation, ubiquitin-mediated	ubiquitin-specific protease
YJR033C	RAV1______	+1.78	498184	886444	vacuolar acidification (putative)	unknown; regulates V-ATPase
YKR030W	__________	-1.20	289650	240978	unknown	unknown
YLR187W	__________	+1.61	63850	102765	unknown	unknown
YML057W	CMP2______	+2.69	283662	762299	signaling	calcineurin catalytic A subunit
YNR009W	__________	-1.43	200444	140564	unknown	unknown
YOR088W	__________	+1.28	269560	344245	unknown	unknown
YPL064C	__________	-1.02	257388	253474	unknown	unknown
YBR136W	MEC1______	-1.13	37378	32943	DNA repair and recombination	PI kinase homolog
YCR073C	SSK22_____	+1.53	98559	150701	signaling, high osmolarity pathway	MAPKKK (mitogen-activated protein kinase kinase kinase)

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YDR008C	__________	+1.24	114310	141940	unknown	unknown
YDR373W	FRQ1______	-1.15	317109	275753	unknown	unknown; similar to human BDR-1 protein and other calcium
YER070W	RNR1______	+1.42	506949	718063	DNA replication	ribonucleotide reductase
YGL066W	__________	-1.12	61531	54833	unknown	unknown; similar to Dictyostelium discoideum G-box-binding
YGR173W	__________	-1.06	681864	643339	unknown	unknown; similar to human GTP-binding protein PIR:A55014
YHR190W	ERG9______	+1.30	1017661	1326898	sterol metabloism	squalene synthetase
YJL067W	__________	+2.09	169233	353048	unknown	unknown
YKL064W	MNR2______	+1.88	122619	230785	manganese resistance	unknown
YLL066C	__________	+1.31	46821	61210	unknown	unknown; similar to other subtelomerically-encoded proteins
YLR371W	ROM2______	+1.61	489283	786169	signaling	GDP/GTP exchange factor for Rho1p
YMR106C	YKU80_____	+1.12	92064	102904	DNA repair	DNA binding; Ku80 homolog
YNL158W	__________	+1.36	175474	238440	unknown	unknown
YOL064C	MET22_____	+1.16	601759	700033	methionine biosynthesis	3'(2')5'-bisphosphate nucleotidase
YOR276W	CAF20_____	-1.41	1533389	1090277	protein synthesis	mRNA cap-binding protein (eIF4F) 20K subunit
YPL254W	HFI1______	-1.17	214730	184045	transcription	Ada/Gcn5 protein complex
YMR321C	__________	-1.84	1395972	757573	unknown	unknown
YBL076C	ILS1______	+1.46	327403	478730	protein synthesis	tRNA synthetase, isoleucyl
YDL078C	MDH3______	+1.38	366573	507388	TCA cycle	malate dehydrogenase
YDR205W	__________	+1.14	97970	111719	unknown	unknown; similar to Cot1p
YFR001W	LOC1______	-1.17	467811	400668	mRNA localization	dsRNA binding protein
YGR006W	PRP18_____	+1.30	107228	139004	mRNA splicing	U5 snRNP protein
YHR020W	__________	+1.08	1797005	1939587	unknown	unknown; similar to prolyl-tRNA synthetases, putative class
YIL167W	__________	+1.17	440293	515902	gluconeogenesis	serine dehydratase
YJR045C	SSC1______	+1.67	2695363	4494170	mitochondrial protein targeting	HSP70 family, chaperonin and import motor
YKR042W	UTH1______	+1.34	3910028	5232707	aging	unknown
YLR199C	__________	+1.37	301730	414753	unknown	unknown
YML069W	POB3______	+1.10	364566	399836	DNA replication (putative)	binds DNA polymerase delta
YMR301C	ATM1______	+1.14	316545	360822	transport	regulator of mit. iron transporter
YNR021W	__________	-1.49	937636	628322	unknown	unknown
YOR100C	CRC1______	+1.37	61228	84034	transport	mitochondrial carnitine carrier
YPL076W	GPI2______	+1.08	125648	136218	protein processing	N-acetylglucosaminylphosphatidylinositol synthesis
YPR167C	MET16_____	-1.02	271785	266310	sulfate assimilation	3'-phosphoadenylylsulfate reductase
YBR148W	YSW1______	+1.12	89829	100744	unknown	spore specific
YCR086W	__________	-1.19	172596	144629	unknown	unknown
YDR020C	__________	-1.14	90225	79329	unknown	unknown; similar to uridine kinases and phosphoribulokinases
YDR385W	EFT2______	+1.19	5165231	6138864	protein synthesis	translation elongation factor eEF2
YER082C	__________	+1.16	591770	688872	unknown	unknown
YGL078C	DBP3______	-1.30	1245198	957792	rRNA processing	RNA helicase
YGR185C	TYS1______	-1.41	1702683	1211742	protein synthesis	tRNA synthetase, tyrosyl
YHR202W	__________	+1.11	195495	217253	unknown	unknown
YJL079C	PRY1______	-1.18	446440	377784	unknown	unknown; similar to plant PR-pathogen related proteins
YKL076C	__________	+1.35	148398	200729	unknown	unknown
YLR011W	__________	+1.01	215914	216998	unknown	unknown; similar to E. coli 20.4 KD protein of unknown function
YLR383W	RHC18_____	+1.06	58824	62425	DNA repair, recombination	unknown
YMR118C	__________	+1.87	94816	176890	unknown	unknown; similar to Sdh3p
YNL170W	__________	-1.11	302432	272302	unknown	unknown
YOL076W	MDM20_____	+1.19	168626	200324	mitochondrial inheritance; actin assembly	transmembrane protein
YOR288C	MPD1______	+1.44	177552	256235	protein folding (putative)	related to protein disulfide isomerases
YPL264C	__________	+1.50	87775	131894	unknown	major facilitator superfamily
YBL088C	TEL1______	-1.15	41993	36474	telomere length regulation	putative phosphatidylinositol kinase
YDL090C	RAM1______	-1.22	111396	91192	protein processing	farnesyltransferase
YDR213W	UPC2______	+1.36	66701	90747	unknown	unknown; similar to transcription factors, has Zn[2]-Cys[6]
YFR013W	IOC3______	-1.26	193869	154157	unknown	unknown
YGR018C	__________	-1.13	292453	258355	unknown	unknown
YHR031C	RRM3______	+1.01	152619	153924	transposition; rDNA replication	DNA helicase
YIR001C	SGN1______	+1.60	291338	466990	unknown; growth on ethanol and glycerol	unknown
YJR057W	CDC8______	+1.25	193058	240612	DNA replication	thymidylate kinase
YKR054C	DYN1______	+1.28	44797	57255	cytoskeleton	dynein heavy chain
YLR211C	__________	+1.41	62569	88395	unknown	unknown
YML081W	__________	+1.39	472774	655380	unknown	unknown
YMR311C	GLC8______	+1.29	447989	575798	mitosis, chromosome segregation	unknown; regulates Glc7p
YNR033W	ABZ1______	+1.70	231595	393629	PABA biosynthesis	para-aminobenzoate synthase
YOR112W	__________	+1.30	149608	194663	unknown	unknown
YPL088W	__________	+3.13	392644	1230078	unknown	unknown; similar to Agrobacterium tumefaciens MocA protein
YPR179C	PLO1______	+1.29	100831	130352	unknown; ploidy-related	unknown; similar to C-terminal region of Nip80p
YBR160W	CDC28_____	+1.45	505914	733328	cell cycle	cyclin dependent protein kinase
YCR097W	HMRA1_____	-1.38	90722	65534
YDR032C	PST2______	+1.15	710618	815056	unknown	unknown; similar to Ycp4p and S. pombe OBR1 brefeldin A; secreted by regenerating protoplasts
YDR397C	NCB2______	+1.03	437298	448343	transcription	negative regulator of RNA polymerase II
YER093C	__________	+1.79	904555	1619959	unknown	unknown
YGL090W	LIF1______	-1.08	219181	202689	DNA replication (putative)	interacts with DNA ligase
YGR197C	SNG1______	+1.64	151366	247605	nitrosoguanidine resistance	unknown
YHR214W	__________	+2.11	273023	575887	unknown	unknown
YJL091C	__________	+1.76	165180	290639	unknown	unknown; similar to Can1p
YKL088W	__________	+1.55	175020	271646	unknown	unknown; similar to Sis2p
YLR023C	__________	+1.09	262423	286725	unknown	unknown
YLR395C	COX8______	+1.26	549112	693172	oxidative phosphorylation	cytochrome-c oxidase chain VIII
YMR129W	POM152____	+1.34	664800	890718	nuclear protein targeting	nuclear pore protein
YNL182C	__________	-1.15	550110	478836	unknown	unknown
YOL088C	MPD2______	+1.28	296217	379121	unknown	putative protein disulfide isomerase
YOR299W	BUD7______	+2.26	249194	562166	bud site selection, bipolar	unknown
YPL276W	__________	+1.80	75925	136957	unknown	unknown; similar to formate dehydrogenases
YAL008W	FUN14_____	+1.08	91510	98847	unknown	unknown
YBR172C	SMY2______	+1.40	311087	436473	unknown	kinesin related
YCRX02C	__________	+1.29	49744	64016
YDR043C	NRG1______	+1.94	136183	263822	unknown	unknown; suppresses snf mutation(s)
YDR410C	STE14_____	+1.07	160019	171850	mating	a-factor farnesyltransferase
YER105C	NUP157____	+1.04	610455	637527	nuclear protein targeting	nuclear pore protein
YGL103W	RPL28_____	-1.51	9871377	6529692	protein synthesis	ribosomal protein L28
YGR210C	__________	-2.14	818626	381909	unknown	unknown
YIL007C	__________	-1.21	1046042	867073	unknown	unknown
YJL104W	__________	-2.49	354109	142354	unknown	unknown
YKL100C	__________	+1.42	155051	220542	unknown	unknown
YLR408C	__________	+1.06	88569	93568	unknown	unknown
YMR141C	__________	+1.67	99977	166715	unknown	unknown
YNL195C	__________	+1.13	78518	88972	unknown	unknown
YOL101C	__________	-2.42	449573	185860	unknown	unknown
YOR311C	__________	+1.17	353638	413777	unknown	unknown
YPR006C	ICL2______	+1.49	135962	202089	unknown	isocitrate lyase, nonfunctional
YBL101C	ECM21_____	+1.05	57480	60515	cell wall biogenesis	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YCL006C	__________	-1.12	103947	92986
YDL103C	QRI1______	-1.15	324523	281942	UDP-N-acetylglucosamine biosynthesis	UDP-N-acetylglucosamine pyrophosphorylase
YDR226W	ADK1______	-1.37	2226110	1624065	metabolism	cytosolic adenylate kinase
YEL007W	__________	-3.00	212227	70644	unknown	unknown; similar to Yhr177p
YFR026C	__________	-1.53	137603	89921	unknown	unknown
YGR029W	ERV1______	-1.26	181869	144424	mitochondrial biogenesis	unknown; similar to human ALR protein
YHR043C	DOG2______	-1.02	348911	342226	2-deoxyglucose resistance	2-deoxyglucose-6-phosphate phosphatase
YIR014W	__________	+1.11	54445	60303	unknown	unknown
YJR070C	__________	-1.68	1798750	1073837	unknown	unknown
YKR067W	__________	+1.11	84682	93582	unknown	unknown; similar to Sct1p
YLR224W	__________	+1.17	232677	272548	unknown	unknown
YNL007C	SIS1______	+1.96	515276	1008598	translation	heat shock protein, homolog of E. coli DnaJ
YNR046W	__________	-1.25	794384	636969	unknown	unknown
YOR125C	CAT5______	-1.57	245690	156237	ubiquinone biosynthesis	unknown
YPL101W	__________	+1.10	320219	350882	unknown	unknown
YPR192W	AQY1______	+2.60	99805	259397	transport, water	aquaporin
YAL020C	ATS1______	-1.17	94655	81188	cytoskeleton (putative)	unknown; similar to human RCC1
YBR184W	__________	-1.32	196612	148445	unknown	unknown
YCRX14W	__________	+1.23	195246	240569
YDR055W	PST1______	+3.87	756403	2929701	unknown	unknown; secreted by regenerating protoplasts
YDR422C	SIP1______	+1.02	140418	143299	transcription	negative regulator of GAL genes
YER117W	RPL23B____	-1.81	7750010	4270787	protein synthesis	ribosomal protein L23B
YGL115W	SNF4______	-1.72	614217	357441	glucose derepression	component of Snf1 complex
YGR222W	PET54_____	-1.17	182660	155628	protein synthesis	translation activator of COX3
YIL018W	RPL2B_____	-1.28	12714012	9921888	protein synthesis	ribosomal protein L2B
YJL116C	NCA3______	-1.05	369225	350511	ATP synthesis	regulates expression of F0F1 ATPase subunits
YKL112W	ABF1______	+1.02	148561	151472	transcription	ARS-binding factor
YLR046C	__________	+1.34	127381	170561	unknown	unknown
YLR418C	CDC73_____	+1.01	315323	317116	transcription	RNA polymerase II accessory protein
YMR153W	NUP53_____	+1.14	320653	364765	nuclear protein targeting	nuclear pore protein
YNL207W	__________	-1.03	101721	99166	unknown	unknown
YOL111C	__________	-1.12	357261	319867	unknown	unknown; similar to human ubiquitin-like protein GDX
YOR323C	PRO2______	-1.29	1388353	1074028	proline biosynthesis	gamma-glutamyl phosphate reductase
YPR018W	RLF2______	+1.04	80795	84118	chromatin structure	chromatin assembly factor I subunit
YBL111C	__________	+1.59	377210	600489	unknown	unknown
YCL019W	__________	+1.03	15536659	15930193	unknown	unknown
YDL115C	__________	-2.32	441795	190049	unknown	unknown
YEL018W	__________	-1.04	217732	210048	unknown	unknown
YFR036W	CDC26_____	-2.49	363400	145919	cell cycle	anaphase-promoting complex subunit
YHR054C	__________	+1.40	529439	741744	unknown	unknown
YJR083C	__________	-1.01	132390	131307	unknown	unknown
YKR079C	__________	-1.25	885094	710477	unknown	unknown
YLR234W	TOP3______	+1.16	49585	57628	DNA replication	DNA topoisomerase III
YML103C	NUP188____	+1.27	356336	450900	nuclear protein targeting	nuclear pore protein
YNL019C	__________	+1.25	87718	110054	unknown	unknown
YNR058W	BIO3______	+1.98	112983	223744	biotin biosynthesis	DAPA aminotransferase
YOR137C	__________	+1.49	137516	204800	unknown	unknown
YPL113C	__________	+1.50	99959	149943	unknown	unknown; similar to E. coli 2-hydroxyacid dehydrogenase
YPR204W	__________	+1.94	3517792	6810293	unknown	unknown; similar to other subtelomerically-encoded proteins
YAL031C	FUN21_____	-1.40	178786	128045	unknown	unknown
YBR196C	PGI1______	-1.28	2538208	1985430	glycolysis	glucose-6-phosphate isomerase
YDR067C	__________	-1.21	196675	161913	unknown	unknown
YDR434W	__________	+1.36	205573	279828	unknown	unknown
YER128W	__________	-1.41	143053	101507	unknown	unknown
YGL127C	SOH1______	+1.30	261551	339690	unknown	unknown; similar to RNA polymerases
YGR234W	YHB1______	-1.30	11529871	8843534	oxidative stress response (putative)	flavohemoglobin
YIL030C	SSM4______	+1.82	509269	928992	mRNA decay	unknown
YJL128C	PBS2______	+1.25	363332	455168	signaling	two-component pathway
YKL124W	SSH4______	-1.24	384578	310750	unknown	suppresses shr3 mutation
YLR058C	SHM2______	-1.57	272153	173636	one-carbon interconversion	serine hydroxymethyltransferase
YLR428C	__________	+1.18	77520	91641	unknown	unknown
YMR163C	__________	+1.07	91993	98498	unknown	unknown
YNL219C	ALG9______	-1.20	198197	165460	protein glycosylation	mannosyltransferase
YOL123W	HRP1______	-1.01	674211	665406	mRNA processing	poly(A)+ RNA-binding protein, putative
YOR335C	ALA1______	+1.01	509573	517049	protein synthesis	tRNA synthetase, alanyl
YPR030W	CSR2______	-1.05	68113	64626	unknown	unknown; multicopy suppressor of chs5 spa2 double mutant
YBR010W	HHT1______	-1.02	6220589	6111345	chromatin structure	histone H3
YCL031C	RRP7______	-1.90	1131522	595159	rRNA processing	unknown
YDL127W	PCL2______	+1.07	211131	225658	cell cycle	G1/S cyclin
YDR250C	__________	-1.21	98186	80853	unknown	unknown
YEL030W	ECM10_____	+1.20	121437	145521	cell wall biogenesis	heat shock protein (HSP70)
YFR047C	__________	+1.34	312949	419899	unknown	unknown; similar to Rhodospirillum rubrum and S. typhimurium nicotinate-nucleotide pyrophosphorylase
YGR048W	UFD1______	+1.60	171518	274092	protein degradation, ubiquitin-mediated	unknown; ubiquitin fusion degradation
YHR064C	PDR13_____	+1.04	1209250	1255910	drug resistance	HSP70 homolog
YIR035C	__________	+1.16	378240	437464	unknown	unknown; similar to proteins of the human corticosteroid
YKR091W	SRL3______	+4.07	242844	987704	unknown	unknown; suppressor of Rad53 lethality
YLR246W	ERF2______	+1.38	114263	157759	signaling (putative)	unknown; synthetic lethal with Ras CaaX mutant
YML115C	VAN1______	+1.47	332835	490837	protein glycosylation and vanadate resistance	mannosyltransferase
YNL031C	HHT2______	+1.01	6380598	6437371	chromatin structure	histone H3
YNR070W	__________	-2.71	367420	135519	unknown	unknown; ATP-binding cassette (ABC) family
YOR147W	__________	+1.20	137932	165935	unknown	unknown
YPL125W	KAP120____	+1.11	58864	65514	nuclear protein targeting	karyopherin
YAL041W	CDC24_____	-1.14	619460	545380	cell polarity	GDP/GTP exchange factor for Cdc42p
YBR208C	DUR1,2____	+3.57	591668	2112153	nitrogen, amino acid, nucleotide metabolism	urea amidolyase
YDR079W	PET100____	+1.24	251925	313158	respiration	cytochrome-c oxidase assembly
YDR446W	ECM11_____	+5.56	144859	805962	cell wall biogenesis	unknown
YER138C	__________	+1.03	15733592	16133366	unknown	unknown
YGL139W	__________	-2.23	7038402	3160311	unknown	unknown
YGR246C	BRF1______	-2.86	2002963	700280	transcription	TFIIIB 70 kD subunit
YIL042C	__________	+2.61	101080	264291	unknown	unknown; similar to mitochondrial branched chain
YJL140W	RPB4______	+1.19	605226	719913	transcription	RNA polymerase II 32 kDa subunit
YKL136W	__________	-1.02	85138	83321	unknown	unknown
YLR070C	__________	+1.23	77586	95324	unknown	unknown; similar to sugar dehydrogenases
YLR440C	__________	+1.29	163151	211057	unknown	unknown
YNL231C	PDR16_____	-1.14	964533	848153	drug resistance	unknown
YOL135C	MED7______	+1.01	212383	214919	transcription	RNA polymerase II mediator subunit
YOR345C	__________	+1.15	64116	73893	unknown	unknown
YPR042C	PUF2______	-1.11	56435	50919	unknown	mRNA binding protein
YBR020W	GAL1______	+1.24	190195	234906	galactose metabolism	galactokinase
YCL043C	PDI1______	+2.26	1189233	2689782	protein folding	protein disulfide isomerase

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YDL137W	ARF2______	+1.53	1690569	2593631	secretion	ADP-ribosylation factor
YEL042W	GDA1______	+2.58	235562	606928	Golgi organization	Golgi membrane guanosine diphosphatase
YGR060W	ERG25_____	-1.52	421448	277701	sterol metabolism	C-4 sterol methyl oxidase
YHR075C	PPE1______	-1.22	227416	186252	protein synthesis	ribosomal protein, mitochondrial small subunit; carboxymethyl esterase
YJR106W	ECM27_____	+2.51	76378	191541	cell wall biogenesis	unknown
YKR103W	__________	+1.11	42566	47255	unknown	ATP-binding cassette (ABC) superfamily
YML126C	ERG13_____	+1.19	1944336	2311892	sterol metabolism	3-hydroxy-3-methylglutaryl coenzyme A synthase
YNL041C	__________	+1.51	96986	146897	unknown	unknown
YOR159C	SME1______	-1.17	265690	227243	mRNA splicing	U1, U2 snRNP protein
YPL137C	__________	+1.36	73083	99676	unknown	unknown; similar to Mhp1p
YAL054C	ACS1______	+1.09	59352	64450	acetyl-CoA biosynthesis	acetyl-CoA synthetase
YBR220C	__________	+1.21	143034	173324	unknown	unknown; similar to E. coli ampG protein
YDR091C	RLI1______	+1.12	652338	733228	unknown	unknown; similar to members of the ATP-binding cassette
YDR458C	__________	+1.35	168642	228330	unknown	unknown
YGL151W	NUT1______	+1.09	49114	53686	mating type switching	negative regulator of HO endonuclease
YGR258C	RAD2______	+1.64	78933	129663	DNA repair, nucleotide excision	single-stranded DNA endonuclease
YIL054W	__________	+1.22	42741	52088	unknown	unknown
YJL152W	__________	+1.79	459582	822491	unknown	unknown
YKL148C	SDH1______	+2.80	319192	895262	TCA cycle, oxidative phosphorylation	succinate dehydrogenase flavoprotein subunit
YLR082C	SRL2______	+1.69	44826	75579	unknown	unknown; suppressor of Rad53 lethality
YLR452C	SST2______	+1.15	425720	489978	mating	negative regulator of Gpa1
YMR185W	__________	+1.31	159365	209022	unknown	unknown
YNL243W	SLA2______	+1.81	657463	1191597	cytoskeleton	talin-like protein
YOL147C	PEX11_____	+1.17	409762	480430	peroxisome biogenesis	peripheral membrane protein
YOR357C	GRD19_____	+1.12	261133	293690	secretion	Golgi protein retention
YPR054W	SMK1______	+1.29	67953	87548	sporulation	MAP kinase
YBR032W	__________	+1.37	64532	88103	unknown	unknown
YCL055W	KAR4______	+1.07	145364	155281	karyogamy	transcription factor
YDL149W	APG9______	-1.06	91938	87073	autophagy	unknown; integral membrane protein
YDR270W	CCC2______	+1.47	71779	105512	oxidative phosphorylation	Cu(2+)-transporting ATPase
YEL054C	RPL12A____	-1.66	8690803	5231338	protein synthesis	ribosomal protein L12A
YGR072W	UPF3______	-1.52	272170	179305	mRNA decay, nonsense-mediated	unknown
YHR086W	NAM8______	+1.26	142085	178657	RNA splicing, mitochondrial	RNA binding protein
YJR118C	ILM1______	-1.15	333357	289229	mitochondrial genome maintenance (putative)	unknown
YLR266C	__________	-1.02	94699	92776	unknown	unknown; similar to transcription factors, has Zn[2]-Cys[6]
YMR005W	MPT1______	-1.00	382008	380620	protein synthesis	unknown
YNL053W	MSG5______	+2.55	213123	542925	signaling, pheromone pathway	dual-specificity protein phosphatase
YOR171C	LCB4______	+1.44	403428	582459	sphingolipid metabolism	long chain base kinase
YPL149W	APG5______	+1.87	247792	463403	autophagy	unknown
YAL065C	__________	+1.37	147246	201896	unknown	unknown; similar to Flo1p
YBR232C	__________	-1.02	59357	58056	unknown	unknown
YDR101C	__________	-1.65	1374099	835026	unknown	unknown
YDR470C	__________	-1.11	155921	141026	unknown	unknown; mitochondrial carrier (MCF) family
YGL163C	RAD54_____	+1.24	52539	65362	DNA repair	DNA-dependent ATPase
YGR270W	YTA7______	+1.39	66942	92943	protein degradation	26S proteasome subunit; ATPase
YIL066C	RNR3______	+1.79	133187	238111	DNA repair	repair-induced ribonucleotide reductase
YJL164C	SRA3______	+2.03	106540	215922	signaling	cAMP-dependent protein kinase subunit
YKL160W	__________	+1.20	669445	801120	unknown	unknown
YLR094C	GIS3______	+2.24	131273	293738	unknown	unknown
YLR464W	__________	+1.68	195803	329502	unknown	unknown; similar to other subtelomerically-coded proteins
YMR196W	__________	+1.50	664961	999962	unknown	unknown
YNL255C	GIS2______	-1.13	2364333	2084121	unknown	unknown; gig3 suppressor
YOL159C	__________	+2.03	237430	481929	unknown	unknown; similar to Ovis aries melatonin receptor
YOR369C	RPS12_____	-1.12	13870657	12381182	protein synthesis	ribosomal protein S12
YPR066W	UBA3______	-1.32	276415	209809	protein degradation, Rub1p-mediated	Rub1p activating protein
YBR044C	TCM62_____	+1.35	94689	127381	protein folding	chaperone, mitochondrial (putative)
YCL067C	HMLALPHA2_	+1.29	396321	512271	transcription	silenced copy at HML; see YCR039C
YDL161W	ENT1______	+1.26	336297	423872	endocytosis (putative)	unknown; epsin homolog
YDR282C	__________	+1.39	88165	122795	unknown	unknown
YEL065W	SIT1______	+2.05	63280	129467	transport	Ferrioxamine B permease
YGR084C	MRP13_____	-1.06	299282	283134	protein synthesis	ribosomal protein, mitochondrial small subunit
YHR098C	SFB3______	+1.45	488614	710131	unknown	unknown; binds Sed3p and Sec23p
YJR130C	STR2______	+1.84	255120	468946	methionine biosynthesis	O-succinylhomoserine (thiol)-lyase
YLR278C	__________	-1.05	49540	47283	unknown	unknown; similar to transcription factors, has Zn[2]-Cys]
YMR017W	SPO20_____	+1.41	65967	93176	sporulation	SNAP 25 homolog; prospore membrane formation
YNL063W	__________	+1.11	222351	246312	unknown	unknown; similar to Mycoplasma protophorphyrinogen oxidase
YOR183W	__________	+1.04	62329	64659	unknown	unknown
YPL161C	BEM4______	+1.06	56247	59529	bud emergence	interacts with Rho-type GTPases
YAR015W	ADE1______	-1.17	376594	321937	purine biosynthesis	phosphoribosylaminoimidazole-succinocarboxamide synthase
YBR244W	GPX2______	-1.04	197562	189735	mitochondrial morphology; glutathione metabolism (putative)	glutathione peroxidase (putative)
YDR113C	PDS1______	-1.11	138226	124243	cell cycle	anaphase inhibitor (putative)
YDR482C	__________	+1.62	162849	263383	unknown	unknown
YER169W	RPH1______	+1.62	93066	150713	DNA repair	transcriptional repressor of PHR1
YGL175C	SAE2______	+1.28	84212	108065	meiosis, recombination	unknown
YGR282C	BGL2______	+2.13	3499581	7441668	cell wall biogenesis	endo-beta-1,3-glucanase
YIL075C	RPN2______	+1.63	732053	1193861	tRNA processing	26S proteasome subunit)
YJL176C	SWI3______	+2.08	258408	537167	transcription	component of SWI/SNF global activator complex
YKL172W	EBP2______	-1.12	1386896	1236875	unknown	unknown; EBNA1-binding protein homolog
YLR106C	__________	-1.17	61798	52727	unknown	unknown; similar to Rnh70p
YMR208W	ERG12_____	+1.86	385581	716514	sterol metabolism	mevalonate kinase
YNL267W	PIK1______	+1.04	53950	56155	cytokinesis	phosphatidylinositol 4-kinase
YOR005C	DNL4______	+1.80	193333	347600	DNA repair	DNA ligase IV homologue
YOR381W	FRE3______	+1.13	68242	77063	unknown	unknown; similar to Fre2p
YPR078C	__________	+2.70	114973	310097	unknown	unknown
YBR056W	__________	+2.15	212092	455285	unknown	unknown; similar to glucan-1,3-beta-glucosidase
YCLX06C	__________	+1.07	290876	312173
YDL173W	__________	+1.77	325757	575974	unknown	unknown
YDR294C	DPL1______	+1.74	282930	493418	phospholipid metabolism	dihydrosphingosine phosphate lyase
YEL076C	__________	+1.46	135836	198000	unknown	unknown; similar to other subtelomerically-encoded proteins
YGR096W	__________	+1.16	122051	141811	unknown	unknown
YHR110W	ERP5______	-1.00	376347	375415	membrane trafficking; secretion (putative)	unknown
YJR142W	__________	+1.66	215907	357605	unknown	unknown; similar to thiamine pyrophosphokinase
YLR289W	GUF1______	-1.03	68973	66853	unknown	GTPase; similar to E. coli LepA
YMR029C	__________	+1.18	245318	290329	unknown	unknown
YNL075W	IMP4______	+1.03	432105	443874	rRNA processing	U3 snoRNP protein
YOR193W	__________	+1.37	301315	412613	unknown	unknown
YPL173W	MRPL40____	-1.23	338208	274870	protein synthesis	ribosomal protein, mitochondrial L40
YAR037W	__________	-1.00	44987	44864
YBR256C	RIB5______	+1.23	601635	742971	flavin biosynthesis	riboflavin synthase, alpha chain
YDR125C	ECM18_____	+1.01	73332	73941	cell wall biogenesis	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YDR494W	__________	-1.13	222691	196573	unknown	unknown
YER180C	ISC10_____	+1.13	121264	137078	meiosis, spore formation	unknown
YGL187C	COX4______	+1.57	994695	1561810	oxidative phosphorylation	cytochrome-c oxidase subunit IV
YGR294W	__________	+2.21	378448	836661	unknown	PAU1 unknown; family
YIL086C	__________	-1.07	120675	112786	unknown	unknown
YJL188C	__________	-1.68	9092814	5423279	unknown	unknown
YKL184W	SPE1______	+1.23	801414	986738	polyamine biosynthesis	ornithine decarboxylase
YLR118C	__________	-1.33	226093	170217	unknown	unknown
YMR220W	ERG8______	+1.81	470432	849148	sterol metabolism	phosphomevalonate kinase
YNL279W	PRM1______	+1.26	79743	100161	mating (putative)	unknown; pheromone-regulated membrane protein
YOR017W	PET127____	+1.35	272532	369056	protein synthesis	mitochondrial translation
YOR393W	ERR1______	+1.45	99421	144111	unknown	enolase homolog
YPR090W	__________	+1.33	121428	161575	unknown	unknown
YBR068C	BAP2______	-1.32	46135	34871	transport	branched-chain amino acid permease
YCR006C	__________	-1.33	58946	44216	unknown	unknown
YDL185W	TFP1______	+1.39	898860	1248879	vacuolar acidification	vacuolar H+-ATPase subunit
YDR306C	__________	+1.05	102978	107779	unknown	unknown
YER009W	NTF2______	-1.29	1749688	1353480	nuclear protein targeting	nuclear transport factor
YGR108W	CLB1______	-1.82	554200	304433	cell cycle	G2/M cyclin
YHR122W	__________	-1.26	592873	471921	unknown	unknown
YJR154W	__________	+1.80	74714	134724	unknown	unknown
YLR301W	__________	-1.14	683990	598011	unknown	unknown
YMR040W	__________	+1.58	134315	212529	unknown	unknown; similar to Ykl065p
YNL087W	__________	+1.35	832117	1121769	unknown	unknown
YOR205C	__________	+1.15	160573	184947	unknown	unknown
YPL184C	__________	+1.06	59652	62979	unknown	unknown
YBL005W	PDR3______	-1.19	140967	118342	transport	transcription factor
YBR268W	MRPL37____	-1.24	289429	233246	protein synthesis	ribosomal protein, mitochondrial L37
YDL007W	RPT2______	+1.36	510248	693219	protein degradation	26S proteasome subunit
YDR137W	RGP1______	+1.09	168655	183665	unknown	unknown
YDR506C	__________	+1.71	67703	115815	unknown	unknown; similar to Fet5p
YFL005W	SEC4______	+1.36	292748	397937	secretion	ras-like GTPase; post-Golgi
YGL199C	__________	+1.23	140729	172844	unknown	unknown
YHL006C	__________	+1.33	70315	93219	unknown	unknown
YIL098C	FMC1______	-2.03	199509	98091	respiration (putative)	production or assembly of mitochondrial cytochromes
YJL200C	__________	+1.11	748185	832504	unknown	unknown; similar to aconitase, has potential mitochondrial
YKL196C	YKT6______	-1.65	670544	406443	secretion	ER-to-Golgi v-SNARE
YLR130C	ZRT2______	-1.16	369432	318833	transport	zinc transporter
YML007W	YAP1______	+1.77	367028	650678	oxidative stress	transcriptional activator
YMR232W	FUS2______	-1.35	131954	97385	mating; cell fusion	fus1 suppressor
YNL289W	PCL1______	+1.67	691983	1156419	cell cycle	G1/S cyclin
YOR029W	__________	+1.05	69548	73370	unknown	unknown
YPL007C	TFC8______	+1.25	110781	138420	transcription	TFIIIC subunit
YPR102C	RPL11A____	-1.41	14550178	10289704	protein synthesis	ribosomal protein L11A
YBR080C	SEC18_____	+1.64	222834	364943	secretion	NSF; vesicle fusion
YCR018C	SRD1______	+2.04	44866	91560	rRNA processing	nucleolar protein
YDL197C	ASF2______	+1.36	90802	123771	transcription	anti-silencing protein
YER019C	SBH2______	+1.46	148047	216331	secretion	ER protein translocation complex subunit
YGL007W	__________	+1.36	44197	60230	unknown	unknown
YGR118W	RPS23A____	-1.82	12887537	7078250	protein synthesis	ribosomal protein S23A
YHR133C	__________	-1.82	865138	474611	unknown	unknown
YJL007C	__________	-2.25	125611	55894	unknown	unknown
YKL006W	RPL14A____	-2.23	7566751	3400692	protein synthesis	ribosomal protein L14A
YLL007C	__________	-1.13	174917	155204	unknown	unknown
YNL099C	__________	+1.11	266753	296515	unknown	unknown
YOL007C	CSI2______	+2.24	350617	784681	cell wall biogenesis	chitin synthase 3 subunit
YOR217W	RFC1______	+1.16	353757	410500	DNA replication	DNA replication factor C 95 KD subunit
YPL196W	__________	+1.57	161638	254165	unknown	unknown
YAR064W	__________	+2.09	59172	123576	unknown	unknown
YBL017C	PEP1______	+1.44	98304	141861	vacuolar protein targeting	CPY sorting receptor
YBR280C	__________	+1.47	69438	101800	unknown	unknown; similar to Srm1p/Prp20p
YDL019C	__________	-1.08	251448	231885	unknown	unknown; similar to Swh1p
YDR149C	__________	+1.00	58226	58254	unknown	unknown
YDR518W	EUG1______	-1.10	182554	165801	protein folding	protein disulfide isomerase
YFL014W	HSP12_____	+1.78	231775	412806	glucose and lipid utilization	heat shock protein
YGL211W	__________	+1.40	126433	177190	unknown	unknown
YHL015W	RPS20_____	-1.86	8556015	4603325	protein synthesis	ribosomal protein S20
YIL109C	SEC24_____	+1.65	624600	1029235	secretion	vesicle coat component
YJL212C	OPT1______	-2.02	407596	202027	transport	oligopeptide transporter
YKL208W	CBT1______	-1.47	106806	72503	mRNA processing, COB mRNA	unknown
YLR142W	PUT1______	+3.84	96639	371283	proline utilization	proline oxidase
YML016C	PPZ1______	+2.36	187226	442669	stress response	ser/thr phosphatase
YMR244W	__________	+1.09	72820	79391	unknown	unknown; similar to Nca3p
YNL301C	RPL18B____	-1.53	8500229	5560438	protein synthesis	ribosomal protein L18B
YOR041C	__________	+1.95	162472	316153	unknown	unknown
YPL019C	PHM2______	-2.24	304810	136375	phosphate metabolism (putative)	polyphosphate synthetase (putative)
YPR114W	__________	+1.28	308506	393852	unknown	unknown
YBR090C	__________	-1.17	258762	221879	unknown	unknown
YCR028C	FEN2______	-1.14	65478	57320	unknown	unknown; similar to Dal5p and members of the allantoate
YDL209C	__________	-1.06	126343	118746	unknown	unknown
YDR328C	SKP1______	+1.11	493151	549248	mitosis	kinetochore protein
YER031C	YPT31_____	-1.96	843745	430175	secretion	rab GTPase; intra-Golgi
YGL019W	CKB1______	-1.45	438971	302008	salt tolerance	casein kinase II subunit
YGR130C	__________	+1.43	198457	283024	unknown	unknown; similar to Entamoeba histolytica myosin heavy chain
YHR143W	__________	-1.29	214495	165824	unknown	unknown
YJL019W	__________	+1.52	61385	93612	unknown	unknown
YKL018W	__________	-1.13	218993	193488	unknown	unknown
YLL019C	KNS1______	+2.40	80027	192163	unknown	protein kinase
YLR324W	__________	+1.48	80560	119537	unknown	unknown
YMR061W	RNA14_____	-1.09	225210	205997	mRNA 3'-end processing	cleavage/polyadenylation factor CF I component
YNL111C	CYB5______	-1.16	506736	436341	lipid metabolism	cytochrome b5
YOL019W	__________	+2.95	237512	701639	unknown	unknown
YOR229W	WTM2______	+1.02	227970	232754	transcription	shared subunit of RNA polymerases I, II, and III
YPL208W	__________	+1.01	209140	210348	unknown	unknown
YBL029W	__________	+1.24	218556	271034	unknown	unknown
YBR292C	__________	-1.05	70543	67345	unknown	unknown
YDL031W	DBP10_____	-1.19	342698	288319	unknown	unknown; similar to RNA helicases
YDR161W	TCI1______	-1.43	365421	255164	unknown	interacts with PP2C
YDR530C	APA2______	+1.21	103491	125047	purine metabolism	ATP adenylyltransferase II
YFL024C	EPL1______	+1.19	50568	59993	unknown	putative chromatin protein

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YGL223C	__________	+1.03	95872	98713	unknown	unknown
YHL027W	RIM101____	+2.17	197988	429018	meiosis	transcription factor
YIL121W	__________	+1.26	111648	140982	unknown	unknown; major facilitator superfamily
YJL225C	__________	+2.44	1399098	3416003	unknown	unknown; similar to other subtelomerically-encoded proteins
YKL220C	FRE2______	+1.14	65218	74302	iron homeostasis	ferric (and cupric) reductase
YLR154C	__________	+1.02	128425	130881	unknown	unknown
YML028W	TSA1______	+1.34	5529119	7407161	oxidative stress response	thiol-specific
YNL313C	__________	+1.03	126813	131077	unknown	unknown
YOR053W	__________	+1.08	858923	929261	unknown	unknown; similar to protamines
YPL031C	PHO85_____	+1.12	350812	392927	phosphate metabolism; cell cycle; glycogen metabolism	protein kinase
YPR126C	__________	-1.09	254493	234222	unknown	unknown
YBR102C	EXO84_____	+1.47	141696	207703	secretion	exocyst complex subunit
YCR039C	MATALPHA2_	-2.67	426491	159918	transcription	a-specific gene repressor
YDL221W	__________	+1.36	113727	155118	unknown	unknown
YDR340W	__________	-1.64	2831165	1729112	unknown	unknown; similar to Cyc1/Cyp3 transcription activator
YER042W	MXR1______	-1.30	461464	355530	oxidative stress response	peptide-methionine sulfoxide reductase
YGL031C	RPL24A____	-1.88	12332643	6575454	protein synthesis	ribosomal protein L24A
YGR142W	BTN2______	-1.00	383280	383065	unknown	unknown
YHR155W	__________	-1.31	70838	54157	unknown	unknown; similar to Sip3p
YJL031C	BET4______	+1.15	275588	318190	protein processing	geranylgeranyl transferase subunit
YKL030W	__________	-2.65	1139668	429717	unknown	unknown
YLL031C	GPI13_____	-1.09	99282	90751	protein processing	phosphoryltransferase (GPI anchor synthesis)
YLR336C	SGD1______	+1.13	128042	144156	signaling (putative)	high osmolarity pathway
YMR073C	__________	-1.21	301603	249740	unknown	unknown; similar to rat cytochrome b5
YNL123W	__________	+1.41	294513	414051	unknown	unknown
YOL031C	__________	+1.20	478254	572997	unknown	unknown; similar to Yarrowia lipolytica Sls1 protein
YOR241W	MET7______	-1.35	671532	496289	methionine biosynthesis	folylpolyglutamate synthase
YPL220W	RPL1A_____	-1.14	15643145	13757125	protein synthesis	ribosomal protein L1A
YBL041W	PRE7______	+1.54	552183	851612	protein degradation	20S proteasome subunit
YDL043C	PRP11_____	+1.47	87866	129518	mRNA splicing	U2, U5, U4/U6 snRNP protein
YDR171W	HSP42_____	+4.71	114681	539730	cytoskeleton assembly	heat shock protein, similar to HSP26
YDR542W	__________	+2.76	181597	500930	unknown	unknown
YFL034W	__________	+1.50	70727	106145	unknown	unknown
YGL234W	ADE5,7____	-1.08	714992	663869	purine biosynthesis	phosphoribosylamine-glycine ligase and phosphoribosylformylglycinamidine cyclo-ligase
YHL038C	CBP2______	+1.08	170356	183309	mRNA splicing, COB mRNA	pre-mRNA binding protein
YIL133C	RPL16A____	-1.57	6943118	4418386	protein synthesis	ribosomal protein L16A
YJR011C	__________	-1.94	263170	135363	unknown	unknown
YKR007W	__________	-1.14	257206	226273	unknown	unknown
YLR164W	__________	-1.26	62894	50063	unknown	unknown; similar to Sdh4p
YML038C	YMD8______	+1.48	345837	511558	unknown	unknown; similar to vanadate resistance protein Gog5p
YMR268C	PRP24_____	+1.07	201813	216473	mRNA splicing	U4/U6 snRNP protein
YNL325C	FIG4______	+1.51	144319	218467	mating (putative)	unknown; induced by mating factor
YOR065W	CYT1______	+1.85	846119	1567253	oxidative phosphorylation	cytochrome c1
YPL043W	NOP4______	+1.01	561462	567908	rRNA processing	RNA binding protein
YBR113W	__________	+1.30	235276	305228	unknown	unknown
YCR051W	__________	-1.14	535543	470247	unknown	unknown; similar to ankyrin and coiled-coil protein
YDL233W	__________	+2.34	129215	302089	unknown	unknown
YDR352W	__________	+1.10	266357	294226	unknown	unknown
YER052C	HOM3______	+1.47	665588	976889	Met. and Thr. biosynthesis	aspartate kinase
YGL043W	DST1______	-1.24	73322	59294	transcription	elongation factor TFIIS
YGR154C	__________	+1.35	89692	121513	unknown	unknown
YHR167W	__________	-1.10	115300	104579	unknown	unknown
YJL044C	GYP6______	+1.01	328326	332710	secretion	GTPase-activating protein for Ypt6
YKL041W	VPS24_____	-1.01	260731	258896	vacuolar protein targeting	component of class E protein complex
YLL043W	FPS1______	+1.27	242683	309149	transport	glycerol channel protein
YLR348C	DIC1______	-1.06	210197	198913	transport	mitochondrial dicarboxylate carrier
YNL135C	FPR1______	+1.50	809417	1211930	protein folding	peptidyl-prolyl cis-trans isomerase
YOL043C	NTG2______	+1.39	157217	218329	DNA repair	endonuclease III-like glycosylase
YOR253W	__________	-1.24	512986	414188	unknown	unknown
YPL232W	SSO1______	+1.58	1095780	1726819	secretion	post-Golgi t-SNARE
YBL053W	__________	-1.06	139618	131746	unknown	unknown
YDL055C	PSA1______	+1.23	3291838	4052191	mannose metabolism	mannose-1-phosphate guanyltransferase
YDR182W	CDC1______	-1.00	277750	276784	Mn2+ ion homeostasis	unknown
YFL046W	__________	+1.02	214354	219619	unknown	unknown; similar to myosin heavy chain A
YGL246C	RAI1______	-1.16	378773	327357	unknown	unknown; similar to C. elegans DOM-3 (GB:1004375)
YHL049C	__________	+1.70	247415	420801	unknown	unknown; similar to other subtelomerically-encoded proteins
YIL145C	__________	+1.01	543712	548152	unknown	unknown; similar to E. coli pantoate beta-alanine ligase
YJR023C	__________	-1.11	115997	104589	unknown	unknown; similar to sodium channel proteins
YKR019C	IRS4______	+1.43	82682	117870	silencing (rDNA)	unknown
YLR176C	RFX1______	+1.20	80416	96844	unknown	unknown; DNA binding protein
YMR280C	CAT8______	+1.97	225578	444648	gluconeogenesis	transcription factor
YNL337W	__________	+1.57	83670	131205	unknown	unknown
YOR077W	RTS2______	+1.37	89648	122732	unknown	unknown; similar to mouse KIN7 protein
YPL055C	__________	+1.69	222703	376903	unknown	unknown
YPR148C	__________	+1.67	515513	861859	unknown	unknown
YBR125C	PTC4______	+1.19	239183	283847	unknown	protein phosphatase type 2C
YCR063W	__________	+1.26	60803	76595	unknown	unknown; similar to Xenopus G10, a developmentally-regulated
YDL245C	HXT15_____	+1.57	102642	161417	transport	hexose permease
YDR364C	CDC40_____	-1.17	189530	161604	cell cycle and mRNA splicing	unknown
YER062C	HOR2______	-1.00	1418561	1417705	glycerol metabolism	DL-glycerol-3-phosphatase
YGL055W	OLE1______	+1.46	2926058	4258201	fatty acid metabolism	delta-9-fatty acid desaturase
YGR162W	TIF4631___	+1.33	590834	784515	protein synthesis	mRNA cap-binding protein (eIF4F) 150K subunit
YHR179W	OYE2______	+1.32	5340387	7031279	unknown	NAPDH dehydrogenase (old yellow enzyme)
YJL056C	ZAP1______	+2.16	79756	171948	transport (Zn)	transcription factor
YKL053W	__________	+1.58	229213	361636	unknown	unknown
YLL055W	__________	+1.16	53702	62226	unknown	unknown; similar to Dal5p and members of the allantoate
YLR360W	VPS38_____	+1.28	212879	272074	vacuolar protein targeting	unknown
YMR095C	SNO1______	+1.33	158045	209755	unknown	unknown; induced in stationary phase
YNL147W	LSM7______	-1.36	446645	329133	mRNA splicing (putative)	similar to snRNA-associated protein
YOL053W	__________	+1.25	170148	212435	unknown	unknown
YOR265W	RBL2______	-1.14	329898	289189	cytoskeleton	beta-tubulin binding protein
YPL244C	HUT1______	+1.13	206752	232902	unknown	unknown
YBL065W	__________	-1.02	36367	35522	unknown	unknown
YDL067C	COX9______	+1.13	634717	714957	oxidative phosphorylation	cytochrome c oxidase assembly
YDR194C	MSS116____	-1.06	393161	372084	mRNA splicing, mitochondrial	RNA helicase
YFL058W	THI5______	+1.92	150508	288465	pyrimidine biosynthesis	unknown
YGL258W	__________	+1.42	87039	123219	unknown	unknown
YHR009C	__________	+1.53	237697	364296	unknown	unknown
YJR034W	PET191____	-1.00	158294	158034	respiration	cytochrome c oxidase assembly
YKR031C	SPO14_____	+1.30	45603	59268	meiosis	phospholipase D

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YLR188W	MDL1______	+1.47	139252	204649	transport	ATP-binding cassette (ABC) family
YML058W	SML1______	+2.09	1338830	2798645	DNA replication (putative)	regulator of ribonucleotide reductase (putative)
YMR291W	__________	+2.00	119753	239329	unknown	unknown
YNR010W	CSE2______	+1.33	140856	186966	mitosis, chromosome segregation	kinetochore protein (putative)
YOR089C	VPS21_____	+1.54	545044	838783	endocytosis	rab5-like GTPase
YPL065W	VPS28_____	-1.09	177321	162056	vacuolar protein targeting	cytoplasmic protein
YBR137W	__________	+1.02	43550	44459	unknown	unknown
YCR073W	SOL2______	+1.03	30513	31298	tRNA splicing, putative	unknown
YDR009W	GAL3______	+1.18	54901	64587	galactose metabolism	galactokinase
YDR374C	__________	+1.59	45628	72375	unknown	unknown
YER071C	__________	+1.34	88448	118252	unknown	unknown
YGL067W	NPY1______	-1.07	43506	40496	NAD metabolism	NAD+ pyrophosphatase
YGR174C	CBP4______	+1.12	270842	303099	respiration	ubiquinol--cytochrome-c reductase assembly factor
YHR191C	CTF8______	+1.01	222448	225774	mitosis (putative)	kinetochore protein (putative)
YJL068C	__________	+1.56	216997	338209	unknown	unknown; similar to human esterase D
YKL065C	YET1______	+2.51	563320	1412904	unknown	ER 25 kDa transmembrane protein
YLL067C	__________	-1.08	53874	49655	unknown	unknown; similar to other subtelomerically-encoded proteins
YLR372W	SUR4______	-1.26	887075	706403	fatty acid metabolism	conversion of 24-carbon to 26-carbon fatty acids
YMR107W	__________	+1.40	65006	90845	unknown	unknown
YNL159C	__________	+1.51	173303	261251	unknown	unknown
YOL065C	INP54_____	+1.05	155873	163201	unknown	putative inositol polyphosphate 5-phosphatase
YOR277C	__________	-1.50	1404563	937221	unknown	unknown
YPL255W	BBP1______	-1.23	171195	138913	cell cycle and meiosis	unknown
YMR322C	__________	+1.72	68508	117835	unknown	unknown
YBL077W	__________	-1.26	1181864	937685	unknown	unknown
YDL079C	MRK1______	+1.06	87490	92522	unknown	protein kinase
YDR206W	EBS1______	+1.17	117122	137292	unknown	unknown; similar to Est1p; bcy1 suppressor
YFR002W	NIC96_____	+1.14	246590	281929	nuclear protein targeting	nuclear pore protein
YGR007W	MUQ1______	+1.33	275318	365806	phospholipid metabolism	choline phosphate cytidylyltransferase
YHR021C	RPS27B____	-2.04	4675332	2292060	protein synthesis	ribosomal protein S27B
YIL168W	SDL1______	+1.51	170241	257815	gluconeogenesis	serine dehydratase
YJR046W	TAH11_____	+1.88	285333	535531	unknown	unknown
YKR043C	__________	+1.45	694959	1005041	unknown	unknown
YLR200W	YKE2______	-1.20	337113	281217	cytoskeleton	microtubule nucleation
YML070W	DAK1______	+1.81	277254	500469	carbohydrate metabolism; stress response	dihydroxyacetone kinase
YMR302C	PRP12_____	+1.88	177184	332436	rRNA processing	mitochondrial inner membrane protein
YNR022C	__________	-1.45	330397	227695	unknown	unknown
YOR101W	RAS1______	-1.54	479506	311695	signaling, Ras pathway	GTP-binding protein, ras homolog
YPL077C	__________	+1.29	107219	138049	unknown	unknown; similar to Ybr197p
YPR168W	NUT2______	+1.24	56691	70418	mating type switching	negative regulator of HO expression
YBR149W	ARA1______	+1.80	459961	827838	arabinose metabolism	arabinose dehydrogenase
YCR087W	__________	-1.25	987941	791087	unknown	unknown
YDR021W	FAL1______	-2.04	353064	173035	rRNA processing	RNA helicase
YDR386W	MUS81_____	+1.23	77514	94962	DNA repair (putative)	unknown
YER083C	__________	+1.32	361065	477966	unknown	unknown
YGL079W	__________	+1.04	198856	206945	unknown	unknown
YGR186W	TFG1______	+1.00	647420	647496	transcription	TFIIF 105 kD subunit
YHR203C	RPS4B_____	+1.03	15488536	15996146	protein synthesis	ribosomal protein S4B
YJL080C	SCP160____	+1.18	952818	1128252	mitosis, chromosome transmission	unknown
YKL077W	__________	-1.36	606782	445196	unknown	unknown
YLR012C	__________	-1.42	196286	138274	unknown	unknown
YLR384C	IKI3______	+1.20	927175	1108876	killer toxin sensitivity	unknown
YMR119W	__________	+1.39	126716	176401	unknown	unknown
YNL171C	__________	+1.54	112297	172757	unknown	unknown
YOL077C	__________	-1.62	1520105	935797	unknown	unknown; similar to C. elegans Kq2H4.3 protein
YOR289W	__________	+2.01	150029	302271	unknown	unknown
YPL265W	DIP5______	-1.17	484005	413129	transport	dicarboxylic amino acid permease
YBL089W	__________	-1.04	32221	30986	unknown	major facilitator superfamily
YDL091C	__________	+1.37	103726	141870	unknown	unknown
YDR214W	__________	+1.95	508817	991182	unknown	unknown
YFR014C	CMK1______	+1.14	119051	135913	signaling	calmodulin-dependent protein kinase
YGR019W	UGA1______	+1.65	268114	443541	GABA metabolism	4-aminobutyrate aminotransferase (GABA transaminase)
YHR032W	__________	+1.77	206500	365600	unknown	major facilitator superfamily
YIR002C	MPH1______	+1.36	182210	247179	unknown; mutator null phenotype	unknown; similar to ATP-dependent RNA helicases
YJR058C	APS2______	+1.30	245757	319142	secretion	AP-1 complex subunit
YKR055W	RHO4______	-1.02	110947	108821	signaling	GTP-binding protein, rho family
YLR212C	TUB4______	+1.01	181613	183025	cytoskeleton	gamma-tubulin
YML082W	__________	+1.27	157646	199908	unknown	unknown; similar to O-succinylhomoserine (thiol)-lyase
YMR312W	__________	+1.17	201366	235939	unknown	unknown
YNR034W	SOL1______	+1.31	135466	176876	tRNA splicing, putative	unknown
YOR113W	AZF1______	+1.28	73788	94190	transcription (putative)	similar to Zn-finger transcription factors
YPL089C	RLM1______	+3.14	374676	1177804	cell wall organization	MADS box transcription factor
YPR180W	AOS1______	+1.42	274140	389236	protein degradation, Smt3p-mediated	Smt3p activating protein
YBR161W	__________	+1.09	114149	124661	unknown	unknown; similar to Sur1p, Hoc1p, and Och1p
YCR097W	HMRA1_____	-1.34	54452	40510
YDR033W	MRH1______	-1.50	2245130	1497102	unknown	similar to Yro2p and Hsp30p
YDR398W	__________	+1.20	199533	238510	unknown	unknown
YGL091C	NBP35_____	+1.25	269034	337503	unknown	unknown; essential; similar to bacterial partitioning ATPases
YGR198W	__________	+1.07	505016	538102	unknown	unknown
YJL092W	HPR5______	+1.36	111290	151511	meiosis	DNA helicase
YKL089W	MIF2______	+1.22	135973	165685	mitosis	centromere protein
YLR024C	UBR2______	+1.39	376699	523326	protein degradation, ubiquitin-mediated	ubiquitin-protein ligase
YLR396C	VPS33_____	+1.27	413252	523326	vacuolar protein targeting	Sec1 protein family
YMR130W	__________	-1.22	399244	328339	unknown	unknown
YNL183C	NPR1______	+1.15	136923	158123	transport	protein kinase; regulates activity of nitrogen source transporters
YOL089C	HAL9______	+1.37	152541	208281	salt tolerance	transcription factor (putative)
YOR300W	__________	+1.05	170012	179287	unknown	unknown
YPL277C	__________	+2.11	275561	580911	unknown	unknown
YAL009W	SPO7______	-1.00	36236	36233	meiosis	unknown
YBR173C	UMP1______	+1.23	276450	340062	protein degradation, ubiquitin-mediated	20S proteasome maturation factor
YCRX03C	__________	+1.17	42790	50202
YDR044W	HEM13_____	-1.23	242674	196658	heme biosynthesis	coproporphyrinogen III oxidase
YDR411C	__________	+1.77	170328	301411	unknown	unknown
YER106W	__________	+1.08	47954	51928	unknown	unknown
YGL104C	__________	+1.20	68483	82130	unknown	unknown; similar to glucose transport proteins
YGR211W	ZPR1______	+1.14	389578	444342	unknown	unknown; zinc finger protein
YIL008W	URM1______	-1.11	278700	251129	protein modification	ubiquitin-like protein
YJL105W	__________	+1.40	68037	94945	unknown	unknown; similar to Ykr029p
YKL101W	HSL1______	+1.93	258177	498319	cell cycle	negative regulator of swe1 kinase
YLR409C	__________	-1.14	72025	63122	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YNL196C	SLZ1______	-1.19	90654	76011	meiosis	unknown
YOL102C	TPT1______	-1.21	204888	169228	tRNA splicing	2'-phosphotransferase
YOR312C	RPL20B____	-1.66	10449881	6293726	protein synthesis	ribosomal protein L20B
YPR007C	SPO69_____	-2.06	176322	85765	sporulation	unknown
YBL101W	TY2A______	+1.68	1038585	1742658	unknown	unknown
YCL007C	CWH36_____	-1.76	493225	280600	cell wall biogenesis	unknown
YDL104C	QRI7______	-1.08	98332	90757	unknown	unknown; similar to E. coli orfx gene
YDR227W	SIR4______	+1.03	61341	62896	silencing	nuclear coiled-coil protein, regulator of silencing
YEL008W	__________	-1.05	56848	53890	unknown	unknown
YFR027W	ECO1______	-1.02	66424	64838	mitosis, sister chromatid cohesion (putative)	unknown
YGR030C	POP6______	-1.38	134289	97389	tRNA processing	RNase P and RNase MRP subunit
YHR044C	DOG1______	-1.13	287304	253734	2-deoxyglucose resistance	2-deoxyglucose-6-phosphate phosphatase
YIR015W	RPR2______	-1.09	46634	42738	tRNA processing	RNase P subunit
YJR071W	__________	+1.16	288757	335592	unknown	unknown
YKR068C	BET3______	+1.18	414647	488113	secretion	SNARE docking complex assembly
YLR225C	__________	+1.94	211763	411089	unknown	unknown
YNL008C	__________	+1.25	459743	575485	unknown	unknown; similar to Mdj2p, E. coli DnaJ, and other DnaJ-like
YNR047W	__________	+1.12	844283	948454	unknown	unknown
YOR126C	IAH1______	+1.26	228588	287186	unknown	isoamyl acetate hydrolytic enzyme
YPL102C	__________	+1.33	75546	100237	unknown	unknown
YPR193C	HPA2______	+1.42	69493	98598	chromatin structure	histone acetyltransferase complex subunit
YAL021C	CCR4______	-1.04	37464	35989	catabolite repression	component of CCR4 transcriptional complex
YBR185C	MBA1______	-1.27	124397	97864	respiration	mitochondrial respiratory complex assembly
YCRX15W	__________	+1.10	48347	53000
YDR056C	__________	-1.61	438049	271979	unknown	unknown
YDR423C	CAD1______	+1.10	139021	152558	transcription	basic leu zipper transcription factor
YER118C	SHO1______	-1.12	300928	269064	signaling, high osmolarity pathway	transmembrane osmosensor
YGL116W	CDC20_____	-1.24	161772	130804	mitosis	activator of the anaphase promoting complex
YGR223C	__________	+1.46	146962	213915	unknown	unknown
YIL019W	__________	-1.41	260146	184746	unknown	unknown
YJL117W	PHO86_____	-1.31	718098	547428	transport	inorganic phosphate permease
YKL113C	RAD27_____	-1.14	198946	175020	DNA repair	ssDNA endonuclease
YLR047C	__________	+1.01	42206	42517	unknown	unknown
YLR419W	__________	+1.35	269852	365543	unknown	unknown; similar to pre-mRNA splicing factors
YNL208W	__________	+3.41	1442543	4925930	unknown	unknown
YOL112W	MSB4______	+1.82	304511	554840	unknown	unknown; suppresses bud emergence defect
YOR324C	__________	+1.32	69492	91629	unknown	unknown
YPR019W	CDC54_____	+1.43	185636	265104	DNA replication	MCM initiator complex
YBL112C	__________	+3.02	152394	460627	unknown	unknown
YCL020W	__________	+1.84	939302	1726316	unknown	unknown
YDL116W	NUP84_____	-1.04	196269	188649	nuclear protein targeting	nuclear pore protein
YEL019C	MMS21_____	+1.07	53915	57510	DNA repair	unknown
YHR055C	CUP1-2____	-1.47	3640652	2473686	Cu2+ ion homeostasis	metallothionein
YIR024C	GIF1______	+1.21	140712	170449	cell cycle, G1	unknown
YJR084W	__________	+1.34	186962	250783	unknown	unknown; similar to human sodium channel protein HI
YKR080W	MTD1______	-1.55	292510	188734	nucleotide metabolism	NAD-dependent 5,10-methylenetetrahydrafolate dehydrogenase
YLR235C	__________	+1.06	41590	43998	unknown	unknown
YML104C	MDM1______	+1.08	74491	80597	cytoskeletal organization	intermediate filament protein
YNL020C	ARK1______	+1.58	210380	333094	unknown	protein kinase
YNR059W	MNT4______	+1.43	79149	113054	protein glycosylation	mannosyltransferase
YOR138C	__________	+1.74	146911	255832	unknown	unknown
YPL114W	__________	+1.27	70739	89682	unknown	unknown
YAL032C	PRP45_____	+1.69	67438	114198	mRNA splicing	U2, U5, U6 snRNP protein
YBR197C	__________	+1.08	93151	100381	unknown	unknown
YDR068W	DOS2______	+1.40	135449	190227	unknown	unknown
YDR435C	PPM1______	+2.81	67777	190355	protein modification	carboxymethyltransferase
YER129W	PAK1______	+1.12	64554	72127	DNA replication	protein kinase; suppresses pol. alpha mutations
YGL128C	__________	+1.34	213883	286735	unknown	unknown; similar to E. coli DnaJ and other DnaJ-like
YGR235C	__________	+1.52	306863	467320	unknown	unknown
YIL031W	ULP2______	+1.33	62684	83163	unknown	unknown; suppresses mif2 mutation
YJL129C	TRK1______	+2.33	246448	573836	transport	potassium permease
YKL125W	RRN3______	+1.24	215612	267143	transcription	RNA polymerase I transcription factor
YLR059C	REX2______	+1.25	272832	340095	RNA processing	RNA exonuclease
YLR429W	CRN1______	+1.48	422546	624253	cytoskeleton	coronin
YMR164C	MSS11_____	+1.17	1519379	1772519	starch metabolism	(putative) transcriptional repressor
YNL220W	ADE12_____	-1.87	1878099	1002582	purine biosynthesis	adenylosuccinate synthetase
YOL124C	__________	-1.54	708355	458819	unknown	unknown
YOR336W	KRE5______	+1.25	364828	456333	cell wall biogenesis	unknown; ER resident glycoprotein
YPR031W	__________	+1.14	363741	414409	unknown	unknown; similar to human zinc finger protein PIR:JC2069
YBR011C	IPP1______	-1.24	3004562	2413832	phosphate metabolism	inorganic pyrophosphatase, cytoplasmic
YCL032W	STE50_____	+1.10	154437	170506	signaling	pheromone response
YDL128W	VCX1______	+1.45	341360	494684	transport	vacuolar H+/Ca(2+) exchanger
YDR251W	PAM1______	+2.27	143452	325575	unknown	unknown; overexpression suppresses PP2A depletion
YEL031W	SPF1______	-1.25	56114	44746	transport	(putative) Ca(2+) ATPase
YFR048W	__________	+1.18	116652	138077	unknown	unknown
YGR049W	SCM4______	+1.28	269067	343926	cell cycle	suppresses cdc4 mutation
YHR065C	RRP3______	+1.07	446075	475506	rRNA processing	RNA helicase
YIR036C	__________	+2.18	121335	263972	unknown	unknown; similar to proteins of the short-chain alcohol
YJR095W	SFC1______	+1.62	44729	72304	transport	mitochondrial succinate-fumarate carrier
YKR092C	SRP40_____	+1.24	614079	762546	transcription (putative)	Suppressor of mutant AC40 subunit of RNA polymerase I and III
YLR247C	__________	+2.49	248944	619486	unknown	unknown; similar to Rad16p
YML116W	ATR1______	-1.27	770291	606070	aminotriazole resistance	transporter (putative)
YNL032W	SIW14_____	-1.21	399597	329475	cell cycle	tyrosine phosphatase
YNR071C	__________	-1.12	55330	49279	unknown	unknown; similar to UDPglucose 4-epimerase
YOR148C	SPP2______	-1.00	190488	190240	mRNA splicing	spliceosome-associated protein
YPL126W	NAN1______	-1.08	1019312	942513	unknown	unknown; nucleolar protein
YAL042W	ERV46_____	+1.06	492339	520616	unknown	unknown; ER vesicle protein
YBR209W	__________	-1.19	59027	49675	unknown	unknown
YDR080W	VPS41_____	+1.33	189555	251397	vacuolar protein targeting	component of vacuolar membrane protein complex
YDR447C	RPS17B____	-1.50	6358907	4240647	protein synthesis	ribosomal protein S17B
YER139C	__________	-1.86	229652	123397	unknown	unknown
YGL140C	__________	-1.06	158612	149367	unknown	major facilitator superfamily
YGR247W	__________	-1.23	82275	66625	unknown	unknown
YIL043C	CBR1______	+1.19	987945	1171904	aminosugars metabolism	cytochrome b reductase
YJL141C	YAK1______	+2.06	162578	335195	signaling	serine-threonine protein kinase
YKL137W	__________	-1.39	179865	129189	unknown	unknown
YLR071C	RGR1______	+1.16	74237	85757	transcription	RNA polymerase II mediator subunit
YLR441C	RPS1A_____	-1.15	15544183	13546537	protein synthesis	ribosomal protein S1A
YNL232W	CSL4______	-1.05	344738	326906	mitosis, chromosome segregation	unknown
YOL136C	PFK27_____	+1.13	385799	437703	fructose metabolism	6-phosphofructo-2-kinase

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YOR346W	REV1______	-1.04	107642	103999	DNA repair	deoxycytidyl transferase
YPR043W	RPL43A____	-1.56	8583171	5500711	protein synthesis	ribosomal protein L34A
YBR021W	FUR4______	-1.18	50421	42732	transport	uracil permease
YCL044C	__________	+1.70	135966	230822	unknown	unknown
YDL138W	RGT2______	+1.88	115663	217741	transport	glucose permease
YEL043W	__________	+1.52	113657	172253	unknown	unknown
YGR061C	ADE6______	+1.11	61722	68433	purine biosynthesis	5'-phosphoribosylformyl glycinamidine synthetase
YHR076W	__________	-1.04	303848	291818	unknown	unknown
YJR107W	__________	+2.00	226986	454566	unknown	unknown; similar to acylglycerol lipase
YKR104W	__________	+1.33	51512	68626	unknown	ATP-binding cassette (ABC) superfamily
YML127W	__________	+1.75	246589	430342	unknown	unknown
YNL042W	BOP3______	+1.31	150199	197325	unknown	unknown; bypass of PAM1
YOR160W	MTR10_____	+1.20	427996	512052	mRNA export	Npl3p import factor
YPL138C	__________	+1.16	196211	227294	unknown	unknown
YAL055W	PEX22_____	-1.41	147675	104723	peroxisome biogenesis (putative)	peroxisomal membrane anchoring protein (puttaive)
YBR221C	PDB1______	-1.08	823995	763141	glycolysis	pyruvate dehydrogenase
YDR092W	UBC13_____	+1.08	222097	239214	protein degradation, ubiquitin-mediated	E2 ub.-conjugating enzyme
YDR459C	__________	+1.21	114016	138262	unknown	unknown; similar to protein PIR:S51289
YER149C	PEA2______	+1.49	115037	171119	mating	unknown
YGL152C	__________	-1.09	72851	67118	unknown	unknown; similar to rat G protein-coupled glutamate
YGR259C	__________	+1.73	54097	93574	unknown	unknown
YIL055C	__________	+1.72	111673	191780	unknown	unknown
YJL153C	INO1______	+2.53	61732	156134	inositol biosynthesis	L-myo-inositol-1-phosphate synthase
YKL149C	DBR1______	+1.12	143512	160895	mRNA splicing	debranching enzyme
YLR083C	EMP70_____	+1.11	68012	75252	secretion (putative)	endosomal membrane protein
YLR453C	RIF2______	+1.40	88015	123638	silencing	RAP1-interacting protein
YMR186W	HSC82_____	+1.53	4517192	6895261	protein folding	chaperonin
YNL244C	SUI1______	-1.48	3047009	2054540	protein synthesis	translation initiation factor 3 (eIF3)
YOL148C	SPT20_____	+1.16	279102	322915	chromatin structure	histone acetyltransferase complex subunit
YOR358W	HAP5______	+1.24	149998	186242	respiration	transcription factor
YPR055W	SEC8______	+1.36	99532	135505	secretion	exocyst complex subunit
YBR033W	__________	-1.04	38684	37235	unknown	unknown; similar to transcription factors, has Zn[2]-Cys[6] cluster domain
YCL056C	__________	-1.09	171601	157031	unknown	unknown
YDL150W	RPC53_____	-1.27	563823	445097	transcription	RNA polymerase III 47 kD subunit
YDR271C	__________	-1.06	95077	89743	unknown	unknown
YEL055C	POL5______	-1.08	146814	136489	DNA replication	DNA polymerase V
YGR073C	__________	+1.21	82693	99850	unknown	unknown
YHR087W	__________	+1.34	70642	94650	unknown	unknown
YJR119C	__________	+1.67	81753	136680	unknown	unknown; similar to human retinoblastoma binding protein 2
YLR267W	BOP2______	+1.76	60680	106643	unknown	unknown; bypass of PAM1
YNL054W	VAC7______	+2.21	255209	564815	vacuole biogenesis	unknown; vacuolar integral membrane protein
YOR172W	__________	+1.16	62153	72280	unknown	unknown; similar to transcription factors
YPL150W	__________	+1.17	62040	72615	unknown	unknown
YAL066W	__________	-1.23	48774	39623	unknown	unknown
YBR233W	PBP2______	-1.19	110770	92887	unknown	interacts with Pab1p
YDR102C	__________	-1.50	47236	31559	unknown	unknown
YDR471W	RPL27B____	-1.95	7839605	4029333	protein synthesis	ribosomal protein L27B
YGL164C	__________	+1.01	58746	59200	unknown	unknown
YGR271W	__________	+1.26	221437	278623	unknown	unknown; similar to Ski2p
YJL165C	HAL5______	+2.95	215220	634622	salt tolerance	putative protein kinase
YKL161C	__________	+1.68	273604	459519	unknown	putative protein kinase
YLR095C	IOC2______	+1.98	125191	247570	unknown	unknown
YLR465C	__________	+1.50	82003	122787	unknown	unknown
YMR197C	VTI1______	+1.36	296166	402102	secretion	cis-Golgi v-SNARE
YNL256W	FOL1______	+1.08	461407	499604	folate biosynthesis	dihydroneopterin aldolase, dihydro-6-hydroxymethylpterin pyrophosphokinase, dihydropteroate synthetase
YOL160W	__________	-1.01	80269	79566	unknown	unknown
YOR370C	MRS6______	+1.48	608864	900474	protein processing	Rab geranylgeranyltransferase regulatory subunit
YPR067W	ISA2______	-1.01	263245	260528	unknown	unknown; Iron Sulfur Assembly -- IscA/NifA homolog
YBR045C	GIP1______	-1.10	32764	29919	glucose repression	(putative) Glc7p regulatory subunit
YCL068C	__________	+1.02	46997	47991	unknown	unknown
YDL162C	__________	-1.15	39636	34542	unknown	unknown
YDR283C	GCN2______	+1.69	178059	301009	protein synthesis	eIF2alpha kinase
YEL066W	HPA3______	+1.20	288155	344401	chromatin structure	histone acetyltransferase complex subunit
YGR085C	RPL11B____	-1.76	13191144	7483737	protein synthesis	ribosomal protein L11B
YHR099W	TRA1______	-4.09	774019	189433	unknown	unknown; similar to human TR-AP
YJR131W	MNS1______	+1.45	154177	223103	protein glycosylation	specific alpha-mannosidase
YLR279W	__________	+1.02	57824	59048	unknown	unknown
YMR018W	__________	+1.42	77387	109781	unknown	unknown; similar to Pex5p/Pas10p (GB:Z49211)
YNL064C	YDJ1______	+1.29	3040879	3934589	mitochondrial and ER protein targeting	HSP70 associated chaperone
YOR184W	SER1______	-1.25	1053646	842899	serine biosynthesis	phosphoserine
YPL162C	__________	+2.10	109856	230703	unknown	unknown
YAR018C	KIN3______	-1.03	143545	139926	unknown	protein kinase
YBR245C	ISW1______	+1.02	67897	68980	unknown	unknown; similar to Drosophila nucleosome remodeling
YDR114C	__________	+1.16	83159	96675	unknown	unknown
YDR483W	KRE2______	+1.27	1076335	1365488	protein glycosylation	alpha-1,2-mannosyltransferase
YER170W	ADK2______	-1.31	154431	117571	purine metabolism	adenylate kinase,
YGL176C	__________	+1.46	100604	146739	unknown	unknown; similar to Discopyge ommata Ca++ channel alpha1
YGR283C	__________	-1.10	555449	505193	unknown	unknown
YIL076W	SEC28_____	+1.03	1053249	1085813	secretion	vesicle coat component
YJL177W	RPL17B____	-1.39	12549637	9048890	protein synthesis	ribosomal protein L17B
YKL173W	SNU114____	-1.05	341150	324253	mRNA splicing	U5 snRNP protein
YLR107W	REX3______	+1.99	186989	371770	RNA processing	RNA exonuclease
YMR209C	__________	-1.37	224893	164661	unknown	unknown
YNL268W	LYP1______	+1.14	264023	301677	transport	lysine permease
YOR006C	__________	+1.24	372117	462123	unknown	unknown
YOR382W	__________	+1.09	156479	169931	unknown	unknown
YPR079W	__________	+1.51	170229	257568	unknown	unknown
YBR057C	MUM2______	+1.03	186425	192909	meiosis	unknown; similar to ubiquitin C-terminal hydrolase
YCLX07W	__________	+1.40	73046	102604
YDL174C	DLD1______	+1.83	395413	721795	pyruvate metabolism	D-lactate dehydrogenase
YDR295C	PLO2______	-1.62	70121	43244	unknown; ploidy-related	unknown
YEL077C	__________	+3.31	1172504	3882577	unknown	unknown
YGR097W	ASK10_____	+2.04	164253	335534	stress response	enhancer of SKN7-dependent transcription
YHR111W	__________	+1.17	624546	728504	unknown	unknown; similar to Uba1p and molybdopterin biosynthesis
YJR143C	PMT4______	+1.33	659066	879237	protein glycosylation	dolichyl phosphate-D-mannose:protein O-D-mannosyltransferase
YLR290C	__________	+1.13	152658	173197	unknown	unknown
YMR030W	__________	+1.28	108686	138766	unknown	unknown
YNL076W	MKS1______	+1.20	223207	267254	signaling, Ras pathway	negative regulator of cAMP-dependent genes
YOR194C	TOA1______	-1.08	372924	344012	transcription	TFIIA 32 kD subunit
YPL174C	NIP100____	-1.10	65725	59788	nuclear protein targeting	(putative) large subunit of dynactin complex

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YAR040C	__________	-1.11	44835	40400
YBR257W	POP4______	+1.16	154723	179661	rRNA and tRNA processing	RNase P and RNase MRP subunit
YDR126W	__________	+1.23	90326	111055	unknown	unknown
YDR495C	VPS3______	+1.46	226070	330271	vacuolar protein targeting	unknown
YER181C	__________	-1.34	205706	153558	unknown	unknown
YGL188C	__________	+1.32	226631	299431	unknown	unknown
YGR295C	COS6______	+3.68	1434247	5278244	unknown	unknown; similar to other subtelomerically-encoded proteins
YIL087C	__________	+1.81	146290	264409	unknown	unknown
YJL189W	RPL39_____	-1.49	4796696	3227435	protein synthesis	ribosomal protein L39
YKL185W	ASH1______	+2.06	669154	1377441	mating type switching	transcription factor
YLR119W	SRN2______	+1.00	57649	57745	RNA export, putative	unknown
YMR221C	__________	+1.10	372882	408971	unknown	major facilitator superfamily
YNL280C	ERG24_____	-1.21	90790	74937	sterol metabolism	C-14 sterol reductase
YOR018W	ROD1______	+1.53	227166	346577	drug resistance	unknown
YOR394W	__________	+2.63	177599	467447	unknown	unknown; similar to PAU1 family
YPR091C	__________	+1.12	77670	87299	unknown	unknown
YBR069C	TAT1______	+1.34	232303	311517	transport	amino acid permease
YCR007C	__________	+3.42	78867	269884	unknown	unknown; similar to subtelomerically-encoded proteins
YDL186W	__________	+1.08	110662	119254	unknown	unknown
YDR307W	__________	+1.14	118531	134672	unknown	unknown; similar to Pmt1p
YER010C	__________	+1.64	142778	234077	unknown	unknown
YGR109C	CLB6______	+1.02	95047	96590	cell cycle	B-type cyclin; S phase
YHR123W	EPT1______	+1.05	1851804	1939032	phospholipid metabolism	sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferase
YJR155W	AAD10_____	+1.63	2107012	3434207	unknown	hypothetical aryl-alcohol dehydrogenase
YLR302C	__________	+1.87	105747	197818	unknown	unknown
YMR041C	__________	+1.48	185105	273759	unknown	unknown
YNL088W	TOP2______	+1.41	836076	1177768	DNA replication	DNA topoisomerase II
YOR206W	__________	-1.15	714823	621958	unknown	unknown
YPL185W	__________	+1.01	82538	83589	unknown	unknown
YBL006C	__________	+1.13	246825	279803	unknown	unknown
YBR269C	__________	+3.59	160079	574382	unknown	unknown
YDL008W	APC11_____	-2.25	165849	73846	mitosis	anaphase promoting complex subunit
YDR138W	HPR1______	+1.96	62000	121808	mitosis, recombination	related to topoisomerase
YDR507C	GIN4______	+2.02	369987	747920	cell cycle (growth inhibitor)	protein kinase
YFL006W	__________	+1.14	389864	442807	unknown	unknown
YGL200C	EMP24_____	-1.32	1337813	1015819	secretion	vesicle coat component
YIL099W	SGA1______	+1.10	49459	54292	sporulation	glucan 1,4-alpha-glucosidase
YJL201W	ECM25_____	+1.15	130621	149897	cell wall biogenesis	unknown
YKL197C	PEX1______	+1.96	56209	110105	peroxisome biogenesis	ATPase (putative)
YLR131C	ACE2______	-1.34	32769	24367	transcription	CUP1 regulator
YML008C	ERG6______	+1.09	2696443	2951277	sterol metabolism	S-adenosyl-methionine delta-24-sterol-c-methyltransferase
YMR233W	__________	-1.33	184528	139156	unknown	unknown; similar to Bud7p
YNL290W	RFC3______	+1.44	392255	563189	DNA replication	replication factor C 40 kD subunit
YOR030W	DFG16_____	+1.38	79893	109942	invasive growth	unknown
YPL008W	CHL1______	+1.12	82226	92238	mitosis	kinetochore protein, DEAH box family
YPR103W	PRE2______	+1.65	899472	1487770	protein degradation	20S proteasome subunit (beta5)
YBR081C	SPT7______	+1.13	91677	103927	chromatin structure	histone acetyltransferase complex subunit
YCR019W	MAK32_____	-1.28	123998	96969	dsRNA virus propagation	unknown
YDL198C	YHM1______	-1.54	632525	410329	transport	mitochondrial carrier family
YDR317W	__________	-1.43	152311	106852	unknown	unknown
YER020W	GPA2______	+1.98	169277	335754	signaling	G protein alpha subunit
YGL008C	PMA1______	-1.01	6049067	5964063	H+ homeostasis	plasma membrane H+-ATPase
YGR119C	NUP57_____	-1.00	354140	352745	nuclear protein targeting	nuclear pore protein
YHR134W	__________	-1.05	207845	197217	unknown	unknown
YJL008C	CCT8______	+1.04	992817	1028361	protein folding	cytoplasmic chaperonin complex
YKL007W	CAP1______	+1.04	470038	487542	cytoskeleton	actin capping protein subunit
YLL008W	DRS1______	-1.10	635225	578776	rRNA processing	RNA helicase
YLR313C	SPH1______	-1.34	44598	33382	bud site selection, bipolar	unknown; interacts with MAPKKs
YMR051C	__________	+2.04	6807461	13881931	unknown	unknown
YNL100W	__________	-1.01	397889	393498	unknown	unknown
YOL008W	__________	-1.01	178212	176711	unknown	unknown
YOR218C	__________	-1.05	305992	290162	unknown	unknown
YPL197C	__________	+1.14	462797	528693	unknown	unknown
YBL018C	POP8______	-1.67	164240	98429	tRNA processing	RNase P and RNase MRP subunit
YBR281C	__________	-1.11	93765	84708	unknown	unknown
YDL020C	RPN4______	+1.70	331589	564315	protein degradation, ubiquitin-mediated	26S proteasome subunit
YDR150W	NUM1______	-1.21	51582	42654	mitosis, nuclear migration	unknown
YDR519W	FKB2______	-1.32	488524	369167	protein folding	peptidyl-prolyl cis-trans isomerase
YFL015C	__________	-1.16	62563	54062	unknown	unknown
YGL212W	VAM7______	+1.39	50638	70497	vacuole biogenesis	unknown; regulator
YHL016C	DUR3______	+1.44	57427	82544	transport	urea permease
YIL110W	__________	-1.34	393829	293941	unknown	unknown
YJL213W	__________	+1.81	111075	201166	unknown	unknown; similar to Nocardia aryldialkylphosphatase
YKL209C	STE6______	-1.19	40908	34291	mating	a-factor exporter (ABC superfamily)
YLR143W	__________	+1.51	91607	138158	unknown	unknown; similar to Mmd1p
YNL302C	RPS19B____	-1.78	9963448	5607374	protein synthesis	ribosomal protein S19B
YOR042W	__________	+1.20	536516	644322	unknown	unknown
YPL020C	ULP1______	+1.22	226634	276146	protein degradation	Ubl (ubiquitin-like protein) - specific protease
YPR115W	__________	-1.51	114134	75441	unknown	unknown
YBR091C	MRS5______	-1.30	48159	37106	mitochondrial protein targeting	inner membrane carrier protein
YCR029C	RIM1______	-1.22	72340	59089
YDL210W	UGA4______	-1.11	67625	60688	transport	GABA-specific permease
YDR329C	PEX3______	+1.10	130136	143085	peroxisomal protein targeting	integral membrane protein
YER032W	FIR1______	-1.11	132005	119065	mRNA 3'-end processing	unknown
YGL020C	__________	-1.82	292395	160394	unknown	unknown
YGR131W	__________	-1.32	83696	63588	unknown	unknown
YHR144C	DCD1______	-1.24	235874	190803	pyrimidine metabolism	deoxycytidylate deaminase
YJL020C	__________	+1.00	93750	94072	unknown	unknown
YKL019W	RAM2______	+1.22	273146	333028	protein processing	protein farnesyltransferase, alpha subunit
YLL020C	__________	-1.07	66794	62444	unknown	unknown
YLR325C	RPL38_____	-2.57	5138255	1995469	protein synthesis	ribosomal protein L38
YNL112W	DBP2______	-2.17	6298915	2901855	mRNA decay	RNA helicase
YOL020W	TAT2______	-1.44	1006279	697421	transport	tryptophan permease
YOR230W	WTM1______	+1.77	1206488	2133339	meiosis	transcription factor
YPL209C	IPL1______	-1.28	126826	99376	mitosis, chromosome segregation	protein kinase
YBL030C	PET9______	+1.26	1518935	1909507	transport	mitochondrial ADP/ATP translocator
YBR293W	__________	+1.33	95827	127127	unknown	major facilitator superfamily
YDL032W	__________	+1.40	48087	67271	unknown	unknown
YDR162C	NBP2______	+1.30	146514	190201	unknown	interacts with Nap1p
YDR531W	__________	-1.13	271303	239083	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YFL025C	BST1______	+1.19	103376	123038	secretion	negative regulator of COPII vesicle formation
YGL224C	__________	-1.21	245568	202660	unknown	unknown
YHL028W	WSC4______	-1.48	106127	71908	cell wall integrity and stress response	unknown
YIL122W	__________	+1.46	68221	99923	unknown	unknown
YJR001W	__________	+1.46	338094	493958	unknown	major facilitator superfamily
YKL221W	__________	+1.93	47814	92384	unknown	unknown; similar to mammalian monocarboxylate
YLR155C	ASP3-1____	+3.33	568653	1896381	asparagine utilization	L-asparaginase II
YML029W	__________	+1.30	108219	141157	unknown	unknown
YMR257C	PET111____	+1.33	96820	128399	protein synthesis	translation activator of COX2
YNL314W	DAL82_____	+1.16	131283	152009	transcription	activator of allantoin catabolic genes
YOR054C	__________	+1.09	350912	382983	unknown	unknown
YPL032C	SVL3______	+1.37	125760	172179	unknown	unknown; styryl dye vacuolar localization
YPR127W	__________	+1.89	195141	368093	unknown	unknown; similar to auxin-induced protein PIR:S16390
YBR103W	SIF2______	+1.40	130638	182887	silencing (telomere)(putative)	unknown
YCR040W	MATALPHA1_	+1.51	58447	88282	transcription	alpha-specific gene activator
YDL222C	__________	+2.12	53501	113649	unknown	unknown; similar to Sur7p
YDR341C	__________	-1.04	1108779	1062079	protein synthesis	tRNA synthetase, arginine
YER043C	SAH1______	+1.61	2306693	3715862	methionine biosynthesis	S-adenosyl-L-homocysteine hydrolase
YGL032C	AGA2______	-1.10	95160	86631	mating	a-agglutinin binding subunit
YGR143W	SKN1______	+1.63	63402	103347	cell wall biogenesis	(1->6)-beta-glucan synthase subunit
YHR156C	__________	+1.76	75389	132865	unknown	unknown
YJL032W	__________	+1.91	132441	252757	unknown	unknown
YKL031W	__________	+1.27	35890	45613	unknown	unknown
YLL032C	__________	+1.46	159732	232861	unknown	unknown
YLR337C	VRP1______	+2.26	682673	1545530	cytoskeleton	verprolin
YMR074C	__________	-1.08	671520	624537	unknown	unknown
YNL124W	__________	-1.82	1170701	643375	unknown	unknown
YOL032W	__________	+1.75	123712	216905	unknown	unknown
YOR242C	SSP2______	-1.13	120760	106497	sporulation	unknown; similar to class II family of aminoacyl-tRNA synthetases
YPL221W	BOP1______	+4.12	376428	1550836	unknown	unknown; bypass of PAM1
YBL042C	FUI1______	+1.81	406075	734936	transport	uridine permease
YDL044C	MTF2______	+1.49	42250	63112	mRNA splicing, mitochondrial	unknown
YDR172W	SUP35_____	+1.07	1025530	1099762	protein synthesis	translation release factor
YDR543C	__________	+1.51	63591	96138	unknown	unknown; similar to other subtelomerically-encoded proteins
YFL035C	__________	+1.19	249265	297536
YGL235W	__________	+1.07	53895	57835	unknown	unknown
YHL039W	__________	-1.14	489221	427715	unknown	unknown
YIL134W	FLX1______	-1.28	150534	117421	transport	FAD mitochondrial carrier
YJR012C	__________	+1.29	110555	142400	unknown	unknown
YKR008W	RSC4______	-1.06	169815	160643	chromatin structure	chromatin remodeling complex subunit
YLR165C	__________	+1.01	92578	93815	unknown	unknown
YMR269W	__________	-1.13	206171	182454	unknown	unknown
YNL326C	__________	+1.35	183725	248052	unknown	unknown; similar to Akr1p and Ydr126p
YOR066W	__________	+1.17	168178	196551	unknown	unknown
YPL044C	__________	+1.34	216288	289923	unknown	unknown
YBR114W	RAD16_____	+1.88	123551	231941	DNA repair, nucleotide excision	NEF4 component
YCR052W	RSC6______	+1.40	249291	349751	chromatin structure	chromatin remodeling complex subunit
YDL234C	GYP7______	+5.42	126085	683499	vacuole inheritance	GTPase-activating protein for Ypt7p
YDR353W	TRR1______	-1.09	1569380	1437966	pyrimidine metabolism	thioredoxin reductase
YER053C	__________	+1.34	217364	291042	unknown	unknown; similar to C. elegans mitochondrial phosphate
YGL044C	RNA15_____	+1.11	237987	263174	mRNA 3'-end processing	cleavage/polyadenylation factor CF I component
YGR155W	CYS4______	-1.15	2798681	2434548	methionine biosynthesis	cystathionine beta-synthase
YHR168W	__________	-1.67	144324	86434	unknown	unknown
YJL045W	__________	+1.99	93093	185356	unknown	unknown; similar to succinate dehydrogenase flavoprotein
YKL042W	SPC42_____	+1.03	42075	43409	cytoskeleton	spindle pole body component
YLL044W	__________	-1.05	5546893	5264739	unknown	unknown
YLR349W	__________	+1.11	112353	124239	unknown	unknown
YNL136W	__________	-1.01	230111	227723	unknown	unknown; similar to mature-parasite-infected
YOL044W	PEX15_____	+1.75	109672	191453	peroxisome biogenesis	integral membrane protein
YOR254C	SEC63_____	-1.13	1364005	1210482	secretion	ER protein translocation subcomplex subunit
YPL233W	__________	+1.40	206077	287513	unknown	unknown
YBL054W	__________	+1.20	91047	109339	unknown	unknown
YDL056W	MBP1______	+1.31	135316	177628	cell cycle	transcription factor
YDR183W	PLP1______	+1.03	117463	121558	unknown	unknown; similar to phosducin
YFL047W	__________	+2.01	103581	208171	unknown	unknown; similar to Rga2p
YGL247W	__________	+1.82	96155	175080	unknown	unknown
YHL050C	__________	+2.41	3092286	7463218	unknown	unknown; similar to other subtelomerically-encoded proteins
YIL146C	ECM37_____	+2.43	85038	206510	cell wall biogenesis	unknown
YJR024C	__________	+1.23	455988	560966	unknown	unknown
YKR020W	__________	+1.50	103430	155478	unknown	unknown
YLR177W	__________	+2.08	352551	734867	unknown	unknown
YML048W	GSF2______	+1.49	191096	285046	glucose repression	unknown
YMR281W	GPI12_____	+1.47	179291	264074	protein processing (putative)	N-acetylglucosaminylphosphatidylinositol de-N-acetylase
YNL338W	__________	+1.39	148700	206940	unknown	unknown
YOR078W	__________	-1.08	909326	843273	unknown	unknown
YPL056C	__________	+1.49	95308	142146	unknown	unknown
YPR149W	NCE102____	-1.24	561315	454353	secretion, non-classical	unknown
YBR126C	TPS1______	+2.24	329928	738941	trehalose metabolism	trehalose-6-phosphate synthas
YCR064C	__________	+1.15	68060	78182	unknown	unknown
YDL246C	__________	+1.87	99631	186385	unknown	unknown; similar to Sor1p (SOR1 and YDL246C code for nearly
YDR365C	__________	-1.47	676785	459210	unknown	unknown
YER063W	THO1______	-1.10	353729	321840	transcription (putative)	unknown
YGL056C	SDS23_____	+1.14	403315	457888	unknown	unknown; similar to S. pombe sds23
YGR163W	GTR2______	+1.12	294537	328790	signaling (putative)	small GTPase (putative)
YHR180W	__________	+1.53	103765	158609	unknown	unknown
YJL057C	IKS1______	+1.82	135677	247088	signaling (putative)	protein kinase
YKL054C	VID31_____	-1.19	528541	445857	vacuolar protein targeting (putative)	unknown
YLL056C	__________	+1.24	520994	646853	unknown	unknown; similar to Y. pseudotuberculosis CDP-3,
YLR361C	__________	+1.45	137947	199366	unknown	unknown
YMR096W	SNZ1______	+2.80	335580	937967	unknown	unknown; induced in stationary phase
YNL148C	ALF1______	+1.34	67259	89887	protein folding	alpha-tubulin foldin
YOL054W	__________	+1.87	210731	393291	unknown	unknown
YOR266W	PNT1______	+1.04	258952	268286	pentamidine resistance	unknown
YPL245W	__________	+1.01	290776	294215	unknown	unknown
YBL066C	SEF1______	+1.72	51339	88552	transcription	(putative) transcription factor
YDL068W	__________	-1.01	77999	77330	unknown	unknown
YDR195W	REF2______	+1.07	109988	117170	mRNA 3'-end processing	unknown
YFL059W	SNZ3______	+1.44	218903	315965	unknown	unknown; induced in stationary phase
YGL259W	YPS5______	+1.31	102996	134991	protein degradation	GPI-anchored aspartic protease
YHR010W	RPL27A____	-1.87	13001412	6952946	protein synthesis	ribosomal protein L27A

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YIL157C	__________	+1.20	362466	434328	unknown	unknown
YJR035W	RAD26_____	+1.68	188841	318167	DNA repair	putative helicase
YKR032W	__________	+1.36	68115	92899	unknown	unknown
YLR189C	UGT51_____	+1.38	87626	120762	sterol metabolism	UDP-glycosyltransferases
YML059C	__________	+1.48	298269	442637	unknown	unknown
YNR011C	PRP2______	+1.44	270292	388250	mRNA splicing	RNA helicase, putative
YOR090C	PTC5______	+1.32	199326	263601	unknown	protein phosphatase type 2C
YPL066W	__________	+1.41	479055	675583	unknown	unknown
YBR138C	HDR1______	+1.14	104867	119516	meiosis	unknown
YCR075C	ERS1______	-1.02	76536	75095	secretion (putative)	unknown; suppresses erd1 mutation
YDR010C	__________	+1.01	51791	52492	unknown	unknown
YDR375C	BCS1______	-1.31	201757	153868	respiration	cyt. c iron-sulfur subunit expression
YER072W	NRF1______	-3.45	2411200	699527	signaling, polarized growth (putative)	negative regulator of Cdc42p
YGL068W	__________	-1.53	649270	422996	unknown	unknown; similar to ribosomal proteins
YGR175C	ERG1______	+1.17	2335328	2728382	sterol metabolism	squalene monooxygenase
YHR192W	__________	-1.08	366061	338703	unknown	unknown
YJL069C	__________	+1.51	391436	589823	unknown	unknown
YKL066W	__________	-1.18	86165	73129	unknown	unknown
YLR001C	__________	+1.27	530708	673041	unknown	unknown
YLR373C	VID22_____	+1.43	123611	176348	vacolar protein targeting (putative)	unknown
YMR108W	ILV2______	+1.13	1927558	2173490	isoleucine and valine biosynthesis	acetolactate synthase
YNL160W	YGP1______	+1.18	2081157	2449294	diauxic shift	unknown; response to nutrient limitation
YOL066C	RIB2______	+1.08	198199	213076	riboflavin biosynthesis	DRAP deaminase
YOR278W	HEM4______	+1.13	205222	231546	heme biosynthesis	uroporphyrinogen III synthase
YPL256C	CLN2______	+1.43	847487	1210903	cell cycle	G1/S cyclin
YMR323W	__________	+1.27	108099	137563	unknown	unknown; similar to enolases (phosphopyruvate hydratase)
YBL078C	AUT7______	+3.01	86732	260720	autophagy	microtubule-associated protein (putative)
YDL080C	THI3______	+1.26	75425	95198	thiamine metabolism	alpha-ketoisocaproate carboxylase
YDR207C	UME6______	+1.06	131546	139276	meiosis	transcription factor
YFR003C	__________	+1.34	175905	235180	unknown	unknown
YGR008C	STF2______	+1.70	209625	356508	ATP synthesis	ATPase stabilizing factor
YIL169C	__________	+1.98	1045961	2067162	unknown	unknown
YJR047C	ANB1______	+1.19	6245132	7461863	protein synthesis	translation initiation factor eIF5A
YKR044W	__________	+1.31	366414	478295	unknown	unknown
YLR201C	__________	+1.41	174707	246782	unknown	unknown
YML071C	__________	+2.50	170459	426594	unknown	unknown
YMR303C	ADH2______	+1.02	15224444	15474567	glycolysis	alcohol dehydrogenase II
YNR023W	SNF12_____	+1.21	249433	301445	transcription	component of SWI/SNF global activator complex
YOR102W	__________	+1.27	395671	502715	unknown	unknown
YPL078C	ATP4______	+1.84	1277735	2351788	ATP synthesis	ATPase; F0-ATP synthase subunit 4
YPR169W	__________	+1.02	1416648	1441315	unknown	unknown
YBR150C	TBS1______	+1.56	84773	132475	drug resistance (putative)	unknown; similar to transcription factors, has Zn[2]-Cys[6]
YDR022C	CIS1______	+1.53	47655	73022	microtubule assembly	cik1 suppressor
YDR387C	__________	+1.84	87597	160857	unknown	unknown; similar to Itr1p and Itr2p
YER084W	__________	-1.09	46073	42329	unknown	unknown
YGL080W	__________	+2.20	80359	176507	unknown	unknown
YGR187C	HGH1______	-1.40	701504	502654	unknown	unknown; similar to human Hmg1p and Hmg2p
YHR204W	__________	+1.63	202425	330659	unknown	unknown; similar to alpha-mannosidase and other glycosyl
YJL081C	ARP4______	+1.50	393760	591229	cytoskeleton	actin-related protein
YKL078W	__________	-1.04	168386	161538	unknown	putative RNA helicase
YLR013W	GAT3______	+1.21	57183	69404	transcription (putative)	DNA binding protein, GATA family
YLR385C	__________	-1.07	44181	41249	unknown	unknown
YNL172W	APC1______	-1.49	68940	46298	mitosis	anaphase-promoting complex subunit
YOL078W	__________	+1.05	98754	103342	unknown	unknown
YOR290C	SNF2______	+1.35	530735	718500	transcription	component of SWI/SNF global activator complex
YPL266W	DIM1______	-1.79	952485	530977	rRNA processing, 18S	dimethyladenosine transferase
YBL090W	MRP21_____	-1.09	203010	185943	protein synthesis	ribosomal protein, mitochondrial
YDL092W	SRP14_____	-1.47	325274	221259	secretion	signal recognition particle subunit
YDR215C	__________	+1.11	60138	67047	unknown	unknown
YFR015C	GSY1______	+1.27	78626	99959	glycogen metabolism	glycogen synthase
YGR020C	VMA7______	-1.19	608288	510163	vacuolar acidification	vacuolar H+-ATPase V1 domain 14 kDa subunit
YHR033W	__________	+1.27	133767	170174	unknown	unknown; similar to Pro1p
YIR003W	__________	+1.61	243609	391703	unknown	unknown; similar to E. coli and Bacillus subtilis MinD, has
YJR059W	PTK2______	+1.68	220165	370026	polyamine transport	ser/thr protein kinase
YKR056W	RNC1______	-1.05	544819	520010	unknown	endo-exonuclease
YLR213C	CRR1______	+1.77	116638	205994	unknown	unknown; sporulation specific, related to Crh1p
YML083C	__________	+1.01	101483	102443	unknown	unknown
YMR313C	__________	+1.17	378169	441341	unknown	unknown
YNR035C	ARC35_____	+1.35	697247	944537	cytoskeleton	cortical actin patch integrity
YOR114W	__________	-1.88	442060	235678	unknown	unknown
YPL090C	RPS6A_____	-1.45	15590110	10773156	protein synthesis	ribosomal protein S6A
YPR181C	SEC23_____	+1.18	449258	532342	secretion	vesicle coat component
YBR162C	__________	+1.74	2380849	4135797	unknown	unknown; similar to Aga1p
YCR098C	GIT1______	-2.32	311431	134364	unknown	unknown; similar to phosphate transporter
YDR034C	LYS14_____	+1.52	195298	296951	lysine biosynthesis	transcription factor
YDR399W	HPT1______	-2.67	1138744	425837	purine biosynthesis	hypoxanthine guanine phosphoribosyl transferase
YER094C	PUP3______	+1.40	581146	811493	protein degradation	20S proteasome subunit (beta3
YGL092W	NUP145____	+1.29	236189	305369	nuclear protein targeting	nuclear pore protein
YGR199W	PMT6______	+1.21	225638	272789	protein glycosylation	putative O-mannosyltransferase
YJL093C	TOK1______	+1.41	191764	271034	transport	outward-rectifier potassium channel
YKL090W	__________	+1.13	156310	177126	unknown	unknown
YLR025W	SNF7______	+1.21	307058	370383	glucose derepression	unknown
YLR397C	AFG2______	+1.16	195751	227137	unknown	(putative) AAA ATPase
YMR131C	RSA2______	-1.04	834959	802222	ribosome biogenesis	unknown
YNL184C	__________	+1.00	121841	122334	unknown	unknown
YOL090W	MSH2______	+1.51	539650	814753	DNA repair	MutS homolog; mismatch repair
YOR301W	RAX1______	+1.90	133347	252770	cell polarity (putative)	unknown
YPL278C	__________	+1.20	185262	222835	unknown	unknown
YAL010C	MDM10_____	+1.08	86781	93445	mitochondrial biogenesis	(putative) component of actin binding protein complex
YBR174C	__________	-1.24	71633	57989	unknown	unknown
YCRX04W	__________	-1.22	231559	189330
YDR045C	RPC11_____	-1.76	389589	221887	transcription	RNA polymerase III subunit C11
YDR412W	__________	-1.73	408912	236981	unknown	unknown
YER107C	GLE2______	-1.24	337589	273177	nuclear protein targeting	nuclear pore protein
YGL105W	ARC1______	-1.02	1004192	981029	tRNA aminoacylation	G4 nucleic acid binding protein
YGR212W	__________	+1.20	84525	101682	unknown	unknown
YIL009W	FAA3______	-1.39	404876	292303	fatty acid metabolism	acyl CoA synthase
YJL106W	IME2______	+1.78	59610	106357	signaling, meiosis pathway	serine/threonine protein kinase
YKL102C	__________	+1.22	48252	58767	unknown	unknown; similar to potato lipoxygenase
YLR036C	__________	-2.07	98805	47695	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YLR410W	VIP1______	+1.05	52042	54667	unknown	unknown
YNL197C	WHI3______	+1.30	101700	132358	cell size	unknown
YOL103W	ITR2______	+1.24	343126	426861	transport	inositol permease
YOR313C	SPS4______	-1.08	108592	100484	sporulation	putative cell wall component
YPR008W	__________	+1.34	95308	127605	unknown	unknown; similar to Cup2p and Candida albicans
YBL101W	__________	-1.24	10432617	8430025	unknown	unknown
YCL008C	STP22_____	+1.49	138517	205984	vacuolar protein targeting	unknown; similar to Tsg101 tumor susceptibility gene
YDL105W	QRI2______	-1.33	89888	67590	unknown	unknown
YDR228C	PCF11_____	-1.10	386613	350816	mRNA 3'-end processing	cleavage/polyadenylation factor CF I component
YEL009C	GCN4______	+1.23	4943106	6065055	amino acid, purine biosynthesis	transcription factor
YFR028C	CDC14_____	-1.87	434523	232230	mitosis	protein phosphatase
YGR031W	__________	+1.18	128022	150602	unknown	unknown
YHR045W	__________	-1.21	251353	208140	unknown	unknown
YIR016W	__________	+1.30	164845	213554	unknown	unknown
YJR072C	__________	+1.19	454062	541167	unknown	unknown
YKR069W	MET1______	+1.32	103706	136894	methionine biosynthesis	siroheme synthase
YLR226W	BUR2______	+1.15	111046	128048	unknown	unknown
YML095C	RAD10_____	-1.18	144081	122148	DNA repair	ssDNA endonuclease
YNL009W	IDP3______	+1.66	75535	125272	TCA cycle	isocitrate dehydrogenase
YNR048W	__________	+1.38	159728	220671	unknown	unknown
YOR127W	RGA1______	+1.99	473515	940243	bud site selection	putative GTPase-activating protein (GAP) for Cdc42p or Rho1p
YPL103C	__________	+1.31	134338	175699	unknown	unknown
YPR194C	__________	-1.08	303479	280113	unknown	sexual differentiation protein family
YAL022C	FUN26_____	-1.16	150924	130508	unknown	unknown
YBR186W	PCH2______	-1.19	53830	45121	meiosis, checkpoint	unknown
YCRX16C	__________	-2.14	751091	350790
YDR057W	__________	-1.12	150868	134270	unknown	unknown
YDR424C	DYN2______	-1.30	210855	162735	cytoskeleton	dynein light chain
YER119C	__________	+1.29	133744	172403	unknown	unknown
YGL117W	__________	+1.20	155303	186626	unknown	unknown
YGR224W	AZR1______	+1.22	61435	75033	drug resistance (putative)	unknown; major facilitator superfamily
YIL020C	HIS6______	-1.80	252925	140490	histidine biosynthesis	Phosphoribosyl imidazolecarboxamide isomerase
YJL118W	__________	-2.06	54053	26178	unknown	unknown
YKL114C	APN1______	-1.25	382969	305901	DNA repair	apurinic/apyrimidinic endonuclease
YLR048W	RPS0B_____	-1.49	7181508	4819270	protein synthesis	ribosomal protein S0B
YLR420W	URA4______	-1.19	543449	455429	pyrimidine biosynthesis	dihydrooratase
YMR154C	RIM13_____	+1.04	142884	148056	sporulation	proteolytic processing of Rim1p
YNL209W	SSB2______	+1.25	10935083	13619771	translation	cytosolic HSP70
YOL113W	SKM1______	+2.18	191991	418040	unknown	protein kinase
YOR325W	__________	+1.32	92617	122296	unknown	unknown
YPR020W	ATP20_____	+1.52	470794	716977	ATP synthesis	mitochondrial ATP synthase subunit
YBL113C	__________	+1.84	2603237	4787922	unknown	unknown
YCL021W	__________	-1.87	931194	498924
YDL117W	CYK3______	+1.09	173465	189224	cytokinesis (putative)	unknown
YEL020C	__________	-1.04	143041	137436	unknown	unknown; similar to oxalyl-CoA decarboxylase from
YFR037C	RSC8______	-1.09	665291	610884	chromatin structure	chromatin remodeling complex subunit
YHR056C	__________	+1.27	312241	398035	unknown	putative transcriptional regulator
YIR025W	__________	-1.18	134969	114618	unknown	unknown
YJR085C	__________	+1.37	597364	817252	unknown	unknown
YKR081C	__________	-3.12	1162531	372429	unknown	unknown
YLR236C	__________	+1.00	58309	58347	unknown	unknown
YML105C	SEC65_____	-1.42	649737	458421	secretion	signal recognition particle subunit
YNL021W	HDA1______	+1.23	118405	145354	chromatin structure	histone deacetylase
YNR060W	FRE4______	+1.14	95883	109635	unknown	unknown; similar to ferric reductases Fre1p and Fre2p
YOR139C	__________	+1.32	60727	80362	unknown	unknown
YPL115C	BEM3______	+1.23	306545	378431	bud emergence	GTPase-activating protein for Cdc42p
YAL033W	POP5______	-1.53	133936	87655	tRNA processing	RNase P and RNase MRP subunit
YBR198C	TAF90_____	+1.08	184473	199651	transcription	TFIID 90 kD subunit
YDR069C	DOA4______	+1.85	147051	271480	protein degradation, ubiquitin-mediated	ubiquitin-specific protease
YDR436W	PPZ2______	+1.69	94076	159177	stress response	ser/thr phosphatase
YER130C	__________	+2.75	166793	458603	unknown	unknown
YGL129C	__________	-1.09	39289	36004	unknown	unknown; similar to crayfish 1,3-beta-D-glucan-binding
YGR236C	__________	+1.63	92593	150475	unknown	unknown
YIL032C	__________	+2.10	47953	100693	unknown	unknown
YJL130C	URA2______	+1.70	7559555	12858709	pyrimidine biosynthesis	carbamoyl-phophate synthetase, aspartate transcarbamylase, and glutamine amidotransferase
YKL126W	YPK1______	+2.13	231872	494167	unknown	protein kinase
YLR060W	FRS1______	+2.05	475654	977048	protein synthesis	tRNA synthetase, phenylalanyl, subunit
YLR430W	SEN1______	+1.53	509649	779865	tRNA splicing	RNA helicase, putative
YMR165C	SMP2______	+1.18	51996	61385	respiration; plasmid maintenance	unknown
YNL221C	POP1______	+1.34	467898	624686	rRNA and tRNA processing	RNase P and RNase MRP subunit
YOL125W	__________	+1.05	358426	375204	unknown	unknown
YOR337W	TEA1______	+1.91	114120	218413	transcription	Ty1 enhancer activator
YPR032W	SRO7______	+1.17	61105	71762	signaling (putative)	suppresses rho3 mutant
YBR012C	__________	+1.23	33758	41401	unknown	unknown
YCL033C	__________	+1.64	224791	369096	unknown	unknown; similar to Neisseria pilin
YDL129W	__________	+1.30	63609	82491	unknown	unknown
YDR252W	BTT1______	-1.06	61234	57843	transcription	negative regulator of RNA polymerase II
YEL032W	MCM3______	+1.44	43791	63221	DNA replication	MCM initiator complex
YFR049W	YMR31_____	+1.40	228016	319261	protein synthesis	ribosomal protein, mitochondrial
YGR050C	__________	-1.03	60045	58417	unknown	unknown
YHR066W	SSF1______	+1.05	531875	559886	mating (putative)	unknown
YIR037W	HYR1______	+1.02	498260	506160	oxidative stress response	glutathione peroxidase
YJR096W	__________	+1.58	99229	156866	unknown	unknown; similar to aldolase reductase
YKR093W	PTR2______	-1.30	875842	671819	transport	small peptide permease
YLR248W	RCK2______	+1.91	233000	445710	unknown	Ca/calmodulin-dependent protein kinase
YNL033W	__________	+1.14	66033	75276	unknown	unknown
YNR072W	HXT17_____	+1.69	95696	161873	transport	hexose permease
YOR149C	SMP3______	+1.25	126645	158809	plasmid maintenance	integral membrane, protein kinase C pathway protein
YPL127C	HHO1______	+1.21	630413	764106	chromatin structure	histone H1
YBR210W	__________	+1.02	130258	132932	unknown	unknown
YDR081C	PDC2______	+1.68	102526	172010	glycolysis	regulator of pyruvate decarboxylase genes
YDR448W	ADA2______	+1.66	59978	99497	chromatin structure	histone acetyltransferase complex subunit
YER140W	__________	+1.39	101323	141017	unknown	unknown
YGL141W	HUL5______	-1.38	38677	27965	protein degradation, ubiquitin mediated	ubiquitin-protein ligase (E3)
YGR248W	SOL4______	+1.18	63017	74651	unknown	unknown; similar to Sol3p
YIL044C	AGE2______	-1.05	314887	298620	secretion	GTPase activating protein for ARFs
YJL142C	__________	+1.66	154290	256373	unknown	unknown
YKL138C	MRPL31____	-1.30	189871	145940	protein synthesis	ribosomal protein, mitochondrial L31
YLR072W	__________	+1.38	54122	74640	unknown	unknown
YLR442C	SIR3______	+1.43	270352	385620	silencing	nuclear protein, reulator of silencing at HML, HMR, telomeres

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YNL233W	BNI4______	+1.17	259784	303379	cytokinesis	may link chitin synthase to septins
YOL137W	__________	+1.34	211249	282201	unknown	major facilitator superfamily
YOR347C	PYK2______	-1.28	249739	194774	glycolysis	pyruvate kinase
YPR044C	__________	-1.44	12977450	9013147	unknown	unknown
YBR022W	__________	+1.34	137911	185268	unknown	unknown
YCL045C	__________	-1.16	385630	333170	unknown	unknown
YDL139C	SCM3______	+1.43	87445	125374	mitosis, chromosome segregation (putative)	unknown
YEL044W	__________	+1.41	107267	150822	unknown	unknown
YGR062C	COX18_____	+1.24	107932	134154	respiration	required for activity of mitochondrial cytochrome oxidase
YHR077C	NMD2______	+1.11	287275	319477	mRNA decay, nonsense-mediated	Nam7p/Upf1p-interacting protein
YJR108W	ABM1______	+1.06	56164	59473	cytoskeleton (putative)	unknown
YKR105C	__________	+1.30	103778	135293	unknown	major facilitator superfamily
YLR257W	__________	+1.94	908582	1766876	unknown	unknown
YML128C	__________	+1.97	158400	311435	unknown	unknown
YNL043C	__________	+1.55	495124	765067	unknown	unknown
YOR161C	__________	+1.21	145594	176133	unknown	unknown
YPL139C	UME1______	+1.04	187903	195741	meiosis	transcription factor
YBR222C	FAT2______	+2.50	92827	232463	transport	peroxisomal (putative) fatty acid transporter
YDR093W	__________	+1.26	1914666	2416991	unknown	unknown; similar to members of Drs2p family of P-type
YDR460W	TFB3______	+1.14	154641	176172	transcription	TFIIH 38 kD subunit
YER150W	SPI1______	+2.09	106973	223668	unknown	unknown; similar to Sed1p; induced in stationary phase
YGL153W	PEX14_____	+1.06	93565	99503	peroxisomal protein targeting	peroxisomal import machinery component
YGR260W	TNA1______	+1.10	758044	831278	transport	nicotinic acid permease
YIL056W	__________	+1.57	242407	380639	unknown	unknown
YJL154C	VPS35_____	+1.55	212662	330048	vacuolar protein targeting	peripheral membrane protein
YKL150W	MCR1______	+1.71	487307	833589	electron carrier	cytochrome-b5 reductase
YLR084C	RAX2______	+1.44	231796	334404	cell polarity (putative)	unknown
YLR454W	__________	+2.22	1955958	4334910	unknown	unknown
YMR187C	__________	+1.42	141626	200607	unknown	unknown
YNL245C	__________	+1.27	258947	329345	unknown	unknown
YOL149W	DCP1______	-1.31	457598	349297	mRNA decay	decapping enzyme
YOR359W	__________	+1.11	85550	95097	unknown	unknown
YPR056W	TFB4______	-1.06	224722	211970	transcription	TFIIH 37 kD subunit
YBR034C	HMT1______	-1.38	936976	679622	protein processing	arginine methyltransferase
YCL057W	PRD1______	+1.96	279991	547927	protein degradation	proteinase yscD
YDL151C	__________	+1.13	201538	227597	unknown	unknown
YDR272W	GLO2______	+1.12	360525	403186	methylglyoxal resistance	glyoxalase II
YEL056W	HAT2______	-1.03	244265	236138	chromatin structure	histone acetyltransferase complex subunit
YGR074W	SMD1______	-1.12	188353	167890	mRNA splicing	U6 snRNP protein
YHR088W	RPF1______	-1.24	552619	446699	unknown	unknown
YJR120W	__________	+3.14	82180	258014	unknown	unknown
YLR268W	SEC22_____	-1.31	570687	435872	secretion	ER-to-Golgi v-SNARE
YMR007W	__________	+1.64	144220	236149	unknown	unknown
YOR173W	__________	+1.04	72152	74857	unknown	unknown
YPL151C	PRP46_____	+1.23	269362	331903	mRNA splicing	unknown
YAL067C	SEO1______	+1.20	47037	56386	drug resistance	suppressor of sulfoxyde ethionine
YBR234C	ARC40_____	+1.14	50386	57275	cytoskeleton	Arp2/3 complex subunit
YDR103W	STE5______	+1.41	122058	172646	signaling, pheromone pathway	scaffold protein for MAP kinase cascade
YDR472W	TRS31_____	+1.07	324725	349035	secretion (putative)	transport protein particle (TRAPP) subunit, 31 kD
YER160C	__________	+1.09	133726	145732	unknown	unknown
YGL165C	__________	+1.88	168978	318363	unknown	unknown
YGR272C	__________	-1.61	539255	334498	unknown	unknown
YIL067C	__________	+2.34	145537	340899	unknown	unknown
YJL166W	QCR8______	+1.68	1045580	1754661	oxidative phosphorylation	ubiquinol--cytochrome-c reductase subunit VIII
YKL162C	__________	+1.41	80920	114387	unknown	unknown
YLR096W	KIN2______	+1.26	418916	525935	unknown	protein kinase
YLR466W	YRF1-4____	+2.42	4686790	11360408	unknown	Y' helicase (subtelomerically-encoded)
YMR198W	CIK1______	+1.14	129431	147815	cytoskeleton	spindle pole body associated protein
YNL257C	SIP3______	+1.15	68539	78595	glucose derepression	(putative) transcriptional activator
YOL161C	__________	+2.37	267557	634725	unknown	unknown; similar to PAU1 family
YOR371C	__________	+1.75	119877	210218	unknown	unknown
YPR068C	HOS1______	+1.17	56666	66237	unknown	unknown; similar to Hda1p, Rpd3p, Hos2p, and Hos3p
YBR046C	ZTA1______	+1.30	57156	74179	unknown	putative quinone oxidoreductase
YCL069W	__________	+1.06	62680	66393	unknown	major facilitator superfamily
YDL163W	__________	+1.14	41049	46869	unknown	unknown
YDR284C	DPP1______	+1.28	193741	247979	phospholipid metabolism	diacylglycerol pyrophosphate phosphatase
YEL067C	__________	+1.21	96418	116348	unknown	unknown
YGR086C	__________	+1.23	2719077	3340895	unknown	unknown
YHR100C	__________	-1.13	362682	320550	unknown	unknown
YJR132W	NMD5______	+1.85	324172	599301	unknown	Nam7p/Upf1p-interacting protein
YLR280C	__________	+1.49	40121	59794	unknown	unknown
YMR019W	STB4______	+1.11	116964	129549	transcription	Sin3-binding protein
YNL065W	__________	-1.19	387819	324747	unknown	major facilitator superfamily
YOR185C	GSP2______	-1.18	1225506	1042085	nuclear organization	GTPase; ran homolog
YPL163C	SVS1______	+5.02	696073	3496847	vanadate resistance	unknown
YAR019C	CDC15_____	+1.25	114386	143317	cell cycle	protein kinase
YBR246W	__________	+1.07	159717	171545	unknown	unknown
YDR115W	__________	-1.32	155859	117928	unknown	unknown; similar to prokaryotic L34 ribosomal protein
YDR484W	SAC2______	+1.26	130943	164834	cytoskeleton	suppressor of actin mutation
YER171W	RAD3______	-1.04	204376	196970	transcription; DNA repair	TFIIH subunit
YGL177W	__________	+1.46	56418	82313	unknown	unknown
YGR284C	ERV29_____	+1.38	567845	785120	secretion (putative)	unknown; transport vesicle protein
YIL077C	__________	-1.05	305101	289796	unknown	unknown
YJL178C	__________	+1.51	753265	1140739	unknown	unknown
YKL174C	__________	+1.63	203578	332357	unknown	unknown; similar to Hnm1p and other permeases
YLR108C	__________	+1.29	77897	100107	unknown	unknown
YMR210W	__________	+1.47	845453	1240202	unknown	unknown
YNL269W	__________	+2.85	137363	391681	unknown	unknown
YOR007C	SGT2______	+1.10	2642836	2914021	unknown	unknown
YOR383C	__________	+1.45	317256	460254	unknown	unknown
YPR080W	TEF1______	+1.02	15733592	16071660	protein synthesis	translation elongation factor EF-1 alph
YBR058C	UBP14_____	-1.10	253615	230759	protein degradation, ubiquitin-mediated	ubiquitin-specific protease
YCLX08C	__________	-1.09	98710	90657
YDL175C	__________	+1.38	128634	177994	unknown	unknown
YDR296W	MHR1______	+1.15	140811	161272	recombination, mitochondrial	unknown
YER001W	MNN1______	+1.31	430986	565755	protein glycosylation	alpha-1,3-mannosyltransferase
YGR098C	ESP1______	-1.18	58197	49438	cytoskeleton	spindle pole body duplication
YHR112C	__________	+2.05	339957	696035	unknown	unknown; similar to cystathionine gamma-synthase Str2p
YJR144W	MGM101____	+1.29	668249	860821	mitochondrial genome maintenance	(putative) nucleic acid interactor
YLR291C	GCD7______	-1.08	512207	472679	protein synthesis	translation initiation factor eIF2b subunit

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YMR031C	__________	+1.15	185886	213311	unknown	unknown
YNL077W	__________	+1.34	165768	221881	unknown	unknown; similar to E. coli DnaJ and other DnaJ-like proteins
YOR195W	SLK19_____	+1.23	567899	695724	mitosis	unknown; synthetic lethal with kar3
YPL175W	SPT14_____	+1.32	223408	295269	protein processing	N-acetylglucosaminyltransferase (GPI anchor synthesis)
YAR042W	SWH1______	+1.13	49822	56381	unknown	unknown; similar to mammalian oxysterol-binding protein
YBR258C	__________	+1.03	106309	109684	unknown	unknown
YDR127W	ARO1______	+1.05	1288869	1348030	aromatic amino acid biosynthesis	pentafunctional enzyme
YDR496C	__________	-1.47	743874	505123	unknown	unknown
YER182W	__________	-1.22	252079	205963	unknown	unknown
YGL189C	RPS26A____	-1.47	12818505	8739436	protein synthesis	ribosomal protein S26A
YGR296W	YRF1-3____	-3.38	679628	201243	unknown	Y' helicase (subtelomerically-encoded)
YIL088C	__________	+1.01	350748	355156	unknown	unknown; similar to members of the major facilitator
YJL190C	RPS22A____	-1.97	12259095	6231927	protein synthesis	ribosomal protein S22A
YKL186C	MTR2______	-1.06	718478	677712	mRNA export	unknown
YLR120C	YPS1______	+3.74	161520	604301	protein processing	GPI-anchored aspartic protease
YMR222C	__________	+1.40	183235	255828	unknown	unknown; similar to S. pombe DFR1, dihydrofolate reductase
YNL281W	HCH1______	+1.36	789763	1071529	stress response (putative)	unknown; overexpression suppresses hsp82 mutation
YOR019W	__________	+1.47	126934	186565	unknown	unknown
YPR092W	__________	+1.20	79462	95184	unknown	unknown
YBR070C	__________	+1.28	137302	175541	stress response	osmotolerance protein (putative)
YCR008W	SAT4______	+1.25	189621	236803	salt tolerance	protein kinase
YDL187C	__________	-1.03	57938	56243	unknown	unknown
YDR308C	SRB7______	-1.30	125090	96437	transcription	RNA polymerase II mediator subunit
YER011W	TIR1______	+2.13	267334	569255	stress response (putative)	cell wall protein
YHR124W	NDT80_____	+1.60	355332	568362	meiosis	transcription factor
YJR156C	THI11_____	+2.35	183247	430251	pyrimidine biosynthesis	thiamine regulated gene
YLR303W	MET17_____	+1.54	1606764	2476167	methionine biosynthesis	O-acetylhomoserine sulfhydrylase
YMR042W	ARG80_____	+1.25	155824	194182	arginine metabolism	transcription factor
YNL089C	__________	+1.11	108309	120167	unknown	unknown
YOR207C	RET1______	+1.23	60678	74383	transcription	RNA polymerase III 130 kD subunit
YPL186C	__________	+1.48	72494	106952	unknown	unknown
YBL007C	SLA1______	+1.26	184689	233130	cytoskeleton	cortical actin assembly
YBR270C	__________	+1.22	74393	91058	unknown	unknown
YDL009C	__________	+1.90	139812	265914	unknown	unknown
YDR139C	RUB1______	-1.47	245626	166916	protein degradation	ubiquitin-like protein
YDR508C	GNP1______	+1.20	256046	306222	transport	glutamine permease
YFL007W	BLM3______	+1.84	219549	404829	drug resustance	unknown; major facilitator superfamily
YGL201C	MCM6______	-1.09	36730	33585	DNA replication	MCM initiator complex
YHL007C	STE20_____	+1.18	177463	209743	signaling, pheromone and pseudohyphal growth pathways	serine-threonine protein kinase
YJL202C	__________	+1.04	117986	122920	unknown	unknown
YKL198C	PTK1______	+1.55	72059	112009	polyamine transport	ser/thr protein kinase
YLR132C	__________	+1.04	45117	46852	unknown	unknown
YMR234W	RNH1______	+1.25	157719	197568	DNA replication (putative)	ribonuclease H
YNL291C	MID1______	+1.03	190172	195569	transport	Ca(2+) channel component
YOR031W	CRS5______	+1.36	154028	208913	Cu2+ ion homeostasis	metallothionein-like protein
YPL009C	__________	+1.42	55628	79184	unknown	unknown
YPR104C	FHL1______	+1.24	259021	321345	transcription	transcriptional activator
YBR082C	UBC4______	-1.04	971376	934453	protein degradation, ubiquitin-mediated	E2 ub.-conjugating enzyme
YCR020C	MAK31_____	-1.39	173240	124829	dsRNA virus propagation	unknown
YDL199C	__________	+1.11	79563	88356	unknown	unknown; similar to members of the sugar permease family
YDR318W	MCM21_____	+1.04	112439	117088	mitosis, chromosome segregation	unknown
YER021W	RPN3______	+1.16	635021	736349	protein degradation	26S proteasome regulatory subunit
YGL009C	LEU1______	-4.41	626254	141943	leucine biosynthesis	3-isopropylmalate dehydratase
YGR120C	SEC35_____	-1.27	203462	160663	secretion	peripheral membrane protein required for ER to Golgi vesicle docking
YHR135C	YCK1______	+1.32	416314	549331	unknown	protein kinase
YJL009W	__________	-1.40	814872	581036	unknown	unknown
YKL008C	LAC1______	-1.17	265351	226724	aging	unknown; similar to Lag1p, has 6 potential transmembrane
YLL009C	COX17_____	-1.74	231620	132828	respiration	cytochrome oxidase assembly
YLR314C	CDC3______	+1.14	249458	285572	cytokinesis	septin
YMR052W	FAR3______	+1.22	121032	147744	cell cycle, pheromone arrest	unknown
YNL101W	__________	+1.28	208742	267116	unknown	unknown; similar to members of a putative transporter family
YOL009C	MDM12_____	+1.14	172958	197008	mitochondrial inheritance	transmembrane protein
YOR219C	STE13_____	+1.82	171843	313526	mating	alpha-factor maturation
YPL198W	RPL7B_____	-1.04	5001411	4805545	protein synthesis	ribosomal protein L7B
YAR068W	__________	-1.22	120577	98965	unknown	unknown; similar to ICWP protein
YBL019W	APN2______	-1.07	50738	47434	DNA repair	exonuclease III homolog (AP endonuclease)
YBR282W	MRPL27____	-1.37	205513	149478	protein synthesis	ribosomal protein, mitochondrial L27
YDL021W	GPM2______	+1.34	73273	98464	glycolysis	phosphoglycerate mutase
YDR151C	CTH1______	-1.10	177170	160772	unknown	unknown
YDR520C	__________	-1.01	71974	71046	unknown	unknown; similar to glycosyl hydrolase
YFL016C	MDJ1______	+1.69	207443	351178	protein folding	chaperone; DnaJ homolog
YGL213C	SKI8______	-1.43	281807	197690	meiosis, recombination	antiviral RNA binding protein
YHL017W	__________	+1.16	240037	279001	unknown	unknown; similar to Ptm1p, member of major
YIL111W	COX5B_____	-1.26	195046	154881	oxidative phosphorylation	cytochrome-c oxidase subunit Vb
YJL214W	HXT8______	+1.31	58423	76314	transport	hexose permease
YKL210W	UBA1______	+1.56	195035	304587	protein degradation, ubiquitin-mediated	E1-like (ub.-activating) enzyme
YLR144C	ACF2______	+1.48	116397	172172	cytoskeleton	cortical actin assembly
YML018C	__________	+1.43	921885	1316525	unknown	unknown
YMR245W	__________	+1.01	263388	265831	unknown	unknown
YNL303W	__________	-1.78	348982	195740	unknown	unknown
YOR043W	WHI2______	-1.02	565881	552515	cell size	unknown
YPL021W	ECM23_____	+1.04	60770	63502	cell wall biogenesis (putative)	unknown
YPR116W	__________	-1.01	60397	59857	unknown	unknown
YBR092C	PHO3______	-2.69	209557	77874	thiamine uptake	acid phosphatase, constitutive
YCR029C	__________	-1.45	534774	369807
YDL211C	__________	-1.42	112315	78927	unknown	unknown
YDR330W	__________	+1.43	112179	159947	unknown	unknown; similar to Undulin extracellular matrix
YER033C	ZRG8______	+1.50	72075	108259	unknown	unknown; zinc regulated
YGL021W	ALK1______	+1.02	52832	54127	DNA repair (putative)	DNA damage-responsive protein
YGR132C	PHB1______	-1.64	573569	349154	antiproliferative protein	unknown
YHR145C	__________	-1.72	4611091	2677307	unknown	unknown
YJL021C	__________	-1.48	315709	213432	unknown	unknown
YKL020C	SPT23_____	-1.89	253941	134023	transcription	transcription factor
YLL021W	SPA2______	-1.64	238602	145260	cytoskeleton	cortical actin patch component
YLR326W	__________	-1.31	140904	107508	unknown	unknown
YMR063W	RIM9______	+1.49	65028	96836	sporulation	stimulates expression of IME1
YNL113W	RPC19_____	-1.41	731298	520385	transcription	subunit common to RNA polymerases I and III
YOL021C	DIS3______	-1.21	40893	33798	RNA processing	3'-5' exoribonuclease complex subunit
YOR231W	MKK1______	+1.67	156220	261543	signaling, PKC1 pathway	MAP kinase (mitogen-activated protein kinase)
YPL210C	SRP72_____	-1.15	489252	425300	secretion	signal recognition particle subunit

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YBL031W	SHE1______	-1.12	51952	46243	unknown	overexpression is lethal
YBR294W	SUL1______	+2.22	69702	154594	transport	sulfate permease
YDL033C	__________	+1.20	90390	108120	unknown	unknown; similar to H. influenza protein HI0174
YDR163W	__________	+1.22	171237	209349	unknown	unknown
YDR532C	__________	-1.06	139993	131896	unknown	unknown
YFL026W	STE2______	+1.21	70182	85085	mating	alpha-factor receptor
YGL225W	GOG5______	-1.03	789801	769573	protein glycosylation	Golgi GDP-mannose transporter
YHL029C	__________	+1.12	222799	250488	unknown	unknown
YIL123W	SIM1______	+3.07	1135654	3489959	cell cycle	unknown
YJR002W	MPP10_____	-1.21	963832	795290	rRNA processing	U3 snoRNP protein
YKL222C	__________	+1.23	112957	138500	unknown	unknown; similar to transcription factors, has Zn[2]-Cys[6]
YLR156W	__________	+1.54	42211	65053	unknown	unknown
YML030W	__________	-1.34	316581	235821	unknown	unknown
YMR258C	__________	+1.39	165156	229906	unknown	unknown
YNL315C	ATP11_____	-1.34	372460	277259	ATP synthesis	F1F0-ATPase complex assembly protein
YOR055W	__________	+1.11	57505	63859	unknown	unknown
YPL033C	__________	+1.10	64177	70598	unknown	unknown
YPR128C	__________	+1.02	150307	152875	unknown	unknown; similar to ADP/ATP carrier proteins
YBR104W	YMC2______	-1.43	489253	341834	transport	mitochondrial carrier family
YCR041W	__________	-1.29	267597	207366	unknown	unknown
YDL223C	__________	+2.40	86286	206769	unknown	unknown
YDR342C	HXT7______	+1.64	2246979	3677664	transport	hexose permease
YER044C	MEI4______	+1.05	104718	109621	meiosis, chromosome pairing and recombination	unknown
YGL033W	HOP2______	+1.53	60973	93328	meiosis, chromosome pairing (putative)	unknown
YGR144W	THI4______	+1.60	44897	71648	thiamine biosynthesis	unknown; biosynthetic enzyme
YHR157W	REC104____	+1.42	47407	67484	meiosis, recombination	ds break formation complex subunit
YJL033W	HCA4______	+1.04	591527	613302	rRNA processing	RNA helicase
YKL032C	IXR1______	+1.22	698439	851996	transcription, oxygen-dependent	HMG-transcription factor
YLL033W	__________	+1.30	75877	98477	unknown	unknown
YLR338W	__________	+2.41	45703	110316	unknown	unknown
YMR075W	__________	+1.06	109946	116202	unknown	unknown
YNL125C	ESBP6_____	+1.21	334962	404198	unknown	unknown; similar to mammalian monocarboxylate transporters
YOL033W	MSE1______	+1.02	189050	192726	protein synthesis	tRNA synthetase, mitochondrial, glutamyl
YOR243C	__________	-1.01	716951	707346	unknown	unknown
YPL222W	__________	-1.38	64669	46851	unknown	unknown
YBL043W	ECM13_____	+1.58	84951	134582	cell wall biogenesis	unknown
YDL045C	FAD1______	+1.47	155578	228575	flavin biosynthesis	flavin adenine dinucleotide (FAD) synthetase
YDR173C	ARG82_____	+1.46	130047	189860	arginine metabolism	transcription factor
YDR544C	__________	+1.79	125443	224518	unknown	unknown
YFL036W	RPO41_____	+1.60	166461	265513	transcription	mitochondrial RNA polymerase
YGL236C	MTO1______	+1.04	160462	166968	salt tolerance (putative)	unknown; similar to E. coli gidA protein
YHL040C	ARN1______	+2.23	91331	203242	unknown	unknown; similar to subtelomerically-encoded proteins
YIL135C	__________	+1.05	44321	46734	unknown	unknown
YJR013W	__________	+1.40	167505	235274	unknown	unknown; similar to human angiotensin II type 1b
YKR009C	FOX2______	+1.70	55918	95311	fatty acid metabolism	peroxisomal beta-oxidation protein
YLR166C	SEC10_____	+1.20	112829	135477	secretion	exocyst complex subunit
YMR270C	RRN9______	-1.21	228744	188332	transcription	component of upstream activation factor complex (UAF)
YNL327W	EGT2______	-1.10	64421	58717	cell cycle	unknown
YOR067C	ALG8______	-1.10	339759	307494	protein glycosylation	glycosyltransferase
YPL045W	VPS16_____	+1.12	237571	266837	vacuolar protein targeting	component of sorting nexin complex
YPR138C	MEP3______	+1.13	675920	760893	transport	ammonia permease
YBR115C	LYS2______	+1.12	559518	623952	lysine biosynthesis	L-aminoadipate-semialdehyde dehydrogenase
YCR053W	THR4______	-1.08	1120075	1034314	threonine biosynthesis	threonine synthase
YDL235C	YPD1______	+1.28	425308	546076	signaling	two-component phosphorelay intermediate
YDR354W	TRP4______	-1.25	483369	385784	tryptophan biosynthesis	anthranilate phosphoribosyltransferase
YER054C	GIP2______	+1.72	6168206	10631782	glucose repression	(putative) Glc7p regulatory subunit
YGL045W	__________	+1.34	179533	241190	unknown	unknown
YGR156W	__________	-1.00	204094	203184	unknown	unknown
YHR169W	DBP8______	-1.32	548064	414361	unknown	RNA helicase
YJL046W	__________	-1.11	203532	183598	unknown	unknown; similar to lipoate-protein ligase A
YKL043W	PHD1______	+1.18	254372	300462	pseudohyphal growth	transcription factor
YLL045C	RPL8B_____	-1.27	12187691	9592257	protein synthesis	ribosomal protein L8B
YLR350W	__________	+1.44	370361	533884	unknown	unknown
YMR086W	__________	+1.47	84670	124855	unknown	unknown
YNL137C	NAM9______	+1.13	305260	344620	protein synthesis	ribosomal protein, mitochondrial S4 (putative)
YOL045W	__________	+1.75	362405	633313	unknown	protein kinase
YOR255W	__________	+1.22	58329	71065	unknown	unknown
YPL234C	TFP3______	-1.31	1236767	946729	vacuolar acidification	vacuolar H+-ATPase V0 domain 17 KD subunit
YBL055C	__________	+1.25	153888	192663	unknown	unknown
YDL057W	__________	+3.68	65748	242129	unknown	unknown
YDR184C	ATC1______	-1.09	304278	279652	cell polarity	member of Bud6p complex
YFL048C	EMP47_____	+1.30	404605	525257	secretion	unknown; ER/Golgi membrane protein
YGL248W	PDE1______	+3.44	338764	1164678	purine metabolism	3',5'-cyclic-nucleotide phosphodiesterase
YHR001W	__________	+1.06	308432	325587	unknown	unknown; similar to Ykr003p and members of the oxysterol-binding protein family
YIL147C	SLN1______	+1.09	972040	1063150	signaling	two-component pathway
YJR025C	BNA1______	-1.20	641979	535383	nicotinic acid biosynthesis	3-hydroxyanthranilic acid dioxygenase
YKR021W	__________	+1.43	88977	127046	unknown	unknown
YLR178C	TFS1______	+2.36	177858	419172	cell cycle	suppresses cdc25 mutations
YML049C	RSE1______	+2.35	296118	696162	secretion and RNA splicing	unknown
YMR282C	AEP2______	+1.28	167970	215496	protein synthesis	translation of ATP9/OLI1 mRNA
YNL339C	YRF1-6____	+1.09	53039	57582	unknown	Y' helicase (subtelomerically-encoded)
YOR079C	ATX2______	+1.44	268027	385994	oxidative stress response	manganese-trafficking protein
YPL057C	SUR1______	+4.73	178710	844559	sphingolipid metabolism	suppresses cls2-2and rvs161
YPR150W	__________	+2.42	83625	202056	unknown	unknown
YBR127C	VMA2______	+1.20	492300	590503	vacuolar acidification	58 kD regulatory subunit
YCR065W	HCM1______	+1.14	79686	90541	transcription (putative)	forkhead family of DNA-binding proteins
YDL247W	__________	+1.83	44236	80942	unknown	unknown; similar to maltose permeases including Yjr160p,
YER064C	__________	+1.56	254274	395484	unknown	unknown; similar to members of a putative transporter family
YGL057C	__________	+1.36	127149	172381	unknown	unknown
YGR164W	__________	-1.23	113494	92270	unknown	unknown; similar to Hansenula wingei mitochondrial
YHR181W	__________	-1.12	346611	308587	unknown	unknown
YJL058C	__________	+1.79	104595	186716	unknown	unknown
YKL055C	OAR1______	+1.07	47714	51085	respiration	3-oxo-acyl-(acyl carrier protein) reductase
YLL057C	__________	+3.15	171820	541917	unknown	unknown; similar to C-terminal half E. coli dioxygenase
YLR362W	STE11_____	+1.75	82469	144665	signaling, pheromone and pseudohyphal growth pathways	MAPKKK (mitogen-activated protein kinase kinase kinase)
YMR097C	__________	+1.21	240240	290503	unknown	unknown
YNL149C	__________	-1.06	799932	753669	unknown	unknown
YOL055C	THI20_____	+2.01	159114	320141	thiamine metabolism (putative)	unknown; similar to bacterial transcription factors
YOR267C	__________	+1.92	942013	1813246	unknown	protein kinase
YPL246C	__________	+1.35	303331	409363	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YBL067C	UBP13_____	+1.23	90637	111383	protein degradation, ubiquitin-mediated	ubiquitin carboxyl-terminal hydrolase
YDL069C	CBS1______	-1.25	122329	98094	protein synthesis	translation activator of COB mRNA (mitochondria)
YDR196C	__________	+1.04	215585	224610	unknown	unknown
YFL060C	SNO3______	+1.41	127166	178959	unknown	unknown; induced in stationary phase
YGL260W	__________	+2.20	72000	158369	unknown	unknown; similar to Yir040p
YHR011W	DIA4______	+1.16	120619	140520	pseudohyphal growth (putative)	unknown
YIL158W	__________	-1.56	389256	249517	unknown	unknown; similar to Ykr100p
YJR036C	HUL4______	+1.08	77632	84076	protein degradation (putative)	ubiquitin-protein ligase (E3)
YKR033C	__________	+1.40	79028	110872	unknown	unknown; similar to Gat1p
YLR190W	__________	+1.83	284126	520731	unknown	unknown
YML060W	OGG1______	+1.05	227461	239175	DNA repair	8-oxoguanine DNA glycosylase
YMR293C	__________	+1.29	122252	157774	unknown	unknown; similar to amidase
YNR012W	URK1______	-1.09	358838	327722	pyrimidine metabolism	uridine kinase
YOR091W	__________	-1.07	707443	660163	unknown	unknown
YPL067C	__________	+3.17	82204	260891	unknown	unknown
YBR139W	__________	+1.47	201931	295837	unknown	unknown; similar to serine-type carboxypeptidases
YCR076C	__________	+1.56	118958	184986	unknown	unknown
YDR011W	SNQ2______	+1.48	626861	925513	4-nitroquinoline-N-oxide resistance	putative ATP-dependent permease
YDR376W	ARH1______	+1.07	205334	220090	unknown	unknown; similar to human adrenodoxin reductase
YER073W	ALD5______	-1.30	962636	740867	fermentation	mitochondrial aldehyde dehydrogenase
YGL069C	__________	-1.25	437090	349486	unknown	unknown
YGR176W	__________	-1.09	176657	162302	unknown	unknown
YHR193C	EGD2______	-1.39	5403980	3896501	protein synthesis (putative)	homolog of human nascent-polypeptide-associated complex subunit
YJL070C	__________	-1.23	133944	108658	unknown	unknown; similar to rat AMP deaminase 1
YKL067W	YNK1______	+2.00	484483	971273	nucleotide metabolism	nucleoside diphosphate kinase
YLR002C	__________	-1.29	751259	584191	unknown	unknown
YLR374C	__________	+1.68	79579	133588	unknown	unknown
YMR109W	MYO5______	+1.58	85430	135201	cytoskeleton	myosin, class I
YNL161W	CBK1______	+2.19	218552	479308	cell wall biosynthesis (putative)	protein kinase
YOL067C	RTG1______	+1.80	74290	133519	organelle communication	h-l-h transcription factor
YOR279C	__________	+1.07	213335	227778	unknown	unknown
YPL257W	__________	+1.12	96475	107990	unknown	unknown
YBL079W	NUP170____	+1.07	314725	335650	nuclear protein targeting	nuclear pore protein
YDL081C	RPP1A_____	-1.51	7054797	4669660	protein synthesis	ribosomal protein P1A, acidic
YDR208W	MSS4______	-2.20	321696	146272	actin organization	Phosphatidylinositol 4-Phosphate Kinase
YFR004W	RPN11_____	+1.40	515086	721186	transcription	putative global regulator
YGR009C	SEC9______	+1.01	303378	306251	secretion	plasma membrane t-SNARE
YHR022C	__________	+1.50	98897	148645	unknown	unknown; similar to N-terminal region of ras-related
YIL170W	HXT12_____	+1.29	127101	163916	transport	hexose permease
YJR048W	CYC1______	+1.45	1594401	2310136	oxidative phosphorylation	cytochrome-c isoform 1
YKR045C	__________	+1.21	328317	398451	unknown	unknown
YLR202C	__________	-1.37	114198	83526	unknown	unknown
YML072C	__________	+1.21	1383600	1677906	unknown	unknown
YMR304W	UBP15_____	+1.20	155046	186066	protein degradation, ubiquitin-mediated	putative deubiquitinating enzyme
YNR024W	__________	-1.25	208823	167568	unknown	unknown
YOR103C	OST2______	-1.01	448795	442266	protein glycosylation	oligosaccharyltransferase complex subunit
YPL079W	RPL21B____	-1.93	10908422	5647770	protein synthesis	ribosomal protein L21B
YPR170C	__________	-1.48	433756	293516	unknown	unknown
YBR151W	APD1______	+1.30	37130	48375	cytoskeleton (putative)	unknown
YCR088W	ABP1______	+2.03	338948	689713	cytoskeleton	actin binding protein
YDR023W	SES1______	-1.01	940684	933665	protein synthesis	tRNA synthetase, seryl
YDR388W	RVS167____	+2.69	275719	742026	cytoskeleton	actin-binding protein
YER085C	__________	+1.35	47078	63422	unknown	unknown
YGL081W	__________	+1.09	51619	56451	unknown	unknown
YGR188C	BUB1______	+1.12	149636	167942	cell cycle, checkpoint	protein kinase
YHR205W	SCH9______	+1.16	300774	348058	signaling	protein kinase
YJL082W	IML2______	+3.10	87321	270400	plasmid maintenance (putative)	unknown
YKL079W	SMY1______	+2.29	121425	278639	cytoskeleton	kinesin-related protein
YLR014C	PPR1______	+1.35	117411	158270	pyrimidine biosynthesis	transcription factor
YLR386W	__________	-1.18	127180	107735	unknown	unknown
YNL173C	MDG1______	+1.10	97195	107008	signaling, pheromone pathway	unknown
YOL079W	__________	-1.10	113066	102878	unknown	unknown; similar to NADH dehydrogenase chain 4-honeybee
YOR291W	__________	+1.28	466254	596434	unknown	unknown; similar to cation translocating ATPases
YPL267W	__________	-1.42	173970	122501	unknown	unknown
YBL091C	MAP2______	+1.06	319978	338138	protein processing	methionine aminopeptidase 2
YDL093W	PMT5______	+1.07	173554	185449	protein glycosylation	dolichyl phosphate-D-mannose:protein O-D-mannosyltransferase
YDR216W	ADR1______	+3.75	204644	766460	transcription	ADH2 and peroxisomal protein transcription factor
YFR016C	__________	+1.56	390546	609051	unknown	unknown; similar to Uso1p and to rat neurofilament
YGR021W	__________	-1.35	264829	195518	unknown	unknown
YHR034C	__________	+1.08	229747	249211	unknown	unknown
YIR004W	DJP1______	+1.24	385699	478445	peroxisome biogenesis	unknown
YJR060W	CBF1______	+1.52	139504	211878	mitosis	kinetochore protein
YKR057W	RPS21A____	-1.81	8021235	4428239	protein synthesis	ribosomal protein S21A
YLR214W	FRE1______	+1.81	356417	646774	iron homeostasis	ferric (and cupric) reductase
YML084W	__________	+1.16	56110	65053	unknown	unknown
YMR314W	PRE5______	+1.13	901466	1019243	protein degradation	20S proteasome subunit(alpha6)
YNR036C	__________	+1.04	487696	507101	unknown	unknown; similar to ribosomal protein S12
YOR115C	TRS33_____	+1.01	445859	449129	secretion (putative)	transport protein particle (TRAPP) subunit, 33 kD
YPL091W	GLR1______	-1.33	1075603	810672	glutathione metabolism	glutathione reductase
YPR182W	SMX3______	+1.19	209389	249038	mRNA splicing	core snRNP protein
YBR162W	YSY6______	-1.02	886642	870981	secretion (putative)	unknown
YCR099C	__________	+3.41	114949	391424	unknown	unknown; similar to Pep1p, probably represents a fragmented coding region of a pseudogene
YDR400W	URH1______	-1.09	207078	190119	pyrimidine metabolism	uridine nucleosidase
YER095W	RAD51_____	+2.05	206462	422291	DNA repair and recombination	recombinase
YGL093W	SPC105____	+1.11	143366	158855	cytoskeleton	spindle pole body component
YGR200C	ELP2______	+1.05	386725	407602	transcription	RNA polymerase II subunit (elongator)
YJL094C	__________	+2.89	75268	217220	unknown	unknown; similar to Enterococcus hirae Na+/H+-antiporter
YKL091C	__________	+1.46	107774	156983	unknown	unknown; similar to Sec14p
YLR026C	SED5______	+1.18	254208	299924	secretion	ER-to-Golgi t-SNARE
YLR398C	SKI2______	+1.25	88089	110310	mRNA decay and virus resistance	putative helicase
YMR132C	__________	-1.17	155374	133222	unknown	unknown
YNL185C	MRPL19____	-1.19	325513	273837	protein synthesis	ribosomal protein, mitochondrial L19
YOL091W	SPO21_____	+1.09	96970	105256	sporulation	unknown
YOR302W	__________	+1.75	64679	113299	unknown	unknown
YPL279C	__________	+1.37	226537	311454	unknown	unknown
YAL011W	__________	-1.01	112885	111637	unknown	unknown
YBR175W	__________	-1.25	152787	121879	unknown	unknown
YCRX05W	__________	-1.08	64103	59131
YDR046C	BAP3______	+2.01	368251	738736	transport	branched-chain amino acid permease
YDR413C	__________	-1.39	355445	256174	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YER108C	FLO8______	+1.30	154161	201044
YGL106W	MLC1______	+1.16	482020	557675	cytoskeleton	myosin light chain
YGR213C	RTA1______	+4.01	85084	340807	7-aminocholesterol resistance	unknown
YIL010W	DOT5______	+1.26	238745	300824	transcription	derepressor of telomeric silencing
YJL107C	__________	+3.73	52430	195308	unknown	unknown
YKL103C	LAP4______	+2.67	271782	726387	protein degradation	vacuolar aminopeptidase ysc1
YLR037C	__________	+2.45	101602	249364	unknown	unknown; similar to Pau3p and other members of the PAU1
YMR144W	__________	+1.43	112378	160898	unknown	unknown
YNL198C	__________	+1.56	41104	63979	unknown	unknown
YOR314W	__________	+1.39	40731	56560	unknown	unknown
YPR009W	__________	-1.15	228706	198032	unknown	unknown
YBL102W	SFT2______	-1.36	250632	184712	unknown	suppresses sed5 ts mutants
YCL009C	ILV6______	-1.19	795847	670191	isoleucine and valine biosynthesis	acetolactate synthase
YDL106C	GRF10_____	-1.08	96031	89142	phosphate signaling	transcription factor
YDR229W	__________	-1.03	59186	57678	unknown	unknown
YEL010W	__________	-1.25	48184	38621	unknown	unknown
YFR029W	PTR3______	+1.37	110870	151824	transport	peptide permease regulator
YGR032W	GSC2______	+5.94	216795	1288017	cell wall biogenesis	1,3-beta-D-glucan synthase subunit
YHR046C	__________	-1.49	338698	227488	unknown	unknown; similar to inositol monophosphatase of E. coli,
YIR017C	MET28_____	+1.59	81084	128729	sulfur amino acid metbolism	transcriptional activator
YJR073C	OPI3______	+1.30	369847	480752	phospholipid metabolism	methylene-fatty-acyl-phospholipid synthase
YKR070W	__________	+1.01	259788	263477	unknown	unknown
YLR227C	__________	-2.27	175178	77187	unknown	unknown
YML096W	__________	-1.14	284091	249848	unknown	unknown
YNL010W	__________	-1.47	1675386	1141579	unknown	unknown
YNR049C	MSO1______	+1.03	303664	314106	secretion	unknown; interacts with Sec1p
YOR128C	ADE2______	+1.19	164195	196110	purine biosynthesis	phosphoribosylaminoimidazole carboxylase
YPL104W	MSD1______	-1.02	126254	124267	protein synthesis	tRNA synthetase, mitochondrial, aspartyl
YPR195C	__________	+1.26	55616	69984	unknown	unknown
YAL023C	PMT2______	-1.06	439350	416302	protein glycosylation	dolichyl phosphate-D-mannose:protein O-D-mannosyltransferase
YBR187W	__________	-1.57	283671	180288	unknown	unknown; similar to ND5 and PSB2 (SP:P03920 and SP:P20898)
YCRX17W	__________	+1.03	299318	308540
YDR058C	TGL2______	+1.15	65135	75152	fatty acid metabolism	triacylglycerol lipase
YDR425W	__________	+1.01	106609	108176	unknown	unknown
YGL118C	__________	+1.08	33699	36404	unknown	unknown; similar to Autographa californica late expression
YGR225W	AMA1______	-1.06	33827	31991	sporulation	activator of meiotic anaphase promoting complex
YIL021W	RPB3______	-1.24	471307	379786	transcription	RNA polymerase II 45 kDa subuni
YJL119C	__________	-1.07	83308	77979	unknown	unknown
YKL115C	__________	+1.24	43279	53742	unknown	unknown
YLR049C	__________	-1.14	188040	164715	unknown	unknown
YLR421C	RPN13_____	+1.05	643572	674766	protein degradation (putative)	26S proteasome subunit (putative)
YMR155W	__________	+1.33	121833	161562	unknown	unknown; similar to E. coli ribosomal protein S8
YNL210W	MER1______	+1.27	76533	97534	meiosis, MER2 mRNA splicing	RNA binding protein
YOL114C	__________	-1.19	60797	50883	unknown	unknown; similar to human DS-1 protein
YOR326W	MYO2______	+1.03	63625	65251	cytoskeleton	myosin, class V
YPR021C	__________	+1.16	199876	231449	unknown	unknown; similar to proteins of the mitochondrial carrier family
YBR001C	NTH2______	+1.74	132943	231901	trehalose metabolism	alpha,alpha-trehalase
YCL022C	__________	+1.51	238998	361963	unknown	unknown
YDL118W	__________	+1.72	155857	267360	unknown	unknown
YEL021W	URA3______	+1.02	15733592	16114066	pyrimidine biosynthesis	orotidine-5'-phosphate decarboxylase
YFR038W	__________	-3.28	2426781	740129	unknown	unknown
YGR039W	__________	-1.93	308860	160146	unknown	unknown; similar to Sauroleishmania tar protein 1
YIR026C	YVH1______	-1.70	408964	240351	sporulation	protein phosphatase
YJR086W	STE18_____	+1.13	301696	341407	signaling, pheromone pathway	gamma subunit of G protein
YKR082W	NUP133____	-1.98	410914	207313	nuclear protein targeting	nuclear pore protein
YLR237W	THI7______	+1.29	172168	222854	transport	thiamine transporter
YML106W	URA5______	-1.47	2720647	1851364	pyrimidine biosynthesis	orotate phosphoribosyltransferase
YNL022C	__________	+1.09	338669	367567	unknown	unknown
YNR061C	__________	-1.17	262347	224852	unknown	unknown
YOR140W	SFL1______	+1.53	125780	192171	cell surface assembly	transcription factor
YPL116W	HOS3______	+1.32	119202	157098	unknown	unknown; similar to Hda1p, Rpd3p, Hos2p, and Hos1p
YAL034W	MTW1______	-1.27	112129	88094	unknown	unknown
YBR199W	KTR4______	-1.24	145343	117460	protein glycosylation	putative alpha-1,2-mannosyltransferase
YDR070C	__________	+1.07	52374	55959	unknown	unknown
YDR437W	__________	+1.09	71291	77707	unknown	unknown
YER131W	RPS26B____	-1.66	9925251	5977709	protein synthesis	ribosomal protein S26B
YGL130W	CEG1______	-1.61	151469	93948	mRNA capping	mRNA guanylyltransferase
YGR237C	__________	+1.92	103786	199226	unknown	unknown
YIL033C	SRA1______	+1.64	404275	664260	signaling?	cAMP dependent protein kinase, regulatory subunit
YJL131C	__________	+1.17	114779	134432	unknown	unknown; similar to carbamylphosphate synthetase
YKL127W	PGM1______	+1.58	293342	462709	glycolysis	phosphoglucomutase
YLR061W	RPL22A____	-1.82	4021197	2204132	protein synthesis	ribosomal protein L22A
YLR431C	__________	+1.07	140009	149929	unknown	unknown
YNL222W	SSU72_____	-1.08	70286	64820	transcription	nuclear protein
YOL126C	MDH2______	+2.53	115031	291143	TCA cycle	malate dehydrogenase
YOR338W	__________	+2.46	226841	556954	unknown	unknown
YPR033C	HTS1______	-1.42	1941520	1369128	protein synthesis	tRNA synthetase, histidyl
YBR012W	TY1A______	+2.49	4578328	11388353	unknown	unknown
YCL034W	__________	-1.27	437263	344588	unknown	unknown
YDL130W	RPP1B_____	-1.90	7100833	3736246	protein synthesis	ribosomal protein L44', acidic
YDR253C	MET32_____	-1.56	304758	195099	methionine metabolism	transcription factor
YEL033W	__________	-1.33	2842743	2144327	unknown	unknown
YFR050C	PRE4______	+1.12	918680	1029217	protein degradation	proteasome subunit, B type
YGR051C	__________	+1.21	103986	125318	unknown	unknown
YHR067W	__________	+1.83	75783	138815	unknown	unknown
YIR038C	GTT1______	+2.00	194760	390255	glutathione metabolism	glutathione transferase
YJR097W	__________	+1.62	73031	118111	unknown	unknown; similar to E. coli DnaJ
YKR094C	RPL40B____	-1.15	6593155	5740097	protein synthesis	ribosomal protein L40B
YLR249W	YEF3______	+1.04	56735	58823	protein synthesis	translation elongation factor eEF3
YML117W	__________	+2.41	99156	238802	unknown	unknown
YNL034W	__________	-1.10	59003	53674	unknown	unknown; similar to Ynl018p
YNR073C	__________	+1.07	72295	77050	unknown	unknown; similar to E. coli D-mannonate oxidoreductase
YOR150W	MRPL23____	-1.19	379202	318284	protein synthesis	ribosomal protein, mitochondrial large subunit
YPL128C	TBF1______	-1.22	223845	183818	telomere length regulation	telomere TTAGGG repeat-binding factor
YAL043C	PTA1______	-1.13	91208	80637	tRNA processing	unknown
YBR211C	AME1______	-1.17	105649	90127	unknown	microtubule associated
YDR082W	STN1______	-1.33	124528	93494	telomere length regulation	asssociates with Cdc13p
YDR449C	__________	-1.48	412694	279322	unknown	unknown
YER141W	COX15_____	-1.04	269848	260136	respiration	cytochrome oxidase assembly factor
YGL142C	GPI10_____	+1.19	123223	146317	phospholipid metabolism	glycosyl phosphatidyl inositol (GPI) synthesis

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YGR249W	MGA1______	+1.23	47954	58927	pseudohyphal growth (putative)	unknown
YIL045W	PIG2______	+1.33	106723	142391	glucose repression	(putative) Glc7p regulatory subunit
YJL143W	TIM17_____	-1.26	648380	515386	mitochondrial protein targeting	inner membrane translocase component
YKL139W	CTK1______	+1.25	100566	125240	transcription	protein kinase; phosphorylates RNA pol. II subunit
YLR073C	__________	-1.19	420468	353411	unknown	unknown
YLR443W	ECM7______	+1.12	239831	269332	cell wall biogenesis	unknown
YMR176W	ECM5______	+1.60	291976	468154	cell wall biogenesis	unknown
YNL234W	__________	-1.08	146481	135120	unknown	unknown; similar to mammalian globins
YOL138C	__________	+1.63	149180	243489	unknown	unknown
YOR348C	PUT4______	+1.77	85149	150641	transport	proline and gamma-aminobutyrate permease
YPR045C	__________	+1.12	92945	104059	unknown	unknown; similar to C. elegans protein
YBR023C	CHS3______	+2.66	111925	297857	cell wall biogenesis	chitin synthase III
YCL046W	__________	+1.50	36082	54170	unknown	unknown
YDL140C	RPO21_____	+1.15	544135	624499	transcription	RNA polymerase II 215 kD subunit
YEL045C	__________	+2.07	48489	100325	unknown	unknown
YGR063C	SPT4______	-1.16	357711	308435	transcription	elongation factor
YHR078W	__________	+1.13	138125	156445	unknown	unknown
YJR109C	CPA2______	+1.23	204579	251739	glutamate metabolism	carbamyl phosphate synthetase
YKR106W	__________	+1.24	61045	75687	unknown	major facilitator superfamily
YLR258W	GSY2______	+2.38	122262	290661	glycogen metabolism	glycogen synthase
YML129C	COX14_____	+1.06	178978	190118	respiration	cytochrome-c oxidase assembly protein
YNL044W	YIP3______	+1.37	862764	1182212	unknown	unknown; interacts with Ypt protein(s)
YOR162C	YRR1______	+1.70	214336	363452	transport	transcriptional activator of SNQ2
YPL140C	MKK2______	+1.53	173599	265319	signaling, PKC1 pathway	MAP kinase (mitogen-activated protein kinase)
YAL056W	__________	+1.69	31969	53882	unknown	unknown
YBR223C	__________	+1.71	42272	72190	unknown	unknown
YDR094W	__________	+1.06	259760	276438	unknown	unknown
YDR461W	MFA1______	+1.50	53177	79941	mating	a-factor precursor
YER151C	UBP3______	+1.30	176479	230060	protein degradation, ubiquitin-mediated	ubiquitin-specific protease
YGL154C	LYS5______	+1.09	143465	156016	lysine biosynthesis	aminoadipate-semialdehyde dehydrogenase subunit
YGR261C	APL6______	+1.04	141651	146740	vacuolar protein targeting	AP-3 complex subunit
YIL057C	__________	-1.53	712293	465857	unknown	unknown
YJL155C	FBP26_____	+4.37	125643	548544	fructose metabolism	fructose-2,6-bisphosphatase
YKL151C	__________	+1.47	137618	202157	unknown	unknown
YLR085C	ARP6______	-1.04	142548	137429	cytoskeleton (putative)	actin-related protein
YLR455W	__________	+1.43	130061	185509	unknown	unknown
YMR188C	__________	-1.41	385489	273698	unknown	unknown; similar to 30S ribosomal proteins (S17)
YNL246W	__________	+1.20	396399	474411	unknown	unknown; similar to Drosophila melanogaster SET protein
YOL150C	__________	-1.16	804147	691408	unknown	unknown
YOR360C	PDE2______	-1.06	788459	740503	signaling (putative)	high affinity 3',5'-cAMP phosphodiesterase
YPR057W	BRR1______	-1.04	214414	206544	mRNA splicing	required for snRNP biogenesis
YBR035C	PDX3______	+1.06	470547	500440	sterol uptake (putative)	pyridoxine (pyridoxamine) phosphate oxidase
YCL058C	__________	-1.12	464570	415119	unknown	unknown
YDL152W	__________	+1.14	94037	107380	unknown	unknown
YDR273W	__________	+1.35	58677	79182	unknown	unknown
YEL057C	__________	+1.11	76622	85327	unknown	unknown
YGR075C	PRP38_____	-1.10	208064	188871	mRNA splicing	U4/U6 snRNA dissociation factor
YHR089C	GAR1______	-1.58	1853947	1176535	rRNA processing	snoRNP protein
YJR121W	ATP2______	+2.59	1729331	4480628	ATP synthesis	F1F0-ATPase complex, F1 beta subunit
YLR269C	__________	-1.22	128537	105701	unknown	unknown
YMR008C	PLB1______	+4.47	444895	1988683	phospholipid metabolism	phospholipase B
YOR174W	MED4______	-1.13	56896	50349	transcription	RNA polymerase II mediator subunit
YPL152W	RRD2______	+1.32	185777	245925	drug resistance	unknown
YBR235W	__________	+1.26	57618	72800	unknown	unknown; similar to human SLC12A1 gene for which mutations
YDR104C	SPO71_____	+1.69	72875	123006	sporulation	unknown
YDR473C	PRP3______	+1.69	117617	198726	mRNA splicing	U4/U6 snRNP protein
YER161C	SPT2______	-1.17	314039	268917	chromatin structure	HMG-like non-histone protein
YGL166W	CUP2______	+2.01	162724	326732	transcription	copper-dependent transcriptional activator
YGR273C	__________	+1.76	72347	127563	unknown	unknown
YIL068C	SEC6______	+1.56	391038	608542	secretion	exocyst complex subunit
YJL167W	ERG20_____	+1.33	2489341	3319779	sterol metabolism	farnesyl-pyrophosphate synthetase
YKL163W	PIR3______	+6.64	1938832	12867651	unknown	unknown; similar to members of the Pir1p/Hsp150p/Pir3p
YLR097C	__________	+1.33	161306	213975	unknown	unknown
YLR467W	YRF1-5____	+2.41	4039304	9745929	unknown	Y' helicase (subtelomerically-encoded)
YMR199W	CLN1______	+1.25	198512	248859	cell cycle	G1/S cyclin
YNL258C	__________	+1.10	63371	69759	unknown	unknown
YOL162W	__________	+2.36	90750	213947	unknown	unknown
YOR372C	NDD1______	+1.63	400586	651593	mitosis (putative)	unknown
YPR069C	SPE3______	+1.11	54427	60445	polyamine biosynthesis	putrescine aminopropyltransferase (spermidine synthase)
YBR047W	__________	+1.09	43873	47632	unknown	unknown
YCL073C	__________	+1.22	61581	75337	unknown	major facilitator superfamily
YDL164C	CDC9______	+1.39	182453	253992	DNA replication and repair	DNA ligase
YDR285W	ZIP1______	+1.23	67208	82871	meiosis	synaptonemal complex protein
YEL068C	__________	-1.22	105388	86144	unknown	unknown
YGR087C	PDC6______	+2.01	1014162	2043027	glycolysis	pyruvate decarboxylase 3
YHR101C	BIG1______	+1.00	144018	144143	signaling (putative)	suppresses rot1/rot2 synthetic lethality
YJR133W	XPT1______	+1.09	377990	412259	xanthine utilization	xanthine phosphoribosyltransferase
YLR281C	__________	+1.25	50542	63245	unknown	unknown
YMR020W	FMS1______	+1.93	179127	346595	sterol metabolism (putative)	unknown
YNL066W	SUN4______	+1.24	1167681	1451941	aging	unknown
YOR186W	__________	-1.12	61950	55282	unknown	unknown
YPL164C	MLH3______	+1.36	133004	180350	DNA repair; DNA recombination	MutL homolog
YAR020C	PAU7______	+1.53	64861	99535	unknown	unknown; similar to Pau3p/Ycr104p, PAU1 family
YBR247C	ENP1______	-1.41	701468	497910	protein glycosylation	putative oligosaccharyltransferase complex subunit
YDR116C	__________	-1.06	216491	203578	unknown	unknown; similar to prokaryotic ribosomal protein L1
YDR485C	__________	+1.89	77356	146382	unknown	unknown; similar to human YL-1 protein, GB:D43642
YER172C	BRR2______	+1.58	226475	357522	mRNA splicing	RNA helicase
YGL178W	MPT5______	-1.04	73189	70066	unknown	unknown
YGR285C	ZUO1______	-1.19	4717895	3956775	unknown	binds Z-DNA
YIL078W	THS1______	+1.22	2077578	2541537	protein synthesis	tRNA synthetase, threonyl
YJL179W	PFD1______	-1.27	473274	372497	protein folding	prefoldin subunit 1
YKL175W	__________	+1.41	436046	613779	unknown	unknown
YLR109W	AHP1______	+1.14	3645616	4145888	oxidative stress response	alkyl hydroperoxide reductase
YMR211W	__________	-1.18	189824	161092	unknown	unknown; similar to beta-tubulins
YNL270C	ALP1______	+1.47	106147	156522	transport	basic amino acid permease
YOR008C	SLG1______	-1.24	79671	64510	signaling, stress response and cell wall integrity	unknown
YOR384W	FRE5______	+1.20	71069	85340	unknown	unknown; similar to Fre2p
YPR081C	__________	+1.40	140832	197011	unknown	unknown; similar to glycyl-tRNA synthetases
YBR059C	AKL1______	+1.89	153441	289939	unknown	protein kinase
YCLX09W	__________	+1.24	61200	76055

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YDL176W	__________	+1.28	115980	149011	unknown	unknown
YDR297W	SUR2______	-1.03	661781	641458	sphingolipid metabolism	hydroxylase
YER002W	__________	-1.11	48863	44102	unknown	unknown
YGR099W	TEL2______	+1.10	159433	174714	telomere length regulation	telomere binding protein
YHR113W	__________	+1.34	429672	576561	unknown	unknown; similar to vacuolar aminopeptidase Lap4p/Ape1p
YJR145C	RPS4A_____	+1.40	11348741	15904644	protein synthesis	ribosomal protein S4A
YLR292C	SEC72_____	-1.20	621370	517873	secretion	ER protein translocation subcomplex subunit
YNL078W	__________	-1.46	347124	238515	unknown	unknown
YOR196C	LIP5______	-1.36	626312	460507	fatty acid metabolism	lipoic acid synthase
YPL176C	__________	+1.14	120227	137504	unknown	unknown; similar to Ssp134p
YAR043C	__________	+1.85	29884	55163
YBR259W	__________	-1.00	77419	77037	unknown	unknown; similar to serine-type carboxypeptidase Prc1p
YDR128W	__________	+1.23	112988	138770	unknown	unknown
YDR497C	ITR1______	+1.59	579616	920554	transport	inositol permease
YER183C	__________	-1.71	84859	49508	unknown	unknown
YGL190C	CDC55_____	+1.07	161160	172953	cell cycle	protein phosphatase
YIL089W	__________	+1.26	88105	111446	unknown	unknown
YJL191W	RPS14B____	+1.10	2924012	3217124	protein synthesis	ribosomal protein S14B
YKL187C	__________	+1.45	79963	116318	unknown	unknown; similar to 4-mycarosyl isovaleryl-CoA transferase
YLR121C	YPS3______	+7.23	339935	2459091	protein processing	GPI-anchored aspartic protease
YMR223W	UBP8______	+1.32	140716	185706	protein degradation, ubiquitin-mediated	putative deubiquitinating enzyme
YNL282W	POP3______	+1.72	104016	178836	rRNA and tRNA processing	RNase P and RNase MRP subunit
YOR020C	HSP10_____	-1.11	1310840	1175768	protein folding	mitochondrial chaperonin
YPR093C	__________	+1.30	201971	261627	unknown	unknown
YBR071W	__________	+3.72	377422	1403263	unknown	unknown; similar to Herpesvirus saimiri EERF2
YCR009C	RVS161____	+1.17	44351	51895	cytoskeleton	actin-binding protein
YDL188C	PPH22_____	+1.23	686902	843587	cell cycle	protein phosphatase 2A
YDR309C	GIC2______	+2.41	214232	515989	bud emergence	binds Cdc42p
YER012W	PRE1______	+1.08	585090	630681	protein degradation	20S proteasome subunit C11(beta4)
YHR125W	__________	+1.03	54109	55863	unknown	unknown
YJR157W	__________	+1.26	50245	63083	unknown	unknown
YLR304C	ACO1______	+1.92	1191581	2285834	TCA cycle	aconitase
YMR043W	MCM1______	-1.09	1530461	1406191	transcription	multifunctional regulator
YNL090W	RHO2______	+1.08	211674	228990	signaling	GTP-binding protein, rho family
YOR208W	PTP2______	+2.54	183311	465494	signaling, high osmolarity pathway	protein tyrosine phosphatase
YPL187W	MF(ALPHA)1	-1.85	7524091	4073908	mating	alpha factor precursor
YBL008W	HIR1______	-1.34	40783	30394	transcription	histone transcription inhibitor
YBR271W	__________	-1.36	222207	163695	unknown	unknown; similar to Clostridium botulinum C1 toxin
YDL010W	__________	+2.06	166565	342449	unknown	unknown; similar to Ybr014p and glutaredoxins
YDR140W	__________	-1.01	225109	223850	unknown	unknown
YDR509W	__________	-1.03	55520	53692	unknown	unknown
YFL008W	SMC1______	+1.40	561536	785315	mitosis, chromosome condensation and segregation	unknown
YGL202W	ARO8______	+1.12	1236360	1379518	aromatic amino acid biosynthesis	aromatic amino acid aminotransferase
YHL008C	__________	-1.00	75442	75306	unknown	unknown; similar to E. coli NirC potential formate
YIL100W	__________	+1.21	44035	53332	unknown	unknown
YJL203W	PRP21_____	+1.24	140513	174547	mRNA splicing	U2 snRNP activation
YKL199C	YKT9______	+1.49	152030	226176	unknown	unknown
YLR133W	CKI1______	+1.80	73565	132137	lipid metabolism	choline kinase
YMR235C	RNA1______	-1.42	1396144	981093	RNA export	GTPase activating protein for Gsp1p
YNL292W	PUS4______	-1.52	296947	194974	tRNA processing	pseudouridine synthase
YOR032C	HMS1______	-1.20	176107	146720	pseudohyphal growth	similar to myc family of transcription factors
YPL010W	RET3______	-1.68	1094425	651420	secretion	vesicle coat component
YPR105C	__________	-1.06	333196	315091	unknown	unknown
YBR083W	TEC1______	+1.12	176245	197928	pseudohyphal growth	trancriptional activator
YCR020C	PET18_____	+1.02	80280	82165	mitochondrial DNA maintenance	unknown
YDL200C	MGT1______	+1.25	113810	141776	DNA repair	6-O-methylguanine-DNA methylase
YDR319C	__________	+1.81	106109	192252	unknown	unknown
YER022W	SRB4______	+1.11	129974	143930	transcription	RNA polymerase II mediator subunit
YGL010W	__________	+1.23	64003	78914	unknown	unknown
YGR121C	MEP1______	+1.24	204181	252912	transport	ammonia permease
YHR136C	SPL2______	-5.63	260499	46286	cell cycle	protein kinase inhibitor
YJL010C	__________	-1.39	314245	225590	unknown	unknown
YKL009W	MRT4______	-1.85	1767709	953143	mRNA decay	unknown
YLL010C	PSR1______	-1.20	112235	93489	salt tolerance (putative)	phosphatase
YLR315W	__________	-1.21	52200	43072	unknown	unknown
YNL102W	POL1______	+1.19	431783	515843	DNA replication	polymerase alpha 180 kD subunit
YOL010W	RCL1______	-1.11	535260	480423	unknown	putative RNA 3'-terminal phosphate cyclase
YOR220W	__________	+4.26	178624	761140	unknown	unknown
YPL199C	__________	-1.21	627193	519802	unknown	unknown
YAR069C	__________	+1.23	71383	87593	unknown	unknown
YBL020W	RFT1______	-1.57	227284	144433	cell cycle	unknown
YBR283C	SSH1______	-1.19	925195	777221	secretion	ER protein translocation complex subunit
YDL022W	GPD1______	+1.21	265816	322420	glycerol metabolism	glycerol-3-phosphate dehydrogenas
YDR152W	__________	+1.04	424702	441721	unknown	unknown
YDR521W	__________	+1.03	68052	70213	unknown	unknown
YFL017C	GNA1______	-1.29	294699	228443	UDP-N-acetylglucosamine biosynthesis	glucosamine-phosphate N-acetyltransferase
YGL214W	__________	-1.33	46030	34622	unknown	unknown
YHL018W	__________	+1.12	34499	38523	unknown	unknown; similar to human pterin-4-alpha-carbinolamine
YIL112W	__________	+1.25	159530	199340	unknown	unknown; similar to ankyrin and coiled-coil proteins
YJL215C	__________	-1.11	47089	42415	unknown	unknown
YKL211C	TRP3______	-1.16	458033	396037	tryptophan biosynthesis	anthranilate synthase component II and indole-3-phosphate synthase
YLR145W	__________	-1.18	130510	110424	unknown	unknown
YML019W	OST6______	-1.09	326916	298874	protein glycosylation	putative N-oligosaccharyltransferase complex subunit
YMR246W	FAA4______	-1.58	1798418	1136891	fatty acid metabolism	long-chain-fatty-acid--CoA ligase
YNL304W	YPT11_____	-1.27	127720	100288	signaling (putative)	unknown; similar to Ypt1p and many other ras-like GTPases
YOR044W	__________	+1.54	109851	168718	unknown	unknown
YPL022W	RAD1______	+1.34	334845	449787	DNA repair, nucleotide excision	repairosome component
YPR117W	__________	-1.15	67398	58833	unknown	unknown
YBR093C	PHO5______	-2.55	1788248	701924	phosphate metabolism	acid phosphatase, repressible
YCR030C	__________	+1.53	89856	137394	unknown	unknown
YDL212W	SHR3______	+1.68	293012	492916	secretion; protein targeting, plasma membrane	ER membrane protein
YDR331W	GPI8______	+1.15	144481	166703	protein processing	transamidase (putative), GPI anchor attachment
YER034W	__________	+2.09	77974	163152	unknown	unknown
YGL022W	STT3______	+1.03	489327	504134	protein glycosylation	oligosaccharyltransferase complex assembly
YGR133W	PEX4______	-1.00	107249	107162	protein degradation, ubiquitin-mediated	E2 ub.-conjugating enzyme
YHR146W	__________	+1.00	563796	564202	unknown	unknown; similar to pheromone adaptation protein Mdg1p
YJL022W	__________	+1.02	64529	66051	unknown	unknown
YKL021C	MAK11_____	-1.19	376865	317773	dsRNA virus propagation	unknown; essential gene
YLL022C	HIF1______	+1.13	381915	431044	chromatin structure	interacts with histone acetyltransferase
YLR327C	__________	+5.43	61644	334970	unknown	unknown; similar to Stf2p

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YMR064W	AEP1______	+1.05	244138	255770	protein synthesis(putative)	ATP9/OLI1 expression
YNL114C	__________	-1.28	661479	517003	unknown	unknown
YOL022C	__________	+1.06	636342	676020	unknown	unknown
YOR232W	MGE1______	-1.67	1260339	754547	mitochondrial protein targeting	could change to: protein folding; mitochondrial chaperone (has a targeting phenotype, only b/c misfolded proteins accumulate in the mito., which backs the pathway up)
YPL211W	NIP7______	-2.07	1463123	708412	rRNA processing	unknown
YBL032W	__________	-1.11	249973	225332	unknown	unknown
YBR295W	PCA1______	+3.64	59253	215483	transport	Cu(2+) ATPase
YDL034W	__________	+1.33	40658	53942	unknown	unknown
YDR164C	SEC1______	+1.27	146153	185772	secretion	SNARE docking complex subunit (putative0
YDR533C	__________	+1.79	405394	726377	unknown	unknown
YFL027C	__________	-1.72	214723	124661	unknown	unknown
YHL030W	ECM29_____	-1.02	38735	38132	cell wall biogenesis	unknown
YIL124W	AYR1______	-1.02	304362	297365	lipid metabolism	1-Acyl dihydroxyacetone phosphate reductase
YJR003C	__________	-1.03	208018	202337	unknown	unknown; similar to human collagen alpha 3 (VI) chain
YKL223W	__________	+2.15	53211	114267	unknown	unknown
YLR157C	ASP3-2____	+1.92	726053	1397239	asparagine utilization	L-asparaginase II
YMR259C	__________	-1.08	502342	464699	unknown	unknown
YNL316C	PHA2______	-1.22	145353	119566	phenylalanine biosynthesis	prephenate dehydratase
YOR056C	__________	-1.24	733184	591307	unknown	unknown
YPL034W	__________	-1.10	210700	190837	unknown	unknown
YPR129W	SCD6______	-1.16	467204	404257	secretion (putative)	suppressor of clathrin deficiency
YBR105C	VID24_____	+1.66	339827	565261	vacuolar protein targeting	peripheral vesicle membrane protein
YCR042C	TSM1______	+1.06	87666	93232	transcription	TFIID associated factor (TAF)
YDL224C	WHI4______	+1.61	117863	190188	cell size	putative RNA binding protein
YDR343C	HXT6______	+2.28	1899895	4336828	transport	hexose permease
YER044C	__________	-1.16	317249	273169	unknown	unknown
YGL034C	__________	-1.16	48956	42114	unknown	unknown
YGR145W	__________	+1.09	435566	475840	unknown	unknown; similar to MESA gene of Plasmodium falciparum
YHR158C	KEL1______	+1.20	63943	76762	unknown	null mutant has mating defect
YJL034W	KAR2______	+3.43	2346829	8050169	secretion	BiP homolog; ER protein translocation
YKL033W	__________	+1.17	111547	130051	unknown	unknown
YLL034C	__________	+1.16	188494	219565	unknown	unknown; similar to mammalian valosin-containing protein
YLR339C	__________	+1.85	2740525	5083669	unknown	unknown
YNL126W	SPC98_____	-1.17	106902	91239	cytoskeleton	spindle pole body component
YOL034W	__________	+1.30	134447	174175	unknown	unknown
YOR244W	ESA1______	+1.20	235517	282880	chromatin structure	histone acetyltransferase complex subunit
YPL223C	GRE1______	+1.64	77921	127896	unknown	unknown; induced by osmotic stress
YBL044W	__________	+1.28	48344	61939	unknown	unknown
YDL046W	__________	+1.60	252484	404694	unknown	unknown
YDR174W	HMO1______	+1.51	490156	738100	chromatin structure	non-histone protein
YDR545W	YRF1-1____	+1.83	2088535	3821711	unknown	Y' helicase (subtelomerically-encoded)
YFL037W	TUB2______	-1.05	844374	801068	cytoskeleton	beta-tubulin
YGL237C	HAP2______	+1.37	366599	500932	transcription; respiration	transcription factor, activator of CYC1
YHL041W	__________	-1.40	75901	54269	unknown	unknown
YIL136W	OM45______	+2.19	199583	437721	(putative) mitochondrial organization	outer mitochondrial membrane protein
YJR014W	__________	+1.14	704391	804038	unknown	unknown
YKR010C	TOF2______	+1.27	111070	140711	DNA replication (putative)	interacts with DNA
YLR167W	RPS31_____	-1.37	14833357	10793534	protein synthesis	ribosomal protein S31
YML040W	__________	+1.58	6637123	10460961	unknown	unknown
YMR271C	URA10_____	-1.02	143017	140500	pyrimidine biosynthesis	orotate phosphoribosyltransferase
YNL328C	MDJ2______	+1.21	53471	64458	protein folding	mitochondrial chaperonin
YOR068C	__________	+1.53	66516	101764	unknown	unknown
YPL046C	ELC1______	+1.11	439598	488917	transcription	elongation factor Elongin C
YPR139C	__________	-1.03	349191	339770	unknown	unknown
YBR116C	__________	+1.53	58156	89137	unknown	unknown; similar to sea urchin NADH chain ND2
YCR054C	CTR86_____	+1.10	76407	84230	unknown	unknown
YDL236W	PHO13_____	+1.10	543914	599050	unknown	protein phosphatase and 4-nitrophenylphosphatase
YDR355C	__________	-1.24	54277	43816	unknown	unknown
YER055C	HIS1______	-1.45	1579706	1090681	histidine biosynthesis	ATP phosphoribosyltransferase
YGL046W	__________	-1.01	104367	103190	unknown	unknown
YGR157W	CHO2______	+1.43	441034	630025	phospholipid metabolism	phosphatidylethanolamine N-methyltransferase
YHR170W	NMD3______	-1.28	623932	486264	mRNA decay, nonsense-mediated	Nam7p/Upf1p-interacting protein
YJL047C	RTT101____	+1.56	143969	225259	transposition (putative)	unknown; regulator of Ty1 transposition
YKL044W	__________	+1.13	56696	64323	unknown	unknown
YLL046C	RNP1______	+1.01	42373	42905	unknown	ribonucleoprotein
YLR351C	NIT3______	-1.06	648669	612544	unknown	nitrilase
YNL138W	SRV2______	+1.14	906329	1030253	signaling	adenylate cyclase-associated protein
YOL046C	__________	+1.33	73874	98110	unknown	unknown
YOR256C	__________	+1.38	182429	250916	unknown	unknown; similar to secretory protein Ssp134p
YPL235W	RVB2______	-1.22	1125329	920696	unknown	unknown; similar to RUVB
YBL056W	PTC3______	+1.10	477515	527555	osmotic stress response (putative)	protein phosphatase
YDL058W	USO1______	+1.47	491177	722020	secretion	SNARE docking complex assembly
YDR185C	__________	-1.16	93518	80696	unknown	unknown; similar to Msf1p
YFL049W	__________	+1.70	143407	243762	unknown	unknown; similar to Npl6p
YGL249W	ZIP2______	-1.18	72249	61020	meiosis, synapsis	unknown
YIL148W	RPL40A____	-1.84	12841814	6979987	protein synthesis	ribosomal protein L40A
YKR022C	__________	-1.43	306018	213278	unknown	unknown
YLR179C	__________	-1.24	750829	605060	unknown	unknown; similar to Tfs1p
YML050W	__________	-1.24	135497	109000	unknown	unknown; similar to potato sucrose cleavage protein
YMR283C	RIT1______	+1.16	164385	191050	tRNA processing	initiator methionine tRNA 2'-O-ribosyl phosphate transferase
YNR001C	CIT1______	+4.03	312612	1260880	TCA cycle	citrate synthase
YOR080W	DIA2______	+1.50	158846	238943	pseudohyphal growth (putative)	unknown
YPL058C	PDR12_____	-1.14	105287	92713	drug resistance	transporter
YPR151C	__________	+1.62	101837	164846	unknown	unknown
YBR128C	APG14_____	+1.30	58547	76224	autophagy	unknown; interacts with Apg6p/Vps30p
YCR066W	RAD18_____	-1.16	116784	100726	DNA repair, postreplication	forms complex with Rad6p; putative ATPase
YDL248W	COS7______	+2.55	970988	2477613	unknown	unknown; similar to other subtelomerically-encoded
YER065C	ICL1______	+1.84	77434	142822	glyoxylate cycle	isocitrate lyase
YGL058W	RAD6______	-1.11	420307	379054	protein degradation, ubiquitin-mediated	E2 ub.-conjugating enzyme
YGR165W	__________	+1.16	285064	330464	unknown	unknown
YHR182W	__________	+1.03	153072	157192	unknown	unknown
YJL059W	YHC3______	+1.50	143253	215392	unknown	unknown; similar to human Batten disease-related protein
YKL056C	__________	+1.05	6507884	6808839	unknown	unknown
YLL058W	__________	+1.83	1123362	2050429	unknown	unknown; similar to Neurospora crassa O-succinylhomoserine
YLR363C	NMD4______	-1.15	119567	103898	unknown	Nam7p/Upf1p-interacting protein
YMR098C	__________	+1.06	222360	236121	unknown	unknown
YNL150W	__________	-1.40	1054718	751166	unknown	unknown
YOL056W	GPM3______	-1.41	292957	208031	glycolysis	phosphoglycerate mutase
YOR268C	__________	-1.12	53323	47555	unknown	unknown
YPL247C	__________	+1.62	100521	162814	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YBL068W	PRS4______	-1.11	189811	170364	pentose phosphate cycle	ribose-phosphate pyrophosphokinase
YDL070W	BDF2______	+4.18	296740	1239010	unknown	unknown; similar to mammalian glycogen
YDR197W	CBS2______	-1.10	174817	159295	protein synthesis	translation activator of COB mRNA
YFL061W	__________	+2.39	87838	210353	unknown	unknown; similar to E. coli cyanamide hydratase (urea
YGL261C	__________	+3.08	205340	631674	unknown	unknown; similar to Pau1p and members of the PAU1
YHR012W	VPS29_____	+1.48	319456	471594	vacuolar protein targeting	targets vacuolar receptor, Vps10
YIL159W	BNR1______	+1.56	859446	1337043	cytoskeleton	actin filament organization
YJR037W	__________	+1.15	56381	64658	unknown	unknown
YKR034W	DAL80_____	+1.44	88825	128183	nitrogen catabolism	transcription factor
YLR191W	PEX13_____	+1.48	141146	208305	peroxisomal protein targeting	docks peroxisomal protein receptor
YML061C	PIF1______	+1.03	96475	98935	DNA repair, mitochondrial	DNA helicase
YMR294W	JNM1______	-1.11	242823	219253	mitosis, nuclear migration	unknown
YNR013C	__________	-1.12	828716	738902	unknown	unknown; major facilitator superfamily
YOR092W	ECM3______	+1.18	189373	224004	cell wall biogenesis	unknown
YPL068C	__________	+1.90	184343	350565	unknown	unknown
YPR159W	KRE6______	+2.63	256240	673012	cell wall biogenesis	glucan synthase subunit
YBR140C	IRA1______	-1.61	110292	68377	signaling, Ras pathway	GTPase-activating protein for Ras1p and Ras2p
YCR077C	PAT1______	-1.02	504029	492107	mitosis; chromosome transmission	topoisomerase II
YDR012W	RPL4B_____	-1.17	8389426	7158576	protein synthesis	ribosomal protein L4B
YDR377W	ATP17_____	-1.06	662165	625105	ATP synthesis	ATP synthase subunit f
YER074W	RPS24A____	-1.67	7640719	4577708	protein synthesis	ribosomal protein S24A
YGL070C	RPB9______	-2.20	560015	254848	transcription	RNA polymerase II 14.2 subunit
YGR177C	ATF2______	+1.01	133730	134789	acetate ester biosynthesis	alcohol acetyltransferase
YHR194W	__________	+1.20	110732	132711	unknown	unknown
YJL071W	ARG2______	+1.20	149050	178183	arginine biosynthesis	acetylglutamate synthase
YKL068W	NUP100____	+1.03	105177	108082	nuclear protein targeting	nuclear pore protein
YLR003C	__________	-1.11	555668	502509	unknown	unknown
YLR375W	STP3______	+1.60	329762	526122	tRNA splicing	unknown
YMR110C	__________	+1.89	161868	306676	unknown	unknown; similar to aldehyde dehydrogenase
YNL162W	RPL42A____	-2.04	10168376	4992223	protein synthesis	ribosomal protein L42A
YOL068C	HST1______	-1.05	757602	720835	silencing	Sir2p homolog
YOR280C	__________	-1.09	281354	257189	unknown	unknown; similar to S. pombe dihydrofolate reductase
YMR325W	__________	+2.11	178241	376334	unknown	unknown
YBL080C	PET112____	-1.14	62956	55221	protein synthesis	translation of COX2 mRNA (mitochondrial)
YDL082W	RPL13A____	-1.87	6970939	3730231	protein synthesis	ribosomal protein L13A
YDR209C	__________	-1.17	330792	282972	unknown	unknown
YFR005C	SAD1______	-1.49	268875	180345	mRNA splicing, snRNP assembly	unknown
YGR010W	__________	+1.27	159168	201745	unknown	unknown
YHR023W	MYO1______	+1.00	263866	264326	cell wall biosynthesis	myosin heavy chain
YIL171W	HXT12_____	+1.51	117676	177112	transport	hexose permease
YJR049C	UTR1______	+1.48	356944	527530	unknown	putative ferric reductase
YKR046C	__________	+2.77	1031794	2862846	unknown	unknown
YLR203C	MSS51_____	-1.16	326027	280159	mRNA splicing, COX1 and COB mRNA	unknown
YL16A;_	__________	-1.16	55986	48254
YNR025C	__________	-1.26	405830	322994	unknown	unknown
YOR104W	__________	+1.47	303046	445906	unknown	unknown
YPL080C	__________	-1.26	178476	141643	unknown	unknown
YPR171W	__________	+1.07	131673	141445	unknown	unknown
YBR152W	SPP381____	+1.04	77822	80632	mRNA processing (putative)	U4/U6,U5 snRNP protein
YCR089W	FIG2______	+1.22	40425	49327	mating	extracellular, cell wall protein
YDR024W	__________	-1.17	56729	48391	unknown	unknown
YDR389W	SAC7______	+2.01	119729	240951	signaling	GTPase-activating protein for Rho1p
YER086W	ILV1______	+1.35	342117	461873	isoleucine and valine biosynthesis	threonine deaminase
YGL082W	__________	-1.04	191434	183847	unknown	unknown
YGR189C	CRH1______	+3.84	1989998	7636590	cell wall biogenesis (putative)	unknown; cell wall protein
YHR206W	SKN7______	+1.27	379510	482112	oxidative stress	transcription factor
YJL083W	__________	+1.46	103850	151919	unknown	unknown; similar to Irs4p
YKL080W	VMA5______	-1.15	679868	591398	vacuolar acidification	vacuolar H+-ATPase V1 sector subunit
YLR015W	BRE2______	+1.07	242753	260242	secretion (putative)	unknown; brefeldin A sensitive
YLR387C	__________	+1.17	325947	380086	unknown	unknown
YMR121C	RPL15B____	-1.68	12588206	7477807	protein synthesis	ribosomal protein L15B
YNL174W	__________	-1.84	627630	341659	unknown	unknown
YOL080C	REX4______	-1.50	227921	151794	RNA processing	RNA exonuclease
YOR292C	__________	+1.11	145038	160832	unknown	unknown
YPL268W	PLC1______	-1.28	125700	98109	signaling	phosphoinositide-specific phospholipase C
YBL092W	RPL32_____	-1.38	2379142	1729451	protein synthesis	ribosomal protein L23
YDL094C	__________	-1.01	53780	53298	unknown	unknown
YDR217C	RAD9______	+1.06	38607	40978	DNA repair; DNA damage checkpoint	unknown
YFR017C	__________	+1.69	84022	142143	unknown	unknown
YGR022C	__________	+1.28	44201	56361	unknown	unknown
YHR035W	__________	-1.07	75911	70706	unknown	unknown; similar to Sec23p, expressed under
YIR005W	IST3______	-1.02	129843	126882	salt tolerance (putative)	unknown
YJR061W	__________	+1.40	152691	213638	unknown	unknown
YKR058W	GLG1______	+1.15	107362	123073	glycogen metabolism	glycogen synthesis initiator
YLR215C	CDC123____	-1.02	214735	209808	unknown	unknown
YMR315W	__________	+2.74	456443	1252537	unknown	unknown
YNR037C	__________	+1.48	230714	340602	unknown	unknown; similar to prokaryotic ribosomal protein S19
YOR116C	RPO31_____	+1.41	796157	1122830	transcription	RNA polymerase III 160 kD subunit
YPL092W	SSU1______	-1.25	175049	140202	sulfite tolerance	unknown; plasma membrane protein, major facilitator superfamily
YPR183W	DPM1______	+1.19	1236875	1469707	protein glycosylation	dolichol phosphate mannose synthase
YBR163W	DEM1______	+1.28	63219	81225	cell morphology (putative)	unknown; similar to Pta1p
YCR100C	__________	+4.74	69307	328433	unknown	unknown; similar to Pep1p, probably represents a fragmented coding region of a pseudogene
YDR401W	__________	+1.30	38724	50263	unknown	unknown
YER096W	SHC1______	+1.31	40405	53094	sporulation	unknown; may be involved in chitin synthesis
YGL094C	PAN2______	-1.03	64103	62075	mRNA processing	Pab1p-dependent poly(A) ribonuclease subunit
YGR201C	__________	+1.08	222055	239612	unknown	unknown; similar to translation elongation factors
YHR215W	PHO12_____	-6.06	4089741	675303	phosphate metabolism	secreted acid phosphatase
YJL095W	BCK1______	+1.04	68777	71849	signaling, PKC1 pathway	serine-threonine protein kinase
YKL092C	BUD2______	-1.06	75564	71273	bud site selection	GTPase-activating protein for Rsr1p/Bud1p
YLR027C	AAT2______	-1.07	1202868	1120060	aspartate metabolism	aspartate aminotranferase,
YLR399C	BDF1______	+1.45	258243	375113	meiosis	putative chromatin component
YMR133W	REC114____	+1.31	84781	111347	meiosis, recombination	ds break formation complex subunit
YNL186W	UBP10_____	+1.43	484913	694590	protein degradation, ubiquitin-mediated	ubiquitin C-terminal hydrolase
YOL092W	__________	-1.51	650236	429993	unknown	unknown
YOR303W	CPA1______	+1.61	1515251	2434737	arginine biosynthesis	carbamoyl phosphate synthetase, arginine specific
YPL280W	__________	+1.55	79236	122533	unknown	unknown
YAL012W	CYS3______	+1.47	1148215	1691427	methionine biosynthesis	cystathionine gamma-lyase
YBR176W	ECM31_____	-1.16	129513	111882	cell wall biogenesis	unknown
YCRX06W	__________	-1.17	44913	38288
YDR047W	HEM12_____	-1.00	449280	447458	heme biosynthesis	uroporphyrinogen decarboxylase

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YDR414C	ERD1______	-1.08	140354	129784	secretion	ER protein retention
YER109C	FLO8______	-1.30	56377	43361	flocculation (and PHD)	FLO1 activator
YGL107C	__________	+1.01	49846	50256	unknown	unknown
YGR214W	RPS0A_____	-1.31	6984020	5338490	protein synthesis	ribosomal protein S0A
YIL011W	__________	+1.08	105199	114096	unknown	unknown; similar to Yil176p, Yir041p and other members of
YJL108C	__________	+3.93	113884	447470	unknown	unknown
YKL104C	GFA1______	+4.17	719084	3001370	cell wall biogenesis	chitin biosynthesis
YLR038C	COX12_____	+1.44	365770	527533	oxidative phosphorylation	cytochrome-c oxidase, subunit VIb
YMR145C	__________	+2.16	1427788	3078874	unknown	unknown; similar to rotenone-insensitive NADH-ubiquinone
YNL199C	GCR2______	+1.15	212799	244697	glycolysis	transcriptional activator
YOR315W	__________	+1.43	202580	290347	unknown	unknown
YPR010C	RPA135____	-1.07	1607925	1498615	transcription	RNA polymerase I 135 kD subunit
YBL103C	RTG3______	+1.29	73070	93933	glyoxylate cycle	CIT2 regulator
YCL010C	__________	+1.20	52155	62687	unknown	unknown
YDL107W	MSS2______	+1.01	118437	119242	mRNA splicing, COX1 mRNA	unknown
YDR230W	__________	+1.20	133915	160991	unknown	unknown
YEL011W	GLC3______	+1.62	61760	99973	cell wall biogenesis	glycogen branching enzyme
YFR030W	MET10_____	+1.13	233168	264527	sulfate assimilation	sulfite reductase subunit
YGR033C	__________	-1.01	216955	214443	unknown	unknown
YHR047C	AAP1______	+1.24	126153	157047	protein degradation	arginine/alanine aminopeptidase
YJR074W	MOG1______	+1.26	226174	285760	unknown	unknown; interacts with Gsp1p
YKR071C	__________	-1.68	1405389	834783	unknown	unknown
YML097C	VPS9______	-1.26	337577	268738	vacuolar protein targeting	similar to mammalian ras inhibitors
YNL011C	__________	+1.40	130853	183107	unknown	unknown
YNR050C	LYS9______	-1.59	1374796	866955	lysine biosynthesis	saccharopine dehydrogenase
YOR129C	__________	+1.07	186055	198544	unknown	unknown
YPL105C	__________	-1.19	663431	557277	unknown	unknown; similar to Smy2p
YPR196W	__________	+1.31	183935	240993	unknown	regulates MAL genes (YPD)
YAL024C	LTE1______	+1.18	71202	84284	cell cycle	GDP/GTP exchange factor
YBR188C	NTC20_____	-1.12	140671	125286	mRNA splicing	Prp19p-associated complex protein
YCRX18C	__________	+1.15	57030	65869
YDR059C	UBC5______	+2.78	112856	313383	protein degradation, ubiquitin-mediated	E2 ub.-conjugating enzyme
YDR426C	__________	-1.05	83779	80155	unknown	unknown
YER120W	SCS2______	+1.06	926218	986186	inositol metabolism	regulator of INO1 expression
YGL119W	ABC1______	-1.66	138066	83323	respiration	ubiquinol-cyt.-c reductase assembly protein
YGR226C	__________	-1.07	40660	37841	unknown	unknown
YIL022W	TIM44_____	-1.21	300833	249201	mitochondrial protein targeting	inner membrane translocase component
YJL120W	__________	+1.11	71326	79418	unknown	unknown
YKL116C	__________	+1.34	75940	102071	unknown	putative protein kinase
YLR050C	__________	-1.04	173986	166723	unknown	unknown; similar to C-terminal region of human MAC30
YLR422W	__________	+1.63	247225	402315	unknown	unknown
YMR156C	__________	+1.03	104548	107284	unknown	unknown
YNL211C	__________	-1.34	117474	87661	unknown	unknown
YOL115W	TRF4______	-1.39	176734	127212	mitosis, chromosome condensation	unknown
YOR327C	SNC2______	+1.13	474635	535077	secretion	post-Golgi v-SNARE
YPR022C	__________	+1.22	236345	287326	unknown	unknown
YBR002C	RER2______	-1.28	304301	237756	protein glycosylation	cis-prenytransferase
YCL023C	__________	-1.28	41379	32309	unknown	unknown
YDL119C	__________	+1.04	268597	278914	unknown	unknown
YEL022W	GEA2______	-1.10	333769	303414	secretion	GDP/GTP exchange factor for ARF
YFR039C	__________	-1.33	124999	93639	unknown	unknown
YGR040W	KSS1______	+2.15	88096	188974	pheromone signal transduction	protein kinase
YHR057C	CYP2______	+1.02	357847	365257	protein folding	peptidyl-prolyl cis-trans isomerase
YIR027C	DAL1______	+1.25	64714	80956	allantoin utilization	allantoinase
YJR087W	__________	+1.31	176517	230369	unknown	unknown
YKR083C	__________	-1.36	108697	80034	unknown	unknown; similar to paramyosin
YLR238W	__________	-1.08	112133	103969	unknown	unknown
YML107C	__________	+1.05	160907	168776	unknown	unknown
YNL023C	FAP1______	-1.07	307346	286272	transcription (putative)	FKBP12-binding protein
YNR062C	__________	+1.11	85643	95325	unknown	unknown; similar to Haemophilus influenzae L-lactate
YOR141C	ARP8______	+1.36	78127	106207	cytoskeleton (putative)	actin-related protein
YPL117C	IDI1______	-1.20	821962	683610	isoprenoid biosynthesis	isopentenyl-diphosphate delta-isomerase
YAL034C	FUN19_____	+1.56	86229	134494	unknown	unknown
YBR200W	BEM1______	-1.02	198443	194809	bud emergence	binds Cdc24p
YDR071C	__________	-1.43	871910	608845	unknown	unknown
YDR438W	__________	+1.33	111123	148287	unknown	unknown
YER132C	PMD1______	+1.49	382355	568712	meiosis	gene expression regulator (putative)
YGL131C	__________	+1.40	1162305	1631598	unknown	unknown
YGR238C	KEL2______	+1.02	76418	78317	unknown	unknown; similar to Kel1p and Kel3p
YIL034C	CAP2______	+1.21	337238	407758	cytoskeleton	F-actin capping protein subunit
YJL132W	__________	+2.21	79373	175550	unknown	unknown; similar to phospholipase D
YKL128C	PMU1______	-1.26	290626	230293	unknown	phosphomutase homolog; suppresses ts tps2 mutant
YLR062C	__________	-2.34	2869230	1225607	unknown	unknown
YLR432W	IMD3______	+1.11	3216877	3555478	unknown	unknown; similar to Pur5p and inosine-5'-monophosphate dehydrogenase of human and E. coli
YMR167W	MLH1______	+1.08	157398	170764	DNA repair	MutL homolog; mismatch repair
YNL223W	AUT2______	+1.37	101268	138556	autophagy	microtubule-associated protein (putative)
YOL127W	RPL25_____	-1.89	9536627	5032616	protein synthesis	ribosomal protein L25
YOR339C	UBC11_____	-1.39	171711	123166	protein degradation, ubiquitin-mediated (putative)	homolog of ubiquitin carrier protein E2-C
YPR034W	ARP7______	+1.05	423635	442784	cytoskeleton (putative)	actin-related protein
YBR012W	TY1B______	+1.03	15655132	16168699	unknown	unknown
YCL035C	GRX1______	-2.90	4061679	1400054	oxidative stress response	glutaredoxin
YDR254W	CHL4______	-1.98	824118	416122	mitosis, chromosome segregation	unknown
YEL034W	HYP2______	+1.01	6168565	6226756	protein synthesis	translation initiation factor eIF5A
YFR051C	RET2______	-1.09	1232922	1128629	secretion	vesicle coat component
YGR052W	__________	-1.50	145923	96968	unknown	unknown
YHR068W	DYS1______	+1.07	647789	690977	hypusine biosynthesis	deoxyhypusine synthase
YIR039C	YPS6______	+2.33	90114	210296	protein degradation	GPI-anchored aspartic protease
YJR098C	__________	+1.25	92986	115954	unknown	unknown
YKR095W	MLP1______	-1.06	43721	41137	DNA repair (putative)	myosin-like protein
YLR250W	SSP120____	+1.80	448020	808530	secretion	unknown
YML118W	__________	+1.51	76508	115176	unknown	unknown
YNL035C	__________	-1.04	269513	259439	unknown	unknown
YNR074C	__________	-1.15	55263	48152	unknown	unknown; similar to Bacillus subtilis nitrite reductase
YOR151C	RPB2______	+1.34	721693	965553	transcription	RNA polymerase II 140 kDa subunit
YPL129W	ANC1______	-1.45	840168	578263	transcription	TFIIF 30 kD subunit
YAL044C	GCV3______	-1.69	766744	452565	glycine metabolism	glycine decarboxylase
YBR212W	NGR1______	+1.06	298624	317206	unknown	glucose-repressible RNA-binding protein
YDR083W	__________	-1.80	630326	349795	unknown	unknown
YDR450W	RPS18A____	-2.10	7760853	3695484	protein synthesis	ribosomal protein S18A
YER142C	MAG1______	+1.10	149130	163487	DNA repair	3-methyladenine DNA glycosylase

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YGL143C	MRF1______	+1.11	160444	178306	protein synthesis	mitochondrial peptide chain release factor
YGR250C	__________	+3.58	312507	1118516	unknown	unknown
YIL046W	MET30_____	+2.04	203936	416151	sulfur amino acid metbolism	F-box transcription factor
YJL144W	__________	+5.42	84676	458848	unknown	unknown
YKL140W	TGL1______	+1.10	155095	170038	glycerolipid metabolism	triglyceride lipase-cholesterol esterase
YLR074C	__________	+1.04	610441	635338	unknown	unknown
YLR444C	__________	-1.42	272990	192447	unknown	unknown
YMR177W	MMT1______	+1.09	195896	214085	mitochondrial iron transport	transmembrane domain (4) protein
YNL235C	__________	+1.02	225624	229181	unknown	unknown
YOL139C	CDC33_____	-1.55	2900423	1875313	protein synthesis	translation initiation factor eIF4E
YOR349W	CIN1______	-2.67	150248	56177	mitosis, chromosome segregation	unknown
YPR046W	MCM16_____	-1.31	161664	123303	mitosis,chromosome segregation	unknown
YBR024W	SCO2______	-1.14	35165	30838	respiration	Cox1p and Cox2p stability (putative)
YCL047C	__________	-1.05	143935	136950	unknown	unknown
YDL141W	BPL1______	+1.03	138934	143392	protein processing	biotin:apoprotein ligase
YDR262W	__________	+1.76	283965	499975	unknown	unknown
YEL046C	GLY1______	+1.92	446111	854494	glycine, serine, and threonine metabolism	L-threonine aldolase
YGR064W	__________	-1.25	276532	221468	unknown	unknown
YHR079C	IRE1______	-1.36	49497	36346	protein folding	sensor of unfolded proteins in the ER
YJR110W	__________	+1.24	106752	132665	unknown	unknown
YLR259C	HSP60_____	+1.93	914972	1764424	protein folding	mitochondrial chaperonin
YML130C	ERO1______	+2.32	555197	1288976	protein folding	protein disulfide bond formation in the ER
YNL045W	__________	+1.42	189730	269647	unknown	unknown; similar to leukotriene A4 hydrolases and zinc-containing aminopeptidases
YOR163W	DDP1______	-1.32	482560	366496	dinucleoside polyphosphate metabolism	diadenosine and diphosphoinositol polyphosphate phosphohydrolase
YPL141C	__________	+1.34	376249	504029	unknown	unknown; similar to Kin4p
YAL058W	CNE1______	+1.13	148886	168109	secretion	calnexin and calreticulin homolog
YBR224W	__________	-1.14	34426	30277	unknown	unknown
YDR095C	__________	-1.24	50712	40985	unknown	unknown
YDR462W	MRPL28____	+1.04	151382	158144	protein synthesis	ribosomal protein, mitochondrial L28
YER152C	__________	+1.81	256270	464556	unknown	unknown
YGL155W	CDC43_____	-1.36	175067	128447	protein processing	geranylgeranyltransferase subunit
YGR262C	__________	+1.03	250524	258178	unknown	unknown; similar to apple tree calcium/calmodulin-binding
YIL058W	__________	-1.14	110779	97034	unknown	unknown
YJL156C	SSY5______	+2.08	116726	243218	transport, amino acid (putative)	unknown
YKL152C	GPM1______	-1.03	12056227	11657600	glycolysis	phosphoglycerate mutase
YLR086W	SMC4______	+1.20	166466	199813	mitosis, chromosome condensation and segregation	unknown
YLR456W	__________	-1.15	132672	115022	unknown	unknown
YMR189W	GCV2______	+1.01	65928	66488	amino acid metabolism	glycine decarboxylase P subunit
YNL247W	__________	-1.36	1504334	1110098	protein synthesis	tRNA synthetase, cysteinyl
YOL151W	GRE2______	-1.01	1171807	1158441	unknown	unknown; induced by osmotic stress
YOR361C	PRT1______	-1.01	1240648	1229802	protein synthesis	translation initiation factor eIF3 subunit
YPR058W	YMC1______	-1.33	513835	387019	transport	(putative) mitochondrial carrier
YBR036C	CSG2______	+1.77	600693	1061029	sphingolipid metabolism	mannosylation
YCL059C	KRR1______	-1.92	924590	482197	unknown	essential
YDL153C	SAS10_____	-1.58	768776	487580	silencing	nuclear protein, reulator of silencing at HML, HMR, telomeres
YDR274C	__________	-1.04	133694	128264	unknown	unknown
YEL058W	PCM1______	+2.41	657720	1587543	aminosugars metabolism	phosphoacetylglucosamine mutase
YGR076C	MRPL25____	-1.22	148512	121753	protein synthesis	ribosomal protein, mitochondrial L25
YHR090C	YNG2______	-1.11	139462	125587	chromatin structure	histone acetyltransferase complex subunit
YJR122W	CAF17_____	-1.18	255016	215552	catabolite repression	component of CCR4 transcriptional complex
YLR270W	__________	+1.68	168415	283416	unknown	unknown
YMR009W	__________	+1.75	510360	892273	unknown	unknown; similar to MMSAB operon regulatory protein
YNL055C	POR1______	-1.04	3749116	3609195	transport	mitochondrial outer membrane porin
YOR175C	__________	-1.10	360254	327451	unknown	unknown
YPL153C	RAD53_____	+1.04	67354	69932	cell cycle, checkpoint	protein kinase
YAR002C	ERP1______	-1.47	58609	39910	membrane trafficking; secretion (putative)	unknown
YBR236C	ABD1______	-1.35	294976	218028	mRNA capping	mRNA cap methyltransferase
YDR105C	__________	+1.00	185149	185304	unknown	unknown
YDR474C	__________	+1.51	129971	196704	unknown	unknown
YER162C	RAD4______	+1.30	91668	119329	DNA repair, nucleotide excision	repairosome component
YGL167C	PMR1______	+1.90	113450	215962	transport	Ca(2+) ATPase
YGR274C	TAF145____	+1.47	96591	141679	transcription	TFIID 145 kD subunit
YJL168C	SET2______	+1.16	229241	265895	galactose regulation	transcriptional repressor of Gal4
YKL164C	PIR1______	+3.26	2905900	9459891	unknown	unknown; Pir1p/Hsp150p/Pir3p family
YLR098C	CHA4______	-1.10	54276	49423	ser/thr metabolism	CHA1 activator
YMR200W	ROT1______	+1.51	327512	494506	cytoskeleton	unknown
YNL259C	ATX1______	+1.02	200734	204780	oxidative stress response	unknown
YOL163W	__________	+1.74	63681	111049	unknown	unknown; similar to Pseudomonas putida phthalate transporter
YOR373W	NUD1______	-1.92	102130	53176	chromatin structure	nucleosome assembly protein
YPR070W	MED1______	-1.31	67820	51584	transcription	RNA polymerase II mediator subunit
YBR048W	RPS11B____	-2.20	10938549	4969107	protein synthesis	ribosomal protein S11B
YCL074W	__________	-1.71	245145	143748	unknown	unknown
YDL165W	CDC36_____	-1.16	146984	126443	transcription	general negative regulator
YDR286C	__________	+1.05	131223	138214	unknown	unknown
YEL069C	HXT13_____	+1.36	147355	200132	transport	hexose permease
YGR088W	CTT1______	+1.14	83322	94615	oxidative stress response	catalase T
YHR102W	KIC1______	+1.47	110536	161995	mitosis (putative)	protein kinase; interacts with Cdc31p
YJR134C	SGM1______	+1.39	209015	289811	unknown; growth on galactose or mannose	unknown
YLR282C	__________	-1.11	49716	44795	unknown	unknown
YMR021C	MAC1______	+1.26	232190	292136	metal-dependent gene regulation	transcription factor
YNL067W	RPL9B_____	-1.65	13147881	7964990	protein synthesis	ribosomal protein L9B
YOR187W	TUF1______	+1.24	1022424	1264985	protein synthesis	translation elongation factor Tu, mitochondrial
YPL165C	__________	+1.47	139453	204312	unknown	unknown
YAR023C	__________	-1.11	76356	68521	unknown	unknown; similar to subtelomerically-encoded proteins
YBR248C	HIS7______	-1.31	550578	419006	histidine biosynthesis	glutamine amidotransferase:cyclase
YDR117C	__________	-1.22	218156	179462	unknown	unknown
YDR486C	__________	+1.39	262127	363697	unknown	unknown; similar to Snf7p
YGL179C	__________	+1.31	60794	79455	unknown	putative protein kinase
YGR286C	BIO2______	-1.42	438633	309789	biotin biosynthesis	biotin synthetase
YIL079C	__________	-1.16	371259	319961	unknown	unknown; similar to gag polyprotein
YJL180C	ATP12_____	+1.10	273034	300311	ATP synthesis	F1F0-ATPase complex assembly
YKL176C	LST4______	+1.92	204394	392031	secretion	unknown; involved in secretion of nitroge- regulated permease
YLR110C	__________	+1.22	11877760	14515148	unknown	unknown; similar to Flo1p, Fig2p, Flo5p, Yal063p, and Ykr102p
YMR212C	EFR3______	-1.12	314056	281618	unknown	unknown; similar to myosin heavy chains; null requires PHO85
YNL271C	BNI1______	-1.34	84548	62914	bud site selection, bipolar	interacts with Rho1p
YOR009W	__________	-1.07	686298	642050	unknown	unknown; similar to PAU1 family
YOR385W	__________	+4.36	256927	1119645	unknown	unknown
YPR082C	DIB1______	+1.29	230486	298224	unknown	unknown; similar to S. pombe dim1+
YBR060C	ORC2______	-1.28	246054	191915	DNA replication	origin recognition complex, 72 kD subunit
YCLX10C	__________	-1.64	558455	341266

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YDL177C	__________	-1.41	180788	127954	unknown	unknown
YDR298C	ATP5______	-1.01	1082082	1067219	ATP synthesis	F1F0-ATPase subunit
YER003C	PMI40_____	+1.50	568743	854493	mannose metabolism	mannose-6-phosphate isomerase
YGR100W	MDR1______	+1.06	68624	72443	unknown	unknown
YHR114W	BZZ1______	+1.20	368759	441543	cytoskeleton (putative)	actin assembly complex component
YJR146W	__________	+1.53	121675	186446	unknown	unknown
YLR293C	GSP1______	-1.48	5331052	3604032	nuclear protein targeting	GTP-binding protein, ras superfamily
YMR032W	HOF1______	-1.51	194760	129367	cytokinesis	unknown
YNL079C	TPM1______	+1.41	516351	727018	cytoskeleton	tropomyosin
YOR197W	__________	+1.75	635421	1110563	unknown	unknown
YPL177C	CUP9______	-1.42	514945	362074	Cu2+ ion homeostasis	putative DNA binding protein
YAR044W	OSH1______	+1.60	293248	468869	sterol biosynthesis (putative)	similar to human oxysterol binding protein
YBR260C	RGD1______	+1.04	169735	177217	unknown	GTPase-activating (GAP) protein (putative)
YDR129C	SAC6______	+1.63	584863	955360	cytoskeleton	fimbrin homolog
YDR498C	SEC20_____	+1.01	222007	224055	secretion	unknown; ER membrane protein
YER184C	__________	+2.33	98912	230343	unknown	unknown; similar to transcription factors, has Zn[2]-Cys[6]
YGL191W	COX13_____	+1.39	848403	1177217	oxidative phosphorylation	cytochrome-c oxidase subunit VIa
YIL090W	__________	+1.14	275627	313312	unknown	unknown
YJL192C	__________	+1.08	524911	564673	unknown	unknown; similar to E. coli
YKL188C	PXA2______	+2.41	95837	230875	transport	peroxisomal fatty acid transporter, ABC family
YLR122C	__________	+1.20	50440	60470	unknown	unknown
YNL283C	WSC2______	+1.65	273016	449763	cell wall biogenesis	alpha-1,4-glucan-glucosidase
YOR021C	__________	-1.92	1171847	610383	unknown	unknown
YPR094W	__________	+1.00	223883	224220	unknown	unknown
YBR072W	HSP26_____	-1.22	31196	25613	diauxic shift	stress-induced protein
YCR010C	__________	+1.22	51243	62711	unknown	unknown
YDL189W	__________	+1.34	211981	283242	unknown	unknown
YDR310C	SUM1______	+1.24	65906	81438	silencing	nuclear protein
YER013W	PRP22_____	+1.44	105462	151664	mRNA splicing	RNA helicase
YGR110W	__________	+2.44	69048	168203	unknown	unknown
YHR126C	__________	+1.53	108698	166282	unknown	unknown; similar to members of the Pir1p/Hsp150p/Pir3p
YJR158W	HXT16_____	+1.69	132768	224505	transport	hexose permease
YLR305C	STT4______	+1.81	572174	1035110	signaling, PKC1 pathway	phosphatidylinositol-4-kinase
YMR044W	IOC4______	+1.06	256516	272961	unknown	unknown
YNL091W	__________	+1.99	651958	1296017	unknown	unknown; similar to Uso1p and human NF2 neurofibromatosis
YOR209C	NPT1______	+1.07	1353721	1444462	NAD biosynthesis	nicotinate phosphoribosyltransferase
YPL188W	POS5______	+1.24	332927	411825	unknown	unknown; similar to Utr1p and Yel041p
YBL009W	__________	-1.08	159442	148013	unknown	unknown
YBR272C	HSM3______	+1.53	130352	199175	mismatch repair	unknown; MutS homolog
YDL011C	__________	+2.10	80514	168895	unknown	unknown
YDR141C	DOP1______	+1.17	474666	556840	unknown	unknown; similar to Yps1p and E. nidulans dopA
YDR510W	SMT3______	-1.12	875153	780460	protein degradation	ubiquitin-like protein
YFL009W	CDC4______	+1.01	317534	320802	cell cycle	SCF-Cdc4p complex component
YGL203C	KEX1______	+1.31	347046	454958	secretion	carboxypeptidase (YSC-alpha)
YIL101C	XBP1______	+2.96	88931	263650	stress response	transcriptional repressor
YJL204C	__________	+1.03	408342	419140	unknown	unknown; similar to Tor2p, member of a family of
YKL200C	__________	+1.49	61255	91013
YLR134W	PDC5______	+1.40	7501133	10468887	glycolysis	pyruvate decarboxylase
YMR236W	TAF17_____	+1.14	426627	486697	transcription	TFIID 17 kD subunit
YNL293W	MSB3______	+1.78	165337	294503	unknown	unknown; suppresses bud emergence mutant
YOR033C	DHS1______	+1.04	234070	244158	DNA repair	exonuclease; also recombination
YPL011C	TAF47_____	-1.14	269742	236711	transcription	component of TAF(II) complex
YPR106W	ISR1______	-1.06	201066	189049	staurosporine resistance	protein kinase
YBR084C	RPL19A____	-2.46	12609228	5117585	protein synthesis	ribosomal protein L19A
YCR021C	HSP30_____	-1.23	304129	246765	diauxic shift	plasma membrane heat shock protein
YDL201W	__________	-2.04	306744	150050	unknown	unknown
YDR320C	__________	+1.11	172684	191938	unknown	unknown; similar to human transformation-sensitive
YER023W	PRO3______	-1.93	423253	219710	proline biosynthesis	delta 1-pyrroline-5-carboxylate reductase
YGL011C	SCL1______	-1.54	997857	645912	protein degradation	20S proteasome subunit YC7ALPHA/Y8
YGR122W	__________	-1.25	136132	109081	unknown	unknown
YHR137W	ARO9______	-1.76	855093	486878	aromatic amino acid metabolism	aromatic amino acid aminotransferase II
YJL011C	__________	-1.35	172308	127501	unknown	unknown
YKL010C	UFD4______	-1.31	54814	41798	protein degradation, ubiquitin-mediated	unknown; may influence multi-Ub chain topology
YLL011W	SOF1______	-1.47	430368	291867	rRNA processing	nucleolar snRNP protein
YLR316C	TAD3______	-1.25	179028	143656	tRNA processing	tRNA-specific adenosine deaminase subunit
YMR053C	STB2______	+1.53	80524	123131	unknown	binds Sin3p
YNL103W	MET4______	+1.03	366847	376054	sulfur amino acid metabolism	transcriptional activator
YOL011W	PLB3______	+2.34	239198	558548	phospholipid metabolism	phospholipase B
YOR221C	MCT1______	+1.30	241420	313612	fatty acid metabolism	malonyl-CoA:ACP transferase
YPL200W	__________	+1.09	44307	48257	unknown	unknown
YAR070C	__________	+1.76	60899	107433	unknown	unknown
YBL021C	HAP3______	+1.04	134633	139390	transcription	component of heterotrimeric CCAAT-binding factor
YBR284W	__________	+4.72	44609	210557	unknown	unknown; similar to AMP deaminase
YDL023C	__________	+1.83	65494	119776	unknown	unknown
YDR153C	__________	+1.28	170491	218105	unknown	unknown
YDR522C	SPS2______	+1.34	49426	66133	meiosis	unknown
YGL215W	CLG1______	-1.02	617762	604218	cell cycle	cyclin-like (Pho85p)
YHL019C	APM2______	+1.18	102767	121583	endocytosis	AP-2 complex subunit
YIL113W	__________	+1.02	51993	52925	unknown	protein phosphatase
YJL216C	__________	+1.06	63870	67598	unknown	unknown; similar to Mal62p (glucosidase P1)
YKL212W	SAC1______	+1.44	427792	618020	secretion	ER/Golgi ATP/ADP exchanger
YLR146C	SPE4______	-1.08	223799	207308	spermine biosynthesis	spermine synthase
YML020W	__________	+1.28	104968	134175	unknown	unknown
YMR247C	__________	+1.03	543671	561871	unknown	unknown
YNL305C	__________	+1.83	261672	480079	unknown	unknown; similar to Aspergillus nidulans negative-acting
YOR045W	TOM6______	-1.21	395552	325738	mitochondrial protein targeting	outer membrane translocase component
YPL023C	MET12_____	+1.13	321489	364122	methionine biosynthesis	methylenetetrahydrofolate reductase
YPR118W	__________	-1.33	865686	650057	unknown	unknown
YBR094W	__________	-2.20	634990	289164	unknown	unknown; similar to Mec1p and porcine tubulin-tyrosine
YCR031C	RPS14A____	-1.42	5667882	3982126	protein synthesis	ribosomal protein S14A
YDL213C	__________	-2.14	912006	425995	unknown	unknown
YDR332W	__________	+1.03	117681	121586	unknown	unknown; similar to DEAD box family helicases
YER035W	EDC2______	+1.42	173193	246089	mRNA processing	unknown; genetic interaction with dcp2-7
YGL023C	PIB2______	+1.22	154400	187865	signaling (putative)	unknown; binds phosphatidylinositol 3-phosphate
YGR134W	__________	-1.24	49457	39765	unknown	unknown
YHR147C	MRPL6_____	-2.60	323039	124067	protein synthesis	ribosomal protein, mitochondrial L6
YJL023C	PET130____	+1.16	127352	148066	protein synthesis, mitochondrial	unknown
YKL022C	CDC16_____	+1.19	144670	171809	cell cycle	anaphase-promoting complex subunit
YLL023C	__________	-1.15	279636	242314	unknown	unknown
YLR328W	__________	-1.05	212880	202550	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YMR065W	KAR5______	-1.22	134926	110173	mating; nuclear fusion	coiled-coil membrane protein
YNL115C	__________	+2.10	111213	234018	unknown	unknown
YOL023W	IFM1______	-1.04	120454	115420	protein synthesis	translation initiation factor 2, mitochondrial
YOR233W	KIN4______	-1.00	351757	350190	unknown	protein kinase
YPL212C	PUS1______	-1.25	620512	495313	tRNA processing	pseudouridine synthase
YBL033C	RIB1______	+1.05	33109	34725	flavin biosynthesis	GTP cyclohydrolase II
YBR296C	PHO89_____	+1.26	84223	106226	phosphate metabolism	Na+/Pi symporter
YDL035C	GPR1______	+1.85	207040	384031	signaling, pheromone pathway	G-protein coupled receptor, coupled to Gpa2p
YDR165W	__________	-1.95	774509	397523	unknown	unknown
YDR534C	__________	+1.16	82265	95615	unknown	unknown
YFL028C	CAF16_____	-1.05	290024	276535	transport	ATP-binding cassette (ABC) family
YGL226W	__________	+1.05	109435	114668	unknown	unknown; similar to Neurospora cytochrome-c oxidase
YIL125W	KGD1______	+2.11	149189	315093	respiration	alpha-ketoglutarate dehydrogenase
YJR004C	SAG1______	+1.13	302467	342352	mating	alpha-agglutinin
YKL224C	__________	+2.49	156824	389778	unknown	unknown; similar to Ybr301p, member of the PAU1 family
YML031W	NDC1______	+1.15	367569	423899	cytoskeleton	spindle pole body duplication
YMR260C	TIF11_____	-1.81	3237737	1792138	protein synthesis	translation initiation factor eIF1a
YNL317W	PFS2______	-1.07	298064	279065	mRNA processing	polyadenylation factor subunit
YOR057W	SGT1______	+1.14	269589	308135	mitosis (putative)	unknown; suppresses skp1 mutation
YPL035C	__________	+1.05	140840	147902	unknown	unknown
YPR130C	__________	-1.45	504275	348758	unknown	unknown
YBR106W	PHO88_____	-1.60	2863620	1791106	phosphate transport	regulator of Pho81
YCR043C	__________	-2.53	475359	187730	unknown	unknown
YDL225W	SHS1______	-1.18	291246	246525	cytokinesis	septin (putative)
YDR344C	__________	-1.21	73819	61078	unknown	unknown
YER045C	__________	+2.09	244429	511521	unknown	unknown
YGL035C	MIG1______	-1.28	137175	106862	glucose repression	transcriptional repressor
YGR146C	__________	+2.10	203474	428312	unknown	unknown
YHR159W	__________	+1.09	65360	71087	unknown	unknown
YJL035C	TAD2______	+1.31	144186	188379	tRNA processing	tRNA-specific adenosine deaminase subunit
YLL035W	GRC3______	+1.11	242240	269380	unknown	unknown; essential
YLR340W	RPP0______	-1.22	11961154	9812711	protein synthesis	ribosomal protein L10, acidic
YMR076C	PDS5______	+1.09	548080	597041	mitosis, sister chromatid cohesion	unknown
YNL127W	__________	+1.22	131844	161460	unknown	unknown; similar to Fus2p
YOL035C	__________	+1.09	294050	320984	unknown	unknown
YOR245C	__________	+1.20	255614	307655	unknown	unknown
YPL224C	MMT2______	+1.14	200099	227384	mitochondrial ion transport	transmembrane domain (2) protein
YBL045C	COR1______	+1.27	906282	1153197	oxidative phosphorylation	ubiquinol cytochrome-c reductase
YDL047W	SIT4______	+1.18	329401	387932	cell cycle	type 2A related protein phosphatase
YDR175C	__________	-1.16	156335	134693	unknown	unknown
YFL038C	YPT1______	-1.40	572439	409551	secretion	rab GTPase; ER-to-Golgi
YGL238W	CSE1______	+1.03	701924	725306	mitosis, chromosome segregation	kinetochore protein (putative)
YHL042W	__________	-1.05	102608	97485	unknown	unknown; similar to subtelomerically-encoded proteins
YIL137C	__________	+1.11	140516	156672	unknown	unknown; similar to aminopeptidases
YJR015W	__________	+1.28	267891	343996	unknown	unknown; similar to Sng1p and multidrug resistance proteins
YKR011C	__________	+1.58	108585	171254	unknown	unknown
YLR168C	(MSF1)____	+1.11	159758	177378	unknown	intramitochondrial protein sorting (putative)
YML041C	__________	-1.09	185739	170610	unknown	unknown
YMR272C	SCS7______	+1.03	525730	540164	fatty acid metabolism	ceramide hydroxylase
YNL329C	PEX6______	+1.11	284880	317619	peroxisome biogenesis	ATPase (putative)
YOR069W	VPS5______	+1.21	249728	303032	vacuolar protein targeting	sorting nexin family
YPL047W	__________	+1.19	334955	400092	unknown	unknown
YPR140W	__________	-1.03	271560	264920	unknown	unknown; similar to human Barth syndrome gene tafazzin
YBR117C	TKL2______	+1.01	164045	165102	pentose phosphate cycle	transketolase
YCR055C	__________	-1.53	471310	308581
YDL237W	__________	+1.08	222130	239116	unknown	unknown
YDR356W	NUF1______	-1.09	114740	105693	cytoskeleton	spindle pole body component
YER056C	FCY2______	-1.70	6127648	3608597	transport	purine-cytosine permease
YGL047W	__________	-2.21	296094	134108	unknown	unknown; similar to Plasmodium falciparum gametocytogenesis
YGR158C	MTR3______	-1.27	333118	262405	mRNA transport	nucleolar protein
YHR171W	APG7______	+1.25	81510	101539	autophagy	unknown; similar to ubiquitin-activating enzymes
YJL048C	__________	+2.49	392814	976684	unknown	unknown
YKL045W	PRI2______	+1.60	137820	220631	DNA replication	polymerase alpha 58 kD subunit (DNA primase)
YLL047W	__________	+1.17	56071	65875	unknown	unknown
YLR352W	__________	+1.22	82317	100317	unknown	unknown
YMR087W	__________	+1.18	171379	201473	unknown	unknown
YNL139C	RLR1______	+1.38	396889	548782	transcription	pleiotropic regulatory protein
YOL047C	__________	+1.65	71578	118281	unknown	unknown
YOR257W	CDC31_____	+1.06	297455	314829	cytoskeleton	spindle pole body component
YPL236C	__________	+1.16	72889	84383	unknown	unknown
YBL057C	__________	-1.59	337660	211977	unknown	unknown
YDL059C	RAD59_____	+1.34	78262	104580	DNA repair and recombination	unknown
YDR186C	__________	+1.70	161961	275395	unknown	unknown
YFL050C	ALR2______	+1.14	62948	71465	aluminum resistance	ion transporter (putative)
YGL250W	__________	+1.39	67613	94090	unknown	unknown
YHR002W	__________	+1.78	137613	245559	unknown	unknown; similar to Grave's disease protein; mitochondrial carrier (MCF) family
YIL149C	MLP2______	-1.18	547574	462364	nuclear protein targeting (putative)	unknown; similar to Mlp1p
YJR026W	__________	+2.26	6251087	14150616	unknown	unknown; similar to Hyr1p, Ybr244p, and glutathione peroxidases
YKR023W	__________	+1.02	270967	275036	unknown	unknown
YLR180W	SAM1______	-1.06	1760956	1661144	methionine metabolism	S-adenosylmethionine synthetase
YML051W	GAL80_____	+1.17	308260	359482	galactose regulation	transcriptional repressor
YMR284W	YKU70_____	+1.16	89967	103966	DNA repair	DNA binding; Ku70 homolog
YNR002C	FUN34_____	+1.84	83159	153226	unknown	unknown
YOR081C	__________	+1.57	161015	252137	unknown	unknown
YPL059W	GRX5______	-1.02	476896	468851	oxidative stres response	glutaredoxin
YPR152C	__________	+1.41	77547	109707	unknown	unknown; similar to Ykl012p
YBR129C	OPY1______	-1.08	193186	178616	mating	unknown
YCR067C	SED4______	+1.21	291265	351476	secretion	ER vesicle formation
YDR001C	NTH1______	+2.55	316829	807787	trehalose metabolism	alpha, alpha-trehalase
YDR366C	__________	-1.47	7028104	4790515	unknown	unknown
YER066W	__________	-1.17	189402	161400	unknown	unknown; similar to Cdc4p, has one WD (WD-40) domain
YGL059W	__________	+1.01	132682	133549	unknown	unknown; similar to Rat branched-chain alpha-ketoacid
YGR166W	KRE11_____	+2.61	206184	537803	cell wall biogenesis	regulates beta-1,6-glucan synthesis
YHR183W	GND1______	+1.29	2852546	3692314	pentose phosphate cycle	6-phosphogluconate dehydrogenase, decarboxylating
YJL060W	__________	+2.41	238308	573551	unknown	unknown; similar to kynurenine aminotransferase
YKL057C	NUP120____	+1.20	157903	189095	nuclear protein targeting	nuclear pore protein
YLL059C	__________	+1.03	50588	52236	unknown	unknown
YLR364W	__________	+1.55	58713	91014	unknown	unknown; similar to yeast glutaredoxin-like protein
YMR099C	__________	+1.11	718287	798145	unknown	unknown
YNL151C	RPC31_____	-1.62	721954	444641	transcription	RNA polymerase III 31 kD subunit

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YOL057W	__________	+1.03	435931	450405	unknown	unknown
YOR269W	PAC1______	+1.01	149019	150187	cytoskeleton (putative)	unknown; required in the absence of Cin8p
YPL248C	GAL4______	+1.21	62825	75784	galactose regulation	transcriptional activator
YBL069W	AST1______	-1.25	286650	229054	plasma membrane protein targeting	targets plasma membrane ATPase
YDL071C	__________	+1.30	49497	64315	unknown	unknown
YDR198C	__________	-1.02	183911	179435	unknown	unknown
YFL062W	COS4______	+2.96	1059463	3131066	unknown	unknown; similar to subtelomerically-encoded proteins
YGL262W	__________	-1.44	79799	55454	unknown	unknown
YHR013C	ARD1______	-1.58	598114	378498	protein processing	protein N-acetyltransferase subunit
YIL160C	POT1______	+1.25	68861	86283	fatty acid metabolism	peroxisomal 3-oxoacyl CoA thiolase
YJR038C	__________	-1.00	51801	51757	unknown	unknown
YKR035C	__________	+1.02	390017	398594	unknown	unknown
YLR192C	HCR1______	-1.30	728221	558379	unknown	unknown; high copy suppressor of rpg1
YML062C	MFT1______	-1.10	257788	235022	mitochondrial protein targeting	mitochondrial targeting protein
YNR014W	__________	-1.07	149535	140026	unknown	unknown
YOR093C	__________	+1.16	245595	285789	unknown	unknown
YPL069C	BTS1______	-1.15	245418	213423	protein processing	geranylgeranyl diphosphate synthase
YPR160W	GPH1______	+1.02	55609	56782	glycogen metabolism	glycogen phosphorylase
YBR141C	__________	-1.34	189695	141955	unknown	unknown
YCR079W	__________	+1.67	94932	158131	unknown	protein phosphatase
YDR013W	__________	+1.02	70468	71597	unknown	unknown
YDR378C	LSM6______	-1.14	286139	250214	mRNA splicing (putative)	unknown; similar to snRNA-associated protein
YER075C	PTP3______	+1.03	204059	209867	signaling, pheromone and high osmolarity pathways	protein tyrosine phosphatase
YGL071W	RCS1______	-1.27	47996	37864	iron transport	transcriptional activator
YGR178C	PBP1______	+1.36	516098	699898	mRNA processing	poly(A)-binding protein binding protein
YHR195W	NVJ1______	-1.04	246948	236679	vacuolar protein targeting (putative)	unknown; Vac8p binding protein
YJL072C	__________	-1.30	180694	138791	unknown	unknown
YKL069W	__________	-1.01	226041	223812	unknown	unknown
YLR004C	__________	+1.15	144427	166768	unknown	unknown; similar to allantoate transport protein
YLR376C	__________	-1.15	68136	59481	unknown	unknown
YMR111C	__________	+1.10	79392	87412	unknown	unknown; similar to Msn1p
YNL163C	__________	+1.19	184700	218912	protein synthesis	translation elongation factor eEF4
YOL069W	NUF2______	-1.03	169015	163510	cytoskeleton	spindle pole body component
YOR281C	PLP2______	-1.55	688236	443238	unknown	unknown; similar to phosducins
YMR326C	__________	-1.01	62211	61801	unknown	unknown; similar to members of the PAU1 family
YBL081W	__________	+1.02	413403	423730	unknown	37% identity to Drosophila l not protein
YDL083C	RPS16B____	-2.12	7740475	3646543	protein synthesis	ribosomal protein S16B
YDR210W	__________	+1.11	735545	813684	unknown	unknown
YFR006W	__________	-1.06	730354	687488	unknown	unknown; similar to human X-pro dipeptidase
YGR011W	__________	-1.32	224446	170645	unknown	unknown
YHR024C	MAS2______	+1.02	419726	428835	protein processing	mitochondrial processing protease subunit
YJR050W	ISY1______	+1.11	212714	237042	mRNA splicing	unknown; interacts with spliceosome
YKR047W	__________	-1.01	865965	854074	unknown	unknown
YLR204W	QRI5______	-1.13	283025	250473	unknown	unknown
YML074C	NPI46_____	-1.59	2457741	1548325	protein folding	peptidyl-prolyl cis-trans isomerase
YMR305C	SCW10_____	+3.41	2197666	7488639	cell wall biogenesis	glucanase (putative)
YNR026C	SEC12_____	+1.24	359180	444411	secretion	ER-to-Golgi GDP/GTP exchange factor
YOR105W	__________	-1.23	311853	252841	unknown	unknown
YPL081W	RPS9A_____	-2.08	9112936	4372281	protein synthesis	ribosomal protein S9A
YPR172W	__________	-1.14	132602	116644	unknown	unknown
YBR153W	RIB7______	-1.10	250332	227279	flavin biosynthesis	HTP reductase
YCR090C	__________	-2.36	418556	177156	unknown	unknown
YDR025W	RPS11A____	-2.09	9868912	4711877	protein synthesis	ribosomal protein S11A
YDR390C	UBA2______	-1.83	470072	256982	protein degradation, ubiquitin-mediated	E1-like (ub.-activating) enzyme
YER087C	SBH1______	-1.08	589529	543804	secretion	ER protein translocation complex subunit
YGL083W	SCY1______	-1.54	132011	85542	unknown	unknown
YGR190C	__________	+1.42	66368	94209	unknown	unknown
YHR207C	__________	+1.07	232217	248991	unknown	unknown
YJL084C	__________	+1.35	223107	301958	unknown	unknown
YKL081W	TEF4______	-1.27	2740367	2165770	protein synthesis	translation elongation factor EF-1gamma
YLR016C	__________	+1.22	152286	186038	unknown	unknown
YLR388W	RPS29A____	-1.85	3628043	1960573	protein synthesis	ribosomal protein S29A
YMR122C	__________	-1.52	83286	54840	unknown	unknown
YNL175C	NOP13_____	-2.37	1444820	608413	unknown	unknown; nucleolar protein
YOL081W	IRA2______	-2.10	166509	79297	signaling, Ras pathway	GTPase-activating protein for Ras1p and Ras2p
YOR293W	RPS10A____	-2.86	11002858	3845449	protein synthesis	ribosomal protein S10A
YPL269W	KAR9______	-1.24	142294	114462	cytoskeleton	cytoplasmic microtubule orientation
YBL093C	ROX3______	+1.12	241414	269872	transcription	RNA polymerase mediator subunit
YDL095W	PMT1______	+1.17	252195	295375	protein glycosylation	dolichyl phosphate-D-mannose:protein O-D-mannosyltransferase
YDR218C	SPR28_____	-1.17	69911	59706	sporulation	septin-related protein
YFR018C	__________	+1.68	90283	151757	unknown	unknown; similar to human glutaminyl-peptide
YGR023W	MTL1______	-1.32	193081	146566	signaling (putative)	unknown; acts with Mid2p
YHR036W	__________	+1.34	179635	241478	unknown	unknown
YIR006C	PAN1______	-1.04	91641	88448	cytoskeleton and endocytosis	actin filament organization
YJR062C	NTA1______	+1.09	53008	57894	protein degradation	amino-terminal amidase
YKR059W	TIF1______	-1.27	12978359	10211632	protein synthesis	translation initiation factor eIF4A
YLR216C	CPR6______	+2.36	457641	1082184	protein folding (putative)	peptidyl-prolyl cus-trans isomerase
YMR316W	DIA1______	+4.35	334800	1454908	pseudohyphal growth (putative)	unknown
YNR038W	DBP6______	-1.22	350375	286471	rRNA processing	RNA helicase, putative
YOR117W	RPT5______	+1.27	952197	1204677	protein degradation	26S proteasome regulatory subunit
YPL093W	NOG1______	+1.15	1162256	1342234	unknown	nucleolar G protein
YPR184W	GDB1______	+1.02	70270	71943	glycogen utilization	glycogen debranching enzyme
YBR164C	ARL1______	-2.09	534856	256474	secretion	ADP-ribosylation factor-like protein
YCR101C	__________	+1.59	63137	100560	unknown	unknown; similar to Pep1p, probably represents a fragmented coding region of a pseudogene
YDR035W	ARO3______	+1.18	831628	977661	aromatic amino acid biosynthesis	DAHP synthase
YDR402C	DIT2______	-1.84	83775	45550	sporulation, spore wall biogenesis	synthesizes dityrosine
YER097W	__________	+1.47	41866	61718	unknown	unknown
YGL095C	VPS45_____	-1.07	192664	179557	vacuolar protein targeting	membrane protein
YGR202C	PCT1______	+1.05	280607	294223	phospholipid metabolism	cholinephosphate cytidylyltransferase
YHR216W	IMD2______	-1.00	4790470	4769187	purine biosynthesis	IMP dehydrogenase
YJL096W	MRPL49____	-1.34	364968	272415	protein synthesis	ribosomal protein, mitochondrial L49
YKL093W	MBR1______	+2.31	111080	256540	mitochondrial biogenesis	unknown
YLR028C	ADE16_____	+2.41	369954	892905	purine biosynthesis	5-aminoimidazole-4-carboxamide ribonucleotide (AICAR) transformylase/IMP cyclohydrolase
YLR400W	__________	-1.40	211527	151440	unknown	unknown
YMR134W	__________	-1.08	269207	249572	unknown	unknown
YNL187W	__________	+1.25	88330	110714	unknown	unknown
YOL093W	__________	-1.45	537438	370810	unknown	unknown
YOR304W	ISW2______	-1.05	743941	708859	unknown	unknown; similar to Drosophila nucleosome remodeling factor ISW1
YPL281C	ERR2______	-1.15	110261	95611	unknown	unknown; similar to enolase
YAL013W	DEP1______	+1.48	111403	164363	phospholipid metabolism	regulator

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YBR177C	EHT1______	+1.08	155151	167323	unknown	alcohol acyl transferase (putative)
YCRX07W	__________	+1.17	49820	58299
YDR048C	__________	+1.35	38911	52555	unknown	unknown
YDR415C	__________	-1.04	154930	148722	unknown	unknown; similar to bacterial leucyl aminopeptidase
YER110C	KAP123____	-1.33	365589	274820	nuclear protein targeting	beta-karyopherin
YGL108C	__________	-1.07	121960	113669	unknown	unknown
YGR215W	__________	-1.19	234044	196744	unknown	unknown
YIL012W	__________	+1.16	41349	48021	unknown	unknown
YJL109C	__________	+1.82	377637	686418	unknown	unknown
YKL105C	__________	+2.43	133145	324183	unknown	unknown
YLR039C	RIC1______	+1.27	54486	69170	transcription	(putative) transcriptional regulator of rRNA and proteins
YLR411W	CTR3______	+1.19	29772	35476	transport	copper transporter
YMR146C	TIF34_____	-1.30	2034754	1564790	protein synthesis	translation initiation factor eIF3, P39 subunit
YNL200C	__________	+1.17	128830	150517	unknown	unknown
YOL104C	NDJ1______	+1.87	108778	202897	meiosis, chromosome segregation	unknown
YOR316C	COT1______	-1.02	307097	299845	Co2+ ion homeostasis	mitochondrial membrane protein
YPR011C	__________	+2.08	158925	330731	unknown	unknown; similar to human Grave's disease carrier protein
YBL104C	__________	+1.01	161418	163422	unknown	morphology (putative)
YCL011C	GBP2______	+1.12	339354	379894	unknown	telomere-associated protein (putative)
YDL108W	KIN28_____	+1.06	231165	245251	transcription	protein kinase; also TFIIH subunit
YDR231C	COX20_____	+1.53	182894	279987	respiration	req. for cytochrome oxidase assembly
YEL012W	UBC8______	+1.22	163928	199784	protein degradation, ubiquitin-mediated	E2 ub.-conjugating enzyme
YFR031C	SMC2______	-1.15	13610190	11822032	mitosis, chromosome condensation and segregation	unknown
YGR034W	RPL26B____	-2.71	9788787	3618178	protein synthesis	ribosomal protein L26B
YHR048W	__________	-3.21	266589	83119	unknown	major facilitator superfamily
YIR018W	YAP5______	-1.01	54886	54082	transcription	basic leu zipper transcription factor
YJR075W	HOC1______	+1.33	310576	411684	protein glycosylation	putative mannosyltransferase
YKR072C	SIS2______	-1.02	547392	537791	cell cycle and ion homeostasis	unknown
YML098W	TAF19_____	+1.02	255083	261454	transcription	TFIID 19 kD subunit
YNL012W	SPO1______	+1.53	99930	152891	meiosis (spor.)	transcriptional regulator
YNR051C	BRE5______	-1.12	677107	605298	secretion (putative)	unknown; brefeldin A sensitive
YOR130C	ORT1______	-1.47	226557	153702	arginine biosynthesis	amino acid transporter
YPL106C	SSE1______	+1.05	2499004	2634743	calmodulin signaling	HSP70 family
YPR197C	__________	+2.33	105827	246795	unknown	unknown
YAL025C	MAK16_____	-1.80	548537	304586	dsRNA virus propagation	unknown; essential gene
YBR189W	RPS9B_____	-1.88	7083878	3768685	protein synthesis	ribosomal protein S9B
YCRX19W	__________	-4.58	433370	94571
YDR060W	__________	-1.04	673985	649208	unknown	unknown; similar to human CCAAT-binding protein (GB:Z49209)
YDR427W	RPN9______	-1.07	622669	583366	protein degradation	26S proteasome regulatory subunit
YER121W	__________	-1.74	141474	81471	unknown	unknown
YGL120C	PRP43_____	-1.02	259100	253467	mRNA splicing	spliceosome disassembly factor; RNA helicase
YGR227W	DIE2______	-1.22	82565	67569	glucosylation?	glucosyltransferase
YIL023C	__________	+4.53	231817	1049639	unknown	unknown; similar to Atx2
YJL121C	RPE1______	+1.03	773233	794131	pentose phosphate cycle	Ribulose-5-phosphate 3-epimerase
YKL117W	SBA1______	-1.22	2113500	1727029	protein folding	Hsp90 associated co-chaperone
YLR051C	__________	-1.09	294745	269675	unknown	unknown
YLR423C	APG17_____	+1.24	97087	120115	unknown	unknown; similar to human cytokeratin 9 (SP:P35527)
YMR157C	__________	-1.28	191387	149882	unknown	unknown
YNL212W	VID27_____	+1.02	356908	363626	vacuolar protein targeting (putative)	unknown
YOL116W	MSN1______	-1.02	167892	165053	nutrient sensing	transcriptional activator
YOR328W	PDR10_____	+2.00	163993	328291	transport	ATP-binding cassette (ABC) family
YPR023C	EAF3______	+1.55	398303	616669	unknown	acetyltrasnferase complex component (putative)
YBR003W	COQ1______	+1.18	166969	197774	ubiquinone biosynthesis	exaprenyl pyrophosphate synthetase
YCL024W	KCC4______	+1.62	39680	64453	bud growth	protein kinase
YDL120W	YFH1______	+1.66	167816	278007	iron homeostasis, mitochondrial	frataxin homolog
YEL023C	__________	+1.46	41167	60211	unknown	unknown
YFR040W	SAP155____	+1.55	203558	315215	cell cycle	Sit4p-associated protein
YGR041W	BUD9______	-1.16	178014	153123	bud site selection, bipolar	unknown
YHR058C	MED6______	-1.12	151415	135246	transcription	RNA polymerase II mediator subunit
YIR028W	DAL4______	+3.18	88744	282468	allantoin utilization	allantoin permease
YJR088C	__________	+1.20	250399	299702	unknown	unknown
YKR084C	HBS1______	-1.03	272777	265272	unknown	unknown; similar to translation elongation factor EF-1alpha
YLR239C	__________	-1.31	169306	129613	unknown	unknown; similar to E. coli LipB protein which is
YML108W	__________	-1.28	289369	226769	unknown	unknown
YNL024C	__________	-1.40	187770	134583	unknown	unknown
YNR063W	__________	+1.69	78905	133062	unknown	unknown; similar to transcription factors, has Zn[2]-Cys[6]
YOR142W	LSC1______	+1.33	606244	803677	TCA cycle	succinyl-CoA ligase alpha subunit
YPL118W	MRP51_____	-1.16	558707	483549	protein synthesis	ribosomal protein, mitochondrial small subunit
YBR201W	DER1______	-1.05	90885	86173	protein degradation, ER	unknown
YDR072C	IPT1______	+1.02	365798	373371	sphingolipid biosynthesis	inositolphosphotransferase 1
YDR439W	LRS4______	+1.04	122658	127145	silencing (rDNA) (putative)	unknown
YER133W	GLC7______	-1.01	750955	743042	glycogen metabolism	protein phosphatase
YGL132W	__________	+1.21	62107	75211	unknown	unknown
YGR239C	PEX21_____	+1.08	358936	388001	peroxisome biogenesis (putative)	unknown, "peroxin"
YIL035C	CKA1______	-1.27	458974	362249	cell cycle (putative)	casein kinase II, catalytic subunit
YJL133W	MRS3______	+1.47	357479	526705	transport	mitochondrial carrier
YKL129C	MYO3______	+1.51	61741	93032	cytoskeleton	myosin, class I
YLR063W	__________	+1.07	51749	55284	unknown	unknown
YLR433C	CNA1______	+1.37	136802	187907	signaling	calcineurin catalytic A subunit
YMR168C	CEP3______	+1.19	184821	219666	mitosis	kinetochore protein complex, 71 KD subunit
YNL224C	__________	+1.11	261301	290158	unknown	unknown
YOL128C	__________	+1.06	146613	155244	unknown	protein kinase
YOR340C	RPA43_____	-1.57	761861	484476	transcription	RNA polymerase I 36 kD subunit
YPR035W	GLN1______	-1.14	7566069	6653906	glutamine biosynthesis	glutamine synthetase
YBR013C	__________	+1.20	51974	62523	unknown	unknown
YCL036W	__________	-1.62	248830	154032	unknown	unknown
YDL131W	LYS21_____	-2.24	1465096	652999	lysine biosynthesis	homocitrate synthase
YDR255C	__________	-1.06	86246	81610	unknown	unknown
YEL035C	UTR5______	+1.18	39177	46071	unknown	unknown
YFR052W	RPN12_____	+1.10	537649	590064	protein degradation	26S proteasome regulatory subunit
YGR053C	__________	-1.10	59075	53603	unknown	unknown
YHR069C	RRP4______	-1.01	489320	485699	rRNA processing	3'->5' exoribonuclease
YIR040C	__________	+2.25	77511	174778	unknown	unknown; similar to Yil174p, Yil175p, and Ycr103p, member of
YJR099W	YUH1______	+1.13	176059	199250	protein degradation, ubiquitin-mediated	ubiquitin-specific protease
YKR096W	__________	+1.06	36559	38935	unknown	unknown; similar to aldehyde dehydrogenase
YLR251W	__________	+1.45	67335	97442	unknown	unknown; similar to mouse MPV17 protein
YML119W	__________	-1.46	358800	246462	unknown	unknown
YNR075W	COS10_____	+1.08	76145	82250	unknown	unknown; similar to subtelomerically-encoded proteins
YOR152C	__________	+1.69	153386	259523	unknown	unknown
YPL130W	SPO19_____	-1.09	49842	45891	sporulaiton	GPI-protein, meiosis-specific

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YAL045C	__________	-1.20	195160	162621	unknown	unknown
YBR213W	MET8______	+1.20	100013	120226	sulfate assimilation	siroheme synthase
YDR084C	__________	-1.10	136786	124220	unknown	unknown
YDR451C	__________	+1.48	92522	136948	unknown	unknown; similar to Yox1p, which binds Leu-tRNA (SP:P34161)
YER143W	DDI1______	+1.45	164117	237819	unknown	unknown; induced by DNA damage
YGL144C	__________	+1.10	50591	55723	unknown	unknown
YGR251W	__________	-1.31	199610	152277	unknown	unknown
YIL047C	SYG1______	+1.23	333704	409383	signaling (putative)	pheromone pathway
YJL145W	__________	+1.22	376947	459274	unknown	unknown
YKL141W	SDH3______	+1.16	257428	298441	TCA cycle, oxidative phosphorylation	succinate dehydrogenase cytochrome b
YLR075W	RPL10_____	-1.20	11957189	9970548	protein synthesis	ribosomal protein L10
YLR445W	__________	-2.70	202232	74770	unknown	unknown
YMR178W	__________	-1.10	373146	339638	unknown	unknown
YNL236W	SIN4______	+1.05	312663	329704	transcription	RNA polymerase II mediator subunit
YOL140W	ARG8______	-1.28	377945	296361	arginine biosynthesis	acetylornithine aminotransferase
YOR350C	MNE1______	+1.28	150998	192870	unknown	unknown; similar to Lucilia illustris mitochondria cytochrome oxidase
YPR047W	MSF1______	+1.31	123046	160736	protein synthesis	tRNA synthetase, mitochondrial, phenylalanyl, subunit
YBR025C	__________	-1.35	2367943	1756953	unknown	unknown
YCL048W	__________	-1.69	83469	49277	unknown	unknown; similar to Ecm33p and Sps2p
YDL142C	CRD1______	+1.14	124191	142057	lipid biosynthesis	cardiolipin synthase
YDR263C	DIN7______	-1.04	102192	98235	DNA repair (putative)	DNA damage-inducible
YEL047C	__________	+1.28	348650	447925	unknown	putative fumarate reductase
YGR065C	VHT1______	-1.20	257911	214220	transport	H+-biotin symporter
YHR079C	SAE3______	+1.16	214135	249201	meiosis, recombination	unknown
YJR111C	__________	-1.26	240466	190916	unknown	unknown
YLR260W	LCB5______	+1.80	192991	346581	sphingolipid metabolism	long chain base kinase
YML131W	__________	+1.27	1028575	1307678	unknown	unknown
YNL046W	__________	-1.20	415695	347527	unknown	unknown
YOR164C	__________	-1.62	523729	323509	unknown	unknown
YPL142C	__________	-2.25	8845445	3930361	unknown	unknown
YAL059W	ECM1______	-2.07	509593	245637	cell wall biogenesis	unknown
YBR225W	__________	+1.19	87219	103823	unknown	unknown
YDR096W	GIS1______	+1.17	86995	102218	unknown	unknown
YDR463W	STP1______	+1.14	231545	263797	tRNA splicing	transcription
YER153C	PET122____	+1.16	40467	47024	protein synthesis	translation activator of COX3
YGL156W	AMS1______	-1.15	106931	93387	cell wall catabolism	vacuolar alpha-mannosidase
YGR263C	__________	-1.09	121001	111176	unknown	unknown
YIL059C	__________	-1.11	129485	117016	unknown	unknown
YJL157C	FAR1______	+1.13	190096	213983	cell cycle	Cdc28p kinase inhibitor
YKL153W	__________	-1.27	13569223	10665963	unknown	unknown
YLR087C	__________	-1.83	130020	71176	unknown	unknown
YLR457C	NBP1______	+1.18	99053	117344	unknown	Nap1p-binding protein
YMR190C	SGS1______	-1.12	62838	56036	mitosis, chromosome segregation	putative DNA helicase
YNL248C	RPA49_____	-1.34	60272	45066	transcription	RNA polymerase I 46 kD subunit
YOL152W	FRE7______	+4.24	152268	645405	unknown	unknown; similar to Fre1p and Fre2p
YOR362C	PRE10_____	+1.09	1043113	1134147	protein degradation	20S proteasome subunit C1 (alpha7)
YPR059C	__________	-1.69	401050	237914	unknown	unknown
YBR037C	SCO1______	-1.03	104166	100828	respiration	Cox1p and Cox2p stability (putative)
YCL060C	__________	+1.09	35646	38961
YDL154W	MSH5______	+1.08	44581	48063	DNA repair	MutS homolog; also recombination
YDR275W	__________	-1.15	238270	207359	unknown	unknown
YGR077C	PEX8______	+1.84	136652	251224	peroxisome biogenesis	unknown
YHR091C	MSR1______	+1.09	251521	273943	protein synthesis	tRNA synthetase, arginyl
YJR123W	RPS5______	+1.03	12503357	12901671	protein synthesis	ribosomal protein S5
YLR271W	__________	-1.52	279365	183374	unknown	unknown; similar to retrovirus-related protease
YMR010W	__________	+1.35	275892	371553	unknown	unknown
YNL056W	__________	-1.06	381323	360707	unknown	unknown
YOR176W	HEM15_____	+1.06	462421	487975	heme biosynthesis	ferrochelatase (protoheme ferrolyase)
YPL154C	PEP4______	+1.06	1338537	1424531	protein degradation	vacuolar aspartyl protease
YAR002W	NUP60_____	-1.23	331748	270766	nuclear protein targeting	nuclear pore protein
YBR237W	PRP5______	+1.12	95350	106674	mRNA splicing	RNA helicase
YDR106W	ARP10_____	-1.13	53682	47333	cytoskeleton (putative)	actin-related protein
YDR475C	__________	+1.35	37014	50134	unknown	unknown
YER163C	__________	+1.35	241094	325404	unknown	unknown
YGL168W	__________	+1.01	356614	358577	unknown	unknown
YGR275W	RTT102____	+1.02	240610	246318	transposition (putative)	unknown; regulator of Ty1 transposition
YIL069C	RPS24B____	-1.82	11179025	6136130	protein synthesis	ribosomal protein S24B
YJL169W	__________	-3.39	630022	185876	unknown	unknown
YKL165C	MCD4______	+1.43	290242	413676	sporulation	morphogenesis checkpoint
YLR099C	ICT1______	+3.13	241133	755778	copper ion homeostasis (putative)	unknown
YNL260C	__________	-1.23	233010	189580	unknown	unknown
YOL164W	__________	+1.68	120433	202286	unknown	unknown; similar to Pseudomonas sp. alkyl sulfatase
YOR374W	ALD4______	+3.04	233832	711883	ethanol utilization	mitochondrial aldehyde dehydrogenase
YPR071W	__________	-1.05	59704	56696	unknown	unknown; similar to Yil029p (GB:Z49219)
YBR049C	REB1______	+1.08	171224	184962	transcription	transcription factor
YCL075W	__________	+1.12	29699	33265	unknown	encoded by Ty5-1
YDL166C	__________	-1.47	470423	319815	unknown	unknown
YDR287W	__________	+1.38	159948	220403	unknown	unknown; similar to inositol monophosphatase (SP:P29218,
YEL070W	__________	+1.68	38520	64892	unknown	unknown; similar to E. coli D-mannonate oxidoreductase
YGR089W	__________	+1.05	173766	181621	unknown	unknown; similar to human desmoplakin I PIR:A35536
YHR103W	SBE22_____	+1.13	118571	134487	bud growth	unknown
YJR135C	MCM22_____	-1.33	162167	122141	mitosis, chromosome segregation	unknown
YLR283W	__________	+1.28	102884	131431	unknown	unknown
YMR022W	QRI8______	+1.06	362428	384142	protein degradation, ubiquitin-mediated	E2 ub.-conjugating enzyme
YNL068C	FKH2______	+1.06	194595	205889	unknown	unknown; similar to Drosophila forkhead
YOR188W	MSB1______	+1.43	443587	632268	polarized growth	unknown
YPL166W	__________	+1.06	78113	83143	unknown	unknown
YAR027W	__________	+1.15	301520	346397	unknown	unknown; similar to subtelomerically-encoded proteins
YBR249C	ARO4______	-1.81	2342557	1295948	aromatic amino acid biosynthesis	2-dehydro-3-deoxyphosphoheptonate aldolase
YDR118W	APC4______	-1.09	114676	104738	cell cycle	anaphase-promoting complex subunit
YDR487C	RIB3______	-1.20	996134	832378	flavin biosynthesis	3,4-dihydroxy-2-butanone 4-phosphate synthase
YER173W	RAD24_____	-1.14	139848	122415	DNA repair; cell cycle	exonuclease, putative; checkpoint protein
YGL180W	APG1______	-1.20	63598	52859	autophagy	protein kinase
YGR287C	__________	+1.63	124848	204027	unknown	unknown; similar to alpha-D-glucosidase (maltase) (YGR287C
YIL080W	__________	+1.14	203264	232429	unknown	unknown
YJL181W	__________	+1.19	69086	82422	unknown	unknown
YKL177W	__________	+1.53	221359	337801	unknown	unknown
YLR111W	__________	+1.36	39705	54146	unknown	unknown
YMR213W	CEF1______	+1.07	143089	153647	unknown	unknown; similar to S. pombe cdc5+
YNL272C	SEC2______	+1.16	367365	427153	secretion	GDP/GTP exchange factor for Sec4p

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YOR010C	TIR2______	+1.17	182193	213540	unknown	unknown; induced by cold shock
YOR386W	PHR1______	+1.44	104679	150899	DNA repair	deoxyribodipyrimidine photolyase
YPR083W	__________	+1.17	128732	149987	unknown	unknown; similar to Halobacterium holobium cell surface
YBR061C	__________	-1.34	348270	259535	unknown	unknown; similar to Ctr86p and E. coli ftsJ
YCLX11W	__________	-1.58	785759	497674
YDL178W	AIP2______	-1.32	333082	251922	unknown	actin interacting protein
YDR299W	BFR2______	-1.30	393204	301592	secretion	unknown
YER004W	__________	-1.14	502751	441855	unknown	unknown
YGR101W	__________	+1.24	139939	172917	unknown	unknown
YHR115C	__________	-1.13	601624	531077	unknown	unknown
YJR147W	HMS2______	+1.01	243458	247031	pseudohyphal growth	transcription factor
YLR294C	__________	+1.27	541720	688787	unknown	unknown
YNL080C	__________	-1.22	223353	183449	unknown	unknown
YOR198C	BFR1______	-1.01	1198188	1185511	secretion	unknown
YPL178W	CBC2______	-2.26	701566	310796	meiosis, recombination	nuclear cap-binding protein complex small subunit
YAR047C	__________	+1.23	33960	41671	unknown	unknown
YBR261C	__________	+1.10	282523	311624	unknown	unknown
YDR130C	FIN1______	-1.45	177140	122295	cell cycle (putative)	intermediate filament protein
YDR499W	LCD1______	+1.43	78692	112336	unknown	unknown
YER185W	__________	+1.80	71952	129659	unknown	unknown; similar to Rtm1p
YGL192W	IME4______	+1.59	64538	102737	meiosis	transcription factor
YIL091C	__________	-1.31	502598	383323	unknown	unknown
YJL193W	__________	-1.15	193778	168467	unknown	unknown; similar to Sly41p and to triose
YKL189W	HYM1______	+1.27	132654	168540	unknown	unknown; similar to Aspergillus nidulans hymA which is
YLR123C	__________	+1.04	46218	48042	unknown	unknown; similar to class I family of aminoacyl-tRNA
YMR224C	MRE11_____	+1.16	117657	136311	meiosis, recombination	ds break formation complex subunit
YNL284C	MRPL10____	-1.11	382815	344376	protein synthesis	ribosomal protein, mitochondrial L10
YOR022C	__________	+1.18	100207	118574	unknown	unknown
YPR095C	SYT1______	-1.33	77881	58388	unknown	unknown; similar to S. typhimurium T1pA alpha-helical
YBR073W	RDH54_____	+1.77	270483	478699	meiosis	helicase
YCR011C	ADP1______	-1.03	236984	230818	transport	(putative) ATP-dependent permease
YDL190C	UFD2______	+1.27	164512	209444	protein degradation, ubiquitin-mediated	unknown; may influence multi-Ub chain topology
YDR311W	TFB1______	-1.06	164533	155633	transcription	TFIIH 75 kD subunit
YER014W	HEM14_____	-1.49	120988	80991	heme biosynthesis	protoporphyrinogen oxidase
YGR111W	__________	-1.09	311774	286607	unknown	unknown; similar to southern house mosquito carboxylesterase
YHR127W	HSN1______	-1.20	478137	399558	unknown	suppresses SEC4 dominant negative mutant
YJR159W	SOR1______	+2.01	119394	239456	sorbitol metabolism	sorbitol dehydrogenase
YLR306W	UBC12_____	-1.20	70574	58872	protein degradation, ubiquitin-mediated	E2 ub.-conjugating enzyme
YNL092W	__________	+1.79	67888	121672	unknown	unknown
YOR210W	RPB10_____	-1.58	613364	387254	transcription	shared subunit of RNA polymerases I, II, and III
YPL189W	GUP2______	-1.16	84232	72620	glycerol utilization	glycerol transporter (putative)
YBL010C	__________	-1.49	137127	91933	unknown	unknown
YBR273C	__________	+1.00	255869	256613	unknown	unknown
YDL012C	__________	+1.21	205842	249475	unknown	unknown
YDR142C	PEX7______	+1.05	129773	136558	peroxisome biogenesis	import receptor
YDR511W	__________	-1.04	169021	163022	unknown	unknown
YFL010W	AUA1______	-1.33	929306	698548	amino acid uptake	ammonia regulation of GAP1 activity
YGL204C	__________	-1.14	174459	153512	unknown	unknown
YIL102C	__________	+1.05	43985	46182	unknown	unknown
YJL205C	NCE101____	-1.18	129320	109950	secretion, non-classical	unknown
YKL201C	MNN4______	-1.14	37202	32536	protein glycosylation	phosphatidylinositol kinase homolg
YLR135W	__________	+1.34	59642	80132	unknown	unknown
YML010W	SPT5______	+1.21	171215	207654	transcription	elongation factor
YMR237W	__________	+1.29	302623	390987	unknown	unknown; similar to Chs6p/Csd3p
YNL294C	__________	+1.88	273071	512527	unknown	unknown
YOR034C	AKR2______	+1.38	140901	194274	endocytosis of Ste3p	unknown
YPL012W	__________	-1.29	1227186	948546	unknown	unknown
YPR107C	YTH1______	-1.12	222649	199369	mRNA 3'-end processing	cleavage/polyadenylation specificity factor subunit
YBR084W	MIS1______	+1.20	602247	722086	folate metabolism	C1-tetrahydrofolate synthase
YCR022C	__________	-1.03	56853	55278	unknown	unknown
YDL202W	MRPL11____	+1.19	133938	159417	protein synthesis	ribosomal protein, mitochondrial L11
YDR321W	ASP1______	-1.12	733147	653428	asparagine utilization	L-asparaginase I
YER024W	__________	-1.07	162807	152260	unknown	unknown; similar to Yat1p
YGL012W	ERG4______	+1.17	504312	588014	sterol metabolism	sterol C-24 reductase
YGR123C	PPT1______	-1.33	408240	306714	unknown	protein phosphatase
YHR138C	__________	+2.90	181426	525768	unknown	unknown
YJL012C	PHM3______	-1.73	830488	480210	phosphate metabolism (putative)	polyphosphate synthetase (putative)
YKL011C	CCE1______	-1.03	133027	129003	tRNA processing	cruciform cutting endonuclease
YLL012W	__________	+3.35	157129	526181	unknown	unknown; similar to human triacylglycerol lipase
YLR317W	__________	+1.12	58948	65815	unknown	unknown
YMR054W	STV1______	+1.46	149630	218041	vacuolar acidification	vacuolar H+-ATPase V0 domain 102 KD subunit
YNL104C	LEU4______	-1.34	2472357	1838849	leucine biosynthesis	2-isopropylmalalate synthase
YOL012C	HTA3______	-1.39	460494	330575	chromatin structure	histone-related
YOR222W	ODC2______	-1.07	423558	396227	unknown	unknown; similar to mitochondrial ADP/ATP carrier proteins
YPL201C	__________	-1.20	71945	59734	unknown	unknown
YAR071W	PHO11_____	-6.22	2915294	468729	phosphate metabolism	secreted acid phosphatase
YBL022C	PIM1______	+1.28	193458	248464	respiration	mitochondrial ATP-dependent protease
YBR285W	__________	+1.37	40095	54920	unknown	unknown
YDL024C	DIA3______	+1.23	65553	80565	pseudohyphal growth (putative)	unknown
YDR154C	__________	-1.42	4309435	3030530	unknown	unknown
YDR523C	SPS1______	-1.64	168457	102753	meiosis	protein kinase
YFL018C	LPD1______	+1.03	139481	144105	TCA cycle	dihydrolipoamide dehydrogenase
YGL216W	KIP3______	+1.66	76206	126298	mitosis	kinesin related protein
YHL020C	OPI1______	+1.65	399053	658080	phospholipid metabolism	negative regulator of phospholipid biosynthesis
YIL114C	POR2______	+1.21	58311	70713	mitochondrial transport	porin, anion channel
YJL217W	__________	+1.18	841169	989420	unknown	unknown
YKL213C	DOA1______	+1.47	288159	422890	protein degradation, ubiquitin-mediated	unknown
YLR147C	SMD3______	-1.09	124637	114635	mRNA splicing	core snRNP protein
YML021C	UNG1______	-1.19	193348	162037	DNA repair	uracil DNA glycosylase
YMR250W	GAD1______	+1.88	105687	199093	glutamate metabolism	glutamate decarboxylase
YNL306W	__________	+1.49	142146	211494	protein synthesis	ribosomal protein, mitochondrial small subunit
YOR046C	DBP5______	-1.60	1105485	691844	mRNA export	RNA helicase
YPL024W	NCE4______	+1.04	194365	202182	cell separation	negative regulator of CTS1 expression
YPR119W	CLB2______	-1.39	185787	133877	cell cycle	G2/M cyclin
YBR095C	__________	-1.15	122836	106653	unknown	unknown; similar to Drosophila cyclin B
YCR032W	BPH1______	+2.47	168664	415788	transport	acetic acid export pump (putative)
YDL214C	__________	+1.13	41237	46762	unknown	protein kinase
YDR333C	__________	+1.35	178711	241800	unknown	unknown
YER036C	__________	+1.41	667995	940751	unknown	unknown; similar to members of the ATP-binding cassette
YGL024W	__________	-1.25	61601	49443	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YGR135W	PRE9______	-1.04	690820	666566	protein degradation	20S proteasome subunit Y13 (alpha3)
YHR148W	IMP3______	-1.51	418089	277603	rRNA processing	U3 snoRNP protein
YJL024C	APS3______	+1.27	161981	206254	vacuolar protein targeting	AP-3 complex subunit
YKL023W	__________	+1.27	157632	199986	unknown	unknown
YLL024C	SSA2______	+2.47	2037411	5025781	ER and mitochondrial translocation	cytosolic HSP70
YLR329W	REC102____	-1.12	63427	56606	meiosis, recombination	ds break formation complex subunit
YMR066W	SOV1______	-1.13	83248	73892	respiration (putative)	unknown; synthesis of Var
YNL116W	__________	-1.11	378938	341622	unknown	unknown
YOL024W	__________	-1.29	72094	55899	unknown	unknown
YOR234C	RPL33B____	-1.91	4543018	2374350	protein synthesis	ribosomal protein L33B
YPL213W	LEA1______	-1.26	340975	271644	mRNA splicing	U2 snRNP protein
YBL034C	STU1______	+1.59	88773	141506	mitosis	spindle component
YBR297W	MAL33_____	+1.78	73577	130733	maltose metabolism	regulator of maltose metabolic genes
YDL036C	__________	-1.17	195006	167046	unknown	unknown; similar to Rib2p
YDR166C	SEC5______	-1.02	36771	36024	secretion	exocyst complex subunit
YDR535C	__________	+1.32	38226	50595	unknown	unknown
YFL029C	CAK1______	+1.20	165841	198193	cell cycle	protein kinase
YGL227W	VID30_____	+1.19	219563	261848	vacuolar protein targeting (putative)	unknown; TOR inhibitor
YHL031C	GOS1______	-1.07	298224	279957	secretion	Golgi SNARE
YIL126W	STH1______	-1.11	37012	33257	chromatin structure	chromatin remodeling complex subunit
YJR005W	APL1______	+1.62	130924	212043	secretion	vesicle coat component
YKL225W	__________	-1.11	35490	31896	unknown	unknown
YML032C	RAD52_____	+1.08	237004	256047	DNA repair and recombination	Rad51p cofactor
YMR261C	TPS3______	+1.72	205210	352848	trehalose utilization	alpha,alpha-trehalose-phosphate synthase
YNL318C	HXT14_____	-1.78	81763	45909	transport	hexose permease
YOR058C	ASE1______	+2.13	257907	548151	mitosis	spindle midzone component
YPL036W	PMA2______	+1.22	526073	642616	H+ homeostasis	plasma membrane H+-ATPase
YPR131C	NAT3______	-1.17	227176	194789	protein processing	protein N-acetyltransferase
YBR107C	IML3______	+1.20	114447	137491	mitosis, chromosome segregation (putative)	unknown
YCR044C	PER1______	-1.16	208332	178972	protein processing (putative)	unknown
YDL226C	GCS1______	-1.19	459501	386652	secretion	vesicle transport; GAP for ARF
YDR345C	HXT3______	+1.68	3754942	6291528	transport	hexose permease
YER046W	__________	-1.61	270850	168316	unknown	unknown
YGL036W	MTC2______	+1.31	547185	716876	unknown	unknown
YGR147C	NAT2______	-1.19	205192	172320	protein processing	N-acetyltransferase for N-terminal methionine
YHR160C	PEX18_____	-1.06	76763	72692	peroxisome biogenesis (putative)	unknown, "peroxin"
YJL036W	SNX4______	+1.25	145406	182189	protein targeting (putative)	unknown; similar to human sorting nexins
YKL034W	__________	+1.49	112335	166869	unknown	unknown
YLL036C	PRP19_____	-1.05	187517	177744	mRNA splicing; DNA repair	non-snRNP spliceosome component
YLR341W	__________	+1.25	54852	68717	unknown	unknown
YMR077C	__________	-1.28	172483	134754	unknown	unknown; similar to Snf7p
YNL128W	TEP1______	+1.07	111988	120308	unknown	protein phosphatase
YOL036W	__________	+1.66	307333	511330	unknown	unknown
YOR246C	__________	+1.17	274188	321681	unknown	unknown
YPL225W	__________	-1.30	1007467	772882	unknown	unknown
YBL046W	__________	+1.22	134118	163350	unknown	unknown
YDL048C	STP4______	+1.58	378044	596120	tRNA splicing	unknown
YDR176W	NGG1______	+1.08	87974	94895	chromatin structure	histone acetyltransferase complex subunit
YFL039C	ACT1______	+1.31	5404612	7084446	cytoskeleton	actin
YGL239C	__________	-1.98	221339	111892	unknown	unknown
YHL043W	ECM34_____	+1.11	94294	104511	cell wall biogenesis	unknown
YIL138C	TPM2______	+1.42	199054	283293	cytoskeleton	tropomyosin
YJR016C	ILV3______	-1.05	1721561	1641625	isoleucine and valine biosynthesis	dihydroxyacid dehydratase
YKR012C	__________	+2.60	205279	534695	unknown	unknown
YLR169W	__________	-1.38	47412	34268	unknown	unknown
YML042W	CAT2______	+1.30	73682	95917	fatty acid transport	carnitine O-acetyltransferase
YNL330C	RPD3______	-1.11	357147	322365	chromatin structure	histone deacetylase
YOR070C	GYP1______	-1.25	80351	64223	signaling	GTPase-activating protein for Ypt1p
YPL048W	CAM1______	-1.03	1569282	1530022	protein synthesis	translation elongation factor EF-1gamma
YPR141C	KAR3______	-1.11	257012	230558	mating; nuclear fusion; mitosis	kinesin-like protein
YBR118W	TEF2______	+1.04	15514758	16077645	protein synthesis	translation elongation factor EF-1 alpha
YCR056W	__________	-2.04	2150270	1053897
YDL238C	__________	+1.47	1667720	2447167	unknown	unknown
YDR357C	__________	+1.01	498076	502787	unknown	unknown
YER056C	RPL34A____	-1.50	2325866	1551269	protein synthesis	ribosomal protein L34A
YGL048C	RPT6______	+1.02	554267	563638	protein degradation	26S proteasome regulatory subunit
YGR159C	NSR1______	-1.40	2210971	1581207	nuclear protein targeting	NLS-binding protein
YHR172W	SPC97_____	+1.06	145361	154217	cytoskeleton	spindle pole body component
YJL049W	__________	+1.39	184184	256304	unknown	unknown
YKL046C	__________	+2.36	529123	1248967	unknown	unknown
YLL048C	YBT1______	-1.06	95827	90097	transport	bile acid transporter of ABC family
YLR353W	BUD8______	-1.40	80643	57652	bud site selection, bipolar	unknown
YMR088C	__________	+1.22	229753	281059	unknown	unknown
YNL140C	__________	-1.11	255792	230629	unknown	unknown
YOL048C	__________	-1.02	159491	156686	unknown	unknown
YOR258W	__________	-1.40	142808	101735	unknown	unknown
YPL237W	SUI3______	+1.00	852407	852647	protein synthesis	translation initiation factor eIF2 beta subunit
YBL058W	SHP1______	-1.05	293262	279661	glucose repression	(putative) Glc7p regulatory subunit
YDL060W	__________	-1.19	159763	134384	unknown	unknown
YDR187C	__________	+2.20	85744	188919	unknown	unknown
YFL051C	__________	-1.08	51951	48281	unknown	unknown; similar to Flo1p family of proteins
YGL251C	HFM1______	-1.19	189577	158876	unknown	DNA/RNA helicase, putative
YHR003C	__________	-1.32	794747	600745	unknown	unknown; similar to Ykl027p and weak similarity to E.
YIL150C	DNA43_____	+2.72	166813	454214	DNA replication	unknown
YJR027W	__________	+1.03	15733592	16168699	unknown	unknown; similar to E. coli molybdopterin-converting factor
YKR024C	DBP7______	-1.28	3215257	2503240	ribosome biogenesis	putative RNA helicase
YLR181C	__________	-1.09	562473	515211	unknown	unknown
YMR285C	__________	-1.08	294736	271907	unknown	unknown
YNR003C	RPC34_____	+1.06	241776	255178	transcription	RNA polymerase III 34 kD subunit
YOR082C	__________	-1.51	97378	64362	unknown	unknown
YPR153W	__________	-1.39	94452	67914	unknown	unknown
YBR130C	SHE3______	+1.24	143439	177851	cell polarity	asymmetric HO expression
YCR068W	__________	+1.39	49741	69300	unknown	unknown
YDR002W	YRB1______	-1.73	2261818	1304033	nuclear protein targeting	GTPase-activating protein for Ran
YDR367W	__________	-1.87	372673	199795	unknown	unknown
YGL060W	__________	-1.03	139820	135933	unknown	unknown
YGR167W	CLC1______	-1.23	901971	734364	endocytosis and secretion	clathrin light chain
YHR184W	SSP1______	-1.47	261722	178201	meiosis,nuclear division and spore formation	unknown
YJL061W	NUP82_____	+1.00	415872	416270	nuclear protein targeting	nuclear pore protein
YKL058W	TOA2______	-1.11	281500	253732	transcription	TFIIA 13.5 kD subunit

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YLL060C	GTT2______	+1.14	957553	1094591	glutathione metabolism	glutathione transferase
YLR365W	__________	-1.09	86669	79799	unknown	unknown
YMR100W	MUB1______	+1.01	179838	182294	bud site selection	unknown
YNL152W	__________	-1.08	201349	187114	unknown	unknown
YOL058W	ARG1______	-1.72	1647209	959333	arginine biosynthesis	arginosuccinate synthetase
YOR270C	VPH1______	-1.45	1979713	1363076	vacuolar acidification	vacuolar H+-ATPase 95 kD subunit
YPL249C	__________	-2.00	134282	67150	unknown	unknown
YBL070C	__________	+1.17	35732	41894	unknown	unknown
YDL072C	__________	+2.06	502186	1033242	unknown	unknown
YDR199W	__________	-1.63	160180	98124	unknown	unknown
YFL063W	__________	+1.63	64754	105246	unknown	unknown; similar to Gin11p and Ykl225p
YGL263W	COS12_____	-1.27	36413	28586	unknown	unknown; similar to subtelomerically-encoded proteins
YHR014W	SPO13_____	-1.05	50378	47983	meiosis	negative regulator of M phase (putative)
YIL161W	__________	+1.19	182611	217104	unknown	unknown
YJR039W	__________	+1.08	111370	120831	unknown	unknown; similar to Paramecium tetraurelia NADH
YKR036C	CAF4______	-1.06	179139	169113	catabolite repression	component of CCR4 transcriptional complex
YLR193C	__________	-1.00	213039	212677	unknown	unknown; similar to Msf1p
YML063W	RPS1B_____	-1.15	15607111	13620968	protein synthesis	ribosomal protein S1B
YMR295C	__________	+1.88	1211734	2279085	unknown	unknown
YNR015W	SMM1______	-1.04	501525	479933	protein synthesis, mitochondrial (putative)	unknown
YOR094W	ARF3______	-1.62	378566	233062	secretion	GTP-binding ADP-ribosylation factor
YPL070W	__________	+1.38	344822	475342	unknown	unknown
YPR161C	SGV1______	+1.18	418629	494436	cell cycle	protein kinase
YBR142W	MAK5______	-1.35	209845	155117	mRNA splicing	RNA helicase
YCR080W	__________	-1.21	35054	28905
YDR014W	__________	+1.08	46388	50190	unknown	unknown
YDR379W	RGA2______	+1.28	52693	67615	signaling	Rho-GTPase activating protein
YER076C	__________	+1.46	48754	71039	unknown	unknown; similar to KHR1 killer toxin
YGL072C	__________	+1.36	146211	198945	unknown	unknown
YGR179C	__________	-1.18	142059	120373	unknown	unknown; similar to chicken myosin heavy chain, cardiac
YHR196W	__________	-1.28	644405	501628	unknown	unknown
YJL073W	JEM1______	+1.74	250603	436658	mating; nuclear fusion	DnaJ-like protein
YKL070W	__________	-1.02	82879	80885	unknown	unknown; similar to Bacillus subtilis transcriptional
YLR005W	SSL1______	+1.13	290868	329676	transcription	TFIIH subunit
YLR377C	FBP1______	-1.11	78464	70625	gluconeogenesis	fructose-1,6-bisphosphatase
YMR112C	MED11_____	-1.42	183798	129311	transcription	RNA polymerase II mediator subunit
YNL164C	__________	-1.29	261805	202880	unknown	unknown
YOL070C	__________	-1.35	506771	375155	unknown	unknown
YOR282W	__________	-1.28	146729	114917	unknown	unknown
YPL258C	THI21_____	-1.04	178210	170938	thiamine metabolism (putative)	unknown
YBL082C	RHK1______	-1.14	316450	277042	protein glycosylation	Dol-P-Man dependent alpha-1,3- mannosyltransferase (putative)
YDL084W	SUB2______	-1.57	1804701	1152262	mRNA splicing	RNA helicase
YFR007W	__________	+1.07	44523	47644	unknown	unknown
YGR012W	__________	-1.02	339426	331438	unknown	unknown; similar to Cys4p
YHR025W	THR1______	-1.25	1217224	974730	threonine biosynthesis	homoserine kinase
YIL172C	__________	+1.86	105884	197290	unknown	unknown; similar to alpha-D-glucosidase (maltase)
YJR051W	OSM1______	+1.20	310452	372863	anaerobic growth (putative)	fumarate reductase
YKR048C	NAP1______	+1.55	811789	1255939	chromatin structure	nucleosome assembly protein
YLR205C	__________	+2.22	151602	336888	unknown	unknown
YML075C	HMG1______	+1.47	1096169	1614260	sterol metabolism	3-hydroxy-3-methylglutaryl-coenzyme A reductase
YMR306W	FKS3______	+1.92	225932	433751	unknown	unknown; similar to Gls1p and Gls2p
YNR027W	__________	+1.35	235202	316686	unknown	unknown
YOR106W	VAM3______	-1.65	315974	191719	vacuole biogenesis	t-SNARE
YPL082C	MOT1______	-1.39	326907	234772	transcription	putative helicase
YPR173C	VPS4______	+1.08	777130	840867	vacuolar protein targeting	AAA ATPase family
YBR154C	RPB5______	-1.76	1059443	601448	transcription	shared subunit of RNA polymerases I, II, and III
YCR091W	KIN82_____	-1.14	76258	66873	unknown	protein kinase
YDR026C	__________	+1.13	93308	105487	unknown	unknown; similar to Reb1p
YDR391C	__________	+1.88	192291	362455	unknown	unknown
YER087W	__________	+1.09	102510	111585	unknown	unknown; similar to E. coli prolyl-tRNA synthetase
YGL084C	GUP1______	+1.22	148514	181136	glycerol utilization	glycerol transporter (putative)
YGR191W	HIP1______	-1.00	638524	637485	transport	histidine permease
YHR208W	BAT1______	-4.27	4632936	1085731	branched chain amino acid degradation	transaminase
YJL085W	EXO70_____	+1.11	246768	273601	secretion	exocyst complex subunit
YKL082C	__________	-1.42	760437	534192	unknown	unknown
YLR017W	MEU1______	-1.14	607106	533227	glucose derepression	regulator of ADH2 expression
YLR389C	STE23_____	+1.10	166784	183328	mating	a-factor processing protease (putative)
YMR123W	PKR1______	-2.81	439807	156384	killer toxin sensitivity (Pichia farinosa toxin)	unknown
YNL176C	__________	+1.03	259241	268248	unknown	unknown
YOL082W	__________	-1.11	258038	233328	unknown	unknown
YOR294W	RRS1______	-1.76	715995	406202	ribosome biogenesis (putative)	unknown
YPL270W	MDL2______	+1.10	211383	233324	transport	ATP-binding cassette (ABC) family
YBL094C	__________	+1.15	130529	150015	unknown	unknown; similar to Neurospora crassa chitin synthase
YDL096C	__________	+1.82	51532	93702	unknown	unknown
YDR219C	__________	+1.09	134469	146220	unknown	unknown
YFR019W	FAB1______	-1.04	39251	37614	mitosis	putative PIP 5-kinase
YGR024C	__________	-1.16	368762	318451	unknown	unknown
YHR037W	PUT2______	-1.33	88539	66336	amino acid biosynthesis	delta-1-pyrroline-5-carboxylate dehydrogenase
YIR007W	__________	-1.02	86613	84995	unknown	unknown; similar to endoglucanase
YJR063W	RPA12_____	-1.37	588937	429426	transcription	RNA polymerase I subunit
YKR060W	__________	-1.90	295072	155442	unknown	unknown
YLR217W	__________	+2.37	159958	379566	unknown	unknown
YML087C	__________	+1.39	172851	240984	unknown	unknown
YNR039C	ZRG17_____	-1.01	248972	246538	unknown	unknown; similar to Anopheles mitochondrial NADH
YOR118W	__________	-1.34	78545	58623	unknown	unknown
YPL094C	SEC62_____	+1.10	697237	763650	secretion	ER protein translocation subcomplex subunit
YPR185W	APG13_____	+1.87	605787	1134058	autophagy	unknown
YBR165W	UBS1______	+1.04	50416	52608	protein degradation, ubiquitin-mediated	regulates Cdc34p (ubiquitin-conjugating enzyme)
YCR102C	__________	+1.36	86801	118324	unknown	unknown; similar to Bacillus subtilis sorbitol
YDR036C	__________	-1.09	117488	107595	unknown	unknown; similar to enoyl CoA hydratase
YDR403W	DIT1______	+1.25	67086	83932	sporulation, spore wall biogenesis	synthesizes dityrosine precursor
YER098W	UBP9______	+1.54	74153	114189	protein degradation, ubiquitin-mediated	ubiquitin C-terminal hydrolase
YGL096W	__________	-1.08	45371	42198	unknown	unknown; similar to Cup9p
YGR203W	__________	-1.50	450629	300055	unknown	unknown
YHR217C	__________	+1.08	450263	488012	unknown	unknown
YJL097W	__________	-1.72	692789	402225	unknown	unknown
YKL094W	YJU3______	-1.02	497501	487868	unknown	unknown; similar to E.coli hypothetical protein
YLR029C	RPL15A____	-1.56	14699124	9397855	protein synthesis	ribosomal protein L15A
YLR401C	__________	-1.34	362128	269484	unknown	unknown; similar to R. capsulatus protein nifR3
YMR135C	__________	+1.09	204983	223466	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_gas1	wt, strain W303	delta_gas1


YNL188W	KAR1______	-1.49	259566	174619	cytoskeleton	nuclear fusion; also spindle
YOL094C	RFC4______	-1.34	435519	324432	DNA replication	replication factor C, 37 kDa subunit
YPL282C	__________	-2.52	105353	41828	unknown	unknown; similar to other subtelomerically-encoded proteins