del_fks1

25-Sep-2001 by nhauser
multiconditional experiment no. (if not recombined): 1
hybridisations (conditions & MCE(s) marked by brackets): {{1,2,3,4,5},{6,7,8,9,0}}
normalization method [parameters]: log. reg. 2
intensity threshold: 450000

			factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
			condition1	condition0(CONTROL)	condition1	functional category	description
			delta_fks1	wt, strain FY834	delta_fks1


*	YAL001C	TFC3______	+1.10	96701	106349	transcription	TFIIIC 138 kD subunit
	YBR166C	TYR1______	+1.34	299053	400406	tyrosine biosynthesis	prephenate dehydrogenase (NADP+
	YCR102W	__________	+1.17	137062	160258	unknown	unknown
	YDR037W	KRS1______	-1.05	2121951	2030131	protein synthesis	tRNA synthetase, lysyl
	YDR404C	RPB7______	+1.29	196371	253207	transcription	RNA polymerase II 19 kD subunit
	YER099C	PRS2______	+1.16	394331	459379	purine biosynthesis	ribose-phosphate pyrophosphokinase
	YGL097W	SRM1______	-1.04	271095	260738	nuclear targeting; mating	GDP/GTP exchange factor for Gsp1p/Gsp2p
	YGR204W	ADE3______	-1.14	657557	576604	purine biosynthesis	C1-5,6,7,8-tetrahydrofolate synthase
	YIL001W	__________	-1.06	73602	69143	unknown	unknown
	YJL098W	SAP185____	+1.01	198223	201159	cell cycle	Sit4p-associated protein
	YKL095W	YJU2______	-1.02	76105	74700	unknown	unknown
	YLR030W	__________	+1.04	103263	107724	unknown	unknown
	YLR402W	__________	-1.12	109944	98072	unknown	unknown
	YNL189W	SRP1______	-1.06	92687	87412	nuclear protein targeting	alpha-karyopherin
	YOL095C	HMI1______	-1.04	92169	88225	unknown	mitochondrial DNA helicase (putative)
	YOR305W	__________	-1.07	99008	92253	unknown	unknown
	YPL283C	YRF1-7____	-1.03	95071	92129	unknown	Y' helicase (subtelomerically-encoded)
	YBL095W	__________	+1.53	214903	328330	unknown	unknown
	YCL001W	RER1______	+1.19	88551	105586	secretion; protein targeting	ER protein retention (Golgi membrane protein)
	YDL097C	RPN6______	+1.52	1224335	1859002	protein degradation	26S proteasome regulatory subunit
	YDR220C	__________	+1.27	106560	135461	unknown	unknown
	YEL001C	__________	+1.49	1289570	1926470	unknown	unknown
	YFR020W	__________	+1.33	185955	247229	unknown	unknown
	YGR025W	__________	-1.12	143915	128558	unknown	unknown
	YHR038W	FIL1______	+1.16	158247	182988	protein syntehsis	robosomal protein, mitochondrial (putative)
	YIR008C	PRI1______	-1.08	75514	69848	DNA replication	DNA primase subunit
	YJR064W	CCT5______	-1.40	1340728	960248	protein targeting	cytoplasmic chaperonin complex
	YKR061W	KTR2______	+2.25	207400	465885	protein glycosylation	putative mannosyltransferase; type 2 membrane protein
	YLR218C	__________	+1.27	198169	251044	unknown	unknown
	YML088W	__________	-1.32	428317	325261	unknown	unknown
	YNL001W	DOM34_____	-1.22	485074	397760	protein synthesis (putative)	unknown
	YNR040W	__________	-1.05	116146	111000	unknown	unknown; zinc regulated
	YOR119C	RIO1______	-1.66	345417	207613	unknown	unknown; similar to a C.elegans ZK632.3 protein
	YPL095C	__________	-1.17	224280	192287	unknown	unknown; similar to Ybr177p
	YPR186C	PZF1______	-1.10	326957	298508	transcription	TFIIIA
	YAL014C	__________	+1.34	385895	517081	unknown	unknown
	YBR178W	__________	+1.06	99649	105540	unknown	unknown
	YCRX08W	__________	+1.02	196354	200687
	YDR049W	__________	+1.10	183268	201822	unknown	unknown
	YDR416W	SYF1______	+1.16	171453	198560	cell cycle (putative)	unknown; synthetic lethal with cdc40
	YER111C	SWI4______	+1.35	302548	409390	cell cycle	transcription factor
	YGL109W	__________	+1.07	253500	271436	unknown	unknown
	YGR216C	GPI1______	+1.10	232999	255151	protein processing	N-acetylglucosaminylphosphatidylinositol synthesis
	YIL013C	PDR11_____	+1.03	84589	86984	transport	ATP-binding cassette (ABC) family
	YJL110C	GZF3______	+1.08	268611	289461	nitrogen catabolism	transcription factor
	YKL106W	AAT1______	-1.16	352897	303743	aspartate metabolism?	aspartate aminotransferase,
	YLR040C	__________	+1.18	1338603	1574187	unknown	unknown
	YLR412W	__________	-1.12	384874	343574	unknown	unknown
	YMR147W	__________	-1.15	169030	146808	unknown	unknown
	YNL201C	__________	-1.12	102179	91438	unknown	unknown
	YOL105C	WSC3______	+1.15	286697	329753	signaling	stress response
	YOR317W	FAA1______	+1.00	743702	746919	fatty acid metabolism	long chain fatty acyl:CoA synthetase
	YPR012W	__________	+1.07	800005	859977	unknown	unknown
	YBL105C	PKC1______	-1.04	233320	223344	cell wall biogenesis	protein kinase C
	YCL012W	__________	+1.27	179693	228002	unknown	unknown
	YDL109C	__________	+1.18	106100	125214	unknown	unknown
	YDR232W	HEM1______	-1.10	324139	295969	heme biosynthesis	5-aminolevulinate synthase
	YEL013W	VAC8______	+1.12	278850	312568	vacuolar protein targeting	vacuolar protein
	YFR031C	RPL2A_____	+1.10	80773	88552	protein synthesis	ribosomal protein L2A
	YGR035C	__________	-1.03	114958	112118	unknown	unknown
	YHR049W	__________	+1.07	854225	912245	unknown	unknown
	YIR019C	MUC1______	-1.02	78294	76533	flocculation and invasive growth	unknown
	YJR076C	CDC11_____	+1.16	773501	898232	cytokinesis	septin
	YKR073C	__________	-1.06	103701	97538	unknown	unknown
	YLR228C	ECM22_____	+1.00	266467	267309	unknown	unknown; similar to transcription factors, has Zn[2]-Cys[6]
	YML099C	ARG81_____	+1.02	139838	142279	arginine metabolism	transcription factor
	YNL013C	__________	-1.01	306245	303989	unknown	unknown
	YNR052C	POP2______	-1.05	732816	698137	glucose derepression	component of CCR4 complex
	YOR131C	__________	+1.22	350698	429051	unknown	unknown; similar to E. coli protein yhfE gene of the dam
	YPL107W	__________	+1.15	295040	338044	unknown	unknown
	YPR198W	SGE1______	-1.20	1136224	944391	crystal violet resistance	transporter, major facilitator superfamily
	YAL026C	DRS2______	+1.10	80290	88025	transport	Ca(2+) transporting ATPase
	YBR190W	__________	+1.32	191695	253109	unknown	unknown; similar to glycosyl hydrolases
	YCRX20C	__________	-1.03	120362	116696
	YDR061W	__________	+1.37	280966	384168	unknown	unknown; similar to E. coli photorepair protein
	YDR428C	__________	+1.10	308997	338971	unknown	unknown
	YER122C	GLO3______	+1.11	728605	805739	cell proliferation	unknown
	YGL121C	__________	+1.64	128768	211002	unknown	unknown
	YGR228W	__________	+1.17	632195	741401	unknown	unknown
	YIL024C	__________	+1.44	161576	233348	unknown	unknown
	YJL122W	__________	-1.50	636628	425295	unknown	unknown
	YKL118W	__________	-1.03	128310	124108	unknown	unknown
	YLR052W	__________	+1.08	339595	367681	unknown	unknown
	YLR424W	__________	-1.01	229165	227024	unknown	unknown; similar to retrovirus-related protease
	YMR158W	__________	+1.04	314627	326056	unknown	unknown; similar E. coli ribosomal protein S8
	YNL213C	__________	+1.21	269127	326154	unknown	unknown
	YOL117W	__________	+1.07	136624	145533	unknown	unknown
	YOR329C	SCD5______	+1.12	273433	307054	secretion	suppressor of clathrin deficiency
	YPR024W	YME1______	-1.04	439899	421440	mitochondrial protein processing	AAA family protease
	YBR004C	__________	+1.53	189038	290006	unknown	expressed during sporulation
	YCL025C	AGP1______	+1.45	171439	248498	transport	amino acid permease
	YDL121C	__________	-1.07	703799	659874	unknown	unknown
	YEL024W	RIP1______	+1.94	414461	805970	respiration	ubiquinol cyt.-c reductase iron-sulfur protein
	YFR041C	__________	+1.40	351718	492198	unknown	unknown; similar to dnaJ proteins Sis1p, Mdj1p, and Scj1p
	YGR042W	__________	+1.18	316226	372191	unknown	unknown
	YHR059W	__________	+1.02	240703	244764	unknown	unknown
	YIR029W	DAL2______	-1.00	177613	176809	allantoin utilization	allantoicase
	YJR089W	BIR1______	+1.14	134219	153404	unknown	unknown
	YKR085C	MRPL20____	-1.07	396917	371696	protein synthesis	ribosomal protein, mitochondrial L20
	YLR240W	VPS34_____	-1.06	172803	162577	vacuolar protein targeting	phosphatidylinositol 3-kinase

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YML109W	ZDS2______	-1.01	80079	79461	cell cycle	Zds1 homolog
YNL025C	SSN8______	+1.03	135583	139423	transcription	RNA polymerase II mediator subunit
YNR064C	__________	+1.04	179422	186557	unknown	unknown; similar to Rhodobacter capsulatus bchO
YPL119C	DBP1______	+1.13	137369	155038	mRNA processing	RNA helicase
YAL035W	FUN12_____	-1.33	1352647	1018459	unknown	unknown; similar to Bacillus subtilis IF2
YBR202W	CDC47_____	+1.05	322024	338627	DNA replication	MCM initiator complex
YDR073W	SNF11_____	+1.35	307588	413891	transcription	component of SWI/SNF global activator complex
YDR440W	DOT1______	+1.10	182669	200168	meiosis, checkpoint; transcriptional silencing	unknown
YER134C	__________	+1.09	88675	96259	unknown	unknown
YGL133W	ITC1______	+1.10	189723	208343	chromatin structure	chromatin remodeling complex subunit
YGR240C	PFK1______	-1.02	118286	115568	glycolysis	phosphofructokinase
YIL036W	CST6______	+1.07	312888	333449	chromosome stability	unknown; similar to Mei4p and to cAMP response element
YJL134W	LCB3______	-1.10	496668	450909	sphingolipid metabolism	sphingoid base-phosphate phosphatase
YKL130C	SHE2______	+1.03	347623	357581	cell polarity	asymmetric HO expression
YLR064W	__________	+1.09	541964	589515	unknown	unknown
YLR434C	__________	-1.37	193561	141175	unknown	unknown
YNL225C	CNM67_____	+1.23	140307	172351	cytoskeleton	spindle pole body component
YOL129W	__________	+1.22	634675	771932	unknown	unknown
YOR341W	RPA190____	+1.06	84747	89729	transcription	RNA polymerase I 190 kD subunit
YPR036W	VMA13_____	-1.55	3174788	2054789	vacuolar acidification	vacuolar H+-ATPase V1 domain 54 KD subunit
YBR014C	__________	+1.34	439422	590088	unknown	unknown; similar to glutaredoxin
YCL037C	SRO9______	+1.31	130716	171887	cytoskeleton	actin filament organization
YDL132W	CDC53_____	+1.07	400512	426942	cell cycle	G1 cyclin degradation
YDR256C	CTA1______	+1.09	143561	156114	oxidative stress response	catalase A
YEL036C	ANP1______	+1.16	879722	1020595	protein glycosylation	mannosyltransferase complex subunit
YFR053C	HXK1______	+1.50	1026707	1539130	glycolysis	hexokinase I
YGR054W	__________	-1.22	373893	305873	unknown	unknown; similar to C. elegans C14B9.6 protein
YHR070W	__________	-1.13	246480	217206	unknown	unknown
YIR041W	__________	+1.13	274313	310835	unknown	unknown; similar to Pau3p, Yil176p, Yil011p and other
YJR100C	__________	+1.02	296526	303860	unknown	unknown
YKR097W	PCK1______	+1.01	150747	151556	TCA cycle	phosphoenolpyruvate carboxykinase
YLR252W	__________	+1.30	168792	219059	unknown	unknown
YML120C	NDI1______	+1.27	268383	340560	oxidative phosphorylation	NADH-ubiquinone-6 oxidoreductase
YNR076W	PAU6______	+1.26	111527	140068	unknown	seripauperin family
YOR153W	PDR5______	+1.04	3380363	3501924	drug resistance	transporter
YPL131W	RPL5______	-1.01	15574945	15375717	protein synthesis	ribosomal protein L5
YAL046C	__________	+1.20	256254	307001	unknown	unknown
YBR214W	SDS24_____	+1.39	124339	172552	unknown	unknown; nuclear protein; similar to S. pombe sds23
YDR085C	AFR1______	+2.06	129608	266846	mating	cytoskeletal protein, similar to arrestins
YDR452W	PHM5______	+1.29	503949	652097	phosphate metabolism (putative)	vacuolar polyphosphatase
YER144C	UBP5______	+1.38	104537	144484	unknown	ubiquitin pathway
YGL145W	TIP20_____	+1.17	327558	383461	secretion	unknown; interacts with Sec20p
YGR252W	GCN5______	+1.08	196444	211516	chromatin structure	histone acetyltransferase
YIL048W	NEO1______	+1.06	227787	241903	neomycin resistance	ATPase
YJL146W	IDS2______	+1.03	287563	295647	signaling, meiosis pathway	Putative activator of Ime2p
YKL142W	MRP8______	+1.67	706953	1183625	protein synthesis	ribosomal protein, mitochondrial small subunit
YLR076C	__________	+1.02	15186750	15432554	unknown	unknown
YLR446W	__________	+1.01	72737	73495	unknown	unknown; similar to human hexokinase I
YMR179W	SPT21_____	+1.06	690942	734080	transcription	transcriptional regulator
YNL237W	YTP1______	+1.12	171399	192434	unknown	unknown; similar to mitochondrial electron transport proteins
YOL141W	PPM2______	-1.07	66850	62711	protein modification	carboxymethyltransferase
YOR351C	MEK1______	-1.03	69546	67821	meiosis	protein kinase
YPR048W	TAH18_____	-1.29	193817	149893	unknown	unknown; similar to NAPDH-cytochrome P450 reductase
YBR026C	(MRF1)____	+1.23	492094	607569	mitochondrial respiration	ARS-binding protein
YCL049C	__________	+1.91	179044	341316	unknown	unknown
YDL143W	CCT4______	-1.10	1265262	1153061	protein folding	cytoplasmic chaperonin subunit
YDR264C	AKR1______	+1.15	350096	402489	signaling, pheromone pathway; endocytosis; cell shape control	ankyrin-containing protein
YEL048C	__________	+1.10	129020	142557	unknown	unknown
YGR066C	__________	+1.08	121353	130971	unknown	unknown; similar to Vid24p
YHR080C	__________	+1.06	120804	128160	unknown	unknown; similar to Yfl042p
YJR112W	NNF1______	-1.05	302047	288158	mitosis	nuclear envelope protein
YLR261C	__________	+1.09	408021	445236	unknown	unknown
YML132W	COS3______	+1.06	1061841	1124854	unknown	unknown; similar to subtelomerically-encoded proteins
YNL047C	__________	+1.11	180276	199442	unknown	unknown; similar to Ask10p
YOR165W	__________	-1.00	196196	195742	unknown	unknown; similar to transcription factors, has Zn[2]-Cys[6]
YPL143W	RPL33A____	-1.05	3799717	3603705	protein synthesis	ribosomal protein L33A
YAL060W	__________	+1.08	740568	799693	unknown	unknown; similar to alcohol/sorbitol dehydrogenase
YBR226C	__________	+1.00	101222	101611	unknown	unknown
YDR097C	MSH6______	+1.05	169435	178629	DNA repair	MutS homolog; mismatch repair
YDR464W	SPP41_____	+1.08	86778	94048	splicing	negative regulator of spliceosome genes
YER154W	OXA1______	+1.06	467368	495834	respiration	cytochrome c oxidase assembly
YGL157W	__________	+1.25	354303	443077	unknown	unknown; similar to tomato dihydroflavonol 4-reductase
YGR264C	MES1______	-1.51	1935048	1277702	protein synthesis	tRNA synthetase, methionyl
YIL060W	__________	-1.35	11955215	8834230	unknown	unknown
YJL158C	CIS3______	+1.71	8680489	14875110	unknown	unknown; overexpression suppresses cik1 deletion
YKL154W	SRP102____	+1.33	1399333	1855773	secretion	signal recognition particle subunit
YLR088W	GAA1______	+1.17	605533	708858	protein processing	GPI:protein transamidase component
YLR458W	__________	+1.03	163043	167121	unknown	unknown
YMR191W	__________	+1.49	330655	491954	unknown	unknown
YNL249C	MPA43_____	+1.02	177556	181241	unknown	unknown; similar to YDR109c
YOL153C	__________	-1.04	176582	169315	unknown	unknown
YOR363C	PIP2______	-1.03	192070	186696	peroxisome proliferation	transcription factor
YPR060C	ARO7______	-1.07	630672	590855	aromatic amino acid biosynthesis	chorismate mutase
YBR038W	CHS2______	+1.17	87915	102584	cell wall biogenesis	chitin synthase II
YCL061C	__________	+1.08	1786054	1922908	unknown	unknown
YDL155W	CLB3______	+1.06	438439	465462	cell cycle	G2/M cyclin
YDR276C	PMP3______	+1.15	1531985	1760160	salt tolerance (putative)	unknown
YEL059W	__________	+1.44	130764	188108	unknown	unknown
YGR078C	PAC10_____	+1.02	710493	727228	cytoskeleton	non-native actin binding complex subunit
YHR092C	HXT4______	+1.00	116668	117158	transport	hexose permease
YJR124C	__________	-1.33	497114	375007	unknown	unknown; similar to multidrug resistance proteins
YLR272C	YCS4______	-1.05	257290	245416	mitosis, sister chromatid cohesion	cohesin complex component
YMR011W	HXT2______	-1.62	1227449	759652	transport	hexose permease
YNL057W	__________	+1.38	350370	481787	unknown	unknown
YOR177C	__________	-1.04	137880	132433	unknown	unknown
YPL155C	KIP2______	-1.15	77964	67527	cytoskeleton (putative)	kinesin-related protein
YAR003W	__________	+1.08	148736	160378	unknown	unknown
YBR238C	__________	-1.04	249841	240933	unknown	unknown
YDR107C	__________	+1.16	181498	209699	unknown	unknown; similar to Emp70p
YDR476C	__________	+1.04	189527	196760	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YER164W	CHD1______	-1.00	81279	81129	transcription	chromodomain-helicase-DNA-binding (CHD) family
YGL169W	SUA5______	-1.48	342718	232016	protein synthesis	translation initiation protein
YGR276C	RNH70_____	-1.34	700903	521297	DNA replication (putative)	ribonuclease H
YIL070C	MAM33_____	-1.29	358155	278363	respiration	mitochondrial acidic matrix protein
YJL170C	ASG7______	-1.12	133132	118673	unknown	unknown
YKL166C	TPK3______	-1.22	281592	230316	signaling, nutrient control of cell growth	cAMP-dependent protein kinase catalytic subunit
YLR100W	ERG27_____	-1.03	1566932	1521020	sterol metabolism	3-keto sterol reductase
YMR202W	ERG2______	-1.20	1351046	1125719	sterol metabolism	C-8 sterol isomerase
YNL261W	ORC5______	-1.12	74856	66776	DNA replication	origin recognition complex, 50 kD subunit
YOL165C	AAD15_____	-1.22	77281	63168	unknown	hypothetical aryl-alcohol dehydrogenase
YOR375C	GDH1______	-1.18	76500	64587	glutamate biosynthesis	glutamate dehydrogenase
YPR072W	NOT5______	-1.12	78781	70231	transcription	global negative regulator cpmplex component
YBR050C	REG2______	+1.12	132232	147776	glucose repression	(putative) Glc7p regulatory subunit
YCL076W	__________	-1.08	105697	97488	unknown	unknown
YDL167C	NRP1______	-1.31	283667	215887	unknown	unknown
YDR288W	__________	+1.19	287121	342939	unknown	unknown
YEL071W	DLD3______	-1.45	2084025	1435189	pyruvate metabolism	D-lactate dehydrogenase
YGR090W	__________	-1.09	310190	284386	unknown	unknown
YHR104W	GRE3______	-1.05	791142	754329	unknown	induced by osmotic stress
YJR136C	__________	-1.14	259428	228326	unknown	unknown
YLR284C	ECI1______	-1.06	168568	159497	unknown	putative enoyl-CoA hydratase, peroxisomal
YMR023C	MSS1______	-1.05	141444	135064	protein synthesis (putative)	mitochondrial GTPase; COX1 expression
YNL069C	RPL16B____	-1.15	13695472	11930004	protein synthesis	ribosomal protein L16B
YOR189W	__________	+1.10	325318	356344	unknown	unknown
YPL167C	REV3______	-1.05	132327	125777	DNA repair	polymerase zeta subunit
YAR028W	__________	+1.01	99278	100072	unknown	unknown; similar to subtelomerically-encoded proteins
YBR250W	__________	+1.04	127712	133171	unknown	unknown
YDR119W	__________	-1.22	1391993	1138438	unknown	unknown; similar to human cystic fibrosis
YDR488C	PAC11_____	-1.10	99424	90334	unknown	unknown; required in absence of Cin8p
YER174C	GRX4______	+1.07	426036	455641	oxidative stress response	glutaredoxin
YGL181W	GTS1______	+1.19	302956	360229	heat shock, flocculation, and bud emergence	transcription factor
YGR288W	MAL13_____	-1.06	165685	156201	maltose utilization	regulator of maltose metabolic genes
YJL182C	__________	-1.11	116796	105310	unknown	unknown
YKL178C	STE3______	-1.07	104975	98246	mating	a-factor receptor
YLR112W	__________	-1.31	224010	170993	unknown	unknown
YMR214W	SCJ1______	-1.17	939139	801295	unknown	unknown; similar to E. coli DnaJ
YNL273W	TOF1______	-1.20	81574	67984	unknown	topoisomerase I interacting factor
YOR011W	__________	-1.25	83189	66486	unknown	ATP-binding cassette (ABC) superfamily
YOR387C	__________	-1.11	82952	75055	unknown	unknown
YPR084W	__________	-1.31	85283	64978	unknown	unknown
YBR062C	__________	+1.08	84282	90823	unknown	unknown
YCLX12W	__________	+1.07	84810	90454
YDL179W	PCL9______	+1.14	147700	168613	cell cycle	cyclin (Pho85p)
YDR300C	PRO1______	-1.18	382824	323773	proline biosynthesis	glutamate 5-kinase
YER005W	YND1______	+1.01	190262	191840	protein glycosylation (putative)	apyrase (NDPase/NTPase)
YGR102C	__________	-1.08	92846	85780	unknown	unknown
YHR116W	__________	-1.06	429764	404262	unknown	unknown
YJR148W	BAT2______	-2.21	1861426	841673	branched chain amino acid biosynthesis	transaminase
YLR295C	ATP14_____	+1.08	395524	427258	ATP synthesis	F1F0-ATPase complex, subunit h
YMR034C	__________	-1.19	95164	79816	unknown	unknown
YNL081C	__________	+1.10	297104	326479	unknown	unknown; similar to mitochondrial ribosomal protein S13 of
YOR199W	__________	-1.08	104467	97120	unknown	unknown
YPL179W	PPQ1______	-1.22	86188	70381	translational regulation	protein phosphatase
YBL001C	ECM15_____	+2.06	819985	1687868	cell wall biogenesis	unknown
YBR262C	__________	+1.48	283535	420478	unknown	unknown
YDL001W	__________	+1.28	232716	297051	unknown	unknown; similar to Yfr048p
YDR131C	__________	+1.36	131987	179679	unknown	unknown
YDR500C	RPL37B____	+1.08	7683075	8297363	protein synthesis	ribosomal protein L37B
YFL-TYA	TY2A______	+1.44	150476	216145
YGL193C	__________	+1.14	211798	241711	unknown	unknown
YHL001W	RPL14B____	+1.05	13779015	14493931	protein synthesis	ribosomal protein L14B
YIL092W	__________	+1.09	250696	274275	unknown	unknown
YJL194W	CDC6______	+1.15	265326	304251	DNA replication	pre-initiation complex formation
YKL190W	CNB1______	+1.21	769296	930558	signaling	calcineurin regulatory B subunit
YLR124W	__________	+1.07	100843	108040	unknown	unknown
YML001W	YPT7______	+1.07	96891	104005	endocytosis	GTP-binding protein, rab family
YMR226C	__________	+1.18	1920888	2263451	unknown	unknown; similar to insect-type alcohol dehydrogenase,
YOR023C	AHC1______	-1.00	96338	96135	chromatin structure	histone acetyltransferase complex subunit
YPL001W	HAT1______	-1.06	301047	284950	chromatin structure	histone acetyltransferase complex subunit
YPR096C	__________	+1.01	89171	90084	unknown	unknown
YBR074W	__________	-1.19	200407	168825	unknown	unknown; similar to Ape3p (aminopeptidase Y)
YCR012W	PGK1______	-1.02	14679931	14371022	glycolysis	phosphoglycerate kinase
YDL191W	RPL35A____	+1.50	5509423	8258572	protein synthesis	ribosomal protein L35A
YDR312W	SSF2______	+1.08	779988	839537	signaling (putative)	suppresses G-protein beta subunit mutation
YGL001C	ERG26_____	+1.24	198678	246526	sterol metabolism	sterol C-3 dehydrogenase
YGR112W	SHY1______	+1.02	174842	177821	respiration	unknown
YHR128W	FUR1______	-1.38	1479178	1073487	pyrimidine salvage pathway	uracil phosphoribosyltransferase
YJL001W	PRE3______	+1.09	1426633	1560787	protein degradation	20S proteasome subunit (beta1)
YKL001C	MET14_____	+1.10	113228	124635	sulfate assimilation	adenylylsulfate kinase
YLL001W	DNM1______	+1.16	386719	450258	endocytosis	dynamin-related protein
YLR307W	CDA1______	-1.03	129978	126611	sporulation	chitin deacetylase
YNL093W	YPT53_____	-1.20	90021	75102	endocytosis	GTP-binding protein, rab family
YOL001W	PHO80_____	-1.17	95881	81846	cell cycle	cyclin (Pho85p)
YOR211C	MGM1______	-1.17	131490	112619	mitochondrial genome maintenance	dynamin family protein
YPL190C	NAB3______	+1.04	893032	924776	mRNA splicing	nuclear polyadenylated RNA-binding protein
YAR050W	FLO1______	-1.07	118142	110173	flocculation	cell wall protein
YBL011W	SCT1______	-1.03	215953	210471	unknown	suppresses a choline-transport mutant
YBR274W	CHK1______	+1.15	229624	264057	cell cycle	DNA damage checkpoint protein kinase
YDL013W	HEX3______	+1.22	229875	281149	hexose metabolism (putative)	unknown
YDR143C	SAN1______	+1.07	197296	210814	silencing	(putative) transcriptional regulator
YDR512C	__________	+1.51	395908	599668	unknown	unknown
YFL010C	__________	+1.30	1335662	1738922	unknown	unknown
YGL205W	POX1______	+1.05	96283	100682	fatty acid metabolism	acyl-CoA oxidase
YHL009C	YAP3______	+1.04	172198	178421	transcription	basic leu zipper transcription factor
YIL103W	__________	+1.03	348541	357429	unknown	unknown; similar to diptheria toxin resistance protein
YJL206C	__________	-1.05	140960	134223	unknown	unknown; similar to Put3p and other transcription
YKL202W	__________	+1.03	76864	79179	unknown	unknown
YLR136C	TIS11_____	+1.41	140993	198872	unknown	unknown
YML011C	__________	-1.06	199531	188067	unknown	unknown
YMR238W	DFG5______	+1.86	793043	1476943	pseudohyphal growth	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YNL295W	__________	+1.14	191395	219065	unknown	unknown
YOR035C	SHE4______	+1.11	159775	176796	asymmetric HO expression	unknown
YPL013C	__________	+1.09	572370	625305	protein synthesis	ribosomal protein, mitochondrial S16
YPR108W	RPN7______	-1.18	1138529	962432	protein degradation	26S proteasome regulatory subunit
YBR085W	AAC3______	-1.05	221706	211103	transport	mitochondrial ADP/ATP translocator
YCR023C	__________	+1.13	295506	334013	unknown	major facilitator superfamily
YDL203C	__________	+1.00	180625	181045	unknown	unknown
YDR322W	MRPL35____	+1.07	239308	256632	protein synthesis	ribosomal protein, mitochondrial L35
YER025W	GCD11_____	-1.24	2164911	1747744	protein synthesis	translation initiation factor eIF2 gamma subunit
YGL013C	PDR1______	+1.25	158392	197609	transport	transcription factor, regulates ABC transporters
YGR124W	ASN2______	-1.09	2770979	2550745	asparagine biosynthesis	asparagine synthetase
YHR139C	SPS100____	-1.03	122501	119237	sporulation	spore wall maturation protein
YJL013C	MAD3______	+1.14	427087	485931	cell cycle	spindle checkpoint complex subunit
YKL012W	PRP40_____	+1.14	269406	308155	mRNA splicing	U1 snRNP protein
YLL013C	__________	+1.14	173916	198121	unknown	unknown; similar to Drosophila pumilio protein
YLR318W	EST2______	-1.01	169455	168003	telomere length regulation	telomerase catalytic subunit
YMR055C	BUB2______	+1.14	162679	185746	cell cycle, checkpoint	unknown
YNL105W	__________	-1.08	127133	117875	unknown	unknown
YOL013C	HRD1______	-1.08	316014	292476	protein degradation	unknown; required to degrade misfolded ER lumenal and integral membrane proteins
YOR223W	__________	+1.33	303952	405258	unknown	unknown; similar to class II family of aminoacyl-tRNA
YPL202C	__________	-1.14	445689	390511	unknown	unknown; similar to Rcs1p
YAR073W	IMD1______	-1.65	2319460	1407344	unknown	unknown; similar to Pur5p, may be an inosine-5'-monophosphate dehydrogenase
YBL023C	MCM2______	+1.26	287634	362950	DNA replication	MCM initiator complex
YBR286W	APE3______	+1.01	2684834	2711370	protein degradation	vacuolar aminopeptidase Y
YDL025C	__________	+1.11	174526	194005	unknown	putative protein kinase
YDR155C	CPH1______	+1.05	965761	1015375	protein folding	peptidyl-prolyl cis-trans isomerase
YDR524C	AGE1______	+1.25	342840	428339	secretion	GTPase activating protein for ARFs
YFL019C	__________	-1.04	120286	115156	unknown	unknown
YGL217C	__________	-1.03	94436	91665	unknown	unknown; similar to mouse kinesin-related protein KIF3
YHL021C	__________	+1.10	271821	298874	unknown	unknown
YIL115C	NUP159____	+1.10	701929	772036	nuclear protein targeting	nuclear pore protein
YJL218W	__________	-1.30	170403	130884	unknown	unknown; similar to E. coli galactoside O-acetyltransferase
YKL214C	__________	-1.14	348239	306503	unknown	unknown
YLR148W	PEP3______	+1.10	245950	271382	vacuole biogenesis	vacuolar membrane protein
YML022W	APT1______	-1.52	1539749	1011747	purine biosynthesis	adenine phosphoribosyltransferase
YMR251W	__________	+1.03	124258	127928	unknown	unknown
YNL307C	MCK1______	-1.34	1063530	796070	meiosis	protein kinase
YOR047C	STD1______	+1.03	479771	493814	glucose repression	modulator of glucose repression
YPL025C	__________	+1.57	203055	319801	unknown	unknown
YPR120C	CLB5______	+1.23	213590	262859	cell cycle	G1/S cyclin
YBR096W	__________	+1.45	688969	1001767	unknown	unknown
YCR033W	__________	+1.24	105348	130404	unknown	unknown
YDL215C	GDH2______	+1.14	137441	156650	glutamate metabolism	NAD-dependent glutamate dehydrogenase
YDR334W	SWR1______	+1.06	413758	437863	RNA processing (putative)	RNA helicase (putative)
YER037W	__________	+1.55	185242	287660	unknown	unknown
YGL025C	PGD1______	+1.55	438773	681427	transcription	RNA polymerase II mediator subunit
YGR136W	__________	+1.55	923157	1429015	unknown	unknown
YHR149C	__________	-1.08	203480	188989	unknown	unknown
YJL025W	RRN7______	-1.09	277377	253541	transcription	component of rDNA transcription factor
YKL024C	URA6______	-1.13	1120701	995576	pyrimidine metabolism	uridine-monophosphate kinase
YLL025W	__________	+1.41	291515	410432	unknown	unknown; similar to Pau3p and members of the PAU1 family
YLR330W	CHS5______	+1.15	969783	1116536	cell wall biogenesis	unknown
YMR067C	__________	+1.01	384832	389457	unknown	unknown
YNL117W	MLS1______	+1.08	122919	132897	glyoxylate cycle	malate synthase
YOL025W	LAG2______	+1.02	90015	92012	aging	unknown
YOR235W	__________	+1.02	116474	118545	unknown	unknown
YPL214C	THI6______	+1.03	382621	393982	thiamine biosynthesis	TMP pyrophosphorylase, hydroxyethylthiazole kinase
YER186C	__________	+1.01	493611	500943	unknown	unknown
YBL035C	POL12_____	+1.19	123164	146128	DNA replication	DNA polymerase alpha, 70 kD subunit
YBR298C	MAL31_____	+1.21	102527	123716	transport	maltose permease
YDL037C	__________	+1.07	96731	103118	unknown	similar to glucan 1,4-alpha-glucosidase
YDR167W	TAF25_____	+1.13	494271	560761	transcription	TFIID 23 kD subunit
YDR536W	STL1______	+1.21	125507	152448	transport	hexose transporter (putative)
YFL030W	__________	+1.44	126197	181951	unknown	unknown; similar to Methanobacterium aspartate transaminase
YGL228W	SHE10_____	-1.02	553774	544978	unknown	causes lethality when overexpressed
YHL032C	GUT1______	+1.04	252804	262412	glycerol utilization	glycerol kinase
YIL127C	__________	-1.43	547729	383859	unknown	unknown
YJR006W	HYS2______	+1.10	382510	419374	DNA replication	polymerase delta 55 KD subunit
YKR001C	VPS1______	+1.03	1133722	1169066	vacuolar protein targeting	GTPase, dynamin family
YLR158C	ASP3-3____	+1.26	2087720	2639045	asparagine utilization	L-asparaginase II
YML033W	__________	+1.33	368281	487977
YMR262W	__________	+1.02	438007	448236	unknown	unknown
YNL319W	__________	-1.01	193526	191343	unknown	unknown
YOR059C	__________	+1.10	606363	665916	unknown	unknown
YPL037C	EGD1______	+1.04	7881901	8176375	transcription	regulator of pol II transcribed genes; enhances Gal4 DNA binding
YPR132W	RPS23B____	+1.05	15863013	16731501	protein synthesis	ribosomal protein S23B
YBR108W	__________	+1.60	124486	199515	unknown	unknown; similar to wheat glutenin, secalin
YCR045C	__________	+1.18	108881	128142	unknown	unknown; similar to protease B (Prb1p) and subtilisin family
YDL227C	HO________	+1.12	87256	97530	mating type switching	homothallic switching endonuclease
YDR346C	__________	-1.31	1506756	1153567	unknown	unknown
YGL037C	PNC1______	+2.09	563733	1177261	pyridine nucleotide cycle	pyrazinamidase and nicotinamidase
YGR148C	RPL24B____	-1.02	15684557	15329336	protein synthesis	ribosomal protein L24B
YHR161C	YAP1801___	+1.05	1067202	1115617	endocytosis and secretion	clathrin assembly protein
YJL037W	__________	-1.02	169507	166170	unknown	unknown
YKL035W	UGP1______	+1.05	871349	919042	pyrimidine metabolism	UGP1, UDP-glucose pyrophosphorylase
YLL037W	__________	+1.14	469341	534002	unknown	unknown; similar to human platelet-activating factor
YLR342W	FKS1______	-2.38	4776246	2006525	cell wall biogenesis	1,3-beta-D-glucan synthase subunit
YMR078C	CTF18_____	+1.00	325728	326095	mitosis, chromosome transmission	unknown
YNL129W	__________	+1.06	242224	257519	unknown	unknown
YOL037C	__________	-1.14	542991	478071	unknown	unknown
YOR247W	SRL1______	+1.53	4689384	7157718	unknown	unknown; similar to Svs1p; suppressor of Rad53 lethality
YPL226W	NEW1______	-1.97	2218987	1126103	unknown	unknown; similar to members of the ATP-binding cassette (AC); prion
YHR218W	__________	-1.39	510612	367029	unknown	unknown; similar to other subtelomerically-encoded proteins
YBL047C	__________	+1.17	95610	112297	unknown	unknown; similar to Uso1p, Pan1p, and mouse eps15
YDL049C	KNH1______	+1.21	97837	117959	cell wall biogenesis	Kre9p homolog
YDR177W	UBC1______	+1.28	778977	996799	protein degradation, ubiquitin-mediated	E2 ub.-conjugating enzyme
YFL040W	__________	+1.26	98549	124101	unknown	unknown; similar to members of the sugar transport family
YGL240W	DOC1______	+1.08	156444	168267	cell cycle	anaphase-promoting complex subunit
YHL044W	__________	-1.04	138042	132772	unknown	unknown; similar to subtelomerically-encoded proteins
YIL139C	REV7______	+1.03	316642	326558	DNA repair	DNA polymerase zeta

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YJR017C	ESS1______	-1.19	836126	701239	protein folding	peptidyl-prolyl cis/trans isomerase
YKR013W	PRY2______	+1.28	1793348	2289485	unknown	unknown; similar to plant PR-pathogen related proteins
YLR170C	APS1______	+1.15	488978	564736	secretion	AP-1 complex subunit
YML043C	RRN11_____	-1.15	307510	266784	transcription	component of rDNA transcription factor
YMR274C	RCE1______	+1.05	224686	235624	protein processing	protease, acts on Ras and a-factor C-termini
YNL331C	AAD14_____	-1.17	464417	397782	unknown	hypothetical aryl-alcohol dehydrogenase
YOR071C	__________	-1.25	367038	294211	transport	thiamine transporter (putative)
YPL049C	DIG1______	-1.14	1017445	892783	invasive growth	MAP kinase-associated protein
YPR142C	__________	-1.01	72502	71614	unknown	unknown
YBR119W	MUD1______	+1.39	254139	353915	mRNA splicing	U1 snRNP A protein
YCR057C	PWP2______	-1.41	258675	183191	cytoskeleton (putative)	unknown
YDL239C	__________	+1.25	133851	167320	unknown	unknown
YDR358W	GGA1______	+1.50	195336	293743	secretion (putative)	unknown; binds ARF
YER057C	HIG1______	+1.23	1062544	1309536	heat shock response	heat-induced protein
YGL049C	TIF4632___	+1.26	131560	165554	protein synthesis	mRNA cap-binding protein (eIF-4F) subunit
YGR160W	__________	-2.55	1786747	701298	unknown	unknown
YHR173C	__________	-1.07	261524	244634	unknown	unknown
YJL050W	MTR4______	-1.66	948536	571925	mRNA export	RNA helicase
YKL047W	__________	-1.00	320062	319702	unknown	unknown
YLL049W	__________	+1.25	498390	620522	unknown	unknown
YLR354C	TAL1______	+1.01	5026498	5078981	pentose phosphate cycle	transaldolase
YMR089C	YTA12_____	-1.02	243583	239250	protein folding	mitochondrial chaperonin
YNL141W	AAH1______	-2.22	1348970	608863	purine metabolism	adenine deaminase
YOL049W	GSH2______	-1.12	1765311	1576252	glutathione biosynthesis	glutathione synthetase
YOR259C	RPT4______	-1.02	913204	899514	protein degradation	26S proteasome regulatory subunit
YPL238C	__________	-1.01	81968	81295	unknown	unknown
YJR160C	__________	-1.22	129793	106763	unknown	unknown; similar to maltose permeases (maltose/H+
YBL059W	__________	+1.19	179783	213602	unknown	unknown
YDL061C	RPS29B____	+1.05	8321674	8718412	protein synthesis	ribosomal protein S29B
YDR188W	CCT6______	-1.10	1634904	1485118	protein folding	cytoplasmic chaperonin complex
YFL052W	__________	+1.16	107705	124964	unknown	unknown; similar to MAL regulatory proteins
YGL252C	RTG2______	+1.12	725609	809589	interorganelle communication	unknown
YHR004C	NEM1______	-1.07	286971	268809	nuclear organization and biogenesis	phosphatase
YIL151C	__________	-1.48	1302557	880199	unknown	unknown; similar to mitochondrial aldehyde dehydrogenase
YJR028W	__________	-1.96	7865307	4017245	transposition	TyA gag protein
YKR025W	RPC37_____	-1.10	983568	890981	transcription	RNA polymerase III 37 kDa subunit
YLR182W	SWI6______	-1.13	397643	351859	cell cycle	transcription factor
YML053C	__________	+1.13	369511	416123	unknown	unknown
YNR004W	__________	-1.10	219372	200023	unknown	unknown; similar to bovine interferon gamma precursor
YOR083W	__________	-1.04	138846	133587	unknown	unknown
YPR154W	__________	+1.02	90306	92264	unknown	unknown; similar to several SH3 domain-containing proteins
YBR131W	CCZ1______	+1.05	161936	170822	calcium, caffeine, and zinc sensitivity	unknown
YDR003W	__________	+1.26	135258	170211	unknown	unknown; similar to Ybr005p
YDR368W	YPR1______	+1.16	862606	997982	unknown	unknown; similar to aldo-keto reductases
YER067W	__________	+1.34	207444	278705	unknown	unknown
YGL061C	DUO1______	+1.14	202789	230452	mitosis	unknown; spindle protein
YGR168C	__________	+1.10	169192	185946	unknown	unknown; similar to human vasoactive intestinal peptide
YHR185C	ADY1______	+1.00	100382	100409	meiosis (putative)	unknown
YJL062W	LAS21_____	-1.17	480800	412159	unknown	major facilitator superfamily
YKL059C	__________	-1.07	299802	278996	unknown	unknown; similar to members of the chaperonin-containing
YLL061W	MMP1______	-1.06	1079284	1019554	transport, amino acid	high affinity S-methylmethionine permease
YLR366W	__________	-1.07	109409	102551	unknown	unknown
YMR101C	SRT1______	-1.21	103999	85916	protein glycosylation	cis-prenytransferase (putative)
YNL153C	GIM3______	-1.02	622843	609553	protein folding	prefoldin subunit 4
YOL059W	GPD2______	-1.11	882388	798333	glycerol metabolism	glycerol-3-phosphate dehydrogenase
YOR271C	__________	-1.64	1857839	1134705	unknown	unknown; similar to rat tricarboxylate carrier
YBL071C	__________	+1.05	334916	353105	unknown	unknown
YDL073W	__________	+1.16	118549	137893	unknown	unknown
YDR200C	__________	+1.20	219107	264003	unknown	unknown
YFL064C	__________	+1.17	210048	244746	unknown	unknown; similar to other subtelomerically-encoded proteins
YGR001C	__________	-1.11	974085	874598	unknown	unknown
YHR015W	MIP6______	-1.14	133949	117695	mRNA export, putative	RNA-binding protein
YIL162W	SUC2______	-1.74	560497	322417	sucrose utilization	invertase
YJR040W	GEF1______	-1.02	392012	383517	transport	CLC chloride channel, iron transporter
YKR037C	SPC34_____	-1.10	315407	287880	cytoskeleton	spindle pole body component
YLR194C	__________	+4.41	787610	3471470	unknown	unknown
YML064C	TEM1______	-1.02	76648	75390	cell cycle	GTP-binding protein, RAS superfamily
YMR296C	LCB1______	-1.19	1506935	1261190	sphinogolipid metabolism	serine palmitoyltransferase component
YNR016C	ACC1______	+1.02	89898	91454	fatty acid metabolism	acetyl-CoA carboxylase
YOR095C	RKI1______	-1.59	1184287	744988	pentose phosphate cycle	ribose-5-phosphate ketol-isomerase
YPL071C	__________	-1.03	86165	84047	unknown	unknown
YPR162C	ORC4______	-1.08	88444	82160	DNA replication	origin recognition complex 56 kD subunit
YBR143C	SUP45_____	-1.02	763676	748098	protein synthesis	translation release factor eRF1 subunit
YCR081W	SRB8______	+1.01	129739	131445	transcription	RNA polymerase II mediator subunit
YDR015C	__________	+1.19	124896	148430	unknown	unknown
YDR380W	__________	-2.05	1128953	551224	unknown	unknown; similar to pyruvate decarboxylase, pyruvate
YER077C	__________	+1.41	190953	269787	unknown	unknown; similar to class I tRNA synthetases
YGL073W	HSF1______	+1.17	121208	142371	heat shock	transcription factor
YGR180C	RNR4______	-1.34	1726595	1285989	DNA replication	ribonucleotide reductase
YHR197W	__________	-1.63	500750	307284	unknown	unknown
YJL074C	SMC3______	-1.11	238843	214386	chromatin structure	cohesin
YKL071W	__________	+1.03	184315	190116	unknown	unknown
YLR006C	SSK1______	-1.05	275672	263795	signaling	two-component pathway
YLR378C	SEC61_____	-1.39	2338564	1684620	secretion	ER protein translocation complex subunit
YMR113W	FOL3______	-1.15	76318	66619	folate metabolism	dihydrofolate synthetase
YNL165W	__________	-1.11	445433	399601	unknown	unknown
YOL071W	__________	-1.11	78557	70775	unknown	unknown
YOR283W	__________	-1.04	747111	719451	unknown	unknown; similar to phosphoglycerate mutases
YPL259C	APM1______	-1.18	82402	69692	secretion	AP-1 complex subunit
YBL083C	__________	-1.01	399422	394133	unknown	unknown
YDL085W	__________	+1.17	136455	159683	unknown	unknown; similar to NADH dehydrogenase (ubiquinone)
YFR008W	__________	+1.14	407030	463776	unknown	unknown
YGR013W	SNU71_____	-1.03	102925	99872	mRNA splicing	U1 snRNP protein
YHR026W	PPA1______	-1.22	3556491	2926822	vacuolar acidification	vacuolar H+-ATPase proteolipid protein
YIL173W	VTH1______	-1.04	552618	528823	vacuolar protein targeting	unknown; similar to Vps10p
YJR052W	RAD7______	+1.24	309548	384532	DNA repair, nucleotide excision	NEF4 component
YKR049C	__________	-1.05	100267	95569	unknown	unknown
YLR206W	ENT2______	-1.02	126720	124094	endocytosis (putative)	unknown; epsin homolog
YML076C	__________	+1.11	81041	90331	unknown	unknown; similar to transcription factors, has Zn[2]-Cys[6]
YNR028W	CPR8______	-1.18	79360	67258	protein folding	peptidyl-prolyl cis-trans isomerase

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YOR107W	RGS2______	-1.04	200973	194044	signaling	GTPase-activating protein (GAP) for Gpa2p
YPL083C	SEN54_____	-1.15	78761	68652	tRNA splicing	splicing endonuclease subunit
YPR174C	__________	-1.15	79022	68759	unknown	unknown; similar to C. elegans nuclear lamin
YBR155W	CNS1______	-1.03	77839	75583	unknown	unknown; similar to Sti1p; suppresses cyclophilin mutant
YCR092C	MSH3______	+1.06	81056	86013	DNA repair, mismatch	MutS homolog
YDR027C	LUV1______	-1.07	623971	585666	vacuole biogenesis (putative)	unknown
YDR392W	SPT3______	+1.25	358351	447852	chromatin structure	histone acetyltransferase complex subunit
YER088C	DOT6______	+1.02	73328	75055	silencing (telomere)	nuclear protein with Myb DNA-binding domain
YGL085W	__________	+1.14	211079	240948	unknown	unknown; similar to Staphylococcus hyicus thermonuclease
YGR192C	TDH3______	-1.12	136125	121336	glycolysis	glyceraldehyde-3-phosphate dehydrogenase 3
YHR209W	__________	-1.21	11187414	9264043	unknown	unknown; similar to Yer175p
YJL086C	__________	+1.00	104004	104307	unknown	unknown
YKL083W	__________	+1.16	148624	172533	unknown	unknown
YLR018C	POM34_____	+1.15	109250	126089	nuclear protein targeting	nuclear pore protein
YLR390W	ECM19_____	+1.04	467646	487167	cell wall biogenesis	unknown
YMR124W	__________	-1.31	87505	66782	unknown	unknown
YNL177C	__________	-1.15	77982	67554	unknown	unknown
YOL083W	__________	-1.07	78605	73610	unknown	unknown
YOR295W	__________	-1.20	85944	71673	unknown	unknown
YPL271W	ATP15_____	-1.18	86617	73415	ATP synthesis	F1-ATP synthase epsilon subunit
YAL002W	VPS8______	+1.47	76076	112124	vacuolar protein targeting	unknown
YBR167C	POP7______	+1.43	209672	299426	rRNA and tRNA processing	RNase P and RNase MRP subunit
YCR104W	PAU3______	+1.56	186675	290995	unknown	unknown; similar to bovine alcohol dehydrogenase
YDR038C	ENA5______	+1.17	236648	276499	transport	Na(+) ATPase
YDR405W	MRP20_____	+1.23	237927	293129	protein synthesis	ribosomal protein, mitochondrial L23
YER100W	UBC6______	+1.14	573971	653540	protein degradation, ubiquitin-mediated	ubiquitin-conjugating enzyme
YGL098W	__________	+1.07	214520	228851	unknown	unknown
YGR205W	__________	+1.09	141317	153919	unknown	unknown; similar to E. coli putrescine transport protein
YIL002C	INP51_____	+1.33	276894	368907	phosphatidylinositol metabolism	phosphatidylinositol 4,5-bisphosphate 5-phosphatase
YJL099W	CHS6______	+1.66	170527	283705	cell wall biogenesis	chitin biosynthesis
YKL096W	CWP1______	+6.61	1822739	12056422	cell wall protein	beta-1,6-glucan acceptor
YLR031W	__________	+2.86	141714	404719	unknown	unknown
YLR403W	SFP1______	-1.04	296282	284735	unknown	overexpression inhibits nuclear protein localization
YMR136W	GAT2______	+1.19	684913	813309	transcription (putative)	transcription factor (putative_; GATA zinc finger protein
YNL190W	__________	-1.14	4026184	3532633	unknown	unknown
YOL096C	COQ3______	+1.08	345022	373673	ubiquinone biosynthesis	3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase
YOR306C	__________	+1.19	499994	595916	unknown	unknown; similar to human X-linked PEST-containing
YPR001W	CIT3______	+1.02	211977	215568	TCA cycle	citrate synthase
YBL096C	__________	+1.13	124716	141297	unknown	unknown
YDL098C	SNU23_____	+1.37	192063	264003	mRNA splicing (putative)	U4/U6.U5 snRNP protein
YDR221W	__________	+1.05	178825	188489	unknown	unknown; similar to the beta subunit of human glucosidase
YEL002C	WBP1______	-1.19	473870	397270	protein glycosylation	oligosaccharyltransferase complex subunit
YFR021W	__________	+1.06	201600	212997	unknown	unknown
YGR026W	__________	+1.05	804318	847291	unknown	unknown
YHR039C	VMA10_____	+1.12	2286026	2556240	vacuolar acidification	vacuolar H-ATPase 13 kDa subunit
YIR009W	MSL1______	+1.10	181236	200092	mRNA splicing	U2 snRNP protein
YJR065C	ARP3______	+1.19	1067839	1266068	cytoskeleton	actin-related protein
YKR062W	TFA2______	+1.09	397833	432425	transcription	TFIIE 43 kD subunit
YLR219W	__________	+1.12	232143	259102	unknown	unknown
YML089C	__________	-1.09	110075	100688	unknown	unknown
YNL002C	RLP7______	-1.57	1175098	750406	protein synthesis	ribosomal protein L7 (putative)
YNR041C	COQ2______	-1.02	391793	384233	ubiquinone biosynthesis	para-hydroxybenzoate polyprenyltransferase
YOR120W	GCY1______	+1.28	242182	309678	unknown	unknown; similar to mammalian aldo-keto reductases
YPL096W	PNG1______	-1.02	341903	334349	protein modification	peptide:N-glycanase
YPR187W	RPO26_____	-1.04	2220127	2144252	transcription	Shared subunit of RNA polymerases I, II, and III
YAL015C	NTG1______	+1.58	133103	210753	DNA repair	DNA glycosylase
YBR179C	FZO1______	+1.13	227293	256416	mitochondrial biogenesis	mitochondrial membrane GTPase
YCRX09C	__________	+1.93	139726	270255
YDR050C	TPI1______	+1.10	15013682	16577467	glycolysis	triosephosphate isomerase
YDR417C	__________	+1.09	12664058	13789704	unknown	unknown
YER112W	LSM4______	+1.25	631614	791116	mRNA splicing	U6 snRNP protein
YGL110C	__________	+1.13	342707	387530	unknown	unknown
YGR217W	CCH1______	+1.05	396331	416226	transport	(putative) Ca(2+) channel protein
YJL111W	CCT7______	-1.19	1381113	1158635	protein folding	cytoplasmic chaperonin complex
YKL107W	__________	+1.24	110075	136165	unknown	unknown
YLR041W	__________	+1.02	478096	489945	unknown	unknown
YLR413W	__________	-1.79	1557095	870099	unknown	unknown
YMR148W	__________	+1.13	274241	310303	unknown	unknown
YNL202W	SPS19_____	-1.08	159230	148073	sporulation	peroxisomal 2,4-dienoyl-CoA reductase
YOL106W	__________	-1.27	8722488	6862170	unknown	unknown
YOR318C	__________	-1.02	174341	170309	unknown	unknown
YPR013C	__________	+1.11	281239	312914	unknown	unknown; similar to mouse REX1 encoded transcription factor
YBL106C	SRO77_____	+1.08	130693	140937	secretion (putative)	unknown; homolog of Drosophila tumor suppressor l(2)gl
YCL013W	__________	+1.09	111206	121387
YDL110C	__________	+2.46	278984	686891	unknown	unknown
YDR233C	__________	+1.01	2018920	2046886	unknown	unknown
YEL014C	__________	+1.31	211378	277461	unknown	unknown
YFR032C	__________	+1.29	109124	140261	unknown	unknown
YGR036C	CAX4______	-1.09	164593	151499	cell wall biogenesis	unknown
YIR020C	__________	+1.14	128288	146088	unknown	unknown
YJR077C	MIR1______	+1.11	1311901	1459442	transport	mitochondrial phosphate transporter
YKR074W	__________	+1.13	641261	722565	unknown	unknown
YLR229C	CDC42_____	+1.01	1176242	1188983	signaling, filamentous or polarized growth	GTPase, Rho subfamily
YNL014W	__________	-1.14	618274	542021	unknown	unknown; similar to translation elongation factor Yef3p,
YNR053C	__________	-1.42	1465421	1032373	unknown	unknown; similar to human breast tumor-associated
YOR132W	VPS17_____	+1.12	453081	509453	vacuolar protein targeting	peripheral membrane protein
YPL108W	__________	-1.04	287918	276632	unknown	unknown
YPR199C	ARR1______	+1.16	294472	342220	transcription	basic leu zipper transcription factor
YAL027W	__________	+1.08	210344	227908	unknown	unknown
YBR191W	RPL21A____	+1.02	14880242	15140668	protein synthesis	ribosomal protein L21A
YCRX21C	__________	+1.06	411751	437467
YDR062W	LCB2______	-1.35	572351	422822	sphingolipid biosynthesis	serine C-palmitoyltransferase subunit
YDR429C	TIF35_____	-1.19	2348797	1975864	protein synthesis	translation initiation factor eIF3 subunit
YER123W	YCK3______	+1.34	335960	450191	cell proliferation	plasma membrane-bound casein kinase I
YGL122C	NAB2______	-1.05	85040	81102	mRNA processing	poly(A)+RNA binding protein
YGR229C	SMI1______	+1.30	299920	388511	cell wall biogenesis	may regulate glucan and chitin synthesis
YIL025C	__________	+1.03	86611	89569	unknown	unknown
YJL123C	__________	+1.11	253452	281706	unknown	unknown
YKL119C	VPH2______	+1.10	277256	306077	vacuolar acidification	vacuolar H+-ATPase assembly protein
YLR053C	__________	+1.06	127620	135269	unknown	unknown; similar to xylose isomerase

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YNL214W	PEX17_____	-1.04	195795	187802	peroxisome biogenesis	peripheral membrane protein
YOL118C	__________	-1.19	142842	119832	unknown	unknown
YOR330C	MIP1______	-1.21	521617	430140	DNA replication	mitochondrial DNA polymerase catalytic subunit
YPR025C	CCL1______	+1.01	301210	304648	transcription	TFIIH subunit
YBR005W	__________	+1.48	236848	349921	unknown	unknown
YCL026C	FRM2______	+1.06	93174	98554	signaling, fatty acid-mediated	unknown
YDL122W	UBP1______	+1.07	130815	140075	protein degradation, ubiquitin-mediated	ubiquitin-specific protease
YEL025C	SRI1______	+1.19	451043	535488	unknown	unknown; interacts with SWI/SNF and RSC
YFR042W	__________	+1.30	213918	279037	unknown	unknown
YGR043C	__________	+1.78	99053	176435	unknown	unknown; similar to Tal1p
YHR060W	VMA22_____	-1.02	375315	366320	vacuolar acidification	vacuolar H+-ATPase assembly protein
YIR030C	DCG1______	+1.02	140044	142726	unknown	may be involved in catabolite repression
YJR090C	GRR1______	+1.07	149368	159557	glucose repression (and cell cycle)	cyclin F box protein
YKR086W	PRP16_____	-1.04	812943	779543	mRNA splicing	RNA helicase
YLR241W	__________	+1.19	285484	338542	unknown	major facilitator superfamily
YML110C	COQ5______	-1.04	1307044	1255924	ubiquinone biosynthesis	methyltransferase
YNL026W	__________	+1.12	153323	171227	unknown	unknown
YNR065C	__________	+1.63	237237	387529	unknown	unknown; similar to Pep1p
YPL120W	VPS30_____	+1.07	222703	237977	vacuolar protein targeting	unknown?
YAL036C	FUN11_____	-1.47	555955	378004	unknown	unknown; similar to Xenopus laevis GTP-binding protein DRG
YBR203W	__________	+1.06	86891	92402	unknown	unknown
YDR074W	TPS2______	+1.45	263372	382320	trehalose metabolism	trehalose-6-phosphate phosphatase
YDR441C	APT2______	+1.15	424167	488976	purine metabolism	unknown; similar to adenine phosphoribosyltransferase
YER135C	__________	+1.01	98033	99392	unknown	unknown
YGL134W	PCL10_____	+1.09	204025	222786	cell cycle	cyclin (Pho85p)
YGR241C	YAP1802___	+1.20	237860	284420	endocytosis and secretion	clathrin assembly protein
YIL037C	__________	+1.11	124392	138609	unknown	unknown
YJL135W	__________	-1.05	89452	85066	unknown	unknown
YKL131W	__________	-1.16	95199	82243	unknown	unknown
YLR065C	__________	+1.07	797661	851878	unknown	unknown
YLR435W	__________	-1.38	922619	666718	unknown	unknown
YMR170C	ALD2______	+1.18	335476	394776	ethanol utilization	aldehyde dehydrogenase
YNL226W	__________	-1.15	143766	124480	unknown	unknown
YOL130W	ALR1______	-1.15	177500	154741	aluminum resistance	ion transporter, putative
YOR342C	__________	-1.04	542662	520020	unknown	unknown
YPR037C	__________	-1.05	788337	749786	unknown	unknown; similar to Erv1p and rat ALR protein
YBR015C	MNN2______	-1.04	693542	663810	protein glycosylation	Golgi alpha-1,2-mannosyltransferase (putative)
YCL038C	__________	+1.04	84985	88393	unknown	unknown
YDR257C	RMS1______	-1.04	291121	278886	transcription	(putative) transcriptional regulator
YEL037C	RAD23_____	-1.20	760649	632365	DNA repair, nucleotide excision	ubiquitin-like protein
YFR054C	__________	+1.03	101279	104282	unknown	unknown
YGR055W	MUP1______	+1.18	746945	882530	transport	methionine permease
YIR042C	__________	+1.28	131526	167723	unknown	unknown
YJR101W	__________	-1.03	89267	86634	unknown	unknown; similar to superoxide dismutase
YKR098C	UBP11_____	+1.21	166169	201370	protein degradation, ubiquitin-mediated	ubiquitin-specific protease
YLR253W	__________	+1.04	196890	204977	unknown	unknown; similar to Abc1p
YML121W	GTR1______	+1.10	534375	590056	phosphate transport	GTP-binding protein
YNL036W	NCE103____	+2.39	345694	825781	secretion, non-classical	unknown
YNR077C	__________	+1.02	74622	76335	unknown	unknown
YOR154W	__________	-1.17	226071	193927	unknown	unknown
YPL132W	COX11_____	-1.05	307356	292474	respiration	cytochrome-c oxidase assembly
YAL047C	SPC72_____	+1.14	178163	202404	cytoskeleton	spindle pole body component
YBR215W	HPC2______	+1.14	103310	117612	transcription	regulator of histone transcription
YDR086C	SSS1______	+1.43	1260355	1803444	secretion	ER protein translocation complex subunit
YDR453C	__________	+1.12	236897	265469	unknown	unknown; similar to Tsa1p
YER145C	FTR1______	-1.13	882707	783926	transport	iron permease
YGL146C	__________	-1.02	104556	102683	unknown	unknown; similar to Bunyamwera virus RNA-directed RNA
YGR253C	PUP2______	+1.17	990284	1162908	protein degradation	20S proteasome subunit(alpha5)
YIL049W	DFG10_____	+1.24	269302	333789	filamentous growth	unknown
YJL147C	__________	+1.09	201211	219725	unknown	unknown
YKL143W	LTV1______	-1.58	917464	580638	unknown	unknown; required for viability at low temperature
YLR077W	__________	+1.09	231546	253349	unknown	unknown
YLR447C	VMA6______	-1.05	3675426	3502883	vacuolar acidification	vacuolar H+-ATPase V0 domain 36 KD subunit
YMR180C	CTL1______	+1.26	310130	391769	unknown	RNA triphosphatase
YNL238W	KEX2______	+1.04	92739	96728	secretion	late Golgi endoproteinase
YOL142W	RRP40_____	-1.28	535026	419469	rRNA processing	exosome complex component
YOR352W	__________	+1.00	256198	256430	unknown	unknown
YPR049C	__________	-1.11	1065490	962262	unknown	unknown
YBR027C	__________	+1.04	119687	124625	unknown	unknown
YCL050C	APA1______	-1.05	504115	479572	purine metabolism	ATP adenylyltransferase I
YDL144C	__________	+1.06	471210	498514	unknown	unknown
YDR265W	PEX10_____	+1.19	142626	169747	peroxisome biogenesis	integral membrane protein
YEL049W	PAU2______	+1.26	244987	309202	unknown	unknown; similar to members of the Srp1p/Tip1p family
YGR067C	__________	+1.06	113392	119876	unknown	unknown
YHR081W	__________	-1.18	590467	499108	unknown	unknown
YJR113C	__________	+1.03	497877	512318	protein synthesis	ribosomal protein, mitochondrial S7 (putative)
YLR262C	YPT6______	+1.06	647173	683717	secretion	GTP-binding protein, rab family
YNL048W	ALG11_____	-1.19	412456	346400	protein glycosylation	unknown
YOR166C	__________	+1.00	313439	314448	unknown	unknown
YPL144W	__________	+1.03	100551	103428	unknown	unknown
YAL061W	__________	+1.16	306265	353935	unknown	unknown; similar to alcohol/sorbitol dehydrogenase
YBR227C	MCX1______	-1.01	273028	269375	protein folding	chaperone, mitochondrial (putative)
YDR098C	GRX3______	+1.12	1052360	1176252	oxidative stress response	glutaredoxin
YDR465C	RMT2______	-1.47	359642	244435	arginine metabolism	arginine methyltransferase
YER155C	BEM2______	-1.01	91376	90083	bud emergence	GTPase-activating protein for Rho1p
YGL158W	RCK1______	+1.11	103536	115080	unknown	protein kinase
YGR265W	__________	-1.40	276750	197127	unknown	unknown
YIL061C	SNP1______	-1.14	255269	224217	mRNA splicing	U1 snRNP protein
YJL159W	HSP150____	+1.74	9004577	15649938	heat shock response	secreted glycoprotein of HSP family
YKL155C	__________	+1.21	418351	506849	unknown	unknown
YLR089C	__________	-1.56	1205273	774671	unknown	unknown; similar to alanine aminotransferase
YLR459W	CDC91_____	+1.06	147329	156180	unknown	unknown; major facilitator superfamily
YMR192W	__________	+1.26	223490	282355	unknown	unknown; similar to mouse Tbc1 protein
YNL250W	RAD50_____	+1.08	96545	104526	DNA repair	DNA binding protein
YOL154W	__________	+1.03	184200	189151	unknown	unknown; similar to Sartorya fumigata Asp FII
YOR364W	__________	-1.03	116873	113882	unknown	unknown
YPR061C	__________	+1.05	158704	166590	unknown	unknown; similar to E. coli DnaJ and other DnaJ-like
YBR039W	ATP3______	+1.34	1313540	1765254	ATP synthesis	mitochondrial F1F0 ATP synthase subunit
YCL062W	__________	+1.14	260346	297549
YDL156W	__________	-1.01	123013	121445	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YDR277C	MTH1______	+1.24	162268	201626	hexose transport	transcriptional repressor
YEL060C	PRB1______	+1.99	225688	448871	protein degradation	vacuolar protease B
YGR079W	__________	-1.22	588755	482615	unknown	unknown
YHR093W	AHT1______	-1.02	106241	103667	unknown	unknown
YJR125C	ENT3______	+1.00	817403	819726	endocytosis (putative)	unknown; epsin homolog
YLR273C	PIG1______	-1.02	119699	117776	glucose repression	(putative) Glc7p regulatory subunit
YMR012W	CLU1______	-1.26	2440242	1937507	protein synthesis	translation initiation factor eIF3 subunit
YNL058C	__________	+2.13	755233	1610749	unknown	unknown
YOR178C	GAC1______	+1.08	213165	230428	glycogen metabolism	Glc7p regulatory subunit
YPL156C	__________	+1.10	397618	436493	unknown	unknown
YAR007C	RFA1______	+1.15	241414	278390	DNA replication	replication factor A, 69 kD subunit
YBR239C	__________	+1.12	203589	229029	unknown	unknown; similar to transcription factors, has Zn[2]-Cys[6]
YDR108W	GSG1______	+1.09	212770	232420	meiosis	unknown
YDR477W	SNF1______	+1.04	401001	415911	glucose derepression	protein kinase
YER165W	PAB1______	-1.32	3402542	2573362	mRNA 3'-end processing	cleavage/polyadenylation factor CF IA component
YGL170C	__________	-1.20	159341	132501	unknown	unknown; similar to phosphoribulokinase precursor
YGR277C	__________	-1.19	508225	425733	unknown	unknown; similar to Ctr1p
YIL071C	__________	-1.06	208164	196057	unknown	unknown
YJL171C	__________	+1.44	350957	505219	unknown	unknown
YKL167C	MRP49_____	+1.13	336036	378609	protein synthesis	ribosomal protein, mitochondrial large subunit
YLR101C	__________	+1.08	1310193	1420591	unknown	unknown
YMR203W	TOM40_____	-1.26	1384519	1094516	mitochondrial protein targeting	outer membrane translocase component
YNL262W	POL2______	-1.06	100598	94464	DNA replication	polymerase epsilon catalytic subunit
YOL166C	__________	-1.10	165569	150000	unknown	unknown
YOR376W	__________	-1.08	114149	105745	unknown	unknown; similar to Na+/K+-exchanging ATPases
YPR073C	LTP1______	+1.18	768223	907706	unknown	protein phosphatase
YBR051W	__________	+1.19	98090	117166	unknown	unknown
YCLX01W	__________	-1.03	320646	312300
YDL168W	SFA1______	-1.04	743585	717053	formaldehyde metabolism	long-chain alcohol dehydrogenase
YDR289C	RTT103____	+1.23	269067	330048	transposition (putative)	unknown; similar to Spt8p
YEL072W	__________	+1.25	142169	177946	unknown	unknown
YGR091W	PRP31_____	-1.15	181885	157786	mRNA splicing	U4/U6, U5 snRNP protein
YHR105W	__________	-1.29	135061	104804	unknown	unknown; similar to Grd19p and bacterial helix-turn-helix
YJR137C	ECM17_____	-1.06	113216	106731	cell wall biogenesis	unknown
YLR285W	__________	-1.23	784376	637755	unknown	unknown
YMR024W	MRPL3_____	-1.07	421841	394049	protein synthesis	ribosomal protein, mitochondrial L3
YNL070W	TOM7______	-1.03	354799	344884	mitochondrial protein targeting	small subunit of translocase
YOR190W	SPR1______	-1.08	140307	130312	sporulation	exo-1,3-beta-glucanase
YPL168W	__________	+1.00	222206	222973	unknown	unknown
YAR029W	__________	+1.03	110151	113017	unknown	unknown; similar to subtelomerically-encoded proteins
YBR251W	MRPS5_____	+1.05	287331	302549	protein synthesis	ribosomal protein, mitochondrial S5
YDR120C	TRM1______	-1.51	583808	386859	tRNA processing	tRNA methyltransferase
YDR489W	__________	+1.11	201546	222709	unknown	unknown
YER175C	__________	+1.22	187771	228173	unknown	unknown; similar to Yhr209p
YGL182C	__________	-1.11	117387	105602	unknown	unknown
YGR289C	MAL11_____	-1.13	127851	113058	transport	alpha-glucoside permease
YJL183W	MNN11_____	-1.26	934020	740648	unknown	mannosyltransferase complex subunit
YKL179C	__________	-1.05	322204	306143	unknown	unknown; similar to kinesin and human kinesin-related
YLR113W	HOG1______	-1.08	1037785	964415	signaling, high osmolarity pathway	MAPK (mitogen-activated protein kinase)
YMR215W	__________	-1.38	605793	440243	unknown	unknown; similar to Gas1p
YNL274C	__________	-1.15	89036	77184	unknown	putative alpha-ketoisocaproate reductase
YOR012W	__________	-1.15	91679	80027	unknown	unknown
YOR388C	FDH1______	-1.14	94754	83042	unknown	unknown; similar to formate dehydrogenases
YPR085C	__________	-1.04	224995	216805	unknown	unknown
YBR063C	__________	-1.02	257171	252497	unknown	unknown; similar to phosphopanthethein-binding proteins
YCR001W	__________	+1.10	88237	97086	unknown	unknown
YDL180W	__________	-1.06	382948	359904	unknown	unknown
YDR301W	CFT1______	+1.13	139970	158637	mRNA 3'-end processing	cleavage/polyadenylation factor CF II component
YER006W	__________	-1.38	1536371	1113984	unknown	unknown; similar to mouse Mmr1p protein
YGR103W	__________	-1.87	2580336	1378757	unknown	unknown
YHR117W	TOM71_____	-1.03	123456	119335	mitochondrial protein targeting	outer membrane translocase component
YJR149W	__________	-1.29	227047	176335	unknown	unknown; similar to 2-nitropropane dioxygenase
YLR296W	__________	+1.11	148473	165018	unknown	unknown
YMR035W	IMP2______	-1.01	202763	200018	protein processing	mitochondrial inner membrane protease
YNL082W	PMS1______	-1.08	82766	76872	DNA repair	MutL homolog; mismatch repair
YOR200W	__________	+1.04	203900	211766	unknown	unknown
YPL180W	__________	-1.03	86342	84162	unknown	unknown
YBL002W	HTB2______	+1.27	120647	153186	chromatin structure	histone H2B
YBR263W	SHM1______	-1.08	602642	558084	one-carbon interconversion	serine hydroxymethyltransferase
YDL002C	NHP10_____	+1.43	345518	493973	chromatin structure	non-histone protein
YDR132C	__________	+1.21	175380	211751	unknown	unknown
YDR501W	PLM2______	-1.07	191030	178280	plasmid maintenance (putative)	unknown
YFL-TYB	TY2B______	+1.14	14124094	16051703
YGL194C	HOS2______	+1.15	140760	162312	chromatin structure	putative histone deacetylase
YIL093C	__________	+1.05	216328	228132	unknown	unknown
YJL195C	__________	+1.06	126268	133277	unknown	unknown
YKL191W	DPH2______	-1.54	805675	523335	diphthamide biosynthesis	unknown
YLR125W	__________	-1.01	109351	108513	unknown	unknown
YML002W	__________	-1.06	275252	260315	unknown	unknown
YMR227C	TAF67_____	-1.04	323637	311542	transcription	TFIID 67 kD subunit
YOR024W	__________	+1.06	162689	172946	unknown	unknown
YPL002C	SNF8______	+1.05	117337	123631	glucose derepression	unknown
YPR097W	__________	-1.35	845247	627363	unknown	unknown
YBR075W	__________	-1.04	554120	531140	unknown	unknown
YCR013C	__________	+1.11	14996658	16616132	unknown	unknown
YDL192W	ARF1______	+1.21	5683487	6869366	secretion	ADP-ribosylation factor
YDR313C	PIB1______	+1.45	252904	365706	signaling	phosphatidylinositol(3)-phosphate binding
YER015W	FAA2______	+1.12	178465	200130	fatty acid metabolism	acyl-CoA synthetase
YGL002W	ERP6______	+1.24	272985	338716	membrane trafficking; secretion (putative)	unknown
YGR113W	DAM1______	+1.01	219517	222391	unknown	unknown; interacts with Duo1p and Mps1p
YHR129C	ARP1______	+1.07	264305	281693	cytoskeleton	actin-related protein
YJL002C	OST1______	-1.30	853292	654741	protein glycosylation	oligosaccharyltransferase complex subunit
YKL002W	__________	+1.28	587767	753604	unknown	unknown
YLL002W	REM50_____	+1.10	185143	203825	diepoxybutane and mitomycin C resistance	unknown
YLR308W	CDA2______	+1.09	90509	98502	sporulation	chitin deacetylase
YMR046C	__________	-1.69	6570558	3891040	unknown	unknown
YNL094W	__________	+1.05	431754	453661	unknown	unknown
YOL002C	__________	-1.06	730713	686693	unknown	unknown
YOR212W	STE4______	-1.18	664852	564985	signaling, pheromone pathway	beta subunit of G protein
YPL191C	__________	-1.00	183981	183899	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YAR052C	__________	+1.02	186590	190933
YBL012C	__________	+1.06	111297	117864	unknown	unknown
YBR275C	RIF1______	+1.07	213725	229316	silencing	RAP1-interacting protein
YDL014W	NOP1______	-1.51	5794025	3830428	rRNA processing, 35S	fibrillarin homolog
YDR144C	MKC7______	-1.13	824460	727805	protein degradation	periplasmic aspartyl protease
YDR513W	TTR1______	+1.67	643854	1072404	electron carrier	glutaredoxin
YFL011W	HXT10_____	+1.10	129999	143624	transport	hexose permease
YGL206C	CHC1______	+1.04	84131	87092	endocytosis and secretion	clathrin heavy chain
YHL010C	__________	+1.04	80203	83707	unknown	unknown
YIL104C	__________	+1.24	1692420	2106945	unknown	unknown
YJL207C	__________	+1.06	84018	88980	unknown	major facilitator superfamily
YKL203C	TOR2______	+1.06	83709	88919	signaling, cell cycle, meiosis and actin cytoskeleton organization	phosphatidylinositol 3-kinase
YLR137W	__________	+1.15	222815	256423	unknown	unknown
YMR239C	RNT1______	-1.12	200295	178103	rRNA processing	ribonuclease III
YNL296W	__________	-1.03	110845	107688	unknown	unknown
YOR036W	PEP12_____	+1.61	357368	575868	vacuolar protein targeting	t-SNARE
YPL014W	__________	+1.61	453647	731061	unknown	unknown
YPR109W	__________	+1.08	398293	430351	unknown	unknown
YBR086C	IST2______	+1.15	513789	589893	salt tolerance (putative)	unknown; similar to calcium and sodium channel proteins
YCR024C	__________	+1.44	165869	238976	protein synthesis	tRNA synthetase, mitochondrial, asparaginyl
YDL204W	__________	+1.27	102109	129374	unknown	unknown
YDR323C	PEP7______	+1.23	157069	193123	vacuolar protein targeting	vacuolar segregation protein
YER026C	CHO1______	+1.46	705818	1029916	phospholipid metabolism	phosphatidylserine synthase
YGL014W	__________	+1.03	669048	687788	aging	Sir3p and Sir4p localization
YGR125W	__________	+1.15	335938	386149	unknown	unknown; sulfate permease family
YJL014W	CCT3______	-1.28	1451452	1129994	protein folding	cytoplasmic chaperonin complex
YKL013C	ARC19_____	+1.21	703160	851871	cytoskeleton	cortical actin patch integrity
YLL014W	__________	+1.01	304050	307641	unknown	unknown
YLR319C	BUD6______	-1.03	263000	255607	bud site selection, bipolar	actin-interacting protein
YMR056C	AAC1______	+1.06	253363	268073	transport	mitochondrial ADP/ATP translocator
YNL106C	INP52_____	-1.20	2324462	1939903	endocytosis (putative)	inositol polyphosphate 5-phosphatase
YOL014W	__________	-1.24	455955	366908	unknown	unknown
YOR224C	RPB8______	-1.45	2102336	1453762	transcription	shared subunit of RNA polymerase I,II, and III
YPL203W	PKA3______	+1.08	589292	634785	signaling, nutrient control of cell growth	cAMP-dependent protein kinase catalytic subunit
YAR074C	__________	-1.61	1877948	1164957
YBL024W	NCL1______	-1.14	1027299	904205	unknown	unknown; similar to human proliferating cell nucleolar antigen
YBR287W	__________	+1.48	505001	747940	unknown	unknown
YDL026W	__________	+1.15	130376	149635	unknown	unknown
YDR156W	RPA14_____	-1.08	458046	425322	transcription	RNA polymerase I subunit A14
YDR525W	__________	+1.08	95004	102274	unknown	unknown
YFL020C	PAU5______	+1.34	275623	369804	unknown	unknown; similar to members of the Srp1p/Tip1p family
YGL218W	__________	+1.00	184192	184531	unknown	unknown
YHL022C	SPO11_____	+1.25	110089	137535	meiosis, recombination	ds break formation complex catalytic subunit
YIL116W	HIS5______	-1.03	541315	526152	histidine biosynthesis	histidinol-phosphate aminotransferase
YJL219W	HXT9______	+1.03	144147	147903	transport	hexose permease
YKL215C	__________	+1.02	248155	253700	unknown	unknown; similar to Pseudomonas hydantoinases hyuA-hyuB
YLR149C	__________	+1.34	117690	157596	unknown	unknown
YML023C	__________	-1.01	173973	172877	unknown	unknown
YNL308C	KRI1______	-1.58	1294178	819223	unknown	unknown; similar to Mgm1p
YOR048C	RAT1______	-1.52	1245734	818388	transcription	exonuclease II
YPL026C	SKS1______	+1.03	322972	332482	glucose transport (putative)	protein kinase
YPR121W	THI22_____	+1.05	193042	203622	thaimine metabolism	unknown
YBR097W	VPS15_____	+1.05	81951	85680	vacuolar protein targeting	ser/thr protein kinase
YCR034W	FEN1______	+1.01	811391	819455	cell wall biogenesis	beta-1,3-glucan synthase subunit
YDL216C	__________	+1.34	156375	209468	unknown	unknown
YDR335W	MSN5______	+1.26	214672	271024	signaling	pheromone pathway
YER038C	__________	+1.41	168007	236244	unknown	unknown
YGL026C	TRP5______	+1.08	643770	692309	tryptophan biosynthesis	tryptophan synthase
YGR137W	__________	+1.56	1010481	1579684	unknown	unknown; similar to tomato extensin PIR:S14983
YHR150W	__________	+1.17	146499	171030	unknown	unknown
YJL026W	RNR2______	+1.03	1534457	1585305	DNA replication	ribonucleotide reductase
YKL025C	PAN3______	+1.15	284580	327748	mRNA processing	Pab1p-dependent poly(A) ribonuclease subunit
YLL026W	HSP104____	+1.80	694063	1251910	heat shock response /thermotolerance	heat shock protein
YLR331C	__________	+1.33	191424	254640	unknown	unknown
YMR068W	__________	+1.06	183619	195145	unknown	unknown; similar to mouse I kappa B gamma and p70
YNL118C	DCP2______	+1.08	332399	359348	respiration (putative)	unknown; suppresses pet mutant
YOL026C	__________	+1.03	770288	795178	unknown	unknown
YOR236W	DFR1______	-1.16	607930	523894	folate biosynthesis	dihydrofolate reductase
YPL215W	CBP3______	-1.02	444157	433954	respiration	cytochrome-c reductase assembly
YER187W	__________	-1.06	130059	122918	unknown	unknown; similar to killer toxin Khs1p
YBL036C	__________	+1.18	774818	910622	unknown	unknown; similar to Pseudomonas aeroginosa twitching motility protein
YBR299W	MAL32_____	+1.16	156494	181406	maltose metabolism	alpha-glucosidase
YDL038C	__________	-1.16	208366	179801	unknown	unknown
YDR168W	CDC37_____	+1.03	806444	829013	cell cycle	chaperone
YDR537C	__________	-1.15	202727	177011	unknown	unknown
YFL031W	HAC1______	-1.11	131571	118981	unfolded protein response	transcription factor
YGL229C	SAP4______	+1.08	2017578	2171325	cell cycle	Sit4p-associated protein
YHL033C	RPL8A_____	-1.30	11370408	8757921	protein synthesis	ribosomal protein L8A
YIL128W	MET18_____	+1.03	224432	231366	transcription and DNA repair	regulator of TFIIH
YJR007W	SUI2______	-1.21	1797843	1488704	protein synthesis	translation initiation factor eIF-2 alpha subunit
YKR002W	PAP1______	+1.06	498668	530689	mRNA polyadenylation	poly(A) polymerase
YLR159W	__________	-1.00	117880	117314	unknown	unknown
YMR263W	__________	+1.04	394304	410143	unknown	unknown
YNL320W	__________	+1.02	468895	476139	unknown	unknown; similar to S. pombe bem1/bud5 suppressor (Bem46+)
YOR060C	__________	-1.05	124605	118917	unknown	unknown
YPL038W	MET31_____	-1.23	382694	312064	sulfur amino acid metbolism	transcription factor
YPR133C	__________	-1.11	923192	830598	unknown	unknown
YBR109C	CMD1______	+1.29	1372952	1771108	signaling	calmodulin
YCR046C	IMG1______	+1.03	433834	448435	protein synthesis	ribosomal protein, mitochondrial
YDL228C	__________	+1.02	91175	92960	unknown	unknown; similar to Achlya klebsiana glutamate
YDR347W	MRP1______	+1.08	532682	574332	protein synthesis	ribosomal protein, mitochondrial small subunit
YER047C	SAP1______	+1.05	135854	142391	mating type switching	AAA family protein
YGL038C	OCH1______	+1.21	400721	483199	protein glycosylation	membrane-bound mannosyltransferase
YGR149W	__________	+1.68	261388	438210	unknown	unknown; similar to hypothetical protein A-288
YHR162W	__________	+1.07	3092588	3300560	unknown	unknown
YJL038C	__________	+1.09	152839	167278	unknown	unknown
YKL036C	__________	+1.03	179051	184475	unknown	unknown
YLL038C	ENT4______	-1.09	137418	125881	endocytosis (putative)	unknown; epsin homolog
YLR343W	__________	-1.04	327667	314152	unknown	unknown; similar to Gas1p
YNL130C	CPT1______	+1.07	859777	921411	phospholipid metabolism	diacylglycerol cholinephosphotransferase

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YOL038W	PRE6______	+1.09	2537084	2755736	protein degradation	20S proteasome subunit (alpha4)
YOR248W	__________	+1.65	4255186	7009222	unknown	unknown
YPL227C	ALG5______	-1.04	1027901	988583	protein glycosylation	UDP-glucose:dolichyl-phosphate glucosyltransferase
YBL048W	__________	+1.07	96171	102924	unknown	unknown
YDL050C	__________	-1.36	708514	520435	unknown	unknown
YDR178W	SDH4______	+1.74	345805	601940	TCA cycle, oxidative phosphorylation	succinate dehydrogenase anchor subunit
YFL041W	FET5______	+1.08	179112	193562	transport	iron transporter, multicopper oxidase
YGL241W	KAP114____	+1.04	233800	242745	nuclear protein targeting	karyopherin
YHL045W	__________	+1.02	110793	112950	unknown	unknown
YIL140W	SRO4______	+1.36	341064	464094	bud site selection, axial	unknown; plasma membrane protein
YJR018W	__________	-1.33	504527	379563	unknown	unknown
YKR014C	YPT52_____	+1.14	1075496	1225798	endocytosis	GTP-binding protein, rab family
YLR171W	__________	+1.16	429100	495795	unknown	unknown
YMR275C	BUL1______	+1.03	275807	285447	protein degradation, ubiquitin-mediated	unknown; binds Rsp5p ubiquitin ligase
YNL332W	THI12_____	+1.07	161716	173334	pyrimidine biosynthesis	unknown
YOR072W	__________	-1.01	108191	107059	unknown	unknown
YPL050C	MNN9______	-1.15	1214269	1054625	protein glycosylation	mannosyltransferase complex subunit
YPR143W	__________	+1.10	1387328	1528981	unknown	unknown
YBR120C	CBP6______	+1.21	201084	243154	protein synthesis, COB	translation activator of COB mRNA
YCR058C	__________	-1.01	95916	95005
YDL240W	LRG1______	+1.01	186149	187840	sporulation	GTPase-activating protein of the rho/rac family
YDR359C	VID21_____	+1.11	700971	778747	vacuolar protein targeting (putative)	unknown
YER058W	PET117____	+1.23	180696	222394	respiration	cytochrome c oxidase assembly factor
YGL050W	__________	+1.18	119170	141151	unknown	unknown
YGR161C	__________	+1.23	280133	345094	unknown	unknown
YHR174W	ENO2______	+1.05	16008005	16738064	glycolysis	enolase II
YJL051W	__________	-1.14	546625	481398	unknown	unknown
YKL048C	ELM1______	-1.31	717078	546723	pseudohyphal growth	protein kinase
YLL050C	COF1______	-1.49	1732344	1164027	cytoskeleton	cofilin
YLR355C	ILV5______	-1.63	11557195	7076114	isoleucine and valine biosynthesis	ketol-acid reductoisomerase
YMR090W	__________	-1.13	304267	268360	unknown	unknown; similar to malate dehydrogenases
YNL142W	MEP2______	-1.02	219068	213788	transport	ammonia permease
YOL050C	__________	-1.18	406825	345847	unknown	unknown
YOR260W	GCD1______	-1.50	1207538	806417	protein synthesis	translation initiation factor eIF2b gamma subunit
YPL239W	YAR1______	-1.37	1547014	1125744	unknown	unknown
YJR161C	COS5______	+1.42	931689	1324104	unknown	unknown; similar to subtelomerically-encoded proteins
YBL060W	__________	+1.22	236835	288969	unknown	unknown
YDL062W	__________	-1.34	162293	120704	unknown	unknown
YDR189W	SLY1______	+1.18	600355	708263	secretion	SNARE docking complex subunit
YFL053W	DAK2______	+1.16	123942	144191	carbohydrate metabolism; stress response	dihydroxyacetone kinase
YGL253W	HXK2______	+1.01	7447957	7499650	glycolysis	hexokinase II
YHR005C	GPA1______	+1.08	1348207	1462119	signaling, pheromone pathway	alpha subunit of G protein coupled to mating factor
YIL152W	__________	-1.05	672312	642427	unknown	unknown
YJR029W	__________	+1.05	16008005	16738064	unknown	unknown; similar to malate dehydrogenase
YKR026C	GCN3______	-1.22	2579579	2122626	protein synthesis	translation initiation factor EIF2B
YLR183C	__________	-1.20	1741206	1455194	unknown	unknown
YML054C	CYB2______	+1.41	206540	291156	lactate utilization	cytochrome b2
YMR287C	MSU1______	+1.00	194848	195490	mitochondrial biogenesis	component of 3'-5' exonuclease complex
YNR005C	__________	-1.25	166204	132704	unknown	unknown
YOR084W	__________	-1.03	420585	406975	unknown	unknown
YPL060W	__________	+1.09	249868	273182	unknown	unknown; similar to Mrs2p
YPR155C	NCA2______	+1.13	268909	302646	ATP synthesis	regulates Atp6p and Atp8p synthesis
YBR132C	AGP2______	+1.19	140039	167005	transport	general amino acid permease
YCR069W	SCC3______	+1.03	371080	380949	protein folding	peptidyl-prolyl cis-trans isomerase
YDR004W	RAD57_____	+1.15	244887	280887	DNA repair and recombination	RecA homolog
YDR369C	XRS2______	+1.12	208805	234866	DNA repair and recombinations	required for ds break repair
YGL062W	PYC1______	-1.14	606644	531542	TCA cycle	pyruvate carboxylase 1
YGR169C	__________	-1.20	300093	249835	unknown	unknown
YHR186C	__________	-1.16	248500	214195	unknown	unknown; similar to Cdc39p, has WD (WD-40) domain
YJL063C	MRPL8_____	-1.02	606116	592627	protein synthesis	ribosomal protein, mitochondrial L8
YKL060C	FBA1______	+1.05	15888037	16738064	glycolysis	aldolase
YLL062C	MHT1______	+1.01	689631	694875	sulfur amino acid metabolism	S-methylmethionine:homocysteine S-methyltransferase
YLR367W	RPS22B____	-1.04	8580733	8289265	protein synthesis	ribosomal protein S22B
YMR102C	__________	-1.09	172163	157494	unknown	unknown
YNL154C	YCK2______	-1.01	1356679	1347376	unknown	protein kinase
YOL060C	AMI3______	+1.05	212177	223612	mitochondrial morphology (putative)	unknown
YOR272W	YTM1______	-1.75	777029	443347	cytoskeleton (putative)	microtubule-associated protein
YPL250C	ICY2______	-1.03	184323	178701	cytoskeleton (putative)	unknown
YMR317W	__________	-1.03	100251	97552	unknown	unknown
YBL072C	RPS8A_____	+1.05	15846618	16590931	protein synthesis	ribosomal protein S8
YDL074C	__________	+1.06	432036	457139	unknown	unknown
YDR201W	SPC19_____	+1.09	437090	475624	cytoskeleton	spindle pole body component
YFL065C	__________	+1.21	271122	327935	unknown	unknown; similar to other subtelomerically-encoded proteins
YGR002C	__________	+1.04	196033	203888	unknown	unknown; similar to Drosophila melanogaster transcription
YHR016C	YSC84_____	+1.08	308633	333089	unknown	unknown; similar to hypothetical protein YFR024c-a
YIL163C	__________	-1.17	143884	122639	unknown	unknown
YJR041C	__________	-1.22	124095	101390	unknown	unknown; similar to Podospora anserina NADH dehydrogenase
YKR038C	__________	-1.11	615153	552163	unknown	unknown; similar to Qri7p and Pasteurella haemolytica
YLR195C	NMT1______	-1.18	479651	404982	protein processing	N-myristoyltransferase
YML065W	ORC1______	-1.16	374221	323696	DNA replication	origin recognition complex 104 kD subunit
YMR297W	PRC1______	-1.25	1657858	1328410	sporulation	carboxypeptidase Y
YNR017W	MAS6______	-1.45	1333766	922548	mitochondrial protein targeting	inner membrane translocase component
YOR096W	RPS7A_____	-1.03	15089594	14715518	protein synthesis	ribosomal protein S7A
YPL072W	UBP16_____	-1.03	459270	447367	protein degradation, ubiquitin-mediated	putative deubiquitinating enzyme
YPR163C	TIF3______	-1.29	878439	678384	protein synthesis	translation initiation factor eIF4B
YBR144C	__________	+1.09	93202	101859	unknown	unknown
YCR082W	__________	+1.22	406848	496414	unknown	unknown
YDR016C	DAD1______	+1.33	448689	597250	unknown	unknown; localizes to spindles and spindle pole bodies
YDR381W	YRA1______	+1.04	1662826	1724587	mRNA processing	RNA annealing protein
YER078C	__________	+1.03	222425	228954	unknown	unknown; similar to E. coli X-Pro aminopeptidase II
YGL074C	__________	+1.03	95567	98614	unknown	unknown
YGR181W	TIM13_____	-1.08	763793	705524	mitochondrial protein targeting	inner membrane translocase subunit
YHR198C	__________	+1.02	284286	289137	unknown	unknown; similar to Yhr199p
YJL075C	__________	-1.37	743286	543923	unknown	unknown
YKL072W	STB6______	-1.16	225345	193583	unknown	binds Sin3p
YLR007W	__________	-1.03	596539	579566	unknown	unknown
YLR379W	__________	-1.76	350416	198952	unknown	unknown
YMR114C	__________	+1.15	257851	297174	unknown	unknown
YNL166C	BNI5______	+1.04	725093	755039	unknown	unknown; localizes to mother-bud neck
YOL072W	__________	+1.05	326734	342661	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YOR284W	__________	-1.02	190914	187835	unknown	unknown
YPL260W	__________	+1.35	625257	846659	unknown	unknown
YBL084C	CDC27_____	-1.01	87354	86656	cell cycle	anaphase-promoting complex subunit
YDL086W	__________	+1.13	696231	783787	unknown	unknown
YFR009W	GCN20_____	+1.00	91371	91642	protein synthesis	activator of Gcn2p kinase; ABC superfamily
YGR014W	MSB2______	-1.20	956893	798111	bud emergence	unknown
YHR027C	RPN1______	-1.17	581791	498891	protein degradation	26S proteasome regulatory subunit
YIL174W	__________	-1.05	141875	134787	unknown	unknown; similar to Yir040p
YJR053W	BFA1______	-1.22	135983	111546	unknown	unknown
YKR050W	TRK2______	-1.10	126244	114801	transport	potassium permease
YLR207W	HRD3______	+1.03	291441	300612	protein degradation	HMG-CoA reductase degradation
YML077W	BET5______	-1.05	510561	484824	secretion (putative)	unknown; suppresses bet3 mutation
YMR307W	GAS1______	-1.23	8659022	7048758	unknown	cell surface glycoprotein
YNR029C	__________	-1.01	675258	670188	unknown	unknown; similar to Rhodococcus sp. nitrile hydratase
YOR108W	__________	-1.68	1438476	856612	unknown	unknown; similar to Leu4p
YPL084W	BRO1______	-1.11	87713	78889	unknown	unknown
YPR175W	DPB2______	-1.23	112164	91519	DNA replication	polymerase epsilon 80 kDa subunit
YBR156C	SLI15_____	+1.15	286589	328936	mitosis, chromosome segregation	unknown
YCR093W	CDC39_____	-1.05	624921	593628	transcription	general negative regulator
YDR028C	REG1______	+1.14	346265	393444	glucose repression	protein phosphatase regulator
YDR393W	SHE9______	-1.02	345767	338207	unknown	unknown
YER089C	PTC2______	-1.17	976863	835433	unknown	protein phosphatase
YGL086W	MAD1______	+1.04	734965	766298	cell cycle	spindle checkpoint complex subunit
YGR193C	PDX1______	-1.14	1062839	929925	glycolysis	pyruvate dehydrogenase
YHR210C	__________	-1.01	202713	201580	unknown	unknown; similar to Gal10p, has strong similarity to
YJL087C	TRL1______	-1.27	427226	337119	tRNA splicing	tRNA ligase
YKL084W	__________	-1.17	327578	278944	unknown	unknown
YLR019W	PSR2______	+1.02	134484	136896	salt tolerance (putative)	phosphatase
YLR390W	SSR1______	+1.54	2957890	4552913	unknown	secretory stress response
YMR125W	STO1______	-1.15	284463	247090	glycolysis	large subunit of the nuclear CAP-binding protein complex
YNL178W	RPS3______	+1.09	14690274	15940321	protein synthesis	ribosomal protein S3
YOL084W	__________	-1.43	129235	90338	unknown	major facilitator superfamily
YOR296W	__________	-1.12	126852	112799	unknown	unknown; may be involved in bud site selection (YPD)
YPL272C	__________	-1.11	93101	83521	unknown	unknown
YAL003W	EFB1______	+1.09	8773007	9564345	protein synthesis	translation elongation factor EF1-beta
YBR168W	__________	+1.23	182343	223640	unknown	unknown
YCR105W	__________	+1.11	142993	159350	unknown	unknown; similar to bovine alcohol dehydrogenase
YDR039C	ENA2______	+1.24	171445	212727	transport	plasma membrane ATPase
YDR406W	PDR15_____	+1.33	283994	378143	drug resistance	putative transporter
YER101C	AST2______	+1.17	201749	236825	plasma membrane protein targeting	targets plasma membrane ATPase
YGL099W	__________	-1.13	235027	208070	unknown	unknown; similar to human possible GTP-binding protein HSR1
YGR206W	__________	+1.11	401485	447102	unknown	unknown
YIL003W	__________	-1.18	330723	280724	unknown	unknown; similar to E. coli MRP protein
YJL100W	__________	+1.50	151895	228207	unknown	unknown
YKL097C	__________	+1.12	96770	108379	unknown	unknown
YLR032W	RAD5______	+1.02	76147	77677	DNA repair	DNA helicase
YLR404W	__________	-1.04	90064	86724	unknown	unknown
YMR137C	PSO2______	+1.05	149456	157326	DNA repair	required for interstrand crosslink repair
YNL191W	__________	-1.06	92585	87218	unknown	unknown
YOL097C	WRS1______	-1.30	2002491	1539965	protein synthesis	tRNA ligase, tryptophan
YOR307C	SLY41_____	-1.04	98876	95143	secretion	unknown; suppresses ypt1 null
YPR002W	PDH1______	+1.11	272587	302626	proionate metabolism (putative)	unknown; prpD homolog
YBL097W	BRN1______	+1.46	110517	161853	chromosome maintenance	unknown; homolog of human BRRN1
YCL002C	__________	+1.11	185863	205877	unknown	unknown
YDL099W	__________	+1.36	558640	758136	unknown	unknown
YDR222W	__________	+1.25	253783	317030	unknown	unknown
YEL003W	GIM4______	+1.36	461947	630242	protein folding	chaperone; tubulin folding
YFR022W	__________	+1.14	124610	141966	unknown	unknown
YGR027C	RPS25A____	+1.06	14959924	15786121	protein synthesis	ribosomal protein S25A
YHR039C	__________	+1.16	395576	460405	unknown	unknown; similar to aldehyde dehydrogenases
YIR010W	__________	+1.17	414404	484355	unknown	unknown
YJR066W	TOR1______	+1.18	1201090	1417993	signaling, cell cycle and meiosis	phosphatidylinositol 3-kinase
YKR063C	LAS1______	+1.13	364564	411525	morphogenesis, cytoskeletal assembly, bud formation	(putative) gene expression
YLR220W	CCC1______	+1.03	573644	590280	ion homeostasis, Ca2+ and Mn2+	transmembrane transporter, putative
YML090W	__________	-1.00	107010	106752	unknown	unknown
YNL003C	PET8______	+1.53	362878	556563	mitochondrial protein targeting	mitochondrial carrier family
YNR042W	__________	-1.15	143490	124317	unknown	unknown
YOR121C	__________	+1.38	267628	368250	unknown	unknown
YPL097W	MSY1______	+1.01	280976	283432	protein synthesis	tRNA synthetase, mitochondrial, tyrosyl
YPR188C	MLC2______	+1.19	661269	785639	cytoskeleton	myosin light chain
YAL016W	TPD3______	+1.19	522040	621146	tRNA biosynthesis, cytokinesis, ceramide-mediated signaling	protein phosphatase (PP2A regulatory subunit)
YBR180W	DTR1______	+1.23	134449	165710	sporulation	dityrosine transporter
YCRX10W	__________	+1.33	377403	501934
YDR051C	__________	+1.33	332083	441343	unknown	unknown
YDR418W	RPL12B____	+1.09	14489903	15768291	protein synthesis	ribosomal protein L12B
YER113C	__________	+1.12	372439	417894	unknown	unknown; similar to Emp70p
YGL111W	__________	-1.30	733665	563254	unknown	unknown
YGR218W	CRM1______	+1.05	415244	435559	nuclear protein targeting	nuclear export factor
YIL014W	MNT3______	-1.09	313836	287714	protein glycosylation	mannosyltransferase
YJL112W	MDV1______	+1.14	234896	268135	unknown	unknown
YKL108W	SLD2______	+1.04	230794	240575	DNA replication	unknown; interacts with Dpb11p
YLR042C	__________	+1.28	240604	308654	unknown	unknown
YLR414C	__________	+2.33	950864	2218389	unknown	unknown
YMR149W	SWP1______	-1.10	1474060	1341440	protein glycosylation	oligosaccharyltransferase complex subunit
YNL203C	__________	+1.04	143231	149095	unknown	unknown; similar to Bacillus subtilis
YOL107W	__________	+1.11	214185	238268	unknown	unknown; similar to Rnh70p and Pan2p
YOR319W	HSH49_____	-1.04	291317	279299	mRNA splicing	U2 snRNP protein; human SAP145 homolog
YPR014C	__________	+1.02	151853	155366	unknown	unknown
YBL107C	__________	+1.10	78598	86291	unknown	unknown
YCL014W	BUD3______	+1.15	104601	120125	cell polarity	bud site selection
YDL111C	RRP42_____	+1.21	644116	778546	rRNA processing	exoribonuclease
YDR234W	LYS4______	+1.12	147371	165296	lysine biosynthesis	homoaconitase
YEL015W	__________	+1.04	362514	377501	unknown	unknown
YGR037C	ACB1______	-1.01	1767161	1752007	fatty acid metabolism	acyl-CoA ester transporter
YHR050W	SMF2______	+1.11	657647	727528	transport	(putative) manganese transporter
YJR078W	__________	+1.30	105947	137479	unknown	unknown; similar to indoleamine 2,3-dioxygenase
YKR075C	__________	+1.08	220169	237337	unknown	unknown; similar to Reg1p
YLR230W	__________	-1.19	507888	426661	unknown	unknown
YML100W	TSL1______	+1.57	685077	1073932	trehalose metabolism	trehalose-6-phosphate synthase/phosphatase complex regulatory subunit
YNL015W	PBI2______	+1.56	447113	697411	unknown	protease inhibitor

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YNR054C	__________	-1.44	926859	645220	unknown	unknown
YOR133W	EFT1______	-1.34	12695167	9502929	protein synthesis	translation elongation factor eEF2
YPL109C	__________	-1.00	275631	275506	unknown	unknown
YPR200C	ARR2______	-1.06	208854	196265	arsenic resistance	unknown
YAL028A	__________	+1.17	104766	122854
YBR192W	RIM2______	+1.20	126169	151257	transport	mitochondrial carrier family
YDR063W	__________	+1.27	542596	687101	unknown	unknown
YDR430C	__________	+1.09	200891	218043	unknown	unknown; similar to class I family of aminoacyl-tRNA
YER124C	__________	+1.18	356564	419671	unknown	unknown
YGL123W	RPS2______	-1.32	7951862	6005043	protein synthesis	ribosomal protein S2
YGR230W	BNS1______	+1.19	236836	282478	unknown	unknown; similar to Spo12p; bypasses spo12/spo12 deletion
YIL026C	IRR1______	+1.11	174359	192756	unknown	colony morphology
YJL124C	LSM1______	-1.08	859348	796135	mRNA splicing (putative)	similar to snRNA-associated protein
YKL120W	OAC1______	-1.48	1332572	898914	transport	oxaloacetate carrier
YLR054C	__________	+1.17	128156	149698	unknown	unknown
YMR159C	APG16_____	-1.06	153120	144860	autophagy	unknown; interacts with Apg5p and Apg12p; similar to human Sin3 complex component SAP1
YNL215W	__________	+1.04	506647	526913	unknown	unknown
YOL119C	__________	-1.37	337760	245644	unknown	unknown; similar to mammalian monocarboxylate
YOR331C	__________	-1.28	3774453	2960268	unknown	unknown
YPR026W	ATH1______	+1.00	172989	173230	trehalose metabolism	vacuolar acid trehalase
YBR006W	UGA5______	+1.39	169050	234742	GABA metabolism	succinate semialdehyde dehydrogenase
YCL027W	FUS1______	-1.02	226702	222555	mating; cell fusion	SH3 domain protein
YDL123W	__________	+1.21	250775	302710	unknown	unknown
YEL026W	SNU13_____	+1.02	4503035	4610555	mRNA splicing (putative)	U4/U6.U5 snRNP protein
YFR043C	__________	+1.24	294279	364000	unknown	unknown
YGR044C	RME1______	+1.29	499859	645553	meiosis	transcription factor
YHR061C	GIC1______	+1.11	198000	219893	bud emergence	binds Cdc42p
YIR031C	DAL7______	+1.14	172897	197725	allantoin utilization	malate synthase
YJR091C	JSN1______	+1.01	155126	156156	mitosis (putative)	unknown; suppresses tub2-150
YKR087C	__________	+1.33	342427	455096	unknown	unknown; similar to neutral zinc metallopeptidases
YLR242C	ARV1______	+1.22	227998	277322	unknown	unknown; similar to C.elegans R05H5.5 protein and Nup120p
YML111W	BUL2______	+1.04	138672	144288	protein degradation, ubiquitin-mediated (putative)	unknown; similar to Bul1p
YNL027W	CRZ1______	+1.41	458724	645480	(calcineurin) signaling	calcineurin-responsive transcription factor
YNR066C	__________	+1.04	133786	138825	unknown	unknown; similar to Pep1p
YOR143C	THI80_____	+1.00	338012	338024	thiamine metabolism	thiamine pyrophosphokinase
YPL121C	MEI5______	-1.02	124823	122081	meiosis, synapsis and recombination	unknown
YAL037W	__________	+1.02	108402	110965	unknown	unknown
YBR204C	__________	+1.23	135953	167759	unknown	unknown; similar to peroxisomal serine-active lipase
YDR075W	PPH3______	+1.08	259203	280317	cell cycle	protein phosphatase 2A
YDR442W	__________	+1.02	146676	149348	unknown	unknown
YER136W	GDI1______	+1.26	947904	1195175	secretion	regulatory; GDP dissociation inhibitor
YGL135W	RPL1B_____	+1.07	14937398	15972571	protein synthesis	ribosomal protein L1B
YGR242W	__________	-1.14	212926	187589	unknown	unknown
YIL038C	NOT3______	-1.13	426620	376487	transcription	general repressor
YJL136C	RPS21B____	+1.03	10299408	10599268	protein synthesis	ribosomal protein S21B
YKL132C	RMA1______	+1.04	302870	315343	unknown; mating (putative)	unknown; similar to folylpolyglutamate synthase
YLR066W	SPC3______	+1.08	800829	864735	secretion	signal peptidase subunit
YLR436C	ECM30_____	-1.18	1509889	1281822	cell wall biogenesis	unknown
YMR171C	__________	-1.05	604396	577262	unknown	unknown
YNL227C	__________	-1.00	227286	226803	unknown	unknown; similar to E. coli DnaJ and other DnaJ-like
YOL131W	__________	-1.07	115983	108766	unknown	unknown
YOR343C	__________	-1.04	122080	117526	unknown	unknown
YPR038W	__________	-1.34	404922	302844	unknown	unknown
YBR016W	__________	-1.00	428884	427924	unknown	unknown
YCL039W	__________	-1.05	98322	93891	unknown	unknown
YDL133W	__________	+1.20	340233	406714	unknown	unknown
YDR258C	HSP78_____	+1.58	395558	624591	protein folding	mitochondrial
YEL038W	UTR4______	-1.08	487379	452356	unknown	unknown
YFR055W	__________	-1.92	786743	409706	unknown	unknown; similar to E. coli cystathionine beta
YGR056W	RSC1______	-1.11	161795	145206	chromatin structure	chromatin remodeling complex subunit
YHR071W	PCL5______	+1.43	510571	728699	cell cycle	cyclin (Pho85p)
YIR043C	__________	+1.40	1203123	1685219	unknown	unknown
YJR102C	__________	-1.06	154297	145887	unknown	unknown
YKR099W	BAS1______	+1.05	165294	172751	histidine, adenine biosynthesis	transcription factor
YLR254C	__________	+1.11	315544	349259	unknown	unknown
YML122C	__________	-1.02	183585	179803	unknown	unknown
YNL037C	IDH1______	+1.10	1253419	1382214	TCA cycle	isocitrate dehydrogenase
YOR155C	__________	+1.12	404144	451880	unknown	unknown
YPL133C	__________	-1.05	170987	163515	unknown	unknown; similar to transcription factors, has Zn[2]-Cys[6]
YAL048C	__________	-1.15	147274	128032	secretion (putative)	unknown; similar to Ras1p, Ras2p, and other GTP-binding proteins of the RAS superfamily
YBR216C	__________	+1.04	163635	170414	unknown	unknown
YDR087C	RRP1______	-1.31	802588	614757	rRNA processing	unknown
YDR454C	GUK1______	-1.06	2825627	2654214	guanine nucleotide metabolism	guanylate kinase
YGL147C	RPL9A_____	+1.04	15960965	16677815	protein synthesis	ribosomal protein L9A
YGR254W	ENO1______	+1.04	15947348	16594307	glycolysis	enolase I
YIL050W	PCL7______	+1.01	713971	719196	cell cycle	cyclin
YJL148W	RPA34_____	-1.68	1322457	786198	transcription	RNA polymerase I subunit
YKL144C	RPC25_____	-1.14	878728	771866	transcription	RNA polymerase III 25 kD subunit
YLR078C	BOS1______	+1.09	767850	836769	secretion	ER-to-Golgi v-SNARE
YLR448W	RPL6B_____	+1.01	15349108	15578065	protein synthesis	ribosomal protein L6b
YMR181C	__________	+1.18	840649	994783	unknown	unknown
YNL239W	LAP3______	-1.34	825636	616910	protein degradation	aminopeptidase of cysteine protease family
YOL143C	RIB4______	-1.00	2555801	2548295	riboflavin biosynthesis	6,7-dimethyl-8-ribityllumazine synthase
YOR353C	__________	+1.06	368381	390574	unknown	unknown; similar to adenylate cyclases
YPR050C	__________	+1.00	594500	594628	unknown	unknown
YBR028C	__________	-1.03	415513	402813	unknown	unknown; similar to Ypk2p/Ykr2p and Ypk1p
YCL051W	LRE1______	+1.13	196615	222789	laminarase resistance	unknown
YDL145C	COP1______	-1.24	1727816	1393551	secretion	vesicle coat component
YDR266C	__________	-1.14	556208	488160	unknown	unknown
YEL050C	RML2______	+1.04	395835	412295	protein synthesis	ribosomal protein, mitochondrial L2
YGR068C	__________	-1.55	228401	147457	unknown	unknown; similar to Rod1p
YHR082C	KSP1______	+1.13	190090	214675	unknown	protein kinase
YJR114W	__________	-1.31	254872	194874	unknown	unknown
YMR001C	CDC5______	+1.00	434388	435465	cell cycle	G2/M protein kinase
YNL049C	SFB2______	-1.09	185577	169998	unknown	unknown; similar to Sec24p; binds Sed3p and Sec23p
YOR167C	RPS28A____	+1.15	11641157	13435490	protein synthesis	ribosomal protein S28A
YPL145C	KES1______	-1.08	1337437	1240850	sterol metabolism	unknown
YAL062W	GDH3______	-1.01	234016	231905	glutamate biosynthesis	NADP-glutamate dehydrogenase
YBR228W	__________	+1.13	215177	242521	unknown	unknown
YDR466W	__________	+1.09	118358	128641	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YER156C	__________	-1.25	1106612	885157	unknown	unknown
YGL159W	__________	+1.15	455818	522951	unknown	unknown
YGR266W	__________	-1.09	385518	353969	unknown	unknown
YIL062C	ARC15_____	+1.51	1185134	1791681	cytoskeleton	cortical actin patch integrity
YJL160C	__________	+1.04	149020	154748	unknown	unknown; similar to members of the Pir1p/Hsp150p/Pir3p
YKL156W	RPS27A____	-1.17	6229566	5337708	protein synthesis	ribosomal protein S27A
YLR090W	XDJ1______	-1.11	478789	432756	unknown	unknown; similar to E.coli dnaJ
YLR460C	__________	-1.20	184353	153194	unknown	unknown; similar to Ycr102p
YMR193W	MRPL24____	+1.03	422446	435680	protein synthesis	ribosomal protein, mitochondrial L24
YNL251C	NRD1______	-1.11	182627	164776	transcription	elongation; also mRNA abundance
YOL155C	__________	+1.31	232430	304647	unknown	unknown; similar to S. cerevisiae glucan 1,4-alpha-glucosidase
YOR365C	__________	-1.08	212095	196805	unknown	unknown
YPR062W	FCY1______	-1.23	2551141	2073367	pyrimidine metabolism	cytosine deaminase
YBR040W	FIG1______	+1.04	109137	113524	mating	extracellular integral membrane protein
YCL063W	__________	-1.07	147407	138360	unknown	unknown; similar to plant aminocyclopropane-1-carboxylate
YDL157C	__________	-1.07	479404	446654	unknown	unknown
YDR278C	__________	+1.00	122787	122924	unknown	unknown
YEL061C	CIN8______	+1.03	1595691	1648312	mitosis, spindle maintenance	kinesin related protein
YGR080W	TWF1______	+1.33	529265	702491	cytoskeleton	twifilin; actin monomer sequestering protein
YHR094C	HXT1______	-1.13	3191611	2815087	transport	hexose permease
YJR126C	__________	-1.07	398749	373714	unknown	unknown; similar to transferrin receptor
YLR274W	CDC46_____	+1.04	386866	403943	DNA replication	MCM initiator complex
YMR013C	SEC59_____	+1.06	272539	289989	protein glycosylation	mannosyltransferase (putative)
YNL059C	ARP5______	+1.07	468947	501828	cytoskeleton (putative)	actin-related protein
YOR179C	__________	-1.02	238065	232345	unknown	unknown
YPL157W	__________	-1.06	434822	408506	unknown	unknown
YAR008W	SEN34_____	+1.11	142764	158440	tRNA splicing	splicing endonuclease subunit
YBR240C	THI2______	+1.04	89350	92920	thiamine biosynthesis	transcription factor
YDR109C	__________	+1.09	238241	259503	unknown	unknown; similar to FGGY kinase family (GB:Z48758)
YDR478W	SNM1______	-1.01	193960	192108	rRNA processing	RNase MRP component
YGL171W	ROK1______	-1.56	624599	399488	rRNA processing	RNA helicase
YGR278W	__________	-1.12	271603	242767	unknown	unknown
YJL172W	CPS1______	-1.04	321720	309098	protein degradation	vacuolar carboxypeptidase yscS
YKL168C	KKQ8______	-1.01	222808	220899	unknown	protein kinase
YLR102C	APC9______	+1.10	181693	199934	cell cycle	anaphase-promoting complex subunit
YMR204C	__________	+1.01	186218	187364	unknown	unknown
YNL263C	YIF1______	+1.03	875662	903366	unknown	interacts with Yip1p; similar to NADH dehydrogenases
YOR001W	RRP6______	-1.27	581640	459455	rRNA processing, 5.8S	unknown
YOR377W	ATF1______	-1.53	451519	294159	acetate ester biosynthesis	alcohol acetyltransferase
YPR074C	TKL1______	-1.03	94153	91424	pentose phosphate cycle	transketolase
YBR052C	__________	+1.41	737974	1040046	unknown	unknown; similar to Ycp4p, S. pombe obr1, and E. coli trp
YCLX02C	__________	-1.33	141595	106158
YDL169C	UGX2______	+1.45	103041	149517	unknown	unknown
YDR290W	__________	-1.02	107236	105531	unknown	unknown
YEL073C	__________	+1.25	125908	157668	unknown	unknown
YGR092W	DBF2______	+1.20	360800	433560	cell cycle	late mitosis; protein kinase
YHR106W	TRR2______	-1.13	1177876	1042591	pyrimidine biosynthesis	thioredoxin reductase
YJR138W	IML1______	-1.25	122428	97995	plasmid maintenance (outative)	unknown
YLR286C	CTS1______	+1.04	3445384	3589208	cell wall biogenesis	endochitinase
YMR025W	__________	-1.11	282183	254835	unknown	unknown
YNL071W	LAT1______	-1.06	5956502	5602971	glycolysis	dihydrolipoamide S-acetyltransferase
YOR191W	RIS1______	-1.06	1002161	941729	silencing	SNF2 family DNA-dependent ATPase
YPL169C	MEX67_____	+1.06	778183	827596	mRNA export	poly(A)+RNA binding protein
YAR030C	__________	+1.05	138918	145706	unknown	unknown
YBR252W	DUT1______	-1.01	764936	756265	pyrimidine metabolism	dUTP pyrophosphatase
YDR121W	DPB4______	+1.01	440340	446139	DNA replication	DNA polymerase epsilon subunit
YDR490C	PKH1______	+1.24	253815	315565	unknown	protein kinase (ser/thr)
YER176W	ECM32_____	+1.13	203452	230819	cell wall biogenesis	DNA helicase I
YGL183C	__________	-1.10	170324	155386	unknown	unknown
YGR290W	__________	-1.17	137450	117385	unknown	unknown
YIL082W	__________	-1.06	318238	299044	unknown	unknown
YJL184W	__________	-1.01	669117	659606	unknown	unknown
YKL180W	RPL17A____	+1.04	15946662	16618664	protein synthesis	ribosomal protein L17A
YLR114C	EFR4______	-1.03	1505223	1461239	unknown	unknown; similar to Drosophila bicaudal-D protein; null requires PHO85
YMR216C	SKY1______	-1.13	429735	379045	unknown	protein kinase
YNL275W	__________	-1.05	199599	189838	unknown	unknown; similar to human band 3 anion transport protein
YOR013W	__________	-1.02	190880	187555	unknown	unknown
YOR389W	__________	-1.05	245909	233511	unknown	unknown
YPR086W	SUA7______	-1.10	690120	628855	transcription	TFIIB subunit
YBR064W	__________	-1.05	125249	119086	unknown	unknown
YCR002C	CDC10_____	+1.20	631780	758975	cytokinesis	septin
YDL181W	INH1______	+2.06	386649	794818	ATP synthesis	mitochondrial ATPase inhibitor
YDR302W	GPI11_____	+1.13	337270	382040	protein processing	GPI-phosphoethanolamine transferase subunit
YGR104C	SRB5______	-1.03	306212	297539	transcription	RNA polymerase II mediator subunit
YHR118C	ORC6______	+1.28	111335	142120	DNA replication	origin recognition complex, 50 KD subunit
YJR150C	DAN1______	+1.11	125064	138630	unknown	unknown; induced during anaerobic growth
YLR297W	__________	+1.22	321161	392509	unknown	unknown
YMR036C	MIH1______	-1.03	82711	80581	cell cycle	M-phase phosphatase
YNL083W	__________	-1.11	118301	106674	unknown	unknown; mitochondrial carrier (MCF) family
YOR201C	PET56_____	+1.43	181556	259421	rRNA processing, mitochondrial	ribose methyltransferase
YPL181W	__________	-1.10	89125	81082	unknown	unknown
YBL003C	HTA2______	+1.20	6560365	7857515	chromatin structure	histone H2A
YBR264C	YPT10_____	+1.25	345187	432386	unknown	unknown; similar to rab proteins and other small GTP-binding
YDL003W	MCD1______	+1.22	467199	568294	mitosis, sister chromatid cohesion	unknown
YDR133C	__________	+1.11	14735959	16379030	unknown	unknown
YDR502C	SAM2______	-1.09	2388770	2191591	methionine biosynthesis	regulator; S-adenosylmethionine synthetase
YFL001W	DEG1______	+1.18	133071	156462	tRNA processing	pseudouridine synthase
YGL195W	GCN1______	+1.13	89857	101947	protein synthesis	translation activator of GCN4
YHL002W	__________	+1.30	263578	342398	unknown	unknown
YIL094C	LYS12_____	-1.06	1532085	1443052	lysine biosynthesis	homo-isocitrate dehydrogenase
YJL196C	ELO1______	+1.25	970160	1212011	fatty acid metabolism	fatty acid elongation protein
YKL192C	ACP1______	+1.15	1253888	1438550	fatty acid biosynthesis	mitochondrial acyl carrier protein
YLR126C	__________	+1.07	274604	294866	unknown	unknown; similar to Pseudomonas aeroginosa anthranilate
YML003W	__________	-1.07	121979	114094	unknown	unknown
YMR228W	MTF1______	+1.05	243589	254738	transcription	mitochondrial RNA polymerase specificity factor
YNL285W	__________	+1.35	224554	302898	unknown	unknown
YOR025W	HST3______	+1.07	434536	464349	silencing	unknown
YPL003W	ULA1______	+1.28	368679	470754	protein degradation, Rub1p-mediated	Rub1p activating protein
YPR098C	__________	+1.24	373201	461150	unknown	unknown
YBR076W	ECM8______	+2.01	137995	278015	cell wall biogenesis	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YCR014C	POL4______	+1.40	178275	250132	DNA repair	DNA polymerase IV
YDL193W	__________	+1.03	459550	473378	unknown	unknown
YDR314C	__________	+1.17	100403	117257	unknown	unknown
YER016W	BIM1______	+1.27	578070	736983	cytoskeleton	microtubule binding protein
YGL003C	CDH1______	+1.30	123699	160504	cell cycle	cyclin degradation
YGR114C	__________	-1.58	348377	221036	unknown	unknown
YHR130C	__________	+1.09	88606	96663	unknown	unknown
YJL003W	__________	+1.25	220540	276163	unknown	unknown
YKL003C	MRP17_____	+1.20	331072	398354	protein synthesis	ribosomal protein, mitochondrial small subunit
YLL003W	SFI1______	+1.19	214889	256738	unknown	unknown
YLR309C	IMH1______	+1.02	235676	240596	secretion (putative)	unknown; suppresses ypt6 ts mutation
YMR047C	NUP116____	-1.21	1201654	995380	nuclear protein targeting	nuclear pore protein
YNL095C	__________	-1.10	283331	258421	unknown	unknown; similar to Ecm3p
YOL003C	__________	-1.04	476094	458792	unknown	unknown
YOR213C	SAS5______	+1.13	538933	610143	silencing	unknown
YPL192C	__________	-1.07	299702	280551	unknown	unknown
YAR053W	__________	-1.07	159538	148799	unknown	unknown
YBL013W	FMT1______	+1.12	117762	131628	tRNA processing	met-tRNA formyltransferase
YBR276C	PPS1______	+1.22	377215	459616	unknown	protein phosphatase
YDL015C	__________	-1.02	1298663	1273668	unknown	unknown; similar to rat synaptic glycoprotein SC2
YDR145W	TAF61_____	+1.81	1244334	2254802	transcription	TFIID 61 kDsubunit
YDR514C	__________	+1.25	583736	728487	unknown	unknown
YFL012W	__________	+1.15	101039	115989	unknown	unknown
YGL207W	SPT16_____	-1.16	563691	484752	chromatin structure	non-histone protein
YHL011C	PRS3______	+1.08	222532	239612	purine biosynthesis	ribose-phosphate pyrophosphokinase 3
YIL105C	__________	+1.04	9462789	9810635	unknown	unknown; similar to Ask10p and Ynl047p
YJL208C	NUC1______	-1.05	399176	379398	mitochondrial recombination	endonuclease
YKL204W	EAP1______	+1.08	106398	115129	translation	unknown; associates with translation initiation factor eIF4E
YLR138W	NHA1______	+1.18	450593	533663	transport (putative)	Na+/H+ antiporter
YML012W	ERV25_____	+1.17	840415	984275	secretion	vesicle coat component
YMR240C	CUS1______	+1.01	579573	584733	mRNA splicing	U2 snRNP protein
YNL297C	MON2______	+1.12	185857	208384	secretion (putative)	unknown; brefeldin A sensitive; monensin sensitive
YOR037W	CYC2______	+1.07	281252	300670	mitochondrial protein targeting	cytochrome c import factor
YPL015C	HST2______	-1.10	556963	506734	unknown	similar to Sir2p
YPR110C	RPC40_____	-1.83	2238828	1221767	transcription	RNA polymerase III 40 kD subunit
YBR087W	RFC5______	+1.22	443038	541946	DNA replication	DNA polymerase processivity factor
YCR024C	PMP1______	+1.35	2252856	3046833	H+ homeostasis	regulates plasma membrane H+-ATPase
YDL205C	HEM3______	-1.02	324200	319131	heme biosynthesis	phorphobilinogen deaminase (uroporphyrinogen synthase)
YDR324C	__________	-1.06	311779	293361	unknown	unknown; similar to G-protein beta subunits
YER027C	GAL83_____	+1.35	505835	682001	glucose repression	component of Snf1 complex
YGL015C	__________	+1.11	128006	142545	unknown	unknown
YGR126W	__________	+1.04	90612	93905	unknown	unknown
YHR140W	__________	+1.03	433164	444079	unknown	unknown
YJL015C	__________	+1.44	216031	311031	unknown	unknown
YKL014C	__________	-1.13	448645	398660	unknown	unknown
YLL015W	BPT1______	+1.11	316412	350960	transport	bile pigment transporter
YLR320W	__________	+1.06	96079	102115	unknown	unknown
YMR057C	__________	+1.04	114951	119422	unknown	unknown
YNL107W	YAF9______	+1.06	312012	330776	unknown	unknown; similar to human AF-9 protein
YOL015W	__________	-1.01	185823	184367	unknown	unknown
YOR225W	__________	-1.19	736067	618075	unknown	unknown
YPL204W	HRR25_____	-1.01	1198623	1189640	DNA repair	casein kinase I isoform
YBL025W	RRN10_____	+1.12	180074	201590	transcription	component of upstream activation factor complex (UAF)
YBR288C	APM3______	+1.14	334996	382810	vacuolar protein targeting	AP-3 complex subunit
YDL027C	__________	+1.60	242918	388780	unknown	unknown
YDR157W	__________	+1.10	345941	381769	unknown	unknown
YDR526C	__________	+1.00	303353	304249	unknown	unknown
YFL021W	GAT1______	+1.30	255194	331789	nitrogen catabolism	transcription factor
YGL219C	__________	+1.21	292749	354994	unknown	unknown; similar to Mycoplasma genitalium threoninyl-tRNA
YHL023C	__________	+1.17	248946	290837	unknown	unknown
YIL117C	__________	+3.40	486130	1653542	unknown	unknown
YJL220W	__________	+1.09	92558	100492	unknown	unknown; similar to alpha-D-glucosidase (maltase)
YKL216W	URA1______	+1.11	3738689	4152171	pyrimidine biosynthesis	dihydroorotate dehydrogenase
YLR150W	STM1______	-1.03	11780091	11446532	unknown	unknown; suppressor of tom1 and pop2 mutations
YMR252C	__________	+1.17	293054	342412	unknown	unknown
YNL309W	STB1______	-1.04	177701	171078	unknown	binds Sin3p
YOR049C	__________	+1.32	220766	290792	unknown	unknown
YPL027W	__________	+1.01	179118	181716	unknown	unknown
YPR122W	AXL1______	+1.03	123388	127656	bud site selection, axial	unknown; insulin-degrading enzyme homolog
YBR098W	MMS4______	+1.10	86400	94945	methylmethanesulfonate resistance	transcription activator (putative)
YCR035C	RRP43_____	+1.20	189165	227754	rRNA processing	exoribonuclease
YDL217C	TIM22_____	-1.11	345325	309983	mitochondrial protein targeting	inner membrane carrier protein
YDR336W	__________	+1.16	203138	235860	unknown	unknown
YGL027C	CWH41_____	+1.10	415310	458775	cell wall biogenesis	beta-1,6-glucan assembly protein
YGR138C	__________	+1.60	662642	1060559	unknown	major facilitator superfamily
YHR151C	__________	+1.12	160001	179083	unknown	unknown
YJL027C	__________	+1.12	89985	100580	unknown	unknown
YKL026C	GPX1______	+1.01	80281	81001	glutathione metabolism (putative)	glutathione peroxidase (putative)
YLL027W	ISA1______	+1.31	474524	622727	unknown	unknown; Iron Sulfur Assembly -- IscA/NifA homolog
YLR332W	MID2______	+1.79	445927	800323	mating (putative)	unknown; mutant is sensitive to matin pheromone
YMR069W	__________	+1.12	133972	149478	unknown	unknown
YNL119W	__________	-1.10	1090157	988870	unknown	unknown
YOL027C	__________	-1.21	667999	553458	unknown	unknown
YOR237W	HES1______	+1.01	136302	137997	sterol metabolism	unknown
YPL216W	__________	-1.08	328554	303475	unknown	unknown
YER188W	__________	+1.05	158193	166048	unknown	unknown
YBL037W	APL3______	+1.07	99902	106605	secretion	clathrin associated
YBR300C	__________	-1.02	117533	114820	unknown	unknown
YDL039C	__________	-1.02	188527	185361	unknown	unknown
YDR169C	STB3______	+1.28	242282	309335	unknown	binds Sin3p
YDR538W	PAD1______	-1.08	240609	222981	phenylacrylic acid resistance	phenylacrylic acid decarboxylase
YFL032W	__________	-1.02	163505	160156	unknown	unknown
YGL230C	__________	+1.33	122837	163399	unknown	unknown
YHL034C	SBP1______	+1.15	3583206	4132890	RNA processing	single stranded nucleic acid binding protein
YIL129C	TAO3______	+1.20	888688	1064130	transcription (putative)	unknown; transcripiotnal activator of OCH1
YJR008W	__________	+1.51	175070	263781	unknown	unknown
YKR003W	__________	+1.39	515456	716647	unknown	unknown; similar to human oxysterol-binding protein
YLR160C	ASP3-4____	+1.32	2110959	2792961	asparagine utilization	L-asparaginase II
YML034W	SRC1______	-1.04	205468	197055	unknown	unknown; induced at G2/M
YMR264W	CUE1______	-1.01	1136135	1126393	protein degradation, ubiquitin-mediated	recruits enzyme Ubc7p to membrane

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YNL321W	__________	-1.07	163284	152804	unknown	unknown; calcium permease family
YOR061W	CKA2______	-1.08	115754	106873	cell cycle	casein kinase II
YPL039W	__________	-1.08	214183	198954	unknown	unknown
YPR134W	MSS18_____	+1.10	311985	343729	mRNA splicing, COX1 mRNA	unknown
YCR047C	__________	-1.19	620887	523276	unknown	unknown; similar to rat methylglycine transferase
YDL229W	SSB1______	-1.11	106447	95529	translation	cytosolic HSP70
YDR348C	__________	+1.00	268402	269076	unknown	unknown
YER048C	CAJ1______	+1.05	1021948	1073550	unknown	unknown; similar to E. coli DnaJ
YGL039W	__________	-1.05	564910	539655	unknown	unknown
YGR150C	__________	-1.09	280074	257840	unknown	unknown; similar to Yjl083p
YHR163W	SOL3______	-1.04	1251950	1199288	tRNA splicing, putative	unknown
YJL039C	NUP192____	+1.02	306951	311977	nuclear protein targeting	nuclear pore protein
YKL037W	__________	+1.21	133996	161973	unknown	unknown
YLL039C	UBI4______	-1.09	9178185	8420283	protein degradation, ubiquitin-mediated	ubiquitin
YLR344W	RPL26A____	-1.03	13849628	13426293	protein synthesis	ribosomal protein L26A
YMR080C	NAM7______	-1.24	644315	519088	mRNA decay	RNA helicase, putative
YNL131W	TOM22_____	-1.18	1293851	1097927	mitochondrial protein targeting	outer membrane translocase component
YOL039W	RPP2A_____	+1.06	15659830	16529458	protein synthesis	ribosomal protein P2A/L44, acidic
YOR249C	APC5______	-1.04	582554	561181	mitosis	anaphase-promoting complex subunit
YPL228W	CET1______	-1.25	474193	378812	mRNA capping	capping enzyme beta subunit, RNA 5'-triphosphatase
YHR219W	__________	-1.14	4464236	3924234	unknown	unknown; similar to other subtelomerically-encoded proteins
YBL049W	__________	+1.09	123245	134353	unknown	unknown
YDL051W	LHP1______	-1.42	1315088	924526	tRNA processing	RNA binding protein
YDR179C	__________	+1.09	191881	208621	unknown	unknown
YFL042C	__________	-1.04	162859	157301	unknown	unknown; similar to Yhr080p
YGL242C	__________	+1.41	821653	1158435	unknown	unknown; similar to ankyrin and coiled-coil proteins
YHL046C	__________	+1.26	365164	460653	unknown	unknown; similar to members of the Srp1p/Tip1p family
YIL141W	__________	+1.03	108645	111466	unknown	unknown
YJR019C	TES1______	-1.03	161533	156457	fatty acid metabolism	peroxisomal acyl-CoA thioesterase
YKR015C	__________	+1.03	159235	164430	unknown	unknown
YLR172C	DPH5______	-1.23	2014586	1642009	diphthamide biosynthesis	diphthamide methyltransferase
YMR276W	DSK2______	-1.09	1802597	1651071	spindle pole body dupl	ubiquitin-like protein
YNL333W	SNZ2______	-1.04	359451	345222	unknown	unknown; induced in stationary phase
YOR073W	__________	-1.06	413929	389783	unknown	unknown
YPL051W	ARL3______	-1.00	341042	339747	unknown	unknown; Similar to ADP-ribosylation factor
YPR144C	__________	-1.04	110605	106632	unknown	unknown; similar to RNA polymerase beta subunit
YBR121C	GRS1______	-1.12	3547386	3158730	protein synthesis	tRNA synthase, glycyl
YCR059C	__________	-1.22	586066	480837	unknown	unknown
YDL241W	__________	-1.01	267296	263700	unknown	unknown
YDR360W	__________	-1.15	121628	105677	unknown	unknown
YER059W	PCL6______	+1.11	287204	318943	cell cycle	cyclin (Pho85p)
YGL051W	__________	+1.08	261761	281582	unknown	unknown
YHR175W	CTR2______	+1.34	778704	1045315	transport	copper transporter
YJL052W	TDH1______	+1.05	15961476	16738064	glycolysis	glyceraldehyde-3-phosphate dehydrogenase 1
YKL049C	CSE4______	-1.19	1140963	955696	chromatin structure, centromeric	histone-related
YLL051C	FRE6______	+1.02	3338054	3421401	unknown	unknown; similar to ferric reductase Fre2p
YLR356W	__________	+1.34	374203	499932	unknown	unknown; similar to Scm4p, possible Cdc4p-interacting
YMR091C	NPL6______	-1.11	1072931	963122	nuclear protein targeting	unknown
YNL143C	__________	+1.23	385250	473984	unknown	unknown
YOL051W	GAL11_____	-1.02	1296768	1266640	transcription	RNA polymerase II mediator subunit
YOR261C	RPN8______	+1.02	2143324	2192288	protein degradation	26S proteasome regulatory subunit
YPL240C	HSP82_____	-1.29	12443150	9652251	protein folding	HSP90 homolog
YJR162C	__________	-1.14	334337	293134	unknown	unknown; similar to subtelomerically-encoded proteins
YBL061C	SKT5______	+1.13	225958	255985	cell wall biogenesis	chitin synthase regulator
YDL063C	__________	-1.49	480366	321668	unknown	unknown
YDR190C	RVB1______	-1.09	1193152	1090986	unknown	unknown; similar to RUVB
YFL054C	__________	+1.10	109637	120079	unknown	unknown; similar to Fps1p and Ypr192p transmembrane channels
YGL254W	FZF1______	-1.11	185336	166794	sulfite metabolism	(putative) transcription factor
YIL153W	RRD1______	+1.16	408990	474827	drug resistance	unknown
YJR030C	__________	+1.09	290203	316310	unknown	unknown
YKR027W	__________	+1.02	273378	277512	unknown	unknown
YLR184W	__________	-1.10	94923	86648	unknown	unknown
YML055W	SPC2______	+1.14	656142	745297	secretion	signal peptidase subunit
YMR288W	__________	-1.04	108904	104964	unknown	unknown
YNR006W	VPS27_____	+1.20	282687	338579	vacuolar protein targeting	component of class E protein complex
YOR085W	OST3______	-1.12	573190	512447	protein glycosylation	oligosaccharyltransferase complex subunit
YPL061W	ALD6______	+1.05	5045633	5312464	ethanol utilization	acetaldehyde dehydrogenase
YPR156C	__________	+1.36	750384	1023385	unknown	major facilitator superfamily
YBR133C	HSL7______	+1.18	292323	343924	cell cycle	Swe1p (kinase) regulator
YCR070W	__________	+1.41	648969	915384
YDR005C	MAF1______	+1.34	310880	416236	protein targeting (putative)	unknown
YDR370C	__________	+1.09	303660	330960	unknown	unknown
YER068W	MOT2______	+1.17	272192	318811	mating	transcriptional regulator
YGL063W	PUS2______	+1.02	146754	149655	tRNA processing	pseudouridine synthase
YGR170W	PSD2______	+1.12	241412	270189	phospholipid metabolism	phosphatidylserine decarboxylase 2
YHR187W	IKI1______	-1.03	299194	290375	killer toxin sensitivity	unknown
YJL064W	__________	+1.04	348876	361263	unknown	unknown
YKL061W	__________	+1.30	245996	320500	unknown	unknown
YLL063C	AYT1______	-1.22	239981	197003	unknown	transacetylase (putative)
YLR368W	__________	+1.09	244087	265150	unknown	unknown
YMR103C	__________	-1.14	88004	77341	unknown	unknown
YNL155W	__________	+1.08	745003	804556	unknown	unknown
YOL061W	PRS5______	-1.05	1069132	1019281	purine, pyrimidine, tryptophan and histidine biosynthesis	phosphoribosylpyrophosphate synthetase
YOR273C	__________	+1.13	198579	224290	unknown	unknown; similar to members of major facilitator superfamily
YPL251W	__________	-1.18	582978	495479	unknown	unknown
YMR318C	__________	-1.16	2424833	2089526	unknown	unknown; similar to alcohol-dehydrogenases
YBL073W	__________	+1.07	109412	116821	unknown	unknown
YDL075W	RPL31A____	-1.02	14983258	14728619	protein synthesis	ribosomal protein L31A
YDR202C	RAV2______	+1.08	542914	587290	vacuolar acidification (putative)	unknown; regulates V-ATPase
YFL066C	__________	-1.64	420541	257166	unknown	unknown; similar to other subtelomerically-encoded proteins
YGR003W	__________	-1.10	121867	110453	unknown	unknown
YHR017W	YSC83_____	+1.11	270223	299097	unknown	unknown; similar to S.douglasii YSD83
YIL164C	NIT1______	-1.09	224310	206409	unknown	nitrilase
YJR042W	NUP85_____	-1.19	99049	83343	nuclear protein targeting	nuclear pore protein
YKR039W	GAP1______	+1.16	141580	164466	transport	general amino acid permease
YLR196W	PWP1______	-1.56	975463	625598	unknown	unknown; similar to beta-transducin superfamily
YML066C	__________	+1.07	245241	262121	unknown	unknown
YMR298W	__________	-1.04	1033139	997363	unknown	unknown
YNR018W	__________	-1.12	1493352	1338322	unknown	unknown
YOR097C	__________	+1.20	294788	354782	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YPL073C	__________	-1.05	115477	109966	unknown	unknown
YPR164W	KIM3______	-1.06	105150	99605	diepoxybutane and mitomycin C resistance	unknown
YBR145W	ADH5______	-1.52	2662894	1750933	glycolysis	alcohol dehydrogenase V
YCR083W	TRX3______	+1.03	176858	182702	oxidative stress response	thioredoxin, mitochondrial
YDR017C	KCS1______	-1.13	904857	802570	cell wall organization	(putative) transcription factor
YDR382W	RPP2B_____	+1.02	15735163	16089029	protein synthesis	ribosomal protein L45, acidic
YER079W	__________	+1.10	379057	417189	unknown	unknown
YGL075C	MPS2______	+1.03	174515	180140	cytoskeleton	spindle pole body duplication; nuclear envelope/ER protein
YGR182C	__________	+1.41	1086808	1532617	unknown	unknown
YHR199C	__________	-1.01	650658	642413	unknown	unknown; similar to Yhr198p
YJL076W	NET1______	-1.15	168794	147380	silencing	unknown
YKL073W	LHS1______	+1.08	371554	400374	secretion	chaperone; ER protein translocation
YLR008C	__________	-1.12	135391	120663	unknown	unknown
YLR380W	CSR1______	-1.02	766683	751877	unknown	unknown; multicopy suppressor of chs5 spa2 double mutant
YMR115W	__________	+1.02	464261	474919	unknown	unknown
YNL167C	SKO1______	+1.16	333907	388367	transcription	CREB-like transcriptional repressor
YOL073C	__________	+1.17	397354	465490	unknown	unknown
YOR285W	__________	+1.50	1343014	2013947	unknown	unknown; similar to Drosophila melanogaster heat shock
YPL261C	__________	+1.17	166744	195059	unknown	unknown
YBL085W	BOI1______	+1.06	84570	89519	bud growth	binds Bem1p
YDL087C	LUC7______	+1.02	123461	126307	mRNA processing (putative)	unknown; synthetic lethal with cap-binding complex
YFR010W	UBP6______	+1.12	619036	692552	protein degradation, ubiquitin-mediated	deubiquitinating enzyme (putative)
YGR015C	__________	-1.01	177995	176515	unknown	unknown
YHR028C	DAP2______	+1.20	642579	772503	protein degradation	dipeptidyl aminopeptidase B
YIL175W	__________	+1.01	158281	159313	unknown	unknown
YJR054W	__________	+1.38	328221	452364	unknown	unknown
YKR051W	__________	-1.04	366012	353499	unknown	unknown
YLR208W	SEC13_____	-1.03	1579936	1530316	secretion	vesicle coat component
YML078W	CPR3______	+1.21	2409539	2915803	protein folding	peptidyl-prolyl cis-trans isomerase
YMR308C	PSE1______	-1.19	919405	775341	nuclear protein targeting	beta-karyopherin
YNR030W	ECM39_____	-1.05	85628	81221	cell wall biogenesis	unknown
YOR109W	INP53_____	+1.06	910540	966914	vesicle trafficking; phosphatidylinositol metabolism	inositol polyphosphate 5-phosphatase
YPL085W	SEC16_____	-1.03	95832	93313	secretion	vesicle coat component
YPR176C	BET2______	-1.10	91461	83364	protein processing	geranylgeranyltransferase type II beta subunit
YBR157C	ICS2______	-1.11	209100	188133	Cu2+ ion homeostasis (putative)	unknown
YCR094W	CDC50_____	+1.00	82541	82944	cell cycle	unknown
YDR029W	__________	-1.01	123538	122128	unknown	unknown
YDR394W	RPT3______	+1.19	972231	1159764	protein degradation	26S proteasome subunit
YER090W	TRP2______	-1.25	1070351	856798	tryptophan biosynthesis	anthranilate synthase component I
YGL087C	MMS2______	+1.33	364129	485776	DNA repair, postreplication	unknown
YGR194C	XKS1______	+1.23	327157	402653	xylulose utilization	xylulokinase
YHR211W	FLO5______	+1.09	255474	278018	flocculation	flocculin, similar to Flo1p
YJL088W	ARG3______	+1.28	244897	314019	arginine biosynthesis	ornithine carbamoyltransferase
YKL085W	MDH1______	+1.19	969468	1156201	TCA cycle	malate dehydrogenase
YLR020C	__________	-1.02	96440	94503	unknown	unknown; similar to triacylglycerol lipase
YLR392C	__________	+1.15	215575	247072	unknown	unknown
YMR126C	__________	+1.09	234187	255679	unknown	unknown
YNL179C	__________	+1.43	334263	478386	unknown	unknown
YOL085C	__________	+1.15	113429	130532	unknown	unknown
YOR297C	TIM18_____	+1.33	231623	308026	mitochondrial protein targeting	inner membrane translocase component
YPL273W	SAM4______	-1.08	86854	80050	sulfur amino acid metabolism	S-adenosylmethionine:homocysteine S-methyltransferase
YAL004W	__________	+1.70	103428	175432	unknown	unknown
YBR169C	SSE2______	+1.43	222516	317456	heat shock response	HSP70 family
YCR106W	__________	+1.12	202221	227310	unknown	unknown; similar to transcription factors
YDR040C	ENA1______	+1.27	312556	396015	transport	plasma membrane ATPase
YDR407C	TRS120____	+1.11	678372	751267	secretion (putative)	transport protein particle (TRAPP) subunit, 120 kD
YER102W	RPS8B_____	+1.08	15018455	16244985	protein synthesis	ribosomal protein S8B
YGL100W	SEH1______	-1.08	993027	916547	nuclear protein targeting	nuclear pore protein
YGR207C	__________	+1.21	727344	881689	unknown	electron-transferring flavoprotein, beta chain (putative)
YIL004C	BET1______	+1.10	373780	410299	secretion	vesicle recycling; SNARE
YJL101C	GSH1______	+1.06	502852	535486	glutathione biosynthesis	gamma-glutamylcysteine synthetase
YKL096W	CWP2______	+1.05	15936427	16738064	unknown	cell wall protein
YLR033W	__________	+1.41	599475	846296	unknown	involved in temperature-sensitive growth and in pheromone response pathway
YLR405W	__________	-1.04	395112	379713	unknown	unknown
YMR138W	CIN4______	-1.05	292491	279357	mitosis, chromosome segregation	GTP-binding protein
YNL192W	CHS1______	+1.01	112712	114257	cytokinesis	chitin synthase
YOL098C	__________	-1.06	1287485	1213211	unknown	unknown
YOR308C	SNU66_____	-1.14	246473	216552	mRNA splicing (putative)	U4/U6.U5 snRNP protein
YPR003C	__________	+1.10	210933	232392	unknown	unknown; similar to Sul1p and sulfate transporters from
YBL098W	__________	+1.72	195381	336725	unknown	unknown; similar to bacterial NADP/NAD-dependent
YCL003W	__________	+1.22	131935	161087
YDL100C	__________	+1.29	498961	644860	unknown	unknown; similar to E. coli arsenical pump-driving ATPase
YDR223W	__________	+1.22	113758	138702	unknown	unknown
YEL004W	YEA4______	+1.15	176142	202569	unknown	unknown; similar to GOG5, a gene involved in vanadate
YFR023W	PES4______	+1.24	100005	123839	DNA replication	unknown; suppresses DNA polymerase epsilon mutation
YHR040W	__________	-1.16	265352	228345	unknown	unknown; similar to Hit1p, expressed under
YIR011C	STS1______	+1.24	457968	566823	nuclear protein targeting	Rna15 transport factor
YJR067C	YAE1______	-1.03	280541	273117	unknown	unknown
YKR064W	__________	+1.11	93501	103917	unknown	unknown; similar to transcription factors, has Zn[2]-Cys[6]
YLR221C	__________	-1.10	707305	640125	unknown	unknown
YML091C	RPM2______	+1.11	613994	680446	tRNA processing, mitochondrial	RNase P subunit
YNL004W	HRB1______	+1.03	611062	632349	unknown	RNA binding protein (putative)
YNR043W	MVD1______	-1.31	2069137	1580071	sterol metabolism	mevalonate pyrophosphate decarboxylase
YOR122C	PFY1______	+1.15	3608692	4152164	cytoskeleton	profilin
YPL098C	__________	-1.02	749668	737773	unknown	unknown
YPR189W	SKI3______	-1.12	120229	106949	mRNA decay and virus resistance	unknown
YAL017W	FUN31_____	+1.30	413864	539904	unknown	putative protein kinase
YBR181C	RPS6B_____	+1.12	14966120	16714709	protein synthesis	ribosomal protein S6B
YCRX11W	__________	+1.13	255151	289079
YDR052C	DBF4______	+1.30	169890	220867	cell cycle	Cdc7p (kinase) regulator
YDR419W	RAD30_____	+1.10	113361	124303	DNA repair	unknown
YER114C	BOI2______	-1.11	185403	166599	bud emergence	binds Bem1p
YGL112C	TAF60_____	-1.00	436184	435544	transcription	TFIID 60 kD subunit
YGR219W	__________	+1.13	1280487	1453071	unknown	unknown
YIL015W	BAR1______	+1.17	118693	138466	mating	alpha-factor degradation
YJL113W	__________	+1.04	97744	101364	unknown	unknown
YKL109W	HAP4______	+1.09	244994	267915	transcription	component of heterotrimeric CCAAT-binding factor
YLR043C	TRX1______	+1.24	2761001	3419948	DNA replication	thioredoxin I
YLR415C	__________	+1.06	180361	190395	unknown	unknown
YMR150C	IMP1______	-1.03	500580	487876	protein processing	mitochondrial inner membrane protease

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YNL204C	SPS18_____	-1.03	149331	144496	sporulation	unknown
YOL108C	INO4______	+1.08	313373	339464	phospholipid biosynthesis	transcription factor
YOR320C	__________	-1.04	921457	881881	unknown	unknown
YPR015C	__________	+1.02	169881	173656	unknown	unknown; similar to human GT box-binding protein
YBL108W	__________	+1.16	102984	119060	unknown	unknown
YCL016C	__________	+1.19	148161	175712	unknown	unknown
YDL112W	TRM3______	+1.13	94397	106509	tRNA processing	tRNA robose methylase
YEL016C	__________	+1.10	150536	166316	unknown	unknown; similar to Ycr026p
YFR033C	QCR6______	+1.63	1154898	1886492	oxidative phosphorylation	ubiquinol cytochrome-c reductase subunit
YGR038W	ORM1______	+1.01	598438	606820	unknown	unknown
YHR051W	COX6______	+1.31	2338077	3068794	oxidative phosphorylation	cytochrome-c oxidase subunit VI
YIR021W	MRS1______	+1.01	177967	179475	mRNA splicing, COB mRNA	unknown
YJR079W	__________	+1.07	101648	108327	unknown	unknown
YKR076W	ECM4______	+1.68	193020	325096	cell wall biogenesis	unknown
YLR231C	__________	+1.33	360566	480628	unknown	unknown; similar to rat kynureninase (PIR:PS0370)
YML101C	__________	+1.01	467416	470858	unknown	unknown
YNL016W	PUB1______	-1.21	3352601	2764905	mRNA processing	poly(A)+ RNA-binding protein
YNR055C	HOL1______	-1.13	1148011	1019030	transport	(putative) multidrug resistance permease
YOR134W	BAG7______	+1.03	189630	196134	signaling	GTPase activating protein
YPL110C	__________	-1.09	115893	105995	unknown	unknown; similar to Pho81p
YPR201W	ARR3______	-1.05	195189	185912	arsenic resistance	arsenite transporter
YAL028W	__________	+1.25	180634	226607	unknown	unknown
YBR193C	MED8______	+1.07	178705	190886	transcription	RNA polymerase II mediator subunit
YDR064W	RPS13_____	+1.09	7061838	7679103	protein synthesis	ribosomal protein S13
YDR431W	__________	+1.10	132419	146154	unknown	unknown
YER125W	RSP5______	+1.03	591280	609505	protein degradation, ubiquitin-mediated	ubiquitin-protein ligase (E3 enzyme)
YGL124C	MON1______	+1.11	186152	207248	secretion (putative)	unknown; brefeldin A sensitive; monensin sensitive
YGR231C	PHB2______	+1.09	2475104	2697728	aging	prohibitin homolog
YIL027C	__________	+1.20	181425	217920	unknown	unknown
YJL125C	GCD14_____	-1.17	398082	339625	protein synthesis	translation repressor of GCN4
YKL121W	__________	+1.23	94665	116476	unknown	unknown
YLR055C	SPT8______	+1.06	423317	449950	chromatin structure	histone acetyltransferase complex subunit
YLR425W	TUS1______	-1.24	225327	181248	unknown	unknown; interacts with Sec1p
YMR160W	__________	-1.15	123800	107954	unknown	unknown
YNL216W	RAP1______	-1.25	264296	211841	transcription	transcriptional repressor and activator
YOL120C	RPL18A____	+1.04	15926191	16529098	protein synthesis	ribosomal protein L18A
YOR332W	VMA4______	-1.10	6466588	5870402	vacuolar acidification	vacuolar H+-ATPase V1 domain 27 KD subunit
YPR027C	__________	-1.23	326250	264743	unknown	unknown; similar to Ynl019p and Ynl033p
YBR007C	__________	+1.28	256132	328229	unknown	unknown
YCL028W	RNQ1______	+1.13	966609	1092728	unknown	unknown; "transferable epigenetic modifier"
YDL124W	__________	+2.07	1001946	2069198	unknown	unknown
YEL027W	CUP5______	-1.04	6610647	6339098	ATP synthesis	vacuolar ATP synthase subunit
YFR044C	__________	+1.08	1748420	1891114	unknown	unknown; similar to Ybr281p
YGR045C	__________	+1.06	106084	112896	unknown	unknown
YHR062C	RPP1______	-1.26	460028	365805	rRNA and tRNA processing	RNase P and RNase MRP subunit
YIR032C	DAL3______	+1.06	95241	101368	purine metabolism	ureidoglycolate hydrolase
YJR092W	BUD4______	+1.05	100237	105743	bud site selection, axial	unknown
YKR088C	__________	+1.08	615569	666836	unknown	unknown
YLR243W	__________	-1.10	550874	499542	unknown	unknown
YML112W	CTK3______	+1.01	435767	441178	cell cycle (putative)	protein kinase subunit
YNL028W	__________	+1.00	125205	125531	unknown	unknown
YNR067C	__________	+1.37	832390	1139787	unknown	unknown
YOR144C	EFD1______	+1.08	167809	180616	recombination (putative)	unknown
YPL122C	TFB2______	-1.07	411980	384951	transcription	TFIIH 55 kD subunit
YAL038W	CDC19_____	+1.04	16007003	16595014	glycolysis	pyruvate kinase
YBR205W	KTR3______	+1.01	914761	926384	protein glycosylation	putative alpha-1,2-mannosyltransferase
YDR076W	RAD55_____	+1.14	191021	217438	DNA repair and recombination	RecA homolog
YDR443C	SSN2______	+1.20	1971043	2356415	transcription	RNA polymerase II mediator subunit
YER137C	__________	-1.19	138344	116499	unknown	unknown
YGL136C	__________	+1.24	402204	496751	unknown	unknown; similar to E. coli ftsJ protein
YGR243W	__________	+1.58	114805	181605	unknown	unknown
YIL039W	__________	+1.05	785732	826727	unknown	unknown
YJL137C	GLG2______	+1.43	206800	296196	glycogen metabolism	glycogen synthesis initiator
YKL133C	__________	+1.37	164940	226045	unknown	unknown
YLR067C	PET309____	-1.07	99467	93318	RNA processing	COX1 mRNA stability
YLR437C	__________	+1.03	774906	801040	unknown	unknown
YMR172W	HOT1______	+1.11	278547	310567	osmotic stress response (putative)	unknown; nuclear protein; similar to Msn1p
YNL228W	__________	+1.04	524934	545771	unknown	unknown
YOL132W	__________	+1.04	135099	140980	unknown	unknown; similar to glycophospholipid-anchored surface glycoprotein GAS1
YPR039W	__________	-1.16	244527	210782	unknown	unknown
YBR017C	KAP104____	-1.12	348035	309796	nuclear protein targeting	beta-karyopherin
YCL040W	GLK1______	+2.60	518650	1347183	glycolysis	glucokinase
YDL134C	PPH21_____	+1.33	1383524	1833553	cell cycle	protein phosphatase 2A
YDR259C	YAP6______	+1.10	181763	199816	salt tolerance	basic leu zipper transcription factor
YEL039C	CYC7______	+1.11	196056	218471	respiration	cytochrome c (isoform 2)
YFR056C	__________	-1.35	167834	124156	unknown	unknown
YGR057C	LST7______	-1.06	118292	111223	secretion	unknown; post-Golgi
YHR072W	ERG7______	-1.09	188869	172605	sterol metabolism	lanosterol synthase
YIR044C	__________	+1.03	232698	238902	unknown	unknown
YJR103W	URA8______	-1.00	320878	319984	pyrimidine biosynthesis	CTP synthase
YKR100C	__________	+1.02	338324	343402	unknown	unknown
YLR255C	__________	-1.03	153006	148836	unknown	unknown
YML123C	PHO84_____	-1.67	10169057	6093764	transport	inorganic phosphate permease
YNL038W	__________	-1.04	760876	728502	unknown	unknown
YOR156C	NFI1______	+1.03	577369	592921	unknown	interacts with Cdc12p in 2-hybrid assay
YPL134C	ODC1______	-1.04	308956	296482	unknown	unknown; similar to mitochondrial ADP/ATP carrier proteins
YAL049C	__________	+1.22	403405	493426	unknown	unknown
YBR217W	APG12_____	+1.12	240540	268302	autophagy	unknown
YDR088C	SLU7______	+1.11	248683	277131	mRNA splicing	3' splice site selection
YDR455C	__________	-1.07	133644	124825	unknown	unknown
YER146W	LSM5______	-1.14	819741	717379	mRNA splicing (putative)	unknown; similar to snRNA-associated protein
YGL148W	ARO2______	-1.24	3293202	2649307	aromatic amino acid biosynthesis	chorismate synthase
YGR255C	COQ6______	+1.32	569124	749745	ubiquinone biosynthesis	monooxygenase
YIL051C	MMD1______	-1.26	9175095	7293476	maintenance of mitochondrial DNA	unknown
YJL149W	__________	+1.19	354907	423390	unknown	unknown
YKL145W	RPT1______	-1.09	2378756	2178996	protein degradation, ubiquitin-mediated	26S proteasome subunit
YLR079W	SIC1______	+1.23	709728	874225	cell cycle	Cdc28p-Clb5 protein kinase inhibitor
YLR449W	FPR4______	-1.36	2898532	2132983	protein folding (putative)	similar to peptidyl-prolyl cis-trans isomerase
YMR182C	RGM1______	-1.15	363134	316869	transcription	putative repressor
YNL240C	NAR1______	-1.26	316507	251898	nuclear organization and biogenesis (putative)	unknown; similar to human Narf

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YOL144W	NOP8______	-1.28	616599	482578	ribosome biogenesis (putative)	unknown; nucleolar protein
YOR354C	__________	+1.09	431446	470056	unknown	unknown
YPR051W	MAK3______	+1.05	631630	664965	viral propagation	L-A virus GAG protein N-acetyltransferase
YBR029C	CDS1______	-1.10	152380	138160	lipid metabolism	CDP-diacylglycerol synthase
YCL052C	PBN1______	+1.26	415644	523803	protein degradation	protease B
YDL146W	__________	+1.19	149205	176897	unknown	unknown
YDR267C	__________	-1.07	414108	386014	unknown	unknown; similar to Sec13p and other proteins with WD
YEL051W	VMA8______	+1.23	2517702	3109297	vacuolar acidification	vacuolar H+-ATPase V1 domain D subunit
YGR069W	__________	+1.26	406838	513928	unknown	unknown
YHR083W	__________	+1.03	720766	740195	unknown	unknown
YJR115W	__________	+1.23	395804	487047	unknown	unknown
YLR263W	RED1______	-1.02	124332	121823	meiosis, synapsis	synaptonemal complex component (putative)
YMR002W	__________	+1.42	1636843	2316479	unknown	unknown
YNL050C	__________	-1.04	521049	503244	unknown	unknown
YOR168W	GLN4______	-1.23	488132	396775	protein synthesis	tRNA synthetase, glutaminyl
YPL146C	__________	-1.34	919576	685528	unknown	unknown
YAL063C	FLO9______	+1.17	301744	353940	flocculation	cell wall protein
YBR229C	ROT2______	+1.02	421720	430927	cytoskeleton	glucosidase II
YDR467C	__________	+1.13	247986	279350	unknown	unknown
YER157W	SEC34_____	+1.01	272356	275994	secretion	Golgi protein retention
YGL160W	__________	+1.08	190785	205117	unknown	unknown
YGR267C	FOL2______	-1.03	1067104	1039856	folate biosynthesis	GTP cyclohydrolase I
YIL063C	YRB2______	+1.18	780459	924523	nuclear export	Ran-GTPase-binding protein
YJL161W	__________	+2.06	148271	305467	unknown	unknown
YKL157W	APE2______	-1.01	761801	753956	protein degradation	aminopeptidase yscII
YLR091W	__________	-1.17	176639	150761	unknown	unknown
YLR461W	PAU4______	+1.17	378435	443244	unknown	unknown; seripauperin family
YNL252C	MRPL17____	+1.06	414985	438697	protein synthesis	ribosomal protein, mitochondrial L17
YOL156W	HXT11_____	-1.05	193073	183447	transport	hexose permease
YOR366W	__________	-1.04	178627	171096	unknown	unknown
YPR063C	__________	-1.06	913690	859731	unknown	unknown
YBR041W	FAT1______	-1.02	87985	86571	transport	long-chain fatty acid transporter
YCL064C	CHA1______	-1.54	3327796	2159899	hydroxy amino acid metabolism	L-serine/L-threonine deaminase
YDL158C	__________	-1.09	123641	113193	unknown	unknown
YDR279W	__________	-1.00	314074	313404	unknown	unknown
YEL062W	NPR2______	+1.09	137368	149187	nitrogen transport	transcription factor
YGR081C	__________	-1.04	592306	571405	unknown	unknown; similar to chicken myosin heavy chain PIR:A29320
YHR095W	__________	+1.06	281653	299842	unknown	unknown
YJR127C	ZMS1______	+1.22	679619	831162	unknown	unknown; similar to Adr1p and Yml081p
YLR275W	SMD2______	+1.04	304110	316368	mRNA splicing	U1 snRNP protein
YMR014W	__________	-1.28	811217	634572	unknown	unknown
YNL060C	__________	-1.35	1177873	873303
YOR180C	DCI1______	-1.15	156830	135889	fatty acid metabolism	delta(3,5)-delta(2,4)-dienoyl-CoA isomerase
YPL158C	__________	+1.11	518566	573085	unknown	unknown
YAR009C	__________	+1.00	83959	84212	unknown	unknown
YBR241C	__________	+1.10	177041	195518	unknown	unknown; similar to sugar permeases
YDR110W	FOB1______	-1.04	230136	221988	DNA replication(putative)	fork blocking protein
YDR479C	__________	+1.16	277221	321459	unknown	unknown
YER166W	__________	+1.09	91496	99453	unknown	unknown; similar to members of the Drs2p family of P-type
YGL172W	NUP49_____	-1.00	275817	275544	nuclear protein targeting	nuclear pore protein
YGR279C	SCW4______	-1.03	6746891	6581608	cell wall biogenesis	glucanase (putative)
YIL072W	HOP1______	+1.00	144149	144329	meiosis, synapsis	DNA binding protein
YJL173C	RFA3______	+1.14	774536	881240	DNA replication	replication factor A, 13 kD subunit
YKL169C	__________	+1.15	389691	447951	unknown	unknown
YLR103C	CDC45_____	+1.03	344995	355349	DNA replication	pre-replicative complex subunit (putative)
YMR205C	PFK2______	-1.50	2730788	1821669	glycolysis	phosphofructokinase
YNL264C	PDR17_____	-1.07	515415	479649	drug resistance	unknown
YOR002W	ALG6______	-1.00	808718	805154	protein glycosylation	glucosyltransferase
YOR378W	__________	-1.28	177637	138656	unknown	unknown; similar to members of major facilitator superfamily
YPR075C	OPY2______	+1.24	477557	594265	signaling (putative)	pheromone pathway
YBR053C	__________	+1.56	363228	565128	unknown	unknown; similar to rat calcium-binding protein regucalcin
YCLX03C	__________	+1.05	90918	95374
YDL170W	UGA3______	+1.15	196127	225010	transcription	activator of GABA catabolic genes
YDR291W	__________	-1.02	147041	144362	unknown	unknown; similar to Sgs1p and other DNA helicases
YEL074W	__________	+1.05	281481	294363	unknown	unknown
YGR093W	__________	-1.10	414757	376275	unknown	unknown
YHR107C	CDC12_____	-1.16	1256144	1083373	cytokinesis	septin
YJR139C	HOM6______	-1.09	3766287	3466437	methionine and threonine biosynthesis	homoserine dehydrogenase
YLR287C	__________	-1.01	537524	533843	unknown	unknown
YMR026C	PEX12_____	+1.04	438651	454526	peroxisome biogenesis	integral membrane protein
YNL072W	RNH35_____	+1.00	403219	403766	DNA replication (putative)	ribonuclease H
YOR192C	__________	-1.11	272923	245826	unknown	putative thiamine transporter
YPL170W	__________	-1.03	100812	97468	unknown	unknown
YAR031W	__________	-1.04	306929	293731	unknown	unknown; similar to subtelomerically-encoded proteins
YBR253W	SRB6______	+1.23	405971	498179	transcription	RNA polymerase mediator subunit
YDR122W	KIN1______	+1.24	227962	282242	unknown	protein kinase
YDR491C	__________	-1.14	160576	141206	unknown	unknown; similar to Hrd312p
YER177W	BMH1______	+1.18	6677639	7878591	unknown	unknown; similar to mammalian 14-3-3 proteins
YGL184C	STR3______	+1.07	244962	260929	methionine biosynthesis	cystathionine beta-lyase
YGR291C	__________	+1.00	277439	278228	unknown	unknown
YIL083C	__________	-1.17	515802	439780	unknown	unknown
YJL185C	__________	+1.08	310217	333638	unknown	unknown
YKL181W	PRS1______	-1.39	3194334	2301524	purine, pyrimidine, tryptophan and histidine biosynthesis	phosphoribosylpyrophosphate synthetase
YLR115W	CFT2______	-1.07	439816	412930	mRNA 3'-end processing	cleavage/polyadenylation factor CF II component
YMR217W	GUA1______	-1.75	8185530	4682772	purine metabolism	GMP synthase
YNL276C	__________	-1.09	109194	99865	unknown	unknown
YOR014W	RTS1______	+1.04	580595	605359	stress response	protein phosphatase 2A B-type regulatory subunit
YOR390W	__________	-1.06	86325	81798	unknown	unknown
YPR087W	__________	+1.08	1255150	1351108	unknown	unknown
YBR065C	ECM2______	-1.11	145033	131047	cell wall biogenesis and mRNA splicing (putative)	unknown
YCR003W	MRPL32____	+1.17	128731	151040	protein synthesis	ribosomal protein, mitochondrial L32
YDL182W	LYS20_____	-1.43	3015524	2103130	lysine biosynthesis	homocitrate synthase
YDR303C	__________	-1.03	483630	470998	unknown	unknown; similar to transcription factors
YER007W	PAC2______	+1.13	173638	197060	mitosis	unknown; microtubule stability
YGR105W	VMA21_____	-1.00	575483	574278	vacuolar acidification	vacuolar H+-ATPase assembly protein
YHR119W	SET1______	+1.18	1558012	1844996	transcription	trithorax protein family
YJR151C	__________	+1.19	180481	215589	unknown	unknown
YLR298C	YHC1______	+1.20	292913	350063	mRNA splicing	U1 snRNP protein
YMR037C	MSN2______	+1.12	222719	250273	stress response	transcriptional activator
YNL084C	END3______	+1.11	804364	894935	endocytosis	actin cytoskeleton regulatory complex component

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YOR202W	HIS3______	+13.13	142710	1873803	histidine biosynthesis	imidazoleglycerol-phosphate dehydratase
YPL182C	__________	+1.03	81561	84043	unknown	unknown
YBL004W	__________	+1.41	117835	166571	unknown	unknown; major facilitator superfamily
YBR265W	TSC10_____	-1.06	415821	393515	sphingolipid biosynthesis	3-ketosphinganine reductase
YDL004W	ATP16_____	+1.50	864147	1292235	ATP synthesis	F1F0-ATPase subunit
YDR134C	__________	+1.06	14967993	15836538	unknown	unknown
YDR503C	LPP1______	+1.28	602639	772986	phospholipid metabolism	lipid phosphate phosphatase
YFL002C	SPB4______	+1.08	340819	367298	rRNA processing, 25S	RNA helicase
YGL196W	__________	+1.34	328039	439030	unknown	unknown
YHL003C	LAG1______	+1.06	343930	363748	aging	unknown
YIL095W	PRK1______	+1.14	337227	384609	unknown	protein kinase
YJL197W	UBP12_____	+1.05	112677	117989	protein degradation, ubiquitin-mediated	ubiquitin-specific protease
YKL193C	SDS22_____	+1.28	314673	403767	glucose repression	Glc7p regulatory subunit
YLR127C	APC2______	+1.10	161853	178632	mitosis	anaphase promoting complex subunit
YML004C	GLO1______	+1.11	1340574	1489384	amino acid metabolism	glyoxalase I
YMR229C	RRP5______	-1.90	3209016	1688670	rRNA processing	unknown; required for pre-rRNA cleavage
YNL286W	CUS2______	-1.35	753326	558279	mRNA splicing, putative	unknown
YOR026W	BUB3______	+1.10	383874	420875	cell cycle, checkpoint	unknown
YPL004C	__________	+1.13	1483265	1682934	unknown	unknown; similar to tropomyosin
YPR099C	__________	+1.04	560928	584299	unknown	unknown
YBR077C	__________	+1.50	282845	425069	unknown	unknown
YCR015C	__________	+1.29	139776	180707	unknown	unknown
YDL194W	SNF3______	+1.19	96737	115311	transport	glucose permease
YDR315C	IPK1______	+1.54	155008	238608	signaling (putative)	inositol(1,4,5)P3 6-kinase
YER017C	AFG3______	+1.08	256063	277057	protein degradation	mitochondrial metalloprotease
YGL004C	__________	+1.25	87619	109269	unknown	unknown
YGR115C	__________	-1.45	328278	226996	unknown	unknown; similar to Sly41p, questionable ORF
YHR131C	__________	+1.12	423890	472902	unknown	unknown
YJL004C	SYS1______	+1.02	364495	372529	secretion (putative)	unknown; overexpression suppresse mutation in ypt6
YKL004W	AUR1______	-1.12	1353467	1208314	sphingolipid metabolism	phosphatidylinositol:ceramide phosphoinositol transferase
YLL004W	ORC3______	+1.09	153082	167369	DNA replication	origin recognition complex, 62 kDa subunit
YLR310C	CDC25_____	+1.10	827009	909336	signaling	GDP/GTP exchange factor for Ras1p and Ras2p
YMR048W	__________	-1.05	267021	254475	unknown	unknown
YNL096C	RPS7B_____	-1.01	11123260	11004481	protein synthesis	ribosomal protein S7B
YOL004W	SIN3______	-1.03	598001	579298	transcription	transcriptional regulator
YOR214C	__________	-1.15	118594	103498	unknown	unknown
YPL193W	RSA1______	-1.29	246133	190187	ribosome biogenesis (putative)	unknown
YAR060C	__________	-1.18	195499	165739	unknown	identical to Yhr2p
YBL014C	RRN6______	+1.09	131618	143356	transcription	component of rDNA transcription factor complex
YBR277C	__________	+1.14	160527	182694	unknown	unknown
YDL016C	__________	+1.44	379607	545215	unknown	unknown
YDR146C	SWI5______	+1.18	154564	182537	cell cycle	transcription factor, regulates HO
YDR515W	SLF1______	+1.20	253443	305206	Cu2+ ion homeostasis	CuS biomineralization
YGL208W	SIP2______	+1.25	191541	239942	transcription	component of Snf1 protein complex
YHL012W	__________	+1.06	286946	303365	unknown	unknown; similar to UTP glucose-1-phosphate
YIL106W	MOB1______	+1.21	365331	443669	mitosis	unknown; binds Mps1p and Dbf2p
YJL209W	CBP1______	+1.00	369973	371317	mRNA stability, COB mRNA	unknown
YKL205W	LOS1______	-1.08	1576554	1464500	tRNA splicing	nuclear pore protein
YLR139C	SLS1______	+1.09	278155	301816	mitochondrial metabolism	integral membrane protein
YML013W	__________	-1.07	155761	145351	unknown	unknown
YMR241W	YHM2______	-1.16	815218	700333	unknown	suppresses HM mutant
YNL298W	CLA4______	-1.21	102217	84779	cytokinesis	protein kinase
YOR038C	HIR2______	+1.04	140540	145933	transcription	histone transcription inhibitor
YPL016W	SWI1______	-1.12	113118	100611	transcription	component of SWI/SNF global activator complex
YPR111W	DBF20_____	+1.07	225034	240520	cell cycle	M phase; protein kinase
YBR088C	POL30_____	+1.30	306288	399141	DNA replication	DNA polymerase processivity factor
YCR025C	__________	+1.39	143710	199494	unknown	unknown
YDL206W	__________	+1.31	167328	218982	unknown	unknown; similar to transporter proteins
YDR325W	YCG1______	+1.23	199341	246114	mitosis, chromosome condensation (putative)	unknown; high copy suppressor of brn1 mutation
YER028C	__________	+1.08	187745	202221	unknown	unknown; similar to Mig2p
YGL016W	KAP122____	-1.05	385505	368583	drug resistance	karyopherin-beta family protein
YGR127W	__________	+1.42	225776	320039	unknown	unknown; similar to mouse T10 protein PIR:S37448
YHR141C	RPL42B____	+1.07	15489922	16631445	protein synthesis	ribosomal protein L42B
YJL016W	__________	+1.47	337718	496063	unknown	unknown
YKL015W	PUT3______	+1.17	391156	457562	transcription	positive regulator of PUT genes
YLL016W	SDC25_____	+1.10	139966	154290	signaling (putative)	GDP/GTP exchange factor for Ras
YLR321C	SFH1______	+1.01	410178	413472	chromatin structure	chromatin remodeling complex subunit
YMR058W	FET3______	-1.78	1331943	748096	transport	cell surface ferroxidase
YNL108C	__________	-1.24	708689	572600	unknown	unknown
YOL016C	CMK2______	+1.68	821225	1375904	signaling	calmodulin-dependent protein kinase
YOR226C	ISU2______	-1.28	823943	642720	iron homeostasis	unknown; similar to iron-sulfur cluster protein nifU
YPL205C	__________	-1.48	291658	197218	unknown	unknown
YBL026W	LSM2______	+1.38	434106	599301	mRNA splicing	core snRNP protein
YBR289W	SNF5______	+1.50	2143309	3222380	transcription	component of SWI/SNF global activator complex
YDL028C	MPS1______	+1.21	227733	275853	mitosis, checkpoint	protein kinase
YDR158W	HOM2______	-1.17	2850569	2431122	threonine and methionine biosynthesis	aspartate-semialdehyde dehydrogenase
YDR527W	__________	-1.04	314164	302193	unknown	unknown
YGL220W	__________	+1.10	878486	965961	unknown	unknown; similar to Vibrio alginolyticus bolA protein
YHL024W	RIM4______	+1.18	150030	177405	sporulation (putative)	unknown; N-terminus has putative RNA binding domain
YIL118W	RHO3______	+1.03	81946	84355	cytoskeleton	GTP-binding protein, rho family
YJL221C	FSP2______	+1.26	157264	198786	unknown	unknown; similar to maltase
YKL217W	JEN1______	+1.06	190139	202427	transport	lactate transporter
YLR151C	PCD1______	+1.24	113583	140747	unknown	nudix hydrolase family
YMR253C	__________	-1.13	107306	95018	unknown	major facilitator superfamily
YNL310C	__________	-1.00	531128	529587	unknown	unknown
YOR050C	__________	+1.06	214007	226094	unknown	unknown
YPL028W	ERG10_____	-1.04	3606003	3455977	sterol metabolism	acetoacetyl CoA thiolase
YPR123C	__________	-1.18	213479	180649	unknown	unknown
YBR099C	__________	+1.26	139810	175570	unknown	unknown
YCR036W	RBK1______	+1.36	198073	269879	ribose metabolism	ribokinase
YDL218W	__________	+1.06	151281	159796	unknown	unknown
YDR337W	MRPS28____	+1.22	346937	424708	protein synthesis	ribosomal protein, mitochondrial S28
YER039C	HVG1______	+1.17	151564	177253	protein glycosylation (putative)	nucleotide sugar transporter (putative)
YGL028C	SCW11_____	+1.20	1154159	1388042	cell wall biogenesis	glucanase (putative)
YGR139W	__________	+1.09	122645	133919	unknown	unknown
YHR152W	SPO12_____	+1.21	591198	716109	meiosis; mitotic cell cycle	unknown
YJL028W	__________	+1.04	160627	167289	unknown	unknown
YKL027W	__________	+1.02	471639	482838	unknown	unknown; similar to E. coli molybdopterin-converting factor
YLL028W	TPO1______	-1.30	455603	349894	transport	polyamine transport protein
YLR333C	RPS25B____	+1.03	15213278	15674731	protein synthesis	ribosomal protein S25B

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YMR070W	MOT3______	+1.07	860448	921538	mating	transcriptional regulator of pheremone-responsive genes
YNL120C	__________	-1.17	266090	227400	unknown	unknown
YOL028C	YAP7______	-1.28	310378	242749	transcription	basic leucine zipper transcription factor
YOR238W	__________	+1.14	429221	487691	unknown	unknown
YPL217C	BMS1______	-1.52	1918974	1264059	unknown	unknown; essential
YBL038W	MRPL16____	+1.02	104762	107144	protein synthesis	ribosomal protein, mitochondrial L16
YBR301W	__________	+1.17	325745	379824	unknown	unknown; similar to Ykl224p and other members of the PAU1
YDL040C	NAT1______	-1.08	658127	609932	protein processing	protein N-acetyltransferase subunit
YDR170C	SEC7______	-1.11	1237388	1118031	secretion	vesicle coat component
YDR539W	__________	-1.03	392157	380026	unknown	unknown
YFL033C	RIM15_____	+1.01	443980	449238	meiosis	protein kinase
YGL231C	__________	+1.40	835697	1169379	unknown	unknown
YHL035C	__________	+2.02	534566	1077474	unknown	unknown; ATP-binding cassette (ABC) superfamily
YIL130W	__________	+1.09	738896	805836	unknown	unknown; similar to transcription factors
YJR009C	TDH2______	+1.05	16008005	16738064	glycolysis	glyceraldehyde-3-phosphate dehydrogenase 2
YKR004C	ECM9______	-1.06	1331203	1253228	cell wall biogenesis	unknown
YLR161W	__________	-1.06	1973562	1864580	unknown	unknown
YML035C	AMD1______	-1.19	578646	485188	protein glycosylation	alpha-mannosidase, putative
YMR265C	__________	+1.11	419233	466064	unknown	unknown
YNL322C	KRE1______	+1.14	1352782	1547180	cell wall biogenesis	beta-1,6-glucan assembly
YOR062C	__________	-1.04	146225	140573	unknown	unknown
YPL040C	ISM1______	-1.41	483690	342219	protein synthesis	tRNA synthetase, mitochondrial, isoleucyl
YPR135W	CTF4______	-1.01	152044	150944	DNA replication	polymerase alpha binding protein
YBR110W	ALG1______	+1.16	411966	478909	protein glycosylation	beta-1,4-mannosyltransferase
YCR048W	ARE1______	-1.18	136850	116196	sterol metabolism	acyl-CoA sterol acyltransferase
YDL230W	PTP1______	+1.14	265293	302789	unknown	protein phosphatase
YDR349C	YPS7______	+1.23	437770	540532	protein degradation	GPI-anchored aspartic protease
YER049W	__________	-1.36	1006069	741303	unknown	unknown
YGL040C	HEM2______	+1.01	580335	588345	heme biosynthesis	porphobilinogen synthase
YGR151C	__________	-1.04	563751	539959	unknown	unknown
YHR164C	DNA2______	+1.07	384617	410656	DNA replication	DNA helicase
YJL041W	NSP1______	-1.28	907087	710104	nuclear protein targeting	nuclear pore protein
YKL038W	RGT1______	-1.23	109262	88794	(glucose) transport	transcriptional regulator of glucose transporters
YLL040C	VPS13_____	-1.22	124715	102401	vacuolar protein targeting	component of peripheral membrane protein complex
YLR345W	__________	+1.38	238098	328051	unknown	unknown
YMR081C	ISF1______	+1.12	178133	199857	RNA splicing, mitochondrial	interacts with Nam7p
YNL132W	__________	-1.64	630821	383836	unknown	unknown; similar to Achlya ambisexualis antheridiol steroid
YOL040C	RPS15_____	+1.05	15804316	16604213	protein synthesis	ribosomal protein S15
YOR250C	CLP1______	-1.03	553574	538949	mRNA 3'-end processing	cleavage/polyadenylation factor CF IA component
YPL229W	__________	+2.21	635142	1401727	unknown	unknown
YBL050W	SEC17_____	+1.25	680147	849496	secretion	SNAP; vesicle fusion
YDL052C	SLC1______	-1.01	328611	326871	phospholipid metabolism	fatty acyltransferase
YFL043C	__________	+1.19	243306	289569	unknown	unknown
YGL243W	TAD1______	+1.10	248696	274295	tRNA processing	tRNA-specific adenosine deaminase
YIL142W	CCT2______	-1.39	2394762	1718437	protein folding	cytoplasmic chaperonin complex
YJR020W	__________	-1.15	140276	121940	unknown	unknown
YKR016W	__________	+1.11	568829	631332	unknown	unknown
YLR173W	__________	-1.25	135722	108958	unknown	unknown
YML045W	__________	-1.28	5828239	4544674	unknown	unknown
YMR277W	FCP1______	-1.34	843246	630208	transcription	TFIIF interacting component of CTD phosphatase
YNL334C	SNO2______	+1.01	238174	239990	unknown	unknown; induced in stationary phase
YOR074C	CDC21_____	-1.09	559266	512960	DNA replication	thymidylate synthase
YPL052W	__________	+1.35	302990	408895	unknown	unknown
YPR145W	ASN1______	-1.25	4075251	3264525	asparagine biosynthesis	asparagine synthetase
YBR122C	MRPL36____	+1.01	355801	358076	protein synthesis	ribosomal protein, mitochondrial L36
YCR060W	__________	+1.04	385958	402061	unknown	unknown; similar to stress inducible protein Sti1p, has
YDL242W	__________	-1.01	105805	104807	unknown	unknown
YDR361C	__________	-1.30	811504	623104	unknown	unknown
YER060W	FCY21_____	+1.02	172881	176846	transport	purine-cytosine permease
YGL052W	__________	+1.02	198446	202065	unknown	unknown
YHR176W	__________	-1.03	145985	141438	unknown	unknown; similar to flavin-containing monooxygenases
YJL053W	PEP8______	+1.14	480552	548625	vacuolar protein targeting	vacuolar peripheral memebrane protein
YKL050C	__________	-1.08	109768	101902	unknown	unknown
YLL052C	AQY2______	-3.36	8198867	2438349	transport, water	aquaporin (putative)
YLR357W	RSC2______	-1.18	256258	217681	chromatin structure	chromatin remodeling complex subunit
YMR092C	AIP1______	-1.40	307193	219877	cytoskeleton	actin cortical patch component
YNL144C	__________	-1.06	160015	150373	unknown	unknown
YOL052C	SPE2______	-1.41	631956	447277	polyamine metabolism	S-adenosylmethionine decarboxylase
YOR262W	__________	-1.17	460838	394466	unknown	unknown
YPL241C	CIN2______	-1.12	326877	290561	mitosis, chromosome segregation	unknown
YBL062W	__________	+1.32	388091	512243	unknown	unknown
YDL064W	UBC9______	+1.08	743989	802001	protein degradation, ubiquitin-mediated	E2 ub.-conjugating enzyme
YDR191W	HST4______	+1.13	164594	185835	silencing (telomere)	unknown; similar to nuclear lamins
YFL055W	AGP3______	+1.07	124839	133241	transport	general amino acid permease
YGL255W	ZRT1______	-2.69	788716	293625	transport	high-affinity zinc transporter
YHR006W	STP2______	+1.24	268288	333820	tRNA splicing	unknown
YIL154C	(IMP2)____	+1.12	428235	479032	stress response	transcriptional repressor
YJR031C	GEA1______	+1.23	582653	716958	secretion	GDP/GTP exchange factor for ARF
YKR028W	SAP190____	+1.13	1182059	1339739	cell cycle	Sit4p-associated protein
YLR185W	RPL37A____	-1.04	14071731	13532006	protein synthesis	ribosomal protein L37A
YMR289W	__________	-1.01	456976	450401	unknown	unknown
YNR007C	AUT1______	+1.18	232257	275100	autophagy	unknown
YOR086C	__________	+1.12	1330105	1491665	unknown	unknown
YPL062W	__________	-1.04	145248	140037	unknown	unknown
YPR157W	__________	+1.26	225027	282494	unknown	unknown
YBR134W	__________	+1.12	97223	108618	unknown	unknown
YCR071C	IMG2______	+1.13	262823	295681	mitochondrial DNA maintenance	unknown
YDR006C	SOK1______	+1.16	314958	364260	unknown	suppressor of a cAMP-dependent protein kinase mutant
YDR371W	__________	+1.20	306832	369579	unknown	unknown; similar to chitinases
YGL064C	__________	-1.05	183591	175676	unknown	unknown
YGR171C	MSM1______	+1.00	254776	255093	protein synthesis	tRNA synthetase, mitochondrial, methionyl
YHR188C	__________	-1.17	853714	728151	unknown	unknown
YJL065C	__________	-1.00	460982	460127	unknown	unknown; similar to DNA polymerase epsilon subunit c
YKL062W	MSN4______	+1.21	196877	238689	transcription	transcriptional activator with Snf1p
YLL064C	__________	+1.15	408670	469584	unknown	unknown; similar to members of the PAU1 family
YLR369W	SSQ1______	+1.09	329892	360943	DNA replication (mitochondrial)	mitochondrial HSP70
YMR104C	YPK2______	-1.06	119201	112504	unknown	protein kinase
YNL156C	__________	+1.08	414721	448159	unknown	unknown
YOL062C	APM4______	+1.04	798220	830697	secretion	vesicle coat component
YOR274W	MOD5______	+1.07	250565	267966	tRNA processing	tRNA isopentenyltransferase

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YPL252C	YAH1______	-1.12	833129	744926	unknown	unknown; similar to adrenodoxin and ferrodoxin
YMR319C	FET4______	-1.42	336298	236420	transport	iron transporter
YBL074C	AAR2______	+1.08	105615	113730	mRNA splicing, MATa1	unknown
YDL076C	__________	+1.07	347570	371996	unknown	unknown
YDR203W	__________	+1.20	199666	239032	unknown	unknown
YFL067W	__________	-1.66	574701	345882	unknown	unknown; similar to periodic clock protein
YGR004W	__________	-1.17	216951	185949	unknown	unknown
YHR018C	ARG4______	-1.09	838615	772460	arginine biosynthesis	argininosuccinate lyase
YIL165C	__________	+1.00	231352	232439	unknown	unknown; similar to nitrilases, putative pseudogene
YJR043C	POL32_____	+1.06	373581	397659	DNA replication	polymerase delta 55 kD subunit
YKR040C	__________	+1.32	296345	390771	unknown	unknown
YLR197W	SIK1______	-1.44	6423139	4454347	rRNA processing	nucleolar protein
YMR299C	__________	-1.01	478984	472913	unknown	unknown
YNR019W	ARE2______	-1.01	100154	99009	sterol metabolism	acyl-CoA sterol acyltransferase
YOR098C	NUP1______	-1.35	533996	396166	nuclear protein targeting	nuclear pore protein
YPL074W	YTA6______	-1.20	200079	167177	unknown	unknown; AAA ATPase family
YPR165W	RHO1______	+1.67	2982323	4991803	signaling	GTP-binding protein, rho family
YBR146W	MRPS9_____	-1.06	140903	133244	protein synthesis	ribosomal protein, mitochondrial S9
YCR084C	TUP1______	-1.18	797748	674711	transcription	general repressor
YDR018C	__________	+1.09	101850	110541	unknown	unknown; similar to Ybr042p
YDR383C	__________	+1.26	233994	295127	unknown	unknown
YER080W	__________	+1.08	776523	836610	unknown	unknown
YGL076C	RPL7A_____	-1.42	4231780	2987910	protein synthesis	ribosomal protein L7A
YGR183C	QCR9______	+1.65	622892	1027598	oxidative phosphorylation	ubiquinol cytochrome-c reductase subunit 9
YHR200W	RPN10_____	+1.07	1867372	2007171	protein degradation	26S proteasome subunit
YJL077C	ICS3______	-1.02	354575	347401	Cu2+ ion homeostasis (putative)	unknown
YKL074C	MUD2______	+1.10	239704	262525	mRNA splicing	commitment complex component
YLR009W	__________	-1.24	1880690	1520139	protein synthesis	ribosomal protein L24B (putative)
YLR381W	__________	+1.02	338094	346057	unknown	unknown
YNL168C	__________	-1.02	464791	455753	unknown	unknown; similar to E. coli hpcE gene product which is
YOL074C	__________	+1.05	133438	139747
YOR286W	__________	+1.03	662543	682079	unknown	unknown; similar to Drosophila melanogaster heat shock
YPL262W	FUM1______	+1.05	1407452	1475985	TCA cycle	fumarate hydratase
YBL086C	__________	+1.15	214132	246757	unknown	unknown
YDL088C	ASM4______	+1.16	354213	410412	unknown	unknown; suppresses ts mutations in pol3
YDR211W	GCD6______	-1.07	611026	568620	protein synthesis	translation initiation factor eIF2b subunit
YFR011C	__________	+1.39	385484	535688	unknown	unknown
YGR016W	__________	+1.04	149665	155716	unknown	unknown
YHR029C	__________	+1.11	394162	439315	unknown	unknown; similar to thymidylate synthase in the N-terminal
YIL176C	__________	+1.19	463109	549739	unknown	unknown; similar to members of the PAU1 family
YJR055W	HIT1______	-1.02	198401	194691	unknown	required for growth at high temperature
YKR052C	MRS4______	-1.09	290361	265564	transport	mitochondrial carrier
YLR209C	__________	+1.38	523551	722291	unknown	unknown; similar to human purine nucleoside phosphorylase
YML079W	__________	-1.11	88759	80186	unknown	unknown
YMR309C	NIP1______	-1.37	1421082	1037113	nuclear protein targeting	unknown, similar to NSR1
YNR031C	SSK2______	-1.13	89150	78961	signaling, high osmolarity pathway	MAPKKK (mitogen-activated protein kinase kinase kinase)
YOR110W	TFC7______	-1.02	484663	476151	transcription	TFIIIC subunit
YPL086C	ELP3______	-1.12	90650	80972	chromatin structure	histone acetyltransferase complex subunit
YPR177C	__________	-1.08	92478	85879	unknown	unknown
YBR158W	CST13_____	+1.22	1905872	2325933	Cu2+ ion homeostasis (putative); chromosome stability	unknown; required for optimal growth
YCR095C	__________	+1.03	84019	86635	unknown	unknown
YDR030C	RAD28_____	+1.03	190300	195831	DNA repair	unknown
YDR395W	SXM1______	-1.23	795494	648273	mRNA export; nuclear protein targeting	karyopherin
YER091C	MET6______	-1.36	654612	483009	methionine biosynthesis	homocysteine methyltransferase
YGL088W	__________	-1.10	190529	173918	unknown	unknown; similar to Cyanophora paradoxa ribosomal protein
YGR195W	SKI6______	-1.15	821641	712686	rRNA processing	exoribonuclease
YHR212C	__________	+1.04	163836	171118	unknown	unknown; identical to Yar060p/Raa19p
YJL089W	SIP4______	-1.10	89605	81526	glucose derepression	transcription factor
YKL086W	__________	-1.14	100161	87730	unknown	unknown
YLR021W	__________	+1.03	522694	537793	unknown	unknown
YLR393W	ATP10_____	-1.15	121073	104841	ATP synthesis	F1F0 ATPase complex assembly
YMR127C	SAS2______	-1.04	104061	99624	silencing	zinc-finger protein
YNL180C	RHO5______	+1.50	666578	999626	signaling	Rho family GTPase
YOL086C	ADH1______	-1.08	96116	88741	glycolysis	alcohol dehydrogenase I
YOR298W	__________	-1.31	4360799	3334974	unknown	meiosis (putative)
YPL274W	SAM3______	-1.10	91430	83012	transport, amino acid	high affinity S-adenosylmethionine permease
YAL005C	SSA1______	+1.10	1945562	2134899	ER and mitochondrial translocation	cytosolic HSP70
YBR170C	NPL4______	+1.31	207346	271033	nuclear protein targeting	nuclear pore protein
YCR107W	AAD3______	+1.08	312706	338315	unknown	hypothetical aryl-alcohol dehydrogenase
YDR041W	__________	+1.39	317248	439722	protein synthesis	ribosomal protein, mitochondrial
YDR408C	ADE8______	-1.09	1042643	952661	purine biosynthesis	phosphoribosylglycinamide formyltransferase
YER103W	SSA4______	+1.18	430556	507559	ER and mitochondrial translocation	cytosolic HSP70
YGL101W	__________	-1.04	385948	371948	unknown	unknown
YGR208W	SER2______	-1.25	844453	674679	glycine, serine, and threonine metabolism	phosphoserine phosphatase
YIL005W	__________	+1.07	335092	359197	unknown	unknown; similar to protein disulfide
YJL102W	MEF2______	+1.04	124748	130144	protein synthesis	translation elongation factor, mitochondrial
YKL098W	__________	+1.03	272271	281676	unknown	unknown
YLR034C	SMF3______	+1.05	567233	595242	transport (putative)	metal transporter (putative)
YLR406C	RPL31B____	+1.05	86850	90890	protein synthesis	ribosomal protein L31B
YMR139W	RIM11_____	+1.25	449385	563964	meiosis	protein kinase
YNL193W	__________	-1.55	153433	99232	unknown	unknown
YOL099C	__________	+1.20	334873	403053	unknown	unknown
YOR309C	__________	-1.14	88865	77832	unknown	unknown
YPR004C	__________	-1.17	836222	714260	unknown	unknown; similar to human electron transport flavoprotein
YBL099W	ATP1______	+1.39	1035030	1435754	ATP synthesis	mitochondrial F1F0-ATPase subunit
YCL004W	PGS1______	+1.18	121972	144308	phospholipid metabolism	phosphatidylglycerophosphate synthase
YDL101C	DUN1______	+1.42	253478	358947	DNA repair	DNA damage-responsive protein kinase
YDR224C	HTB1______	+1.27	4931031	6244287	chromatin structure	histone H2B
YEL005C	VAB2______	+1.53	210012	320689	vacuolar protein targeting (putative)	unknown; Vac8p binding protein
YFR024C	__________	+1.21	667632	809693	unknown	unknown
YHR041C	SRB2______	-1.01	294069	290304	transcription	RNA polymerase II mediator subunit
YIR012W	SQT1______	-1.19	861792	722404	ribosome biogenesis (putative)	unknown
YJR068W	RFC2______	-1.07	577823	539482	DNA replication	replication factor C 41 kD subunit
YKR065C	__________	+1.22	630433	770015	unknown	unknown
YLR222C	__________	-1.14	577802	505638	unknown	unknown
YML092C	PRE8______	+1.04	1650186	1723780	protein degradation	20S proteasome subunit Y7 (alpha2
YNL005C	MRP7______	+1.00	655156	655621	protein synthesis	ribosomal protein, mitochondrial large subunit
YNR044W	AGA1______	-1.39	772159	554391	mating	a-agglutinin anchor subunit
YOR123C	LEO1______	-1.15	576918	499555	unknown	unknown
YPL099C	__________	+1.03	326919	335757	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YPR190C	RPC82_____	-1.44	703003	487291	transcription	RNA polymerase III 82 kD subunit
YAL018C	__________	+1.28	101202	129388	unknown	unknown
YBR182C	SMP1______	+1.39	117806	163398	cell wall organization	MADS box transcription factor
YCRX12W	__________	+1.20	117907	141669
YDR053W	__________	+1.08	124635	134519	unknown	unknown
YDR420W	HKR1______	+1.23	86987	107081	cell wall biogenesis (putative)	unknown; cell surface protein
YER115C	SPR6______	+1.20	287991	346371	sporulation	unknown
YGL113W	__________	-1.08	81804	75574	unknown	unknown
YGR220C	MRPL9_____	+1.21	473100	570301	protein synthesis	ribosomal protein, mitochondrial L9
YIL016W	SNL1______	-1.04	673520	648857	nuclear protein targeting	nuclear pore protein (putative)
YJL114W	__________	-1.06	177278	167891	unknown	unknown
YKL110C	KTI12_____	-1.18	504205	427288	killer toxin resistance	unknown
YLR044C	PDC1______	+1.05	15909179	16652841	glycolysis	pyruvate decarboxylase
YLR416C	__________	-1.27	248137	195706	unknown	unknown
YMR151W	YIM2______	-1.13	174824	154694	unknown	unknown
YNL205C	__________	-1.06	171722	162144	unknown	unknown
YOL109W	ZEO1______	-1.07	11192289	10441826	zeocin resistance	unknown
YOR321W	PMT3______	-1.07	518493	483980	protein glycosylation	dolichyl phosphate-D-mannose:protein O-D-mannosyltransferase
YPR016C	TIF6______	-1.30	150777	116137	ribosome biogenesis (putative)	unknown; similar to human translation initiation factor 6 (eIF6)
YBL109W	__________	+1.26	293529	369795	unknown	unknown
YCL017C	NFS1______	+1.16	487475	563046	tRNA splicing	unknown
YDL113C	__________	+1.43	220798	315382	unknown	unknown
YEL017C	PMP2______	-1.07	2286182	2128712	H+ homeostasis	regulates plasma membrane H+-ATPase
YFR034C	PHO4______	-1.07	184954	172868	phosphate signaling	transcription factor
YHR052W	__________	-1.03	1862390	1814339	unknown	unknown
YIR022W	SEC11_____	+1.10	495218	542834	secretion	signal peptidase subunit
YJR080C	__________	+1.07	233596	250954	unknown	unknown; similar to Arg8p
YKR077W	__________	+1.39	236976	330136	unknown	unknown
YLR232W	__________	+1.07	96045	102511	unknown	unknown
YNL017C	__________	-1.06	127688	120617	unknown	unknown
YNR056C	BIO5______	-1.03	159671	155470	biotin biosynthesis	transmembrane regulator of KAPA/DAPA transport
YOR135C	__________	-1.00	395936	395250	unknown	unknown
YPL111W	CAR1______	+1.40	728267	1019627	arginine metabolism	arginase
YPR202W	__________	+1.10	447794	493183	unknown	unknown; similar to other subtelomerically-encoded proteins
YAL029C	MYO4______	+1.12	101724	113691	cell polarity	myosin; asymmetric HO expression
YBR194W	__________	+1.35	191501	258539	unknown	unknown
YDR065W	__________	+1.12	154958	173487	unknown	unknown
YDR432W	NPL3______	-1.16	613385	527938	mRNA export; protein import	nuclear shuttling protein
YER126C	__________	-1.19	353873	297773	unknown	unknown
YGL125W	MET13_____	+1.19	244692	291610	methionine metabolism	methylenetetrahydrofolate reductase, putative
YGR232W	NAS6______	+1.56	384779	600361	protein degradation (putative)	unknown; interacts with 26S proteasome
YIL028W	__________	+1.06	103455	109516	unknown	unknown
YJL126W	NIT2______	+1.04	173732	180058	unknown	nitrilase
YKL122C	SRP21_____	+1.13	669995	758978	secretion	signal recognition particle subunit
YLR056W	ERG3______	-1.14	3192226	2808649	sterol metabolism	C-5 sterol desaturase
YLR426W	__________	-1.09	483335	442990	unknown	unknown; similar to Fox2p, E. coli 3-oxoacyl-[acyl-carrier
YMR161W	HLJ1______	-1.04	138961	134229	unknown	unknown; similar to E. coli DnaJ
YNL217W	__________	+1.04	1104007	1152350	unknown	unknown
YOL121C	RPS19A____	-1.00	15834783	15791186	protein synthesis	ribosomal protein S19A
YOR333C	__________	+1.04	207880	217189	unknown	unknown
YPR028W	YIP2______	-1.07	2809558	2636358	unknown	unknown; interacts with Ypt protein(s)
YBR008C	FLR1______	+1.08	151384	164137	fluconazole resistance	transporter, major facilitator superfamily
YCL029C	BIK1______	+1.02	278009	283429	mating; mitosis	microtubule-associated protein
YDL125C	HNT1______	+1.43	1572199	2252570	unknown	unknown; similar to protein kinase C inhibitor-I
YEL028W	__________	+1.03	172340	177689	unknown	unknown
YFR045W	__________	+1.39	209989	292893	unknown	unknown; similar to mitochondrial carrier family protein Ctp1p
YGR046W	__________	+1.30	275532	359204	unknown	unknown; similar to phage 1C ANTP-139 protein PIR:S46430
YHR063C	__________	+1.23	518039	637010	unknown	unknown; similar to Cbs2p
YIR033W	MGA2______	-1.02	795494	777870	transcription	chromatin remodeling (putative)
YJR093C	FIP1______	+1.08	354192	383585	mRNA polyadenylation	interacts with poly(A) polymerase
YKR089C	__________	-1.28	2836996	2211375	unknown	unknown
YLR244C	MAP1______	-1.33	1368607	1032020	protein processing	methionine aminopeptidase
YML113W	DAT1______	+1.10	1017815	1118228	transcription (putative)	oligo(dA)/oligo(dT)-binding protein
YNL029C	KTR5______	-1.10	291768	264935	protein glycosylation	putative mannosyltransferase
YNR068C	__________	-1.02	132910	130149	unknown	unknown
YOR145C	__________	-1.52	1628590	1073921	unknown	unknown
YPL123C	RNY1______	+1.20	259421	310929	unknown	ribonuclease, T2 family
YAL039C	CYC3______	+1.31	354168	462386	cytochrome c biosynthesis	cytochrome c heme lyase
YBR206W	__________	+1.03	690269	708748	unknown	unknown
YDR077W	SED1______	+3.50	4497564	15755513	unknown	putative cell surface glycoprotein
YDR444W	__________	+1.48	330155	488431	unknown	unknown
YGL137W	SEC27_____	-1.02	175512	171477	secretion	vesicle coat component
YGR244C	LSC2______	+1.87	710650	1327830	TCA cycle	succinyl-CoA ligase
YIL040W	__________	+1.02	437092	444379	unknown	unknown
YJL138C	TIF2______	-1.06	13907085	13148458	protein synthesis	translation initiation factor eIF4A
YKL134C	OCT1______	+1.01	303925	307137	mitochondrial protein targeting	mitochondrial intermediate peptidase
YLR068W	__________	-1.20	457682	381440	unknown	unknown
YLR438W	CAR2______	+1.71	1311959	2241575	arginine metabolism	ornithine aminotransferase
YNL229C	URE2______	+1.17	416065	488190	catabolite repression	inhibitor of Gln3p regulator
YOL133W	HRT1______	-1.05	464422	442510	unknown	unknown; similar to C. elegans protein of unknown function
YPR040W	__________	+1.11	391185	433588	unknown	unknown
YBR018C	GAL7______	-1.02	111645	109757	galactose metabolism	gal-1-phosphate uridyl transferase
YCL041C	__________	-1.01	112048	111251	unknown	unknown; similar to human papilloma virus (HPV) E6 protein
YDL135C	RDI1______	+1.15	866268	999564	signaling	rho GDP dissociation inhibitor for Rho1p
YDR260C	SWM1______	-1.16	225054	194404	sporulation	unknown
YEL040W	UTR2______	+1.20	2584012	3101685	unknown	unknown
YFR057W	__________	-1.13	289728	255986	unknown	unknown
YGR058W	__________	+1.03	263184	271489	unknown	unknown
YHR073W	__________	+1.04	295812	307068	unknown	unknown; similar to human oxysterol-binding protein (OSBP)
YJR104C	SOD1______	-1.06	9782521	9200050	oxidative stress response	copper-zinc superoxide dismutase
YKR101W	SIR1______	-1.11	424698	381707	silencing	reulator of silencing at HML and HMR
YLR256W	HAP1______	+1.05	15861625	16677959	transcription	heme-dependent transcription factor
YNL039W	TFC5______	-1.02	745150	733587	transcription	TFIIIB 90 kD subunit
YOR157C	PUP1______	-1.00	2030129	2023563	protein degradation	20S proteasome subunit (beta2)
YPL135W	ISU1______	+1.43	920637	1313361	iron homeostasis	unknown; similar to iron-sulfur cluster protein nifU
YAL051W	OAF1______	-1.11	111932	100506	peroxisome proliferation	transcriptional activator of POX1
YBR218C	PYC2______	-1.07	1031664	961641	TCA cycle	pyruvate carboxylase 2
YDR089W	__________	-1.10	192358	175303	unknown	unknown
YDR456W	NHX1______	+1.14	476760	542951	transport	Na+/H+ antiporter
YER147C	__________	-1.07	185123	173532	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YGL149W	__________	-1.12	128478	114477	unknown	unknown
YGR256W	GND2______	-1.31	1952417	1491670	pentose phosphate cycle	6-phosphogluconate dehydrogenase
YIL052C	RPL34B____	+1.03	15235623	15637538	protein synthesis	ribosomal protein L34B
YJL150W	__________	-1.07	299647	279281	unknown	unknown
YKL146W	__________	-1.23	425106	346437	unknown	unknown; similar to members of a putative transporter family
YLR080W	__________	+1.17	190631	223459	unknown	unknown
YLR450W	HMG2______	-1.16	726218	627947	sterol metabolism	3-hydroxy-3-methylglutaryl-coenzyme A reductase
YMR183C	SSO2______	-1.15	1462856	1272958	secretion	post-Golgi t-SNARE
YNL241C	ZWF1______	+1.09	1174725	1277660	pentose phosphate cycle	glucose-6-phosphate dehydrogenase
YOL145C	CTR9______	-1.17	1150599	981335	mitosis, chromosome segregation	unknown
YOR355W	GDS1______	-1.12	1185421	1062915	respiration (putative)	unknown; suppresses nam9-1
YPR052C	NHP6A_____	+1.16	760365	883596	chromatin structure	non-histone protein
YBR030W	__________	-1.13	237570	209696	unknown	unknown; similar to Sin3p
YCL053C	__________	-1.22	573424	470920
YDL147W	RPN5______	+1.15	1543454	1780878	protein degradation	26S proteasome subunit
YDR268W	MSW1______	+1.05	285637	298980	protein synthesis	tRNA synthetase, mitochondrial, Trp
YEL052W	AFG1______	+1.22	488265	596549	unknown	unknown; similar to members of the AAA family
YGR070W	ROM1______	-1.01	105293	104009	signaling	GDP/GTP exchange protein for Rho1p
YHR084W	STE12_____	-1.04	372951	360199	mating and pseudohyphal growth	transcription factor
YJR116W	__________	-1.35	370137	273662	unknown	unknown
YLR264W	RPS28B____	+1.06	9488716	10074660	protein synthesis	ribosomal protein S28B
YMR003W	__________	+1.07	341235	364490	unknown	unknown
YNL051W	__________	+1.12	247205	275948	unknown	unknown
YOR169C	__________	-1.23	2598768	2114576	unknown	unknown
YPL147W	PXA1______	-1.16	186396	161363	transport	long-chain fatty acid transporter, ABC family
YBR230C	__________	+1.76	353129	620821	unknown	unknown
YDR099W	BMH2______	+1.14	2738649	3127472	unknown	suppresses clathrin deficiency
YDR468C	TLG1______	+1.34	405184	542348	endocytosis	late Golgi t-SNARE
YER158C	__________	+1.34	191186	255539	unknown	unknown; similar to Afr1p
YGL161C	__________	+1.04	554499	577190	unknown	unknown
YGR268C	__________	+1.12	280429	313970	unknown	unknown
YIL064W	__________	-1.50	982243	656477	unknown	unknown
YJL162C	__________	-1.09	316747	290592	unknown	unknown; similar to E. coli DnaJ and other DnaJ-like
YKL158W	__________	-1.21	117288	96833
YLR092W	SUL2______	-1.01	146121	145032	transport	sulfate permease
YLR462W	__________	-1.01	309435	306659	unknown	unknown
YNL253W	__________	+1.18	305138	359367	unknown	unknown
YOL157C	__________	-1.01	208962	206559	unknown	putative alpha-glucosidase
YOR367W	SCP1______	+1.34	542705	725403	cytoskeleton (putative)	calponin homolog
YPR064W	__________	+1.02	128783	130983	unknown	unknown
YBR042C	__________	+1.17	325148	380133	unknown	unknown
YCL065W	__________	+1.15	521991	600846	unknown	unknown
YDL159W	STE7______	+1.18	256338	302641	signaling, pheromone and pseudohyphal growth pathways	MAPKK (mitogen-activated protein kinase kinase)
YDR280W	RRP45_____	+1.01	625588	630703	rRNA processing	3'->5' exoribonuclease
YEL063C	CAN1______	+1.06	426964	453541	transport	basic amino acid permease
YGR082W	TOM20_____	-1.32	1176807	894452	mitochondrial protein targeting	mito. import receptor
YHR096C	HXT5______	-1.15	661076	573156	transport	hexose permease
YJR128W	__________	-1.05	124487	118916	unknown	unknown
YLR276C	DBP9______	-1.69	1269306	749857	unknown	putative RNA helicase
YMR015C	ERG5______	-1.08	862809	802391	sterol metabolism	C-22 sterol desaturase
YNL061W	NOP2______	-1.48	1264501	857235	nuclear organization	nucleolar protein
YOR181W	LAS17_____	+1.08	378528	410100	cytoskeleton	cortical actin patch component
YPL159C	__________	+1.45	280206	405196	unknown	unknown
YAR010C	__________	+1.02	92558	94787	unknown	unknown
YBR242W	__________	-1.05	447483	427666	unknown	unknown
YDR111C	__________	+1.05	205061	214386	unknown	unknown; similar to alanine aminotransferase (GB:Z48758)
YDR480W	DIG2______	+1.11	215214	238044	invasive growth	negative regulator
YER167W	BCK2______	+1.45	267091	386891	signaling	protein kniase C pathway
YGL173C	KEM1______	-1.33	2692001	2018403	mRNBA decay	DNA and RNA exonuclease
YGR280C	__________	-1.48	1421070	959562	unknown	unknown
YIL073C	SPO22_____	-1.01	241326	239565	sporulation	phospholipase A2, meiosis-specific
YJL174W	KRE9______	+1.21	1116007	1349936	cell wall biogenesis	beta-1,6-glucan assembly
YKL170W	MRPL38____	+1.21	401611	487729	protein synthesis	ribosomal protein, mitochondrial L38
YLR104W	__________	+1.32	254118	335794	unknown	unknown
YMR206W	__________	-1.02	120893	118257	unknown	unknown
YNL265C	IST1______	+1.20	364843	437108	salt tolerance (putative)	unknown; similar to Nuf1p
YOR003W	YSP3______	+1.17	181313	212965	protein degradation	subtilisin-like protease III
YOR379C	__________	-1.16	152060	130578	unknown	unknown
YPR076W	__________	-1.20	193580	160899	unknown	unknown
YBR054W	YRO2______	+1.12	1354319	1523144	unknown	putative heat shock protein
YCLX04W	__________	+1.03	179122	184001
YDL171C	GLT1______	-1.14	1212055	1067643	glutamate biosynthesis	glutamate synthase (NAPDPH) (GOGAT)
YDR292C	SRP101____	-1.01	142105	140213	secretion	signal recognition particle receptor subunit
YEL075C	__________	+1.08	216736	233276	unknown	unknown; similar to other subtelomerically-encoded proteins
YGR094W	VAS1______	-1.04	346964	333250	protein synthesis	tRNA synthetase, valyl
YHR108W	GGA2______	-1.41	1727372	1227055	secretion (putative)	unknown; binds ARF
YJR140C	HIR3______	-1.25	651043	520690	transcription	regulator of histone transcription
YMR027W	HRT2______	+1.25	576227	718402	transposition, Ty3 (putative)	unknown
YNL073W	MSK1______	+1.07	314406	335038	protein synthesis	tRNA synthetase, mitochondrial, lysyl
YPL171C	OYE3______	-1.07	98082	91642	unknown	NAPDH dehydrogenase (old yellow enzyme)
YAR033W	__________	+1.13	227376	255918	unknown	unknown; similar to subtelomerically-encoded proteins
YBR254C	TRS20_____	+1.09	336619	365759	secretion (putative)	transport protein particle (TRAPP) subunit, 20 kD
YDR123C	INO2______	+1.03	174675	179806	phospholipid biosynthesis	transcription factor
YDR492W	__________	-1.25	406329	325344	unknown	unknown
YER178W	PDA1______	-1.19	3583299	3023609	glycolysis	pyruvate dehydrogenase
YGL185C	__________	-1.02	213530	210048	unknown	unknown; similar to D-2-hydroxyacid dehydrogenase
YGR292W	MAL12_____	-1.15	93548	81304	maltose utilization	alpha-glucosidase
YIL084C	SDS3______	-1.18	145634	123713	silencing	(putative) transcriptional regulator
YJL186W	MNN5______	-1.32	1286072	974371	protein glycosylation	alpha-1,2-mannosyltransferase (putative)
YKL182W	FAS1______	-1.16	94206	81534	fatty acid metabolism	fatty-acyl-CoA synthase, beta subunit
YLR116W	MSL5______	-1.22	265358	218073	mRNA splicing	branchpoint bridging protein (commitment complex component)
YMR218C	TRS130____	+1.01	123360	125093	secretion	membrane targeting complex (TRAPP) subunit
YNL277W	MET2______	+1.14	192464	220363	methionine biosynthesis	homoserine O-acetyltransferase
YOR015W	__________	+1.37	549736	753711	unknown	unknown
YOR391C	__________	+1.02	111631	113968	unknown	unknown
YPR088C	SRP54_____	-1.15	1460774	1268786	secretion	signal recognition particle subunit
YBR066C	NRG2______	-1.01	89267	88681	unknown	unknown
YCR004C	YCP4______	+1.39	773306	1073840	unknown	unknown; similar to S. pombe brefeldin A resistance protein
YDL183C	__________	+1.12	200479	223724	unknown	unknown
YDR304C	CYP5______	-1.01	1201462	1193182	protein folding	peptidyl-prolyl cis-trans isomerase

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YGR106C	__________	-1.07	2895937	2710242	unknown	unknown; similar to Vibrio anguillarum chemotaxis methyl
YHR120W	MSH1______	-1.20	220189	184230	DNA repair	MutS homolog; mitochondrial DNA repair
YJR152W	DAL5______	+1.02	208208	211684	allantoin utilization	allantoate permease
YLR299W	ECM38_____	+1.25	194804	243994	glutathione biosynthesis	gamma-glutamyltransferase
YMR038C	LYS7______	-1.01	94805	94115	oxidative stress response	copper chaperone for superoxide dismutase Sod1p
YNL085W	MKT1______	+1.12	958526	1070429	viral propagation	retroviral protease signature protein
YOR203W	__________	+8.61	119295	1026931	unknown	unknown
YPL183C	__________	-1.10	96039	87475	unknown	unknown
YBL005W	TY1A______	-1.54	4737615	3071802	unknown	unknown
YBR266C	__________	-1.11	354650	320248	unknown	unknown
YDL005C	MED2______	+1.24	426747	527058	transcription	RNA polymerase II mediator subunit
YDR135C	YCF1______	+1.03	635242	654496	transport	vacuolar glutathione S-conjugate transporter
YDR504C	__________	+1.91	253700	485004	unknown	unknown
YFL003C	MSH4______	+1.18	106908	125815	meiosis, recombination	MutS homolog
YGL197W	MDS3______	-1.03	89213	86505	meiosis	gene expression regulator (putative)
YHL004W	MRP4______	-1.03	352609	340918	protein synthesis	ribosomal protein, mitochondrial small sunubit
YIL096C	__________	-1.38	391802	284753	unknown	unknown
YJL198W	__________	-1.15	159477	139236	unknown	unknown; similar to Pho87p, member of the phosphate
YKL194C	MST1______	-1.02	92117	90040	protein synthesis	tRNA synthetase, mitochondrial, threonyl
YLR128W	__________	+1.08	173100	186995	unknown	unknown
YML005W	__________	+1.07	260972	280512	unknown	unknown
YNL287W	SEC21_____	-1.20	86540	72107	secretion	vesicle coat component
YOR027W	STI1______	-1.01	1462653	1453315	protein folding	component of Hsp70-Hsp90 complexes
YPL005W	__________	-1.18	87577	73943	unknown	unknown
YPR100W	__________	+1.02	580115	591366	unknown	unknown
YBR078W	ECM33_____	+1.16	2904334	3355000	cell wall biogenesis	unknown
YCR016W	__________	-1.11	467769	423074	unknown	unknown
YDL195W	SEC31_____	+1.20	202018	241942	secretion	vesicle coat component
YDR316W	__________	+1.20	261526	314085	unknown	unknown
YER018C	SPC25_____	+1.29	249628	322432	cytoskeleton	spindle pole body component
YGL005C	__________	+1.33	268169	356820	unknown	unknown; similar to Xenopus kinesin-related protein Eg5
YGR116W	SPT6______	-1.01	403080	399878	transcription	elongation factor
YJL005W	CYR1______	+1.08	15459588	16738064	cell cycle	adenylate cyclase
YKL005C	__________	+1.02	292114	296795	unknown	unknown; similar to Drosophila transcription factor TFIIS,
YLL005C	__________	-1.09	222598	203716	unknown	unknown
YLR311C	__________	+1.13	151160	170934	unknown	unknown
YMR049C	__________	-1.55	466339	300364	unknown	unknown
YNL097C	PHO23_____	-1.01	397815	393521	phosphate signaling	transcriptional regulator of PHO5
YOL005C	RPB11_____	+1.06	1082366	1152273	transcription	RNA polymerase II subunit
YOR215C	__________	+1.13	381510	432857	unknown	unknown
YPL194W	DDC1______	-1.09	150972	138118	cell cycle, checkpoint	unknown
YAR061W	__________	-1.18	130642	110443	unknown	unknown; similar to N-terminus of Flo1p
YBL015W	ACH1______	+1.22	191336	232997	acetyl-CoA metabolism	acetyl-CoA hydrolase
YBR278W	DPB3______	+1.29	180299	232175	DNA replication	polymerase epsilon C subunit
YDL017W	CDC7______	+1.22	193108	235819	cell cycle	S phase protein kinase
YDR147W	EKI1______	+1.27	236462	301392	phospholipid metabolism	ethanolamine kinase
YDR516C	__________	+1.58	279013	441375	unknown	unknown; similar to Glk1p
YFL013C	__________	+1.26	152846	192954	unknown	unknown; similar to Ifh1p and Nab3p
YGL209W	MIG2______	+1.14	90619	103389	glucose repression	transcriptional repressor
YHL013C	__________	-1.02	381876	373722	unknown	unknown
YIL107C	PFK26_____	+1.63	169457	275922	fructose and mannose metabolism	6-Phosphofructose-2-kinase
YJL210W	PEX2______	+1.11	315528	350469	peroxisome biogenesis	integral membrane protein
YKL206C	__________	+1.21	468977	568894	unknown	unknown
YLR140W	__________	+1.14	131817	150524	unknown	unknown
YML014W	__________	-1.42	753848	529257	unknown	unknown; similar to Diptheria toxin resistance protein
YMR242C	RPL20A____	+1.01	14040376	14138019	protein synthesis	ribosomal protein L20A
YNL299W	TRF5______	-1.18	197789	167634	mitosis	related to DNA topoisomerase I
YOR039W	CKB2______	-1.18	799503	676755	salt tolerance	casein kinase II regulatory subunit
YPL017C	__________	-1.31	488770	372905	unknown	unknown; similar to Lpd1p
YPR112C	MRD1______	+1.03	121599	125656	unknown	unknown; similar to Pab1p, Pub1p, Nsr1p, Nop4p and other
YBR089W	__________	+1.28	386696	494868	unknown	unknown
YCR026C	__________	+1.11	187798	207860	unknown	unknown; similar to human plasma membrane glycoprotein PCI
YDL207W	GLE1______	+1.08	333613	360047	mRNA export	unknown
YDR326C	__________	+1.16	116248	135084	unknown	unknown
YER029C	SMB1______	+1.19	346630	411483	mRNA splicing	U1 snRNP protein
YGL017W	ATE1______	+1.13	208286	236097	protein synthesis	tRNA transferase, arginyl
YGR128C	__________	-1.15	350623	304812	unknown	unknown; similar to Haemophilus glutamate-ammonia-ligase
YHR142W	CHS7______	+1.25	1388739	1742776	cell wall biogenesis	ER membrane protein; chitin synthase export
YJL017W	__________	+1.15	169590	194566	unknown	unknown
YKL016C	ATP7______	+1.76	902757	1592012	ATP synthesis	F1F0-ATPase complex, FO D subunit
YLL017W	__________	+1.26	128305	161488	unknown	unknown
YLR322W	__________	-1.06	129421	122256	unknown	unknown
YMR059W	SEN15_____	+1.02	210675	214446	tRNA splicing	splicing endonuclease subunit
YNL109W	__________	-1.01	513718	508213	unknown	unknown
YOL017W	__________	-1.03	206221	200550	unknown	unknown
YOR227W	__________	+1.16	957710	1106165	unknown	unknown
YPL206C	__________	+1.11	778381	866000	unknown	unknown; similar to Mycoplasma genitalium glycerophosphoryl
YBL027W	RPL19B____	+1.08	15349871	16513296	protein synthesis	ribosomal protein L19B
YBR290W	BSD2______	+1.22	524894	642070	transport	Cu(2+) transporter
YDL029W	ARP2______	+1.21	847620	1026716	cytoskeleton	actin-related protein
YDR159W	SAC3______	+1.03	477792	493786	leucine transport	nuclear protein
YDR528W	HLR1______	+1.17	320483	376063	trehalose metabolism (putative)	unknown; pKA antagonist
YFL022C	FRS2______	-1.15	1842931	1597109	protein synthesis	tRNA synthetase, phenylalanyl
YGL221C	NIF3______	+1.04	849588	886309	unknown	unknown
YHL025W	SNF6______	+1.33	2576342	3414330	transcription	component of SWI/SNF global activator complex
YIL119C	RPI1______	+1.03	204901	210276	signaling, Ras pathway	negative regulator of ras-cAMP pathway
YJL222W	VTH2______	+1.01	86513	87452	vacuolar protein targeting	unknown; similar to Vps10p
YKL218C	SRY1______	+1.20	195580	234586	serine metabolism	serine racemase
YLR152C	__________	+1.04	137911	143239	unknown	unknown; similar to Ecm3p
YNL311C	__________	-1.01	283325	281300	unknown	unknown
YOR051C	__________	-1.00	1350367	1345149	unknown	unknown
YPL029W	SUV3______	-1.13	307861	272373	RNA processing, mitochondrial	RNA helicase
YPR124W	CTR1______	-1.32	1658938	1256145	transport	copper transporter
YBR100W	__________	+1.10	208186	228066	unknown	unknown
YCR037C	PHO87_____	-1.08	173741	160356	transport	inorganic phosphate permease
YDL219W	__________	+1.16	481786	560533	unknown	unknown
YDR338C	__________	+1.18	140796	166276	unknown	unknown
YER040W	GLN3______	+1.23	228601	281720	nitrogen catabolite repression	transcription factor
YGL029W	CGR1______	-1.27	679458	533118	unknown	unknown; similar to human chromatin assembly factor I p150
YGR140W	CBF2______	-1.06	85847	81078	mitosis	kinetochore protein complex CBF3, 110 KD subunit

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YHR153C	SPO16_____	+1.07	114553	122222	meiosis, spore formation	unknown
YJL029C	VPS53_____	+1.13	295705	333640	vacuolar protein targeting (putative)	unknown
YKL028W	TFA1______	-1.01	418613	413634	transcription	TFIIE 66 kD subunit
YLL029W	__________	+1.03	76188	78241	unknown	unknown
YLR334C	__________	+1.41	472313	667903	unknown	unknown
YMR071C	__________	-1.01	1029310	1023377	unknown	unknown
YNL121C	TOM70_____	-1.29	838692	648441	mitochondrial protein targeting	outer membrane translocase component
YOL029C	__________	-1.13	644675	569862	unknown	unknown
YOR239W	ABP140____	-1.31	734635	561362	cytoskeleton	F-actin binding protein
YPL218W	SAR1______	-1.06	3856607	3650913	secretion	GTP-binding protein of the ARF family
YER189W	__________	-1.01	202984	201091	unknown	unknown; similar to subtelomerically-encoded proteins
YBL039C	URA7______	-1.73	923121	532302	pyrimidine biosynthesis	CTP synthase 1
YBR302C	COS2______	+1.62	652243	1058088	unknown	unknown; similar to subtelomerically-encoded proteins
YDL041W	__________	-1.00	123232	123079	unknown	unknown
YDR540C	__________	+1.18	143479	168947	unknown	unknown
YGL232W	__________	+1.07	653568	697474	unknown	unknown; similar to dihydropteroate synthase
YHL036W	MUP3______	+1.25	175920	219181	transport	methionine permease
YIL131C	FKH1______	-1.14	98961	86645	unknown	unknown; similar to Drosophila fork head protein
YJR010W	MET3______	+1.14	255946	291696	methionine biosynthesis	sulfate adenylyltransferase
YKR005C	__________	-1.09	141610	130212	unknown	unknown
YLR162W	__________	-1.66	1093376	659837	unknown	unknown
YMR266W	__________	-1.03	215674	210151	unknown	unknown
YNL323W	BRE3______	-1.13	291105	257116	secretion (putative)	unknown; brefeldin A sensitive
YOR063W	RPL3______	-1.01	15954366	15797970	protein synthesis	ribosomal protein L3
YPL041C	__________	-1.28	493543	384711	unknown	unknown
YPR136C	__________	-1.26	256826	204329	unknown	unknown
YBR111C	YSA1______	+1.11	1099650	1224799	unknown	unknown; similar to Drosophila serendipity protein
YCR049C	__________	+1.11	133967	148629	unknown	unknown
YDL231C	BRE4______	+1.09	234043	256097	secretion (putative)	unknown; major facilitator superfamily; brefeldin A sensitive
YDR350C	TCM10_____	+1.22	234485	285922	unknown	unknown
YER050C	__________	+1.24	387364	481400	unknown	unknown
YGL041C	__________	+1.14	289496	330779	unknown	unknown
YGR152C	RSR1______	+1.10	530864	583823	bud site selection	GTP-binding protein, ras superfamily
YHR165C	PRP8______	-1.17	106433	91103	mRNA splicing	U4/U6, U5 snRNP protein
YJL042W	MHP1______	-1.01	127108	125975	cytoskeleton	microtubule-associated protein
YKL039W	PTM1______	+1.07	826674	884373	unknown	unknown; similar to Yhl017p, member of the major facilitator superfamily
YLL041C	SDH2______	+1.25	403310	505883	TCA cycle, oxidative phosphorylation	succinate dehydrogenase
YLR346C	__________	+1.12	147102	164891	unknown	unknown
YMR082C	__________	-1.06	116308	110134	unknown	unknown
YNL133C	__________	+1.13	205957	233632	unknown	unknown
YOL041C	NOP12_____	-1.13	118599	105318	unknown	unknown; nucleolar protein
YOR251C	__________	-1.22	644752	529593	unknown	unknown; similar to thiosulfate sulfurtransferases
YPL230W	USV1______	+1.12	243236	272469	unknown	unknown; expression increases upon starvation
YBL051C	__________	+1.09	533225	579779	unknown	unknown; similar to RNA-binding proteins, contains 1 RRM domain
YDL053C	__________	+1.12	572957	644345	unknown	unknown
YDR180W	SCC2______	+1.04	301184	312301	mitosis, sister chromatid cohesion	unknown; binds chromosomes
YFL044C	__________	-1.10	167584	152462	unknown	unknown
YGL244W	RTF1______	+1.02	450705	461582	transcription	regulator of Spt15 DNA binding properties
YHL047C	TAF1______	-1.05	187816	179173	transport	triacetylfusarinine C transporter
YIL143C	SSL2______	-1.05	227795	216599	transcription; DNA repair	TFIIH helicase
YJR021C	REC107____	+1.04	240431	250240	meiosis, recombination	ds break formation complex subunit
YKR017C	__________	-1.01	172935	171776	unknown	unknown
YLR174W	IDP2______	+1.16	146551	170252	TCA cycle	isocitrate dehydrogenase
YML046W	PRP39_____	-1.08	234189	216569	mRNA splicing	U1 snRNP protein
YMR278W	__________	+1.05	255962	269041	unknown	unknown; similar to phosphomannomutase
YNL335W	__________	+1.20	139041	167470	unknown	unknown; similar to Myrothecium verrucaria cyanamide hydratase
YOR075W	UFE1______	+1.15	309439	355245	secretion	ER membrane t-SNARE
YPL053C	KTR6______	+1.10	612197	675227	protein glycosylation	mannosylphosphate transferase
YPR146C	__________	-1.05	91956	87874	unknown	unknown
YBR123C	TFC1______	+1.04	329196	342018	transcription	TFIIIC 95 kD subunit
YCR061W	__________	-1.06	219457	207956	unknown	unknown
YDL243C	AAD4______	-1.02	210585	206330	unknown	hypothetical aryl-alcohol dehydrogenase
YDR362C	TFC6______	-1.03	249136	241620	transcription	TFIIIC 91 kD subunit
YGL053W	__________	-1.00	379537	377670	unknown	unknown
YHR177W	__________	-1.03	154682	150722	unknown	unknown
YJL054W	TIM54_____	+1.10	104923	114921	mitochondrial protein targeting	inner membrane translocase component
YKL051W	__________	-1.02	468091	457032	unknown	unknown
YLL053C	__________	-1.11	629340	566856	unknown	unknown; similar to putative aquaporin Ypr192p, member of
YLR358C	__________	-1.06	424900	401140	unknown	unknown
YMR093W	__________	-1.16	590483	509673	unknown	unknown
YNL145W	MFA2______	+1.00	105067	105498	mating	a-factor precursor
YOR263C	__________	-1.13	187620	166141	unknown	unknown; similar to adenosine A1 receptors
YPL242C	IQG1______	-1.05	111352	106506	cytoskeleton	IQGAP homolog
YBL063W	KIP1______	+1.07	108795	116880	mitosis, spindle assembly	kinesin related protein
YDL065C	PEX19_____	+1.29	491381	635390	peroxisome biogenesis	unknown
YDR192C	NUP42_____	+1.04	205375	212763	nuclear protein targeting	nuclear pore protein
YFL056C	AAD6______	+1.03	224839	231903	unknown	hypothetical aryl-alcohol dehydrogenase
YGL256W	ADH4______	-1.30	432878	333494	glycolysis	alcohol dehydrogenase IV
YHR007C	ERG11_____	-1.57	2829784	1805799	sterol metabolism	cytochrome P450 lanosterol 14a-demethylase
YIL155C	GUT2______	-1.00	190190	189727	glycerol metabolism	glycerol-3-phosphate dehydrogenase, mitochondrial
YJR032W	CPR7______	-1.22	530688	436387	protein folding	peptidyl-prolyl cis/trans isomerase
YKR029C	__________	+1.14	192099	219650	unknown	unknown; similar to E(z) Enhancer of zeste in the C-terminal
YLR186W	__________	-1.28	1102762	864263	unknown	unknown
YMR290C	HAS1______	-1.61	1766445	1100100	unknown	RNA helicase
YNR008W	LRO1______	-1.06	163624	154380	sterol metabolism (putative)	lecithin cholesterol acyl transferase (putative)
YOR087W	__________	-1.30	200710	154683	unknown	unknown
YPL063W	__________	-1.11	1394089	1256197	unknown	phosphatase
YPR158W	__________	+1.45	366661	531854	unknown	unknown
YBR135W	CKS1______	+1.15	932503	1073808	cell cycle	portein kinase regulator
YCR072C	__________	-1.18	310435	262507	unknown	unknown; similar to nuclear mRNA processing protein Prp4p
YDR007W	TRP1______	+1.02	118164	119984	tryptophan biosynthesis	phosphoribosylanthranilate isomerase
YDR372C	__________	+1.38	336098	463079	unknown	unknown
YER069W	ARG5,6____	+1.18	199925	235792	arginine biosynthesis	acetylglutamate kinase and acetylglutamyl-phosphate reductase
YGL065C	ALG2______	+1.08	257723	278300	protein glycosylation	glycosyltransferase
YGR172C	YIP1______	-1.07	792680	737828	unknown	unknown; interacts with Ypt protein(s)
YHR189W	__________	-1.13	118729	104703	protein synthesis	tRNA hydrolase, peptidyl, putative
YJL066C	__________	+1.33	276146	367417	unknown	unknown
YKL063C	__________	+1.13	604565	685100	unknown	unknown
YLL065W	GIN11_____	+1.00	139883	140374	unknown	growth inhibitor
YLR370C	ARC18_____	+1.44	881644	1267903	cytoskeleton	cortical actin patch integrity; Arp2/3 complex subunit

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YMR105C	PGM2______	+1.56	232494	361546	glycolysis	phosphoglucomutase
YNL157W	__________	+1.45	746621	1083655	unknown	unknown
YOL063C	__________	+1.06	137653	145716	unknown	unknown
YOR275C	__________	+1.06	267848	282796	unknown	unknown
YPL253C	VIK1______	+1.02	269016	274788	nuclear fusion (putative)	Kar3p interactor
YMR320W	__________	+1.13	158231	178247	unknown	unknown
YBL075C	SSA3______	+1.04	271486	283193	ER and mitochondrial translocation	cytosolic HSP70
YDL077C	VAM6______	+1.05	304880	319775	protein degradation	vacuolar carboxypeptidase Y
YDR204W	COQ4______	+1.29	381818	491140	ubiquinone biosynthesis	unknown
YFL068W	__________	-1.12	2183925	1942254	unknown	unknown; similar to other subtelomerically-encoded proteins
YGR005C	TFG2______	+1.00	568942	571455	transcription	TFIIF 54 kD subunit
YHR019C	DED81_____	-1.38	6948988	5021568	protein synthesis	tRNA synthetase, arparaginyl
YIL166C	__________	-1.05	171366	163339	unknown	unknown; major facilitator superfamily
YJR044C	__________	+1.31	622533	817952	unknown	unknown; similar to Drosophila yakuba NADH dehydrogenase
YKR041W	__________	+1.01	127287	128524	unknown	unknown
YLR198C	__________	-1.20	4693371	3895918	unknown	unknown
YML068W	__________	+1.01	364959	368144	unknown	unknown
YMR300C	ADE4______	-1.49	1567188	1049387	purine biosynthesis	amidophosphoribosyltransferase
YNR020C	__________	+1.17	331331	388568	unknown	unknown
YOR099W	KTR1______	-1.01	1893463	1873333	protein glycosylation	mannosyltransferase
YPL075W	GCR1______	-1.04	273857	262567	glycolysis	transcriptional activator
YPR166C	MRP2______	+1.16	463103	537084	protein synthesis	ribosomal protein, mitochondrial S14
YBR147W	__________	-1.00	109067	108918	unknown	unknown
YCR085W	__________	+1.03	110026	113179	unknown	unknown
YDR019C	GCV1______	-1.13	286980	254906	amino acid metabolism	glycine decarboxylase T subunit
YDR384C	__________	-1.64	674794	412253	unknown	unknown; similar to Y. lipolytica Gpr1p
YER081W	SER3______	+1.10	572709	627593	serine biosynthesis	3-phosphoglycerate dehydrogenase
YGL077C	HNM1______	+1.09	638606	696349	transport	choline permease
YGR184C	UBR1______	-1.09	93739	86168	protein degradation, ubiquitin-mediated	ubiquitin-protein ligase
YHR201C	PPX1______	+1.02	968970	992638	unknown	vacuolar exopolyphosphatase
YJL078C	PRY3______	-1.20	96465	80089	unknown	unknown; similar to plant PR-pathogen related proteins
YKL075C	__________	-1.04	247125	237104	unknown	unknown
YLR010C	__________	+1.04	139413	145615	unknown	unknown
YLR382C	NAM2______	+1.00	211764	212518	protein synthesis	tRNA synthetase, mitochondrial, leucyl
YNL169C	PSD1______	-1.12	87450	78263	phospholipid metabolism	phosphatidylserine decarboxylase
YOL075C	__________	-1.07	309755	289460	unknown	putative ATP-dependent transporter
YOR287C	__________	-1.22	324306	265938	unknown	unknown; similar to PITSLRE protein kinase isoforms
YPL263C	KEL3______	-1.28	249414	194889	unknown	unknown; similar to Kel1p and Kel2p
YBL087C	RPL23A____	-1.04	15190657	14588803	protein synthesis	ribosomal protein L23A
YDL089W	__________	+1.22	198630	241524	unknown	unknown
YDR212W	TCP1______	-1.19	1910940	1612335	protein folding	cytoplasmic chaperonin complex
YFR012W	__________	+1.02	144477	146784	unknown	unknown
YGR017W	__________	-1.06	99715	93716	unknown	unknown; similar to Nmd2p
YHR030C	SLT2______	+2.27	1530262	3468341	signaling, PKC1 pathway	MAP kinase (mitogen-activated protein kinase)
YIL177C	__________	-1.16	2154003	1850993	unknown	unknown; similar to subtelomerically-encoded proteins
YJR056C	__________	-1.04	312956	299862	unknown	unknown
YKR053C	YSR3______	+1.02	344076	349350	sphingolipid metabolism	dihydrosphingosine-1-phosphate phosphatase
YLR210W	CLB4______	-1.02	233045	228717	cell cycle	G2/M cyclin
YML080W	__________	-1.05	244912	234047	unknown	unknown; similar to Azospirillum brasilense nifR3
YMR310C	__________	-1.30	560074	432077	unknown	unknown
YNR032W	PPG1______	-1.08	92969	85714	glycogen metabolism	protein phosphatase
YOR111W	__________	-1.01	219013	216020	unknown	unknown
YPL087W	YDC1______	+1.77	494096	872664	sphingolipid metabolism	dihyroceramidase
YPR178W	PRP4______	-1.13	90945	80238	mRNA splicing	U4/U6 snRNP protein
YBR159W	__________	+1.08	1084578	1171682	unknown	unknown; similar to human estradiol
YCR096C	HMRA2_____	+1.45	704106	1020592	unknown	mating type a specific
YDR031W	__________	+1.43	226054	323813	unknown	unknown
YDR396W	__________	+1.26	766045	963738	unknown	unknown
YER092W	__________	+1.44	424501	609165	unknown	unknown
YGL089C	MF(ALPHA)2	-1.29	2592637	2017340	mating	alpha factor
YGR196C	__________	-1.03	278559	270531	unknown	unknown
YHR213W	__________	-1.26	153712	121761	unknown	unknown; similar to the N-terminus of Flo1p
YJL090C	DPB11_____	-1.03	229701	224076	DNA replication	DNA polymerase II complex
YKL087C	CYT2______	-1.05	307755	293376	cytochrome c1 biosynthesis	cytochrome c1 heme lyase
YLR022C	__________	-1.12	657738	588468	unknown	unknown
YLR394W	CST9______	-1.34	89718	66757	meiosis, synapsis	unknown
YMR128W	ECM16_____	-1.08	89843	83125	cell wall biogenesis	unknown
YNL181W	__________	-1.05	515319	489157	unknown	unknown
YOL087C	__________	-1.12	98207	87438	unknown	unknown
YPL275W	__________	-1.08	92649	85522	unknown	unknown; similar to formate dehydrogenases
YAL007C	ERP2______	+1.41	661588	933490	membrane trafficking; secretion (putative)	unknown
YBR171W	SEC66_____	+1.16	466403	542518	secretion	ER protein translocation subcomplex subunit
YCRX01W	__________	+1.20	116522	139910
YDR042C	__________	+1.22	97535	118869	unknown	unknown
YDR409W	__________	+1.02	1669071	1696518	unknown	unknown; similar to Nfi1p
YER104W	RTT105____	+1.21	153918	186543	transposition (putative)	unknown
YGL102C	__________	+1.06	15751859	16618530	unknown	unknown
YGR209C	TRX2______	+1.04	3863492	4004917	DNA replication	thioredoxin II
YIL006W	__________	-1.02	175754	172794	unknown	unknown; similar to Flx1p, Yel006p, and other members of
YJL103C	__________	+1.18	163815	193255	unknown	unknown; similar to transcription factors, has Zn[2]-Cys[6]
YKL099C	__________	-1.27	757671	596655	unknown	unknown; similar to human kinesin heavy chain
YLR035C	MLH2______	+1.01	401522	404650	DNA repair	MutL homolog; mismatch repair; non-Mendelian segregation
YLR407W	__________	-1.08	328316	304042	unknown	unknown
YMR140W	__________	-1.15	263944	230299	unknown	unknown
YNL194C	__________	-1.30	169394	130550	unknown	unknown; similar to Sur7p
YOL100W	PKH2______	+1.04	428315	443587	unknown	protein kinase (ser/thr)
YOR310C	NOP58_____	-1.57	4581807	2914485	ribosome biogenesis	nucleolar protein
YPR005C	HAL1______	-1.03	345083	334887	salt tolerance	unknown
YBL100C	__________	+1.06	188720	200659	unknown	unknown
YCL005W	__________	+1.28	291073	372144	unknown	unknown
YDL102W	CDC2______	+1.21	155026	187896	DNA replication	DNA polymerase delta catalytic 125 KD subunit
YDR225W	HTA1______	+1.13	7082607	8006502	chromatin structure	histone H2A
YEL006W	__________	+1.21	328850	396692	unknown	unknown; similar to Aac1p, Pet9p, Aac3p, Yil006p and other
YFR025C	HIS2______	-1.01	260990	258845	histidine biosynthesis	histidinol phosphatase
YGR028W	MSP1______	+1.55	278486	432804	mitochondrial protein targeting	AAA-ATPase
YHR042W	NCP1______	-1.00	276614	276125	microsomal electron transfer	NADP-cytochrome P450 reductase
YIR013C	GAT4______	+1.06	110046	116398	transcription (putative)	DNA binding protein, GATA family
YJR069C	HAM1______	-1.08	816845	759443	6-N-hydroxylaminopurine resistance	unknown
YKR066C	CCP1______	+1.33	966868	1288821	oxidative stress response	cytochrome-c peroxidase
YLR223C	IFH1______	+1.08	520684	562494	rRNA processing	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YML093W	__________	-1.40	618647	443194	unknown	unknown
YNL006W	LST8______	-1.03	508035	492749	secretion	unknown; post-Golgi
YNR045W	PET494____	-1.22	407832	334046	protein synthesis	translation activator of COX3
YOR124C	UBP2______	+1.01	1377874	1390873	protein degradation, ubiquitin-mediated	ubiquitin-specific protease
YPL100W	__________	+1.15	383601	441121	unknown	unknown; similar to Yfr021p
YPR191W	QCR2______	+1.25	604954	755375	oxidative phosphorylation	ubiquinol--cytochrome-c reductase 40 kD subunit
YAL019W	FUN30_____	+1.09	229541	250951	unknown	unknown; similar to SNF2 transcriptional regulator
YBR183W	YPC1______	+1.69	155025	261220	sphingolipid metabolism	alkaline ceramidase
YCRX13W	__________	+1.41	326926	459373
YDR054C	CDC34_____	+1.41	393111	553527	protein degradation, ubiquitin-mediated	E2 ub.-conjugating enzyme
YDR421W	__________	+1.33	236775	314789	unknown	unknown
YER116C	__________	+1.24	169637	210815	unknown	unknown
YGL114W	__________	-1.01	270453	266973	unknown	unknown; major facilitator superfamily
YGR221C	__________	+1.07	164871	176902	unknown	unknown
YIL017C	VID28_____	+1.11	156462	173180	vacuolar protein targeting (putative)	unknown
YJL115W	ASF1______	+1.10	550847	603240	transcription	anti-silencing protein
YKL111C	__________	+1.11	389454	433845	unknown	unknown
YLR045C	STU2______	+1.09	214968	234841	cytoskeleton	spindle pole body component
YLR417W	VPS36_____	+1.12	301156	338404	vacuolar protein targeting	unknown?
YMR152W	YIM1______	+1.01	563624	566575	protein processing	mitochondrial inner membrane protease
YNL206C	RTT106____	+1.12	375593	420054	transposition	unknown; similar to SSRP proteins (DNA structure-specific
YOL110W	SHR5______	+1.03	208963	214593	protein processing	localization and palmitoylation of Ras proteins
YOR322C	__________	-1.06	370834	349630	unknown	unknown
YPR017C	DSS4______	-1.08	302493	280191	secretion	GDP/GTP exchange factor for Sec4p
YBL110C	__________	+1.18	260795	307583
YCL018W	LEU2______	-1.84	1439172	783476	leucine biosynthesis	beta-isopropyl-malate dehydrogenase
YDL114W	__________	-1.02	132949	130690	unknown	unknown
YEL017W	__________	-1.02	441675	432436	unknown	unknown
YFR035C	__________	+1.46	359227	523754	unknown	unknown
YHR053C	CUP1-1____	+1.05	4565515	4791355	Cu2+ ion homeostasis	metallothionein
YIR023W	DAL81_____	+1.06	103155	109589	transcription	activator of allantoin and urea catabolic genes
YJR082C	__________	+1.16	293730	342001	unknown	unknown
YKR078W	__________	+1.11	193646	214519	unknown	unknown; similar to Uso1p
YLR233C	EST1______	+1.15	130056	148997	telomere length regulation	putative end-binding protein
YML102W	CAC2______	-1.11	436673	394752	chromatin structure	chromatin assembly factor I subunit
YNL018C	__________	-1.16	122246	104961	unknown	unknown; similar to Drosophila melanogaster
YNR057C	BIO4______	+1.16	238319	275910	biotin biosynthesis	dethiobiotin synthetase
YOR136W	IDH2______	+1.39	1563356	2179207	TCA cycle	isocitrate dehydrogenase
YPL112C	__________	+1.05	569041	596417	unknown	unknown
YPR203W	__________	+1.06	233136	246546	unknown	unknown; similar to other subtelomerically-encoded proteins
YAL030W	SNC1______	+1.63	455486	742888	secretion	Golgi v-SNARE
YBR195C	MSI1______	+1.05	259974	274103	chromatin structure	chromatin assembly factor I subunit
YDR066C	__________	+1.25	198050	248077	unknown	unknown; similar to Yer139p
YDR433W	__________	-1.00	130918	130309	unknown	unknown
YER127W	LCP5______	+1.02	552873	565309	rRNA processing, putative	unknown
YGL126W	SCS3______	+1.10	83949	92029	phospholipid metabolism	inositol phospholipid biosynthesis
YGR233C	PHO81_____	+1.15	1053316	1209962	cell cycle	Pho85p kinase inhibitor
YIL029C	__________	+1.36	120887	163956	unknown	unknown
YJL127C	SPT10_____	+1.01	134662	136112	transcription	transcriptional regulator
YKL123W	__________	+1.22	129894	157885	unknown	unknown
YLR057W	__________	+1.10	250464	275980	unknown	unknown
YLR427W	__________	-1.14	269499	236045	unknown	unknown
YMR162C	__________	-1.09	115435	106050	unknown	unknown; similar to members of the Drs2p family of P-type
YNL218W	__________	-1.07	172434	160864	unknown	unknown; similar to E. coli DNA polymerase III gamma and tau
YOL122C	SMF1______	+1.25	375623	469850	transport	high affinity manganese transporter
YOR334W	MRS2______	-1.17	238617	203720	mRNA splicing, mitochondrial	unknown
YPR029C	APL4______	-1.13	1725562	1523190	secretion	AP complex subunit
YBR009C	HHF1______	+1.20	9037420	10856146	chromatin structure	histone H4
YCL030C	HIS4______	-1.21	1175262	967862	histidine biosynthesis	histidinol dehydrogenase
YDL126C	CDC48_____	-1.17	1702892	1459822	ubiquitin mediated degredation	microsomal AAA ATPase family
YDR249C	__________	+1.29	147933	191390	unknown	unknown; similar to cytochromes
YEL029C	__________	+1.01	298108	301745	unknown	unknown; similar to putative Salmonella phosphotransferase
YFR046C	__________	+1.20	241087	289611	unknown	unknown
YGR047C	TFC4______	+1.13	144095	162655	transcription	TFIIIC 131 kD subunit
YIR034C	LYS1______	+1.01	342902	347435	lysine biosynthesis	saccharopine dehydrogenase
YJR094C	IME1______	+1.17	162810	190867	meiosis	transcription factor
YKR090W	__________	+1.24	228382	282254	unknown	unknown
YLR245C	CDD1______	-1.03	129701	125858	pyrimidine metabolism	cytidine deaminase
YML114C	TAF65_____	-1.11	484004	436018	transcription	TFIID subunit
YNL030W	HHF2______	-1.03	12091177	11689475	chromatin structure	histone H4
YNR069C	__________	+1.15	348218	400502	unknown	unknown
YOR146W	__________	-1.57	904582	577202	unknown	unknown
YPL124W	NIP29_____	+1.08	238127	256523	nuclear protein targeting	spindle pole body associated protein
YAL040C	CLN3______	+1.33	471326	625834	cell cycle	G1/S cyclin
YBR207W	FTH1______	+1.21	268224	325889	unknown	unknown; similar to Ftr1p
YDR078C	__________	-1.02	208352	203362	unknown	unknown
YDR445C	__________	+1.05	299388	315346	unknown	unknown
YGL138C	__________	-1.27	107669	84733	unknown	unknown
YGR245C	SDA1______	-1.37	803090	585333	cytoskeleton (putative)	unknown
YIL041W	__________	+1.08	2181782	2360979	unknown	unknown
YJL139C	YUR1______	+1.04	147217	152701	protein glycosylation	mannosyltransferase
YKL135C	APL2______	-1.23	207684	168721	secretion	AP-1 complex subunit
YLR069C	MEF1______	-1.06	343367	323748	protein synthesis	translation elongation factor G, mitochondrial
YLR439W	MRPL4_____	-1.05	418497	398012	protein synthesis	ribosomal protein, mitochondrial L4
YMR173W	DDR48_____	+1.57	2923613	4590151	unknown	induced by DNA damage, heat shock, or osmotic stress
YNL230C	ELA1______	+1.15	297152	340740	transcription (putative)	elongin A homolog
YOL134C	__________	-1.05	358254	342036	unknown	unknown
YOR344C	TYE7______	+1.19	802618	952220	glycolysis	basic h-l-h transcription factor
YPR041W	TIF5______	-1.26	2292664	1824027	protein synthesis	translation initiation factor eIF5
YBR019C	GAL10_____	+1.14	135553	154230	galactose metabolism	UDP-glucose 4-epimerase
YCL042W	__________	+1.14	144539	164419	unknown	unknown
YDL136W	RPL35B____	-1.03	5204527	5035672	protein synthesis	ribosomal protein L35B
YDR261C	EXG2______	+1.51	654537	990130	cell wall biogenesis	exo-beta-1,3-glucanase
YEL041W	__________	+1.02	159483	162183	unknown	unknown; similar to Fre2p
YGR059W	SPR3______	+1.04	122684	127952	sporulation	septin
YHR074W	__________	-1.20	824439	686871	unknown	unknown; similar to Rhodobacter protein adgA and Bacillus subtilis NH3-dependent NAD synthetase (spore outgrowth factor)
YJR105W	__________	-1.45	3554709	2449347	unknown	unknown; similar to ribokinase
YKR102W	FLO10_____	-1.14	79515	69483	unknown	unknown; similar to flocculation protein Flo1p
YML125C	__________	-1.47	2373485	1614087	unknown	unknown; similar to NADH-cytochrome b5 reductase
YNL040W	__________	-1.07	470873	438185	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YOR158W	PET123____	-1.00	509515	506999	protein synthesis	ribosomal protein, mitochondrial small subunit
YPL136W	__________	+1.02	139133	141551	unknown	unknown
YAL053W	__________	+2.23	391634	874463	unknown	unknown
YBR219C	__________	+1.03	342870	354174	unknown	unknown
YDR090C	__________	+1.04	244752	255488	unknown	unknown; similar to Yro2p
YDR457W	TOM1______	+1.03	97301	100706	cell cycle, G2/M	unknown
YER148W	SPT15_____	-1.14	1541241	1354232	transcription	TFIID and TFIIIB subunit
YGL150C	INO80_____	-1.29	172884	133901	unknown	unknown; similar to the Snf2p family of DNA-dependent ATPases
YGR257C	__________	+1.08	519016	561566	unknown	unknown; similar to members of the mitochondrial carrier
YIL053W	RHR2______	-1.25	12541528	10021112	glycerol metabolism	DL-glycerol-3-phosphatase
YJL151C	__________	+1.48	1507552	2229793	unknown	unknown
YKL147C	__________	-1.34	183099	137013	unknown	unknown
YLR081W	GAL2______	-1.15	175995	152986	transport	glucose and galactose permease
YLR451W	LEU3______	-1.01	145426	144136	leucine biosynthesis	transcription factor
YMR184W	__________	+1.69	362479	613866	unknown	unknown
YNL242W	SPO72_____	+1.11	106855	118410	sporulation	unknown
YOL146W	__________	+1.03	402189	413455	unknown	unknown
YOR356W	__________	+1.09	109034	119248	unknown	unknown; similar to human electron transfer flavoprotein-ubiquinone oxidoreductase
YPR053C	__________	-1.06	1444836	1364729	unknown	unknown
YBR031W	RPL4A_____	-1.04	15824513	15265452	protein synthesis	ribosomal protein L4A
YCL054W	SPB1______	-1.02	234475	229847	ribosome biogenesis	rRna methyltransferase (putative)
YDL148C	__________	-1.54	568424	369188	unknown	unknown
YDR269C	__________	+1.06	131375	138814	unknown	unknown
YEL053C	MAK10_____	-1.03	294554	284703	dsRNA virus propagation	unknown
YGR071C	__________	-1.08	183947	170449	unknown	unknown
YHR085W	__________	-1.09	94598	87041	unknown	unknown
YJR117W	STE24_____	+1.10	780111	861020	protein processing	zinc metalloprotease; a-factor precursor processing
YLR265C	__________	+1.13	328371	370345	unknown	unknown
YMR004W	MVP1______	-1.02	399163	393148	vacuolar protein targeting	peripheral Golgi membrane protein
YNL052W	COX5A_____	+1.28	847917	1085743	oxidative phosphorylation	cytochrome-c oxidase subunit Va
YOR170W	__________	+1.03	314856	323451	unknown	unknown
YPL148C	PPT2______	+1.17	173938	202909	lipid transport	phosphopantetheine
YAL064W	__________	+1.05	103974	109383	unknown	unknown
YBR231C	AOR1______	+1.04	247118	257739	osmotic stress response (putative)	unknown
YDR100W	__________	+1.14	456731	521765	unknown	unknown
YDR469W	__________	+1.17	349629	407632	unknown	unknown; similar to C. elegans dpy-30 gene product,
YER159C	BUR6______	+1.57	638648	1001632	transcription	general pol II repressor
YGL162W	SUT1______	-1.07	165535	155321	transport	hypoxic gene family (sterol uptake)
YGR269W	__________	-1.17	104455	89003	unknown	unknown
YIL065C	MDV2______	+1.05	416565	437430	unknown	unknown
YJL163C	__________	+1.06	144368	153133	unknown	unknown; similar to bovine prefoldin subunit 1
YKL159C	RCN1______	+1.30	231602	300388	signaling	unknown; calcineurin regulator
YLR093C	NYV1______	+1.69	710508	1200307	vacuolar protein targeting	vacuolar v-SNARE
YLR463C	__________	+1.11	279844	310089	unknown	unknown; similar to other subtelomerically-coded proteins
YMR195W	ICY1______	-1.04	400511	384749	cytoskeleton (putative)	unknown
YNL254C	__________	-1.07	181241	168845	unknown	unknown
YOL158C	ENB1______	-1.17	482652	411059	transport	enterobactin transporter
YOR368W	RAD17_____	+1.03	305682	315787	cell cycle, checkpoint	3'->5' exonuclease (putative)
YPR065W	ROX1______	-1.06	103190	97105	transcription, oxygen-dependent	transcriptional repressor
YBR043C	__________	-1.01	112664	111928	unknown	major facilitator superfamily
YCL066W	HMLALPHA1_	+1.00	580063	581646	transcription	silenced copy at HML; see YCR040W
YDL160C	DHH1______	+1.01	255575	257833	transcription	RNA helicase
YDR281C	PHM6______	-1.51	256430	169705	phosphate metabolism (putative)	unknown
YEL064C	__________	+1.07	152989	164417	unknown	unknown; similar to members of the major facilitator
YGR083C	GCD2______	-1.21	1039148	862205	protein synthesis	translation initiation factor eIF2B subunit
YHR097C	__________	+1.56	273802	428075	unknown	unknown
YJR129C	__________	-1.21	266407	219451	unknown	unknown
YLR277C	YSH1______	+1.02	337570	342911	mRNA 3'-end processing	cleavage/polyadenylation factor CF II component
YMR016C	SOK2______	-1.08	336365	310733	unknown	unknown; similar to several transcription factors
YNL062C	GCD10_____	-1.26	465323	368267	protein synthesis	translation initiation factor eIF3 RNA-binding subunit
YOR182C	RPS30B____	-1.01	9573190	9486895	protein synthesis	ribosomal protein S30B
YPL160W	CDC60_____	-1.12	203930	182102	protein synthesis	tRNA synthetase, leucyl
YAR014C	__________	-1.29	537008	416474	unknown	unknown
YBR243C	ALG7______	+1.00	415924	416296	protein glycosylation	UDP-N-acetyl-glucosamine-1-P transferase (GPT)
YDR112W	__________	-1.15	117792	101990	unknown	unknown
YDR481C	PHO8______	-1.65	724377	439047	phosphate metabolism	vacuolar alkaline phosphatase
YER168C	CCA1______	-1.15	533245	465272	tRNA processing	tRNA nucleotidyltransferase
YGL174W	__________	+1.02	214446	218216	unknown	unknown
YGR281W	YOR1______	+1.09	552533	601834	transport	ATP-binding cassette (ABC) family
YIL074C	SER33_____	-1.03	1207746	1168151	serine biosynthesis	3-phosphoglycerate dehydrogenase
YJL175W	__________	-1.19	146801	123716	unknown	unknown
YKL171W	__________	+1.07	145218	155213	unknown	putative protein kinase
YLR105C	SEN2______	+1.02	332751	339253	tRNA splicing	splicing endonuclease subunit
YMR207C	HFA1______	-1.08	459973	425078	unknown	unknown; similar to acetyl-coenzyme A carboxylase
YNL266W	__________	+1.20	319232	383711	unknown	unknown; similar to NADH dehydrogenases
YOR004W	__________	-1.45	774602	535146	unknown	unknown
YOR380W	__________	-1.03	215577	210076	unknown	unknown; similar to transcription factors, has Zn[2]-Cys[6]
YPR077C	__________	+1.15	125338	144152	unknown	unknown
YBR055C	PRP6______	-1.00	317293	315775	mRNA splicing	U4/U6 snRNP protein
YCLX05C	__________	+1.05	276677	291110
YDL172C	__________	+1.40	556295	779579	unknown	unknown
YDR293C	SSD1______	+1.29	230443	296660	drug resistance	putative protein phosphatase
YGR095C	RRP46_____	-1.09	583743	533542	rRNA processing	3'->5' exoribonuclease
YHR109W	CTM1______	-1.54	259051	168504	proteim modification	cytochrome c trimethylase
YJR141W	__________	-1.12	282818	252277	unknown	unknown
YLR288C	MEC3______	+1.00	246126	246522	DNA repair; DNA damage checkpoint	activates exonuclease
YMR028W	TAP42_____	+1.12	437313	487604	signaling	associated with protein phosphatases
YNL074C	MLF3______	+1.17	481136	561985	unknown	unknown
YPL172C	COX10_____	-1.18	218820	185259	respiration	cytochrome-c oxidase assembly
YAR035W	YAT1______	+1.06	114169	120579	fatty acid transport	carnitine O-acetyltransferase
YBR255W	__________	+1.01	203491	206225	unknown	unknown
YDR124W	__________	+1.15	186917	214606	unknown	unknown
YDR493W	__________	+1.00	173479	173911	unknown	unknown
YER179W	DMC1______	+1.06	160668	170630	meiosis, chromsome pairing	unknown
YGL186C	__________	-1.17	424798	363928	unknown	unknown; similar to Fcy21p, Fcy2p, Fcy22p
YGR293C	__________	-1.29	179522	139520	unknown	unknown
YIL085C	KTR7______	-1.05	897053	852385	protein glycosylation	putative mannosyltransferase
YJL187C	SWE1______	-1.02	282848	278137	cell cycle	negative regulator of Cdc28p
YKL183W	__________	-1.31	94120	72089	unknown	unknown
YLR117C	CLF1______	-1.07	260455	243035	mRNA splicing; cell cycle (putative)	unknown; synthetic lethal with cdc40

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YMR219W	ESC1______	-1.02	624163	609144	silencing	unknown
YNL278W	__________	-1.09	99386	91347	unknown	unknown
YOR016C	ERP4______	-1.04	97919	93951	membrane trafficking; secretion (putative)	unknown
YOR392W	__________	-1.07	88919	83270	unknown	unknown
YPR089W	__________	-1.16	124939	107942	unknown	unknown
YBR067C	TIP1______	+1.40	1099195	1539283	stress response (putative)	cell wall mannoprotein
YCR005C	CIT2______	+1.18	263334	310780	glyoxylate cycle	peroxisomal citrate synthase
YDL184C	RPL41A____	+1.16	14146923	16432999	protein synthesis	ribosomal protein L41A
YDR305C	HNT2______	-1.02	461090	450165	unknown	histidine triad family
YER008C	SEC3______	-1.00	1558193	1555679	secretion	exocyst complex subunit
YGR107W	__________	+1.29	354771	459261	unknown	unknown
YHR121W	__________	-1.03	1121019	1093266	unknown	unknown
YJR153W	PGU1______	-1.20	207974	172884	unknown	endo-polygalacturonase
YLR300W	EXG1______	+1.80	5041068	9092476	cell wall biogenesis	exo-beta-1,3-glucanase
YMR039C	SUB1______	-1.14	96993	84814	transcription	transcriptional coactivator
YNL086W	__________	+1.06	166530	175740	unknown	unknown
YOR204W	DED1______	-1.08	95661	88918	RNA processing	ATP-dependent RNA helicase
YBL005W	TY1B______	+1.23	87131	107129	unknown	unknown
YBR267W	__________	-1.04	464462	446279	unknown	unknown
YDL006W	PTC1______	+1.48	380219	563130	tRNA splicing	protein phosphatase
YDR136C	__________	+1.18	97107	114585	unknown	unknown
YDR505C	PSP1______	+1.27	120009	152028	unknown	unknown; overexpression suppresses mutation in pol3
YFL004W	PHM1______	-1.19	754993	634553	phosphate metabolism (putative)	polyphosphate synthetase (putative)
YGL198W	__________	+1.19	403616	478908	unknown	unknown; similar to NADH-ubiquinone oxidoreductase chain 2
YHL005C	__________	-1.01	112811	111416	unknown	unknown
YIL097W	__________	+1.18	161905	190360	unknown	unknown
YJL199C	__________	+1.22	126706	154277	unknown	unknown
YKL195W	__________	+1.04	88111	91690	unknown	unknown
YLR129W	DIP2______	-1.30	604565	466134	unknown	interacts with Dom3p
YML006C	GIS4______	+1.01	404381	406595	unknown	unknown
YMR231W	PEP5______	-1.06	279156	263699	vacuole biogenesis	unknown; vacuolar peripheral membrane protein
YNL288W	__________	-1.01	465869	462953	unknown	unknown
YOR028C	CIN5______	-1.18	193393	163542	salt tolerance	basic leu zipper transcription factor
YPL006W	NCR1______	-1.17	101523	86857	sterol metabolism (putative)	unknown
YPR101W	SNT309____	+1.13	312327	351658	mRNA splicing	spliceosome-associated protein
YBR079C	RPG1______	-1.40	1816372	1297714	protein synthesis	translation initiation factor eIF3
YCR017C	__________	+1.07	133878	143726	unknown	unknown
YDL196W	__________	+1.18	140793	166296	unknown	unknown
YER019W	__________	+1.02	1698818	1729442	unknown	unknown; similar to mammalian neutral
YGL006W	PMC1______	+1.40	446057	625402	transport	vacuolar Ca(2+)-ATPase
YGR117C	__________	+1.04	388487	405118	unknown	unknown
YHR132C	ECM14_____	-1.25	721879	578716	cell wall biogenesis	unknown
YJL006C	CTK2______	+1.05	198578	208008	transcription	cyclin-like
YKL006C	SFT1______	+1.20	335591	402727	secretion	intra-Golgi v-SNARE
YLL006W	MMM1______	-1.01	219492	216809	mitochondrial biogenesis	(putative) component of actin binding protein complex
YLR312C	__________	+1.05	89559	93805	unknown	unknown
YNL098C	RAS2______	-1.27	1621175	1273037	signaling, Ras pathway	GTP-binding protein, ras homolog
YOL006C	TOP1______	-1.02	302375	297539	DNA replication	topoisomerase I
YOR216C	RUD3______	-1.13	602191	532810	secretion (putative)	unknown; suppresses uso1-1
YPL195W	APL5______	-1.12	212983	190109	vacuolar protein targeting	AP-3 complex subunit
YAR062W	__________	-1.28	174241	136184	unknown	unknown; similar to the N-terminus of Flo1p, identical to Yhr213p
YBL016W	FUS3______	-1.12	288298	258262	mating (cell cycle arrest)	protein kinase
YBR279W	PAF1______	+1.15	372784	430055	transcription	RNA polymerase II-associated protein
YDL018C	ERP3______	+1.33	303346	402947	membrane trafficking; secretion (putative)	unknown
YDR148C	KGD2______	+1.20	414879	496353	TCA cycle	2-oxoglutarate dehydrogenase
YDR517W	GRH1______	+1.33	420276	558162	unknown	unknown; homolog of mammalian Golgi protein GRASP65
YGL210W	YPT32_____	+1.14	492721	561354	secretion	ras-like GTPase
YHL014C	YLF2______	+1.14	233275	265619	unknown	unknown; similar to B. subtilis GTP-binding protein and human glycogen phosphorylases
YIL108W	__________	+1.56	265517	413755	unknown	unknown
YJL211C	__________	+1.18	122533	144539	unknown	unknown
YKL207W	__________	-1.13	917620	814181	unknown	unknown
YLR141W	RRN5______	+1.01	224856	226328	transcription	component of upstream activation factor complex (UAF)
YML015C	TAF40_____	-1.13	353111	312328	transcription	TFIID 40 kD subunit
YMR243C	ZRC1______	-1.52	2059263	1358265	zinc and cadmium ion homeostasis	unknown
YNL300W	__________	-1.08	693690	641627	unknown	unknown; similar to Mid2p
YOR040W	GLO4______	-1.52	254037	167045	methylglyoxal resistance	glyoxalase II
YPL018W	CTF19_____	-1.34	224272	167259	mitosis, chromosome segregation	kinetochore protein
YPR113W	PIS1______	+1.01	2075729	2089005	phospholipid metabolism	phosphatidylinositol synthase
YBR090C	NHP6B_____	+1.61	641883	1030710
YCR027C	RSG1______	+1.17	164560	192373	unknown	GTP-binding protein, ras family
YDL208W	NHP2______	-1.16	1941662	1667263	unknown	unknown; similar to high mobility group proteins
YDR327W	__________	+1.23	875157	1079757	unknown	unknown
YER030W	__________	+1.15	760500	871116	unknown	unknown
YGL018C	JAC1______	+1.17	217263	254083	protein folding	chaperonin; E. coli Hsc20 homolog
YGR129W	SYF2______	+1.01	204914	206765	cell cycle (putative)	unknown; synthetic lethal with cdc40
YHR143W	RPC10_____	-1.03	3187022	3092921	transcription	shared subunit of RNA polymerase I,II, and III
YJL018W	__________	-1.01	132911	132126	unknown	unknown
YKL017C	HCS1______	+1.23	183260	224868	DNA replication	DNA helicase A
YLL018C	DPS1______	-1.34	3692674	2758871	protein synthesis	tRNA synthetase, aspartyl
YLR323C	__________	+1.07	200396	215149	unknown	unknown
YNL110C	__________	-1.46	657301	451686	unknown	unknown
YOL018C	TLG2______	-1.05	357990	342222	endocytosis	trans-Golgi network t-SNARE
YOR228C	__________	-1.01	138481	136511	unknown	unknown
YPL207W	__________	-1.51	638121	422503	unknown	unknown
YBL028C	__________	-1.21	720583	597620	unknown	unknown
YBR291C	CTP1______	+1.45	212347	307589	transport	mitochondrial citrate transporter
YDL030W	PRP9______	+1.26	225893	285396	mRNA splicing	U2 snRNP activation
YDR160W	SSY1______	+1.20	154326	185959	transport	regulator of transporters
YDR529C	QCR7______	+1.88	636129	1193758	respiration	cytochrome-c reductase subunit
YFL023W	__________	+1.11	130109	143961	unknown	unknown
YGL222C	EDC1______	+1.25	95927	119799	mRNA processing	unknown; genetic interactiosn with dcp1-2
YHL026C	__________	+1.12	2351555	2624714	unknown	unknown
YIL120W	QDR1______	+1.11	146811	163186	drug resistance (putative)	unknown; major facilitator superfamily
YJL223C	PAU1______	+1.37	221037	302079	unknown	unknown; similar to members of the Srp1p/Tip1p family
YKL219W	COS9______	+1.53	257378	393087	unknown	unknown; similar to subtelomerically-encoded proteins
YLR153C	ACS2______	-1.17	1144739	981952	acetyl-CoA biosynthesis	acetyl-coenzyme A synthetase
YML027W	YOX1______	+1.21	286057	346749	unknown	binds leu-tRNA gene
YMR255W	GFD1______	-1.07	286448	268719	RNA processing (putative)	unknown; affects DEAD box protein activity
YNL312W	RFA2______	-1.10	637259	580920	DNA replication	replication factor A 36 kD subunit
YOR052C	__________	+1.21	201093	243401	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YPL030W	__________	-1.26	479729	382051	unknown	unknown
YPR125W	__________	-1.46	2764348	1888117	unknown	suppresses mrs2-1
YBR101C	__________	+1.61	741597	1193746	unknown	unknown; similar to Ypt/Rab interacting protein
YCR038C	BUD5______	+1.21	145243	176145	bud site selection	GDP/GTP exchange factor for Rsr1p/Bud1p
YDL220C	CDC13_____	+1.14	112563	127810	cell cycle, G2/M	telomere binding protein
YDR339C	__________	+1.16	592482	687222	unknown	unknown
YER041W	__________	+1.03	159621	164843	unknown	unknown; similar to DNA repair protein Rad2p
YGL030W	RPL30_____	-1.14	2041753	1783844	protein synthesis	ribosomal protein L30
YGR141W	__________	+1.23	250646	309427	unknown	unknown
YHR154W	ESC4______	+1.13	129490	146305	silencing	unknown
YJL030W	MAD2______	+1.34	291624	390766	mitosis	unknown; spindle-assembly checkpoint
YKL029C	MAE1______	-2.11	555746	263869	pyruvate metabolism	mitochondrial malic enzyme
YLL030C	__________	-1.02	87806	85853	unknown	unknown; similar to Ca++-transporting ATPase
YLR335W	NUP2______	+1.05	702079	734528	nuclear protein targeting	nuclear pore protein
YMR072W	ABF2______	+1.23	1313910	1613819	mitochondrial genome maintenance	(putative) HMG transcription factors
YNL122C	__________	+1.02	313792	321604	unknown	unknown
YOL030W	__________	+1.28	1683201	2151275	unknown	unknown; similar to Gas1p
YOR240W	__________	-1.18	899983	760634
YPL219W	PCL8______	+1.02	230896	235279	cell cycle	cyclin (Pho85p)
YER190W	YRF1-2____	-1.03	116736	113437	unknown	Y' helicase (subtelomerically-encoded)
YBL040C	ERD2______	+1.39	345300	479252	ER protein retention	HDEL receptor
YDL042C	SIR2______	-1.02	102151	99716	silencing	reulator of silencing at HML, HMR, telomeres
YDR541C	__________	+1.12	200535	225188	unknown	unknown; similar to dihydroflavonol-4-reductases
YGL233W	SEC15_____	-1.02	358813	350784	secretion	exocyst complex subunit
YHL037C	__________	-1.08	97296	89973	unknown	unknown
YIL132C	__________	-1.15	143347	124278	unknown	unknown
YJR010C	SPC1______	+1.07	270374	288165	secretion	signal peptidase subunit
YKR006C	MRPL13____	-1.06	527939	496308	protein synthesis	ribosomal protein, mitochondrial L13
YLR163C	MAS1______	-1.12	467023	415495	protein processing	mitochondrial processing protease subunit
YML037C	__________	+1.09	114598	124476	unknown	unknown
YMR267W	PPA2______	+1.09	190878	208579	oxidative phosphorylation	inorganic pyrophosphatase, mitochondrial
YNL324W	__________	+1.05	127886	133772	unknown	unknown
YOR064C	YNG1______	+1.03	338372	347830	chromatin structure	histone acetyltransferase complex subunit
YPL042C	SSN3______	-1.11	273505	245363	transcription	RNA polymerase II mediator subunit
YPR137W	RRP9______	-1.34	679023	507737	rRNA processing	U3 snRNP protein
YBR112C	CYC8______	+1.08	104492	112406	transcription	general repressor
YCR050C	__________	+1.06	263983	279798	mitochondrial function (putative)	unknown
YDL232W	OST4______	+1.08	173521	188173	protein glycosylation	oligosaccharyltransferase complex assembly
YDR351W	SBE2______	+1.36	290009	394438	bud growth	unknown
YER051W	__________	+1.21	192161	232867	unknown	unknown
YGL042C	__________	+1.11	688467	762845	unknown	unknown; similar to rat Na+/Ca++ exchanger NCX2 PIR:A54139
YGR153W	__________	+1.39	183924	255083	unknown	unknown
YHR166C	CDC23_____	+1.13	232362	261750	mitosis	anaphase promoting complex subunit
YJL043W	__________	-1.13	126937	111886	unknown	unknown
YKL040C	NFU1______	+1.15	636420	732679	iron homeostasis	unknown; similar to Anabaena nitrogen fixing protein nifU
YLL042C	APG10_____	+1.02	131925	134239	autophagy	unknown; protein conjugating enzyme (putative)
YLR347C	KAP95_____	-1.55	359656	231809	nuclear protein targeting	beta-karyopherin
YMR083W	ADH3______	-1.64	10428638	6367594	glycolysis	alcohol dehydrogenase III, mitochondrial
YNL134C	__________	-1.22	1484170	1213582	unknown	unknown; similar to C. carbonum toxD gene
YOL042W	__________	+1.10	307518	338554	unknown	unknown; similar to Ccr4p
YOR252W	__________	-1.29	590776	458084	unknown	unknown
YPL231W	FAS2______	-1.04	135154	129455	fatty acid metabolism	fatty-acyl-CoA synthase, alpha subunit
YBL052C	SAS3______	+1.03	231353	238039	silencing	unknown
YDL054C	__________	+1.02	182897	186364	unknown	unknown
YDR181C	SAS4______	+1.12	222282	248377	silencing	unknown
YFL045C	SEC53_____	+1.19	2753104	3272829	protein glycosylation	phosphomannomutase
YGL245W	__________	-1.36	5490825	4030894	protein synthesis	tRNA synthetase, glutamyl
YHL048W	COS8______	+1.39	586730	812907	unknown	unknown; similar to subtelomerically-encoded proteins
YIL144W	TID3______	+1.16	286178	331227	cytoskeleton	spindle pole body component
YJR022W	LSM8______	+1.11	185151	205020	mRNA splicing	snRNP protein (putative)
YKR018C	__________	-1.21	483399	398185	unknown	unknown
YLR175W	CBF5______	-1.44	4738562	3301874	mitosis	centromeric microtubule binding protein
YML047C	__________	-1.07	138079	129353	unknown	unknown
YMR279C	__________	+1.09	229727	249525	unknown	major facilitator superfamily
YNL336W	COS1______	+1.07	115066	123691	unknown	unknown; similar to subtelomerically-encoded proteins
YOR076C	__________	-1.03	340546	330489	unknown	unknown
YPL054W	LEE1______	+1.32	150521	198462	unknown	unknown
YPR147C	__________	+1.01	149721	151694	unknown	unknown
YBR124W	__________	-1.05	109970	104640	unknown	unknown
YCR062W	__________	+1.04	237475	248014	unknown	unknown
YDL244W	THI13_____	+1.07	172705	183995	unknown	unknown; similar to Thi5p, Thi11p, and Thi12p
YDR363W	ESC2______	-1.13	159226	140955	silencing	unknown
YER061C	CEM1______	-1.31	221859	169624	fatty acid metabolism	beta-keto-acyl-ACP synthase, mitochondrial
YGL054C	ERV14_____	-1.06	1177627	1115017	polarized growth (putative)	unknown; ER-derived vesicle protein
YHR178W	STB5______	-1.16	166402	143141	transcription	unknown; binds Sin3p
YJL055W	__________	+1.10	1239706	1360431	unknown	unknown
YKL052C	__________	+1.17	437741	510353	unknown	unknown
YLL054C	__________	-1.13	92828	81870	unknown	unknown; similar to transcription factors, has Zn[2]-Cys[6]
YLR359W	ADE13_____	-1.63	5494068	3379167	purine biosynthesis	adenylosuccinate lyase
YMR094W	CTF13_____	-1.01	164948	162891	mitosis	kinetochore protein complex subunit
YNL146W	__________	+1.05	126304	132513	unknown	unknown
YOL053C	__________	+1.79	159158	284282
YOR264W	__________	+1.16	525253	608166	unknown	unknown
YPL243W	SRP68_____	-1.08	1318200	1219966	secretion	signal recognition particle subunit
YBL064C	__________	+1.43	372957	532496	unknown	unknown; similar to Tsa1p
YDL066W	IDP1______	+1.10	247002	272468	TCA cycle	isocitrate dehydrogenase (NADP+)
YDR193W	__________	-1.02	118764	116461	unknown	unknown
YFL057C	__________	+1.04	99840	103991	unknown	putative aryl-alcohol reductase
YGL257C	MNT2______	+1.03	374394	386969	protein glycosylation	mannosyltransferase
YHR008C	SOD2______	-1.12	88363	78837	oxidative stress response	Manganese superoxide dismutase
YIL156W	UBP7______	-1.02	203961	199539	protein degradation, ubiquitin-mediated	ubiquitin-specific protease
YJR033C	RAV1______	-1.16	696801	602864	vacuolar acidification (putative)	unknown; regulates V-ATPase
YKR030W	__________	+1.02	484682	494835	unknown	unknown
YLR187W	__________	+1.06	143838	152208	unknown	unknown
YML057W	CMP2______	+1.46	562521	822576	signaling	calcineurin catalytic A subunit
YNR009W	__________	+1.06	352386	373292	unknown	unknown
YOR088W	__________	+1.15	477131	547890	unknown	unknown
YPL064C	__________	+1.12	469882	524688	unknown	unknown
YBR136W	MEC1______	+1.05	96427	100954	DNA repair and recombination	PI kinase homolog
YCR073C	SSK22_____	+1.05	158906	166657	signaling, high osmolarity pathway	MAPKKK (mitogen-activated protein kinase kinase kinase)

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YDR008C	__________	+1.08	117632	127577	unknown	unknown
YDR373W	FRQ1______	+1.12	638100	713529	unknown	unknown; similar to human BDR-1 protein and other calcium
YER070W	RNR1______	-1.00	882885	879727	DNA replication	ribonucleotide reductase
YGL066W	__________	-1.08	119929	111367	unknown	unknown; similar to Dictyostelium discoideum G-box-binding
YGR173W	__________	-1.36	1273968	937763	unknown	unknown; similar to human GTP-binding protein PIR:A55014
YHR190W	ERG9______	-1.10	1272457	1158983	sterol metabloism	squalene synthetase
YJL067W	__________	+1.46	267849	391032	unknown	unknown
YKL064W	MNR2______	+1.15	161119	184647	manganese resistance	unknown
YLL066C	__________	-1.07	86027	80721	unknown	unknown; similar to other subtelomerically-encoded proteins
YLR371W	ROM2______	-1.16	985962	848613	signaling	GDP/GTP exchange factor for Rho1p
YMR106C	YKU80_____	+1.03	204229	211162	DNA repair	DNA binding; Ku80 homolog
YNL158W	__________	-1.05	291964	277880	unknown	unknown
YOL064C	MET22_____	-1.02	609200	596769	methionine biosynthesis	3'(2')5'-bisphosphate nucleotidase
YOR276W	CAF20_____	-1.07	2314002	2158692	protein synthesis	mRNA cap-binding protein (eIF4F) 20K subunit
YPL254W	HFI1______	-1.07	493415	459202	transcription	Ada/Gcn5 protein complex
YMR321C	__________	-1.11	1814820	1639007	unknown	unknown
YBL076C	ILS1______	-1.22	619940	509937	protein synthesis	tRNA synthetase, isoleucyl
YDL078C	MDH3______	+1.17	980940	1143754	TCA cycle	malate dehydrogenase
YDR205W	__________	+1.09	206945	226466	unknown	unknown; similar to Cot1p
YFR001W	LOC1______	+1.00	700234	701388	mRNA localization	dsRNA binding protein
YGR006W	PRP18_____	-1.10	135729	123601	mRNA splicing	U5 snRNP protein
YHR020W	__________	-1.68	2213525	1320779	unknown	unknown; similar to prolyl-tRNA synthetases, putative class
YIL167W	__________	+1.04	208307	215851	gluconeogenesis	serine dehydratase
YJR045C	SSC1______	-1.36	3286489	2417369	mitochondrial protein targeting	HSP70 family, chaperonin and import motor
YKR042W	UTH1______	-1.73	8109425	4687524	aging	unknown
YLR199C	__________	+1.17	549464	640129	unknown	unknown
YML069W	POB3______	+1.07	732940	787127	DNA replication (putative)	binds DNA polymerase delta
YMR301C	ATM1______	-1.16	540607	464826	transport	regulator of mit. iron transporter
YNR021W	__________	-1.11	2231974	2013724	unknown	unknown
YOR100C	CRC1______	-1.01	133903	133040	transport	mitochondrial carnitine carrier
YPL076W	GPI2______	-1.03	259163	251136	protein processing	N-acetylglucosaminylphosphatidylinositol synthesis
YPR167C	MET16_____	+1.32	216221	286229	sulfate assimilation	3'-phosphoadenylylsulfate reductase
YBR148W	YSW1______	+1.06	157863	167218	unknown	spore specific
YCR086W	__________	+1.17	252536	294463	unknown	unknown
YDR020C	__________	-1.10	165492	150637	unknown	unknown; similar to uridine kinases and phosphoribulokinases
YDR385W	EFT2______	-1.15	10249603	8944845	protein synthesis	translation elongation factor eEF2
YER082C	__________	-1.08	623217	578538	unknown	unknown
YGL078C	DBP3______	-1.39	1163887	839916	rRNA processing	RNA helicase
YGR185C	TYS1______	-1.21	2979265	2466636	protein synthesis	tRNA synthetase, tyrosyl
YHR202W	__________	-1.05	231028	219112	unknown	unknown
YJL079C	PRY1______	+1.38	759858	1050015	unknown	unknown; similar to plant PR-pathogen related proteins
YKL076C	__________	+1.11	305898	340559	unknown	unknown
YLR011W	__________	+1.08	249020	268827	unknown	unknown; similar to E. coli 20.4 KD protein of unknown function
YLR383W	RHC18_____	-1.08	105104	97413	DNA repair, recombination	unknown
YMR118C	__________	+1.03	186724	191963	unknown	unknown; similar to Sdh3p
YNL170W	__________	+1.15	516429	595112	unknown	unknown
YOL076W	MDM20_____	-1.12	460276	410568	mitochondrial inheritance; actin assembly	transmembrane protein
YOR288C	MPD1______	-1.03	227410	220800	protein folding (putative)	related to protein disulfide isomerases
YPL264C	__________	+1.01	159305	160162	unknown	major facilitator superfamily
YBL088C	TEL1______	-1.00	99096	98749	telomere length regulation	putative phosphatidylinositol kinase
YDL090C	RAM1______	+1.06	261366	276179	protein processing	farnesyltransferase
YDR213W	UPC2______	+1.05	152016	158861	unknown	unknown; similar to transcription factors, has Zn[2]-Cys[6]
YFR013W	IOC3______	+1.09	334168	363429	unknown	unknown
YGR018C	__________	-1.05	661970	627975	unknown	unknown
YHR031C	RRM3______	-1.19	212467	178564	transposition; rDNA replication	DNA helicase
YIR001C	SGN1______	+1.03	446435	461049	unknown; growth on ethanol and glycerol	unknown
YJR057W	CDC8______	-3.44	1132198	328694	DNA replication	thymidylate kinase
YKR054C	DYN1______	-1.46	131321	89773	cytoskeleton	dynein heavy chain
YLR211C	__________	-1.02	135356	132915	unknown	unknown
YML081W	__________	-1.19	1140103	956335	unknown	unknown
YMR311C	GLC8______	+1.13	892813	1007334	mitosis, chromosome segregation	unknown; regulates Glc7p
YNR033W	ABZ1______	-1.09	586694	539481	PABA biosynthesis	para-aminobenzoate synthase
YOR112W	__________	-1.04	332982	321017	unknown	unknown
YPL088W	__________	+3.55	323461	1146855	unknown	unknown; similar to Agrobacterium tumefaciens MocA protein
YPR179C	PLO1______	-1.01	95740	94961	unknown; ploidy-related	unknown; similar to C-terminal region of Nip80p
YBR160W	CDC28_____	+1.54	542980	838324	cell cycle	cyclin dependent protein kinase
YCR097W	HMRA1_____	+1.16	161021	186163
YDR032C	PST2______	+1.37	1636843	2249642	unknown	unknown; similar to Ycp4p and S. pombe OBR1 brefeldin A; secreted by regenerating protoplasts
YDR397C	NCB2______	+1.16	814337	947648	transcription	negative regulator of RNA polymerase II
YER093C	__________	-1.08	2784836	2586397	unknown	unknown
YGL090W	LIF1______	+1.09	448284	486392	DNA replication (putative)	interacts with DNA ligase
YGR197C	SNG1______	-1.06	282415	265721	nitrosoguanidine resistance	unknown
YHR214W	__________	-1.46	343136	235490	unknown	unknown
YJL091C	__________	-1.13	322527	285369	unknown	unknown; similar to Can1p
YKL088W	__________	-1.27	316393	249125	unknown	unknown; similar to Sis2p
YLR023C	__________	-1.11	419669	377966	unknown	unknown
YLR395C	COX8______	+1.31	612505	802081	oxidative phosphorylation	cytochrome-c oxidase chain VIII
YMR129W	POM152____	-1.10	95626	86863	nuclear protein targeting	nuclear pore protein
YNL182C	__________	-1.47	637779	434702	unknown	unknown
YOL088C	MPD2______	-1.09	90022	82893	unknown	putative protein disulfide isomerase
YOR299W	BUD7______	-1.08	92165	85578	bud site selection, bipolar	unknown
YPL276W	__________	-1.07	91712	85401	unknown	unknown; similar to formate dehydrogenases
YAL008W	FUN14_____	+1.60	172787	276233	unknown	unknown
YBR172C	SMY2______	+1.03	609284	629325	unknown	kinesin related
YCRX02C	__________	+1.13	98669	111635
YDR043C	NRG1______	+1.33	157473	209163	unknown	unknown; suppresses snf mutation(s)
YDR410C	STE14_____	+1.01	367027	368932	mating	a-factor farnesyltransferase
YER105C	NUP157____	+1.12	1137039	1268839	nuclear protein targeting	nuclear pore protein
YGL103W	RPL28_____	+1.07	14913835	15943223	protein synthesis	ribosomal protein L28
YGR210C	__________	-1.08	1134269	1048001	unknown	unknown
YIL007C	__________	+1.09	937153	1023956	unknown	unknown
YJL104W	__________	-1.14	683615	600856	unknown	unknown
YKL100C	__________	-1.12	366831	326580	unknown	unknown
YLR408C	__________	+1.14	178157	202800	unknown	unknown
YMR141C	__________	+1.37	300005	411677	unknown	unknown
YNL195C	__________	-1.20	141636	117863	unknown	unknown
YOL101C	__________	-1.39	385083	277572	unknown	unknown
YOR311C	__________	+1.02	646596	656435	unknown	unknown
YPR006C	ICL2______	-1.09	418584	382318	unknown	isocitrate lyase, nonfunctional
YBL101C	ECM21_____	+1.36	93363	126890	cell wall biogenesis	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YCL006C	__________	+1.54	293647	451808
YDL103C	QRI1______	+1.22	502136	613253	UDP-N-acetylglucosamine biosynthesis	UDP-N-acetylglucosamine pyrophosphorylase
YDR226W	ADK1______	-1.03	4652453	4503429	metabolism	cytosolic adenylate kinase
YEL007W	__________	+1.12	123910	139374	unknown	unknown; similar to Yhr177p
YFR026C	__________	+1.34	131852	176051	unknown	unknown
YGR029W	ERV1______	+1.12	326173	365247	mitochondrial biogenesis	unknown; similar to human ALR protein
YHR043C	DOG2______	+1.27	531697	672912	2-deoxyglucose resistance	2-deoxyglucose-6-phosphate phosphatase
YIR014W	__________	-1.05	133938	127021	unknown	unknown
YJR070C	__________	-1.74	2206749	1268064	unknown	unknown
YKR067W	__________	+1.08	173100	187570	unknown	unknown; similar to Sct1p
YLR224W	__________	+1.09	389873	426385	unknown	unknown
YNL007C	SIS1______	+1.24	1813339	2240879	translation	heat shock protein, homolog of E. coli DnaJ
YNR046W	__________	-1.48	1430595	965969	unknown	unknown
YOR125C	CAT5______	-1.07	471101	440426	ubiquinone biosynthesis	unknown
YPL101W	__________	-1.37	562751	409837	unknown	unknown
YPR192W	AQY1______	-1.14	202719	177565	transport, water	aquaporin
YAL020C	ATS1______	+1.29	120548	155742	cytoskeleton (putative)	unknown; similar to human RCC1
YBR184W	__________	+1.18	179994	211853	unknown	unknown
YCRX14W	__________	+1.03	243408	250146
YDR055W	PST1______	+4.00	609559	2436882	unknown	unknown; secreted by regenerating protoplasts
YDR422C	SIP1______	+1.38	220251	304552	transcription	negative regulator of GAL genes
YER117W	RPL23B____	+1.16	10176085	11845900	protein synthesis	ribosomal protein L23B
YGL115W	SNF4______	-1.02	885436	871261	glucose derepression	component of Snf1 complex
YGR222W	PET54_____	+1.16	270510	314779	protein synthesis	translation activator of COX3
YIL018W	RPL2B_____	+1.05	15890172	16643171	protein synthesis	ribosomal protein L2B
YJL116C	NCA3______	+1.02	300998	306133	ATP synthesis	regulates expression of F0F1 ATPase subunits
YKL112W	ABF1______	+1.05	411526	432272	transcription	ARS-binding factor
YLR046C	__________	+1.19	324621	386896	unknown	unknown
YLR418C	CDC73_____	-1.03	480263	467619	transcription	RNA polymerase II accessory protein
YMR153W	NUP53_____	-1.08	649004	601337	nuclear protein targeting	nuclear pore protein
YNL207W	__________	-1.04	167968	160982	unknown	unknown
YOL111C	__________	+1.01	1004728	1018515	unknown	unknown; similar to human ubiquitin-like protein GDX
YOR323C	PRO2______	-1.26	2730350	2167426	proline biosynthesis	gamma-glutamyl phosphate reductase
YPR018W	RLF2______	-1.08	159538	147994	chromatin structure	chromatin assembly factor I subunit
YBL111C	__________	+1.13	406794	460574	unknown	unknown
YCL019W	__________	+1.11	15050258	16660929	unknown	unknown
YDL115C	__________	+1.27	430938	545140	unknown	unknown
YEL018W	__________	+1.34	308849	413914	unknown	unknown
YFR036W	CDC26_____	+1.15	259810	298837	cell cycle	anaphase-promoting complex subunit
YHR054C	__________	-1.04	1143941	1095120	unknown	unknown
YJR083C	__________	+1.17	256828	299538	unknown	unknown
YKR079C	__________	-1.02	1575478	1537682	unknown	unknown
YLR234W	TOP3______	+1.03	139168	143984	DNA replication	DNA topoisomerase III
YML103C	NUP188____	-1.13	743884	657849	nuclear protein targeting	nuclear pore protein
YNL019C	__________	-1.27	170250	134099	unknown	unknown
YNR058W	BIO3______	+1.03	209275	216239	biotin biosynthesis	DAPA aminotransferase
YOR137C	__________	+1.21	219822	265291	unknown	unknown
YPL113C	__________	-1.22	201991	165930	unknown	unknown; similar to E. coli 2-hydroxyacid dehydrogenase
YPR204W	__________	-1.22	4799696	3941937	unknown	unknown; similar to other subtelomerically-encoded proteins
YAL031C	FUN21_____	+1.20	149442	179193	unknown	unknown
YBR196C	PGI1______	+1.24	4946575	6147846	glycolysis	glucose-6-phosphate isomerase
YDR067C	__________	+1.51	256415	387665	unknown	unknown
YDR434W	__________	+1.31	436078	570564	unknown	unknown
YER128W	__________	+1.30	151240	196613	unknown	unknown
YGL127C	SOH1______	+1.47	242862	355810	unknown	unknown; similar to RNA polymerases
YGR234W	YHB1______	-1.40	5946252	4244913	oxidative stress response (putative)	flavohemoglobin
YIL030C	SSM4______	-1.08	1092057	1014985	mRNA decay	unknown
YJL128C	PBS2______	+1.22	364214	445353	signaling	two-component pathway
YKL124W	SSH4______	-1.04	320853	309210	unknown	suppresses shr3 mutation
YLR058C	SHM2______	-1.74	1990159	1141265	one-carbon interconversion	serine hydroxymethyltransferase
YLR428C	__________	-1.36	166413	122377	unknown	unknown
YMR163C	__________	+1.01	217153	218621	unknown	unknown
YNL219C	ALG9______	-1.14	483084	423203	protein glycosylation	mannosyltransferase
YOL123W	HRP1______	-1.15	1742362	1513432	mRNA processing	poly(A)+ RNA-binding protein, putative
YOR335C	ALA1______	-1.35	1008216	748005	protein synthesis	tRNA synthetase, alanyl
YPR030W	CSR2______	-1.15	129761	112582	unknown	unknown; multicopy suppressor of chs5 spa2 double mutant
YBR010W	HHT1______	+1.08	9466383	10181953	chromatin structure	histone H3
YCL031C	RRP7______	+1.21	1348825	1629565	rRNA processing	unknown
YDL127W	PCL2______	+1.17	359538	421549	cell cycle	G1/S cyclin
YDR250C	__________	+1.10	178649	196144	unknown	unknown
YEL030W	ECM10_____	+1.05	210044	220196	cell wall biogenesis	heat shock protein (HSP70)
YFR047C	__________	+1.27	746452	951207	unknown	unknown; similar to Rhodospirillum rubrum and S. typhimurium nicotinate-nucleotide pyrophosphorylase
YGR048W	UFD1______	+1.07	317390	339045	protein degradation, ubiquitin-mediated	unknown; ubiquitin fusion degradation
YHR064C	PDR13_____	-1.06	1689798	1600958	drug resistance	HSP70 homolog
YIR035C	__________	-1.05	532647	507179	unknown	unknown; similar to proteins of the human corticosteroid
YKR091W	SRL3______	+4.46	226189	1007825	unknown	unknown; suppressor of Rad53 lethality
YLR246W	ERF2______	+1.31	219346	287257	signaling (putative)	unknown; synthetic lethal with Ras CaaX mutant
YML115C	VAN1______	-1.22	766859	626210	protein glycosylation and vanadate resistance	mannosyltransferase
YNL031C	HHT2______	+1.01	10247820	10309309	chromatin structure	histone H3
YNR070W	__________	+1.04	257175	267380	unknown	unknown; ATP-binding cassette (ABC) family
YOR147W	__________	+1.07	243467	260509	unknown	unknown
YPL125W	KAP120____	+1.03	124340	127930	nuclear protein targeting	karyopherin
YAL041W	CDC24_____	+1.16	520376	605777	cell polarity	GDP/GTP exchange factor for Cdc42p
YBR208C	DUR1,2____	-1.01	492901	489859	nitrogen, amino acid, nucleotide metabolism	urea amidolyase
YDR079W	PET100____	+1.07	511097	547657	respiration	cytochrome-c oxidase assembly
YDR446W	ECM11_____	-1.27	423708	332890	cell wall biogenesis	unknown
YER138C	__________	+1.05	16008005	16738064	unknown	unknown
YGL139W	__________	-1.14	4819944	4242614	unknown	unknown
YGR246C	BRF1______	-1.05	674579	643554	transcription	TFIIIB 70 kD subunit
YIL042C	__________	+1.17	217306	253226	unknown	unknown; similar to mitochondrial branched chain
YJL140W	RPB4______	+1.31	808438	1061672	transcription	RNA polymerase II 32 kDa subunit
YKL136W	__________	+1.00	183682	184055	unknown	unknown
YLR070C	__________	+1.03	181405	187201	unknown	unknown; similar to sugar dehydrogenases
YLR440C	__________	-1.02	420751	412078	unknown	unknown
YNL231C	PDR16_____	-1.04	1302506	1246916	drug resistance	unknown
YOL135C	MED7______	-1.07	571911	534927	transcription	RNA polymerase II mediator subunit
YOR345C	__________	-1.07	161292	151049	unknown	unknown
YPR042C	PUF2______	-1.07	125290	116894	unknown	mRNA binding protein
YBR020W	GAL1______	+1.08	314588	338957	galactose metabolism	galactokinase
YCL043C	PDI1______	+1.25	3852229	4796481	protein folding	protein disulfide isomerase

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YDL137W	ARF2______	+1.21	5356187	6502400	secretion	ADP-ribosylation factor
YEL042W	GDA1______	-1.27	827608	651317	Golgi organization	Golgi membrane guanosine diphosphatase
YGR060W	ERG25_____	-1.18	168955	143317	sterol metabolism	C-4 sterol methyl oxidase
YHR075C	PPE1______	+1.07	249449	266287	protein synthesis	ribosomal protein, mitochondrial small subunit; carboxymethyl esterase
YJR106W	ECM27_____	-1.11	136591	122738	cell wall biogenesis	unknown
YKR103W	__________	-1.16	101990	87945	unknown	ATP-binding cassette (ABC) superfamily
YML126C	ERG13_____	-1.16	2370793	2036483	sterol metabolism	3-hydroxy-3-methylglutaryl coenzyme A synthase
YNL041C	__________	+1.03	281771	289414	unknown	unknown
YOR159C	SME1______	-1.22	409196	336024	mRNA splicing	U1, U2 snRNP protein
YPL137C	__________	-1.02	143126	140689	unknown	unknown; similar to Mhp1p
YAL054C	ACS1______	+1.02	101069	103349	acetyl-CoA biosynthesis	acetyl-CoA synthetase
YBR220C	__________	+1.00	221234	222247	unknown	unknown; similar to E. coli ampG protein
YDR091C	RLI1______	-1.09	778417	711598	unknown	unknown; similar to members of the ATP-binding cassette
YDR458C	__________	+1.11	303191	337628	unknown	unknown
YGL151W	NUT1______	-1.06	110167	104287	mating type switching	negative regulator of HO endonuclease
YGR258C	RAD2______	-1.06	117350	111217	DNA repair, nucleotide excision	single-stranded DNA endonuclease
YIL054W	__________	-1.09	98028	89747	unknown	unknown
YJL152W	__________	+1.41	821188	1157787	unknown	unknown
YKL148C	SDH1______	+1.46	307983	448169	TCA cycle, oxidative phosphorylation	succinate dehydrogenase flavoprotein subunit
YLR082C	SRL2______	-1.11	167787	150945	unknown	unknown; suppressor of Rad53 lethality
YLR452C	SST2______	-1.44	1115341	776734	mating	negative regulator of Gpa1
YMR185W	__________	+1.07	210856	225568	unknown	unknown
YNL243W	SLA2______	+1.04	1245738	1289547	cytoskeleton	talin-like protein
YOL147C	PEX11_____	+1.08	447836	482856	peroxisome biogenesis	peripheral membrane protein
YOR357C	GRD19_____	-1.01	585701	580088	secretion	Golgi protein retention
YPR054W	SMK1______	-1.08	178826	165493	sporulation	MAP kinase
YBR032W	__________	+1.09	347018	379211	unknown	unknown
YCL055W	KAR4______	-1.22	274972	225862	karyogamy	transcription factor
YDL149W	APG9______	-1.25	230885	184078	autophagy	unknown; integral membrane protein
YDR270W	CCC2______	-1.02	176474	172270	oxidative phosphorylation	Cu(2+)-transporting ATPase
YEL054C	RPL12A____	-1.29	15779982	12230296	protein synthesis	ribosomal protein L12A
YGR072W	UPF3______	-1.05	457119	434758	mRNA decay, nonsense-mediated	unknown
YHR086W	NAM8______	-1.04	229835	220822	RNA splicing, mitochondrial	RNA binding protein
YJR118C	ILM1______	+1.05	629435	658937	mitochondrial genome maintenance (putative)	unknown
YLR266C	__________	+1.06	213258	225335	unknown	unknown; similar to transcription factors, has Zn[2]-Cys[6]
YMR005W	MPT1______	-1.10	746166	675906	protein synthesis	unknown
YNL053W	MSG5______	+1.56	372206	581049	signaling, pheromone pathway	dual-specificity protein phosphatase
YOR171C	LCB4______	-1.30	517089	398320	sphingolipid metabolism	long chain base kinase
YPL149W	APG5______	+1.15	375132	432292	autophagy	unknown
YAL065C	__________	+1.25	222783	277861	unknown	unknown; similar to Flo1p
YBR232C	__________	+1.06	135618	144419	unknown	unknown
YDR101C	__________	-1.43	1215430	848529	unknown	unknown
YDR470C	__________	+1.10	224201	246689	unknown	unknown; mitochondrial carrier (MCF) family
YGL163C	RAD54_____	+1.14	125979	143906	DNA repair	DNA-dependent ATPase
YGR270W	YTA7______	+1.11	108104	119935	protein degradation	26S proteasome subunit; ATPase
YIL066C	RNR3______	-1.42	227622	160003	DNA repair	repair-induced ribonucleotide reductase
YJL164C	SRA3______	+1.27	341505	433133	signaling	cAMP-dependent protein kinase subunit
YKL160W	__________	+1.12	1595834	1792088	unknown	unknown
YLR094C	GIS3______	-1.14	410097	360106	unknown	unknown
YLR464W	__________	+1.09	355166	388849	unknown	unknown; similar to other subtelomerically-coded proteins
YMR196W	__________	-1.07	987784	926388	unknown	unknown
YNL255C	GIS2______	-1.25	3607204	2892741	unknown	unknown; gig3 suppressor
YOL159C	__________	+1.64	408109	667900	unknown	unknown; similar to Ovis aries melatonin receptor
YOR369C	RPS12_____	+1.03	16008005	16562083	protein synthesis	ribosomal protein S12
YPR066W	UBA3______	-1.21	636667	525583	protein degradation, Rub1p-mediated	Rub1p activating protein
YBR044C	TCM62_____	+1.09	222374	241818	protein folding	chaperone, mitochondrial (putative)
YCL067C	HMLALPHA2_	+1.29	871408	1122118	transcription	silenced copy at HML; see YCR039C
YDL161W	ENT1______	+1.26	595839	753232	endocytosis (putative)	unknown; epsin homolog
YDR282C	__________	+1.16	195639	227485	unknown	unknown
YEL065W	SIT1______	+1.17	287612	336430	transport	Ferrioxamine B permease
YGR084C	MRP13_____	+1.02	362061	369573	protein synthesis	ribosomal protein, mitochondrial small subunit
YHR098C	SFB3______	-1.13	694457	612275	unknown	unknown; binds Sed3p and Sec23p
YJR130C	STR2______	+1.08	245082	264268	methionine biosynthesis	O-succinylhomoserine (thiol)-lyase
YLR278C	__________	+1.05	83452	87241	unknown	unknown; similar to transcription factors, has Zn[2]-Cys]
YMR017W	SPO20_____	+1.01	128362	129045	sporulation	SNAP 25 homolog; prospore membrane formation
YNL063W	__________	-1.05	344530	327981	unknown	unknown; similar to Mycoplasma protophorphyrinogen oxidase
YOR183W	__________	-1.01	124864	123137	unknown	unknown
YPL161C	BEM4______	-1.01	114812	114019	bud emergence	interacts with Rho-type GTPases
YAR015W	ADE1______	-1.71	3192979	1863918	purine biosynthesis	phosphoribosylaminoimidazole-succinocarboxamide synthase
YBR244W	GPX2______	-1.03	955719	925042	mitochondrial morphology; glutathione metabolism (putative)	glutathione peroxidase (putative)
YDR113C	PDS1______	+1.08	357004	383879	cell cycle	anaphase inhibitor (putative)
YDR482C	__________	+1.29	401919	518488	unknown	unknown
YER169W	RPH1______	+1.07	202534	215840	DNA repair	transcriptional repressor of PHR1
YGL175C	SAE2______	-1.06	112169	105975	meiosis, recombination	unknown
YGR282C	BGL2______	+1.06	5172065	5477378	cell wall biogenesis	endo-beta-1,3-glucanase
YIL075C	RPN2______	-1.03	1433223	1392047	tRNA processing	26S proteasome subunit)
YJL176C	SWI3______	+1.06	326386	345358	transcription	component of SWI/SNF global activator complex
YKL172W	EBP2______	-1.45	2193703	1513988	unknown	unknown; EBNA1-binding protein homolog
YLR106C	__________	+1.05	93651	98599	unknown	unknown; similar to Rnh70p
YMR208W	ERG12_____	-1.06	585630	552966	sterol metabolism	mevalonate kinase
YNL267W	PIK1______	-1.01	106374	105334	cytokinesis	phosphatidylinositol 4-kinase
YOR005C	DNL4______	+1.03	333141	343334	DNA repair	DNA ligase IV homologue
YOR381W	FRE3______	+1.01	111974	113632	unknown	unknown; similar to Fre2p
YPR078C	__________	+1.99	177563	352929	unknown	unknown
YBR056W	__________	+1.82	603781	1097765	unknown	unknown; similar to glucan-1,3-beta-glucosidase
YCLX06C	__________	+1.15	543755	623144
YDL173W	__________	+1.28	536599	686070	unknown	unknown
YDR294C	DPL1______	+1.09	539191	586570	phospholipid metabolism	dihydrosphingosine phosphate lyase
YEL076C	__________	+1.20	213799	255930	unknown	unknown; similar to other subtelomerically-encoded proteins
YGR096W	__________	-1.10	177514	161155	unknown	unknown
YHR110W	ERP5______	+1.18	769362	905778	membrane trafficking; secretion (putative)	unknown
YJR142W	__________	+1.28	296859	380817	unknown	unknown; similar to thiamine pyrophosphokinase
YLR289W	GUF1______	-1.04	100737	96559	unknown	GTPase; similar to E. coli LepA
YMR029C	__________	-1.04	93399	90190	unknown	unknown
YNL075W	IMP4______	-1.39	665503	477929	rRNA processing	U3 snoRNP protein
YOR193W	__________	+1.30	237685	309102	unknown	unknown
YPL173W	MRPL40____	+1.14	339978	386738	protein synthesis	ribosomal protein, mitochondrial L40
YAR037W	__________	+1.07	137064	146541
YBR256C	RIB5______	+1.31	895067	1176952	flavin biosynthesis	riboflavin synthase, alpha chain
YDR125C	ECM18_____	+1.05	148082	155563	cell wall biogenesis	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YDR494W	__________	+1.09	349640	381627	unknown	unknown
YER180C	ISC10_____	+1.09	359035	392943	meiosis, spore formation	unknown
YGL187C	COX4______	+1.52	848496	1293274	oxidative phosphorylation	cytochrome-c oxidase subunit IV
YGR294W	__________	+1.11	431441	477920	unknown	PAU1 unknown; family
YIL086C	__________	+1.06	181871	192713	unknown	unknown
YJL188C	__________	+1.09	10879820	11849988	unknown	unknown
YKL184W	SPE1______	-1.15	1753069	1528365	polyamine biosynthesis	ornithine decarboxylase
YLR118C	__________	+1.08	520621	561979	unknown	unknown
YMR220W	ERG8______	-1.03	853338	828822	sterol metabolism	phosphomevalonate kinase
YNL279W	PRM1______	-1.08	221219	205047	mating (putative)	unknown; pheromone-regulated membrane protein
YOR017W	PET127____	-1.02	448881	441505	protein synthesis	mitochondrial translation
YOR393W	ERR1______	-1.30	339468	260609	unknown	enolase homolog
YPR090W	__________	-1.08	97261	90364	unknown	unknown
YBR068C	BAP2______	-1.02	102070	100137	transport	branched-chain amino acid permease
YCR006C	__________	+1.08	151392	163126	unknown	unknown
YDL185W	TFP1______	-1.06	2432946	2288770	vacuolar acidification	vacuolar H+-ATPase subunit
YDR306C	__________	+1.02	188435	191881	unknown	unknown
YER009W	NTF2______	+1.01	3727683	3759073	nuclear protein targeting	nuclear transport factor
YGR108W	CLB1______	+1.31	925544	1210597	cell cycle	G2/M cyclin
YHR122W	__________	-1.07	694283	647794	unknown	unknown
YJR154W	__________	-1.27	118297	93327	unknown	unknown
YLR301W	__________	-1.04	1575342	1510640	unknown	unknown
YMR040W	__________	+1.21	188004	228314	unknown	unknown; similar to Ykl065p
YNL087W	__________	-1.04	90876	87050	unknown	unknown
YOR205C	__________	-1.01	196545	195538	unknown	unknown
YPL184C	__________	-1.09	122708	112493	unknown	unknown
YBL005W	PDR3______	+1.07	157904	169250	transport	transcription factor
YBR268W	MRPL37____	+1.34	454484	607138	protein synthesis	ribosomal protein, mitochondrial L37
YDL007W	RPT2______	+1.45	712953	1034394	protein degradation	26S proteasome subunit
YDR137W	RGP1______	+1.36	237909	324340	unknown	unknown
YDR506C	__________	+1.13	136344	154079	unknown	unknown; similar to Fet5p
YFL005W	SEC4______	+1.20	384776	461232	secretion	ras-like GTPase; post-Golgi
YGL199C	__________	-1.00	413792	413729	unknown	unknown
YHL006C	__________	+1.09	199383	218258	unknown	unknown
YIL098C	FMC1______	+1.06	257841	273791	respiration (putative)	production or assembly of mitochondrial cytochromes
YJL200C	__________	-1.21	441284	365309	unknown	unknown; similar to aconitase, has potential mitochondrial
YKL196C	YKT6______	-1.11	1570728	1419095	secretion	ER-to-Golgi v-SNARE
YLR130C	ZRT2______	-1.45	899142	621003	transport	zinc transporter
YML007W	YAP1______	+1.01	760590	765992	oxidative stress	transcriptional activator
YMR232W	FUS2______	-1.13	226933	200431	mating; cell fusion	fus1 suppressor
YNL289W	PCL1______	-1.41	1474821	1047519	cell cycle	G1/S cyclin
YOR029W	__________	-1.20	241131	200715	unknown	unknown
YPL007C	TFC8______	-1.22	364348	299428	transcription	TFIIIC subunit
YPR102C	RPL11A____	+1.03	15860839	16324991	protein synthesis	ribosomal protein L11A
YBR080C	SEC18_____	+1.55	405220	628534	secretion	NSF; vesicle fusion
YCR018C	SRD1______	+1.07	85045	91271	rRNA processing	nucleolar protein
YDL197C	ASF2______	+1.22	171589	209152	transcription	anti-silencing protein
YER019C	SBH2______	+1.45	243388	352485	secretion	ER protein translocation complex subunit
YGL007W	__________	+1.18	88544	104751	unknown	unknown
YGR118W	RPS23A____	+1.00	15721991	15771047	protein synthesis	ribosomal protein S23A
YHR133C	__________	-1.05	1556637	1486393	unknown	unknown
YJL007C	__________	-1.28	216073	168579	unknown	unknown
YKL006W	RPL14A____	-1.01	12743738	12589672	protein synthesis	ribosomal protein L14A
YLL007C	__________	-1.04	411780	397224	unknown	unknown
YNL099C	__________	-1.22	614141	504659	unknown	unknown
YOL007C	CSI2______	+1.06	494290	523036	cell wall biogenesis	chitin synthase 3 subunit
YOR217W	RFC1______	-1.44	733148	507417	DNA replication	DNA replication factor C 95 KD subunit
YPL196W	__________	+1.18	411435	483656	unknown	unknown
YAR064W	__________	-1.13	129991	115508	unknown	unknown
YBL017C	PEP1______	+1.18	204152	240532	vacuolar protein targeting	CPY sorting receptor
YBR280C	__________	+1.28	124571	159860	unknown	unknown; similar to Srm1p/Prp20p
YDL019C	__________	+1.46	411862	599481	unknown	unknown; similar to Swh1p
YDR149C	__________	+1.17	117505	137734	unknown	unknown
YDR518W	EUG1______	+1.17	360380	421323	protein folding	protein disulfide isomerase
YFL014W	HSP12_____	+3.13	160960	503913	glucose and lipid utilization	heat shock protein
YGL211W	__________	-1.16	246288	213065	unknown	unknown
YHL015W	RPS20_____	-1.31	11108511	8455787	protein synthesis	ribosomal protein S20
YIL109C	SEC24_____	+1.12	904837	1017129	secretion	vesicle coat component
YJL212C	OPT1______	-1.66	594145	358085	transport	oligopeptide transporter
YKL208W	CBT1______	+1.09	184192	201656	mRNA processing, COB mRNA	unknown
YLR142W	PUT1______	+1.77	132139	233484	proline utilization	proline oxidase
YML016C	PPZ1______	+1.36	340110	463284	stress response	ser/thr phosphatase
YMR244W	__________	-1.14	140895	123742	unknown	unknown; similar to Nca3p
YNL301C	RPL18B____	-1.02	15448758	15214799	protein synthesis	ribosomal protein L18B
YOR041C	__________	-1.26	569696	453074	unknown	unknown
YPL019C	PHM2______	-1.58	998605	630584	phosphate metabolism (putative)	polyphosphate synthetase (putative)
YPR114W	__________	-1.24	692177	556703	unknown	unknown
YBR090C	__________	+1.56	320765	500141	unknown	unknown
YCR028C	FEN2______	+1.27	106258	134603	unknown	unknown; similar to Dal5p and members of the allantoate
YDL209C	__________	+1.18	200577	237603	unknown	unknown
YDR328C	SKP1______	+1.00	1081730	1085064	mitosis	kinetochore protein
YER031C	YPT31_____	+1.59	1214198	1929875	secretion	rab GTPase; intra-Golgi
YGL019W	CKB1______	+1.01	680741	689977	salt tolerance	casein kinase II subunit
YGR130C	__________	+1.37	400291	548077	unknown	unknown; similar to Entamoeba histolytica myosin heavy chain
YHR143W	__________	+1.09	3432273	3747371	unknown	unknown
YJL019W	__________	+1.23	200967	248170	unknown	unknown
YKL018W	__________	+1.04	376215	390348	unknown	unknown
YLL019C	KNS1______	+1.19	159295	188813	unknown	protein kinase
YLR324W	__________	+1.18	325531	383085	unknown	unknown
YMR061W	RNA14_____	-1.13	523487	465117	mRNA 3'-end processing	cleavage/polyadenylation factor CF I component
YNL111C	CYB5______	-1.29	700173	541019	lipid metabolism	cytochrome b5
YOL019W	__________	+1.42	357359	506868	unknown	unknown
YOR229W	WTM2______	-1.12	694876	619977	transcription	shared subunit of RNA polymerases I, II, and III
YPL208W	__________	-1.07	460698	428589	unknown	unknown
YBL029W	__________	+1.17	461896	542543	unknown	unknown
YBR292C	__________	+1.22	134215	163742	unknown	unknown
YDL031W	DBP10_____	+1.03	383504	395274	unknown	unknown; similar to RNA helicases
YDR161W	TCI1______	-1.03	646020	626124	unknown	interacts with PP2C
YDR530C	APA2______	+1.37	194132	265283	purine metabolism	ATP adenylyltransferase II
YFL024C	EPL1______	+1.18	118869	140852	unknown	putative chromatin protein

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YGL223C	__________	+1.20	185769	222136	unknown	unknown
YHL027W	RIM101____	+1.18	2506479	2954499	meiosis	transcription factor
YIL121W	__________	+1.15	430289	493834	unknown	unknown; major facilitator superfamily
YJL225C	__________	+1.09	1491560	1622593	unknown	unknown; similar to other subtelomerically-encoded proteins
YKL220C	FRE2______	+1.15	127906	146594	iron homeostasis	ferric (and cupric) reductase
YLR154C	__________	+1.21	319185	386576	unknown	unknown
YML028W	TSA1______	-1.03	15765512	15321556	oxidative stress response	thiol-specific
YNL313C	__________	-1.11	235159	211513	unknown	unknown
YOR053W	__________	+1.13	1559378	1765907	unknown	unknown; similar to protamines
YPL031C	PHO85_____	+1.10	720409	790878	phosphate metabolism; cell cycle; glycogen metabolism	protein kinase
YPR126C	__________	-1.02	424693	417796	unknown	unknown
YBR102C	EXO84_____	+1.20	277679	332577	secretion	exocyst complex subunit
YCR039C	MATALPHA2_	+1.31	238713	313066	transcription	a-specific gene repressor
YDL221W	__________	+1.21	232183	281219	unknown	unknown
YDR340W	__________	-1.11	3711410	3345902	unknown	unknown; similar to Cyc1/Cyp3 transcription activator
YER042W	MXR1______	+1.11	614356	684804	oxidative stress response	peptide-methionine sulfoxide reductase
YGL031C	RPL24A____	+1.04	15680850	16316027	protein synthesis	ribosomal protein L24A
YGR142W	BTN2______	+1.51	611846	926372	unknown	unknown
YHR155W	__________	+1.10	124164	136284	unknown	unknown; similar to Sip3p
YJL031C	BET4______	-1.01	5106688	5064349	protein processing	geranylgeranyl transferase subunit
YKL030W	__________	-1.55	971361	627192	unknown	unknown
YLL031C	GPI13_____	+1.10	300638	330955	protein processing	phosphoryltransferase (GPI anchor synthesis)
YLR336C	SGD1______	-1.02	281022	274647	signaling (putative)	high osmolarity pathway
YMR073C	__________	-1.20	535501	447224	unknown	unknown; similar to rat cytochrome b5
YNL123W	__________	-1.07	434954	406899	unknown	unknown
YOL031C	__________	+1.31	491805	645413	unknown	unknown; similar to Yarrowia lipolytica Sls1 protein
YOR241W	MET7______	-1.20	895360	745033	methionine biosynthesis	folylpolyglutamate synthase
YPL220W	RPL1A_____	+1.05	16008005	16738064	protein synthesis	ribosomal protein L1A
YBL041W	PRE7______	+1.19	1135192	1351811	protein degradation	20S proteasome subunit
YDL043C	PRP11_____	+1.13	230822	261123	mRNA splicing	U2, U5, U4/U6 snRNP protein
YDR171W	HSP42_____	+2.21	387281	856434	cytoskeleton assembly	heat shock protein, similar to HSP26
YDR542W	__________	+1.38	308886	424837	unknown	unknown
YFL034W	__________	+1.00	130847	131121	unknown	unknown
YGL234W	ADE5,7____	-1.80	2901813	1616596	purine biosynthesis	phosphoribosylamine-glycine ligase and phosphoribosylformylglycinamidine cyclo-ligase
YHL038C	CBP2______	-1.01	260034	257026	mRNA splicing, COB mRNA	pre-mRNA binding protein
YIL133C	RPL16A____	-1.02	12618092	12333414	protein synthesis	ribosomal protein L16A
YJR011C	__________	+1.07	333380	355632	unknown	unknown
YKR007W	__________	+1.15	509681	587113	unknown	unknown
YLR164W	__________	-1.00	179530	178901	unknown	unknown; similar to Sdh4p
YML038C	YMD8______	+1.03	581548	598524	unknown	unknown; similar to vanadate resistance protein Gog5p
YMR268C	PRP24_____	-1.11	297888	267214	mRNA splicing	U4/U6 snRNP protein
YNL325C	FIG4______	-1.05	126741	120777	mating (putative)	unknown; induced by mating factor
YOR065W	CYT1______	+1.61	642365	1032730	oxidative phosphorylation	cytochrome c1
YPL043W	NOP4______	-1.61	970539	603839	rRNA processing	RNA binding protein
YBR113W	__________	+1.25	295928	369545	unknown	unknown
YCR051W	__________	-1.15	1074445	930586	unknown	unknown; similar to ankyrin and coiled-coil protein
YDL233W	__________	+1.28	252546	322852	unknown	unknown
YDR352W	__________	+1.02	362040	367694	unknown	unknown
YER052C	HOM3______	-1.03	911415	886390	Met. and Thr. biosynthesis	aspartate kinase
YGL043W	DST1______	-1.02	101032	98858	transcription	elongation factor TFIIS
YGR154C	__________	-1.03	183655	178793	unknown	unknown
YHR167W	__________	-1.04	222314	213066	unknown	unknown
YJL044C	GYP6______	-1.06	688120	649340	secretion	GTPase-activating protein for Ypt6
YKL041W	VPS24_____	+1.02	502596	514628	vacuolar protein targeting	component of class E protein complex
YLL043W	FPS1______	-1.08	612202	569033	transport	glycerol channel protein
YLR348C	DIC1______	-2.29	771857	336500	transport	mitochondrial dicarboxylate carrier
YNL135C	FPR1______	-1.08	2353483	2184224	protein folding	peptidyl-prolyl cis-trans isomerase
YOL043C	NTG2______	+1.08	303343	326751	DNA repair	endonuclease III-like glycosylase
YOR253W	__________	-1.06	1265255	1191092	unknown	unknown
YPL232W	SSO1______	+1.26	1317242	1657993	secretion	post-Golgi t-SNARE
YBL053W	__________	+1.19	357315	426300	unknown	unknown
YDL055C	PSA1______	-1.00	6068141	6054644	mannose metabolism	mannose-1-phosphate guanyltransferase
YDR182W	CDC1______	+1.13	479920	543108	Mn2+ ion homeostasis	unknown
YFL046W	__________	+1.39	303200	422618	unknown	unknown; similar to myosin heavy chain A
YGL246C	RAI1______	-1.12	539185	482591	unknown	unknown; similar to C. elegans DOM-3 (GB:1004375)
YHL049C	__________	-1.01	315280	311975	unknown	unknown; similar to other subtelomerically-encoded proteins
YIL145C	__________	-1.22	820109	673579	unknown	unknown; similar to E. coli pantoate beta-alanine ligase
YJR023C	__________	+1.06	198503	210023	unknown	unknown; similar to sodium channel proteins
YKR019C	IRS4______	-1.15	186130	162153	silencing (rDNA)	unknown
YLR176C	RFX1______	+1.05	192674	201665	unknown	unknown; DNA binding protein
YMR280C	CAT8______	+1.01	556271	563468	gluconeogenesis	transcription factor
YNL337W	__________	+1.06	144185	152796	unknown	unknown
YOR077W	RTS2______	-1.20	190841	159545	unknown	unknown; similar to mouse KIN7 protein
YPL055C	__________	+1.03	448742	463356	unknown	unknown
YPR148C	__________	+1.06	94481	100599	unknown	unknown
YBR125C	PTC4______	-1.01	401947	396146	unknown	protein phosphatase type 2C
YCR063W	__________	+1.01	122508	123810	unknown	unknown; similar to Xenopus G10, a developmentally-regulated
YDL245C	HXT15_____	+1.07	148751	159590	transport	hexose permease
YDR364C	CDC40_____	+1.05	264948	277715	cell cycle and mRNA splicing	unknown
YER062C	HOR2______	+1.08	2407172	2602772	glycerol metabolism	DL-glycerol-3-phosphatase
YGL055W	OLE1______	-1.53	1533430	1002092	fatty acid metabolism	delta-9-fatty acid desaturase
YGR162W	TIF4631___	-1.63	1240312	761177	protein synthesis	mRNA cap-binding protein (eIF4F) 150K subunit
YHR179W	OYE2______	-1.20	7634166	6375458	unknown	NAPDH dehydrogenase (old yellow enzyme)
YJL056C	ZAP1______	-1.15	153692	133729	transport (Zn)	transcription factor
YKL053W	__________	+1.26	481038	605762	unknown	unknown
YLL055W	__________	-1.08	105659	98191	unknown	unknown; similar to Dal5p and members of the allantoate
YLR360W	VPS38_____	+1.33	529042	702467	vacuolar protein targeting	unknown
YMR095C	SNO1______	-1.02	140856	138263	unknown	unknown; induced in stationary phase
YNL147W	LSM7______	+1.07	689916	740529	mRNA splicing (putative)	similar to snRNA-associated protein
YOL053W	__________	+1.13	299218	339609	unknown	unknown
YOR265W	RBL2______	-1.12	678136	607901	cytoskeleton	beta-tubulin binding protein
YPL244C	HUT1______	-1.15	380812	331661	unknown	unknown
YBL065W	__________	-1.03	100029	97369	unknown	unknown
YDL067C	COX9______	+1.33	744343	989633	oxidative phosphorylation	cytochrome c oxidase assembly
YDR194C	MSS116____	-1.20	538802	448267	mRNA splicing, mitochondrial	RNA helicase
YFL058W	THI5______	+1.09	169582	185428	pyrimidine biosynthesis	unknown
YGL258W	__________	-1.05	145312	138623	unknown	unknown
YHR009C	__________	+1.08	376958	407624	unknown	unknown
YJR034W	PET191____	+1.15	225450	259761	respiration	cytochrome c oxidase assembly
YKR031C	SPO14_____	-1.11	96192	86461	meiosis	phospholipase D

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YLR188W	MDL1______	-1.19	296246	249781	transport	ATP-binding cassette (ABC) family
YML058W	SML1______	+1.16	2259519	2626464	DNA replication (putative)	regulator of ribonucleotide reductase (putative)
YMR291W	__________	+1.35	302313	408445	unknown	unknown
YNR010W	CSE2______	+1.19	199667	237788	mitosis, chromosome segregation	kinetochore protein (putative)
YOR089C	VPS21_____	+1.09	850755	930299	endocytosis	rab5-like GTPase
YPL065W	VPS28_____	+1.14	249407	283951	vacuolar protein targeting	cytoplasmic protein
YBR137W	__________	+1.07	114670	122912	unknown	unknown
YCR073W	SOL2______	+1.07	133080	142092	tRNA splicing, putative	unknown
YDR009W	GAL3______	+1.05	131580	137604	galactose metabolism	galactokinase
YDR374C	__________	+1.09	117642	127650	unknown	unknown
YER071C	__________	-1.01	203415	200943	unknown	unknown
YGL067W	NPY1______	+1.03	115620	119163	NAD metabolism	NAD+ pyrophosphatase
YGR174C	CBP4______	+1.33	293540	391648	respiration	ubiquinol--cytochrome-c reductase assembly factor
YHR191C	CTF8______	+1.16	337231	390600	mitosis (putative)	kinetochore protein (putative)
YJL068C	__________	+1.16	503323	582008	unknown	unknown; similar to human esterase D
YKL065C	YET1______	+2.26	947778	2144664	unknown	ER 25 kDa transmembrane protein
YLL067C	__________	+1.04	94112	98230	unknown	unknown; similar to other subtelomerically-encoded proteins
YLR372W	SUR4______	-1.06	1895692	1786289	fatty acid metabolism	conversion of 24-carbon to 26-carbon fatty acids
YMR107W	__________	+1.08	107346	116016	unknown	unknown
YNL159C	__________	+1.36	362666	493437	unknown	unknown
YOL065C	INP54_____	+1.12	340897	382722	unknown	putative inositol polyphosphate 5-phosphatase
YOR277C	__________	-1.03	2000833	1948520	unknown	unknown
YPL255W	BBP1______	+1.07	355843	379135	cell cycle and meiosis	unknown
YMR322C	__________	+1.03	113731	117192	unknown	unknown
YBL077W	__________	-1.20	3380226	2815139	unknown	unknown
YDL079C	MRK1______	+1.09	243578	265182	unknown	protein kinase
YDR206W	EBS1______	-1.10	229382	208068	unknown	unknown; similar to Est1p; bcy1 suppressor
YFR002W	NIC96_____	-1.01	227321	225184	nuclear protein targeting	nuclear pore protein
YGR007W	MUQ1______	-1.14	452059	397210	phospholipid metabolism	choline phosphate cytidylyltransferase
YHR021C	RPS27B____	-1.17	6116903	5235554	protein synthesis	ribosomal protein S27B
YIL168W	SDL1______	-1.10	162314	147570	gluconeogenesis	serine dehydratase
YJR046W	TAH11_____	-1.28	314726	245383	unknown	unknown
YKR043C	__________	-1.44	1016990	705424	unknown	unknown
YLR200W	YKE2______	-1.09	713448	652111	cytoskeleton	microtubule nucleation
YML070W	DAK1______	+1.05	784919	825931	carbohydrate metabolism; stress response	dihydroxyacetone kinase
YMR302C	PRP12_____	+1.09	228397	249336	rRNA processing	mitochondrial inner membrane protein
YNR022C	__________	+1.10	506916	556681	unknown	unknown
YOR101W	RAS1______	-1.35	479531	354664	signaling, Ras pathway	GTP-binding protein, ras homolog
YPL077C	__________	+1.14	204812	233335	unknown	unknown; similar to Ybr197p
YPR168W	NUT2______	-1.11	113245	101809	mating type switching	negative regulator of HO expression
YBR149W	ARA1______	+1.49	1115032	1656916	arabinose metabolism	arabinose dehydrogenase
YCR087W	__________	-1.32	1615332	1222960	unknown	unknown
YDR021W	FAL1______	-1.26	456630	363286	rRNA processing	RNA helicase
YDR386W	MUS81_____	-1.01	205245	203251	DNA repair (putative)	unknown
YER083C	__________	+1.05	815830	856694	unknown	unknown
YGL079W	__________	+1.15	364888	418942	unknown	unknown
YGR186W	TFG1______	+1.09	866677	942711	transcription	TFIIF 105 kD subunit
YHR203C	RPS4B_____	+1.04	15550988	16191145	protein synthesis	ribosomal protein S4B
YJL080C	SCP160____	-1.19	1896948	1593916	mitosis, chromosome transmission	unknown
YKL077W	__________	-1.15	1052098	911232	unknown	unknown
YLR012C	__________	+1.06	142379	151229	unknown	unknown
YLR384C	IKI3______	-1.33	1542112	1155703	killer toxin sensitivity	unknown
YMR119W	__________	-1.06	311772	293576	unknown	unknown
YNL171C	__________	+1.06	274433	289677	unknown	unknown
YOL077C	__________	-1.47	1948462	1329120	unknown	unknown; similar to C. elegans Kq2H4.3 protein
YOR289W	__________	+1.33	321503	427142	unknown	unknown
YPL265W	DIP5______	-1.46	1245525	852468	transport	dicarboxylic amino acid permease
YBL089W	__________	+1.01	103046	103647	unknown	major facilitator superfamily
YDL091C	__________	+1.16	250554	291449	unknown	unknown
YDR214W	__________	+1.41	1153610	1625189	unknown	unknown
YFR014C	CMK1______	+1.06	267447	282530	signaling	calmodulin-dependent protein kinase
YGR019W	UGA1______	+1.30	458155	596942	GABA metabolism	4-aminobutyrate aminotransferase (GABA transaminase)
YHR032W	__________	-1.48	303043	204947	unknown	major facilitator superfamily
YIR002C	MPH1______	-1.02	322040	315686	unknown; mutator null phenotype	unknown; similar to ATP-dependent RNA helicases
YJR058C	APS2______	+1.10	530696	586086	secretion	AP-1 complex subunit
YKR055W	RHO4______	-1.07	209452	196282	signaling	GTP-binding protein, rho family
YLR212C	TUB4______	+1.02	358016	364679	cytoskeleton	gamma-tubulin
YML082W	__________	-1.24	302021	243619	unknown	unknown; similar to O-succinylhomoserine (thiol)-lyase
YMR312W	__________	-1.25	363663	289837	unknown	unknown
YNR034W	SOL1______	-1.06	311752	293911	tRNA splicing, putative	unknown
YOR113W	AZF1______	+1.04	123060	128164	transcription (putative)	similar to Zn-finger transcription factors
YPL089C	RLM1______	-1.05	92684	88329	cell wall organization	MADS box transcription factor
YPR180W	AOS1______	-1.03	87963	85799	protein degradation, Smt3p-mediated	Smt3p activating protein
YBR161W	__________	+1.17	293987	342891	unknown	unknown; similar to Sur1p, Hoc1p, and Och1p
YCR097W	HMRA1_____	-1.06	120342	113797
YDR033W	MRH1______	-1.04	2419230	2316669	unknown	similar to Yro2p and Hsp30p
YDR398W	__________	-1.31	334793	255796	unknown	unknown
YGL091C	NBP35_____	+1.25	391154	490077	unknown	unknown; essential; similar to bacterial partitioning ATPases
YGR198W	__________	-1.22	838344	686062	unknown	unknown
YJL092W	HPR5______	-1.07	228341	213929	meiosis	DNA helicase
YKL089W	MIF2______	+1.04	311854	322776	mitosis	centromere protein
YLR024C	UBR2______	-1.08	835764	771390	protein degradation, ubiquitin-mediated	ubiquitin-protein ligase
YLR396C	VPS33_____	-1.30	82339	63478	vacuolar protein targeting	Sec1 protein family
YMR130W	__________	+1.14	402007	460085	unknown	unknown
YNL183C	NPR1______	+1.06	175123	185955	transport	protein kinase; regulates activity of nitrogen source transporters
YOL089C	HAL9______	-1.04	94966	91570	salt tolerance	transcription factor (putative)
YOR300W	__________	+1.56	311521	484894	unknown	unknown
YPL277C	__________	-1.02	100444	98865	unknown	unknown
YAL009W	SPO7______	+1.10	90167	99445	meiosis	unknown
YBR173C	UMP1______	+1.46	421255	616854	protein degradation, ubiquitin-mediated	20S proteasome maturation factor
YCRX03C	__________	+1.03	115225	118956
YDR044W	HEM13_____	-1.13	361366	319808	heme biosynthesis	coproporphyrinogen III oxidase
YDR411C	__________	+1.40	413364	577100	unknown	unknown
YER106W	__________	+1.15	106133	122164	unknown	unknown
YGL104C	__________	+1.27	119320	151583	unknown	unknown; similar to glucose transport proteins
YGR211W	ZPR1______	-1.23	644781	523921	unknown	unknown; zinc finger protein
YIL008W	URM1______	-1.11	687542	617163	protein modification	ubiquitin-like protein
YJL105W	__________	+1.06	149799	158517	unknown	unknown; similar to Ykr029p
YKL101W	HSL1______	+1.64	470001	770564	cell cycle	negative regulator of swe1 kinase
YLR409C	__________	-1.17	173558	148852	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YNL196C	SLZ1______	-1.30	163589	126243	meiosis	unknown
YOL102C	TPT1______	-1.13	427686	377975	tRNA splicing	2'-phosphotransferase
YOR312C	RPL20B____	-1.01	15841572	15702559	protein synthesis	ribosomal protein L20B
YPR007C	SPO69_____	-1.07	452660	421191	sporulation	unknown
YBL101W	TY2A______	+1.44	972596	1399723	unknown	unknown
YCL007C	CWH36_____	+1.58	734221	1162617	cell wall biogenesis	unknown
YDL104C	QRI7______	+1.27	162833	206555	unknown	unknown; similar to E. coli orfx gene
YDR227W	SIR4______	+1.12	98983	111215	silencing	nuclear coiled-coil protein, regulator of silencing
YEL008W	__________	+1.13	120000	135324	unknown	unknown
YFR027W	ECO1______	+1.36	148670	202875	mitosis, sister chromatid cohesion (putative)	unknown
YGR030C	POP6______	+1.11	235016	260945	tRNA processing	RNase P and RNase MRP subunit
YHR044C	DOG1______	+1.39	436896	605651	2-deoxyglucose resistance	2-deoxyglucose-6-phosphate phosphatase
YIR015W	RPR2______	+1.06	128964	136786	tRNA processing	RNase P subunit
YJR071W	__________	-1.69	544950	323373	unknown	unknown
YKR068C	BET3______	+1.39	601103	836314	secretion	SNARE docking complex assembly
YLR225C	__________	+1.56	411788	643951	unknown	unknown
YNL008C	__________	-1.22	1404295	1150002	unknown	unknown; similar to Mdj2p, E. coli DnaJ, and other DnaJ-like
YNR047W	__________	-1.41	1282263	909645	unknown	unknown
YOR126C	IAH1______	+1.38	422610	581764	unknown	isoamyl acetate hydrolytic enzyme
YPL102C	__________	-1.34	164291	122642	unknown	unknown
YPR193C	HPA2______	-1.15	132136	115095	chromatin structure	histone acetyltransferase complex subunit
YAL021C	CCR4______	+1.11	96787	107611	catabolite repression	component of CCR4 transcriptional complex
YBR185C	MBA1______	+1.28	186855	239952	respiration	mitochondrial respiratory complex assembly
YCRX15W	__________	+1.14	103132	117623
YDR056C	__________	+1.24	751393	927983	unknown	unknown
YDR423C	CAD1______	+1.25	319799	399319	transcription	basic leu zipper transcription factor
YER118C	SHO1______	+1.21	463485	562722	signaling, high osmolarity pathway	transmembrane osmosensor
YGL116W	CDC20_____	+1.16	245669	285009	mitosis	activator of the anaphase promoting complex
YGR223C	__________	+1.15	321063	370386	unknown	unknown
YIL019W	__________	-1.49	429637	287959	unknown	unknown
YJL117W	PHO86_____	-1.07	1485342	1387892	transport	inorganic phosphate permease
YKL113C	RAD27_____	+1.05	486546	509926	DNA repair	ssDNA endonuclease
YLR047C	__________	+1.06	124976	133038	unknown	unknown
YLR419W	__________	-1.35	562769	417213	unknown	unknown; similar to pre-mRNA splicing factors
YNL208W	__________	+1.37	2132814	2927779	unknown	unknown
YOL112W	MSB4______	+1.53	434707	663802	unknown	unknown; suppresses bud emergence defect
YOR324C	__________	-1.06	116705	109611	unknown	unknown
YPR019W	CDC54_____	-1.37	429301	313231	DNA replication	MCM initiator complex
YBL112C	__________	-1.05	183607	174230	unknown	unknown
YCL020W	__________	+1.40	920617	1292826	unknown	unknown
YDL116W	NUP84_____	+1.17	288819	336776	nuclear protein targeting	nuclear pore protein
YEL019C	MMS21_____	+1.23	107041	131276	DNA repair	unknown
YHR055C	CUP1-2____	-1.03	4329590	4191636	Cu2+ ion homeostasis	metallothionein
YIR024C	GIF1______	+1.28	243549	312244	cell cycle, G1	unknown
YJR084W	__________	+1.24	256245	316841	unknown	unknown; similar to human sodium channel protein HI
YKR080W	MTD1______	-1.24	1147843	923967	nucleotide metabolism	NAD-dependent 5,10-methylenetetrahydrafolate dehydrogenase
YLR235C	__________	+1.03	135380	139788	unknown	unknown
YML104C	MDM1______	-1.00	153026	152823	cytoskeletal organization	intermediate filament protein
YNL020C	ARK1______	+1.14	302754	346135	unknown	protein kinase
YNR059W	MNT4______	+1.16	167924	195096	protein glycosylation	mannosyltransferase
YOR138C	__________	+1.07	244999	261174	unknown	unknown
YPL114W	__________	+1.07	153405	164825	unknown	unknown
YAL032C	PRP45_____	+1.19	198891	237507	mRNA splicing	U2, U5, U6 snRNP protein
YBR197C	__________	+1.09	237192	257475	unknown	unknown
YDR068W	DOS2______	+1.55	324754	503494	unknown	unknown
YDR435C	PPM1______	+1.50	269907	405525	protein modification	carboxymethyltransferase
YER129W	PAK1______	+1.21	125191	151014	DNA replication	protein kinase; suppresses pol. alpha mutations
YGL128C	__________	+1.36	425359	576421	unknown	unknown; similar to E. coli DnaJ and other DnaJ-like
YGR235C	__________	+1.15	3896892	4463183	unknown	unknown
YIL031W	ULP2______	+1.08	123029	133415	unknown	unknown; suppresses mif2 mutation
YJL129C	TRK1______	+1.08	436600	472995	transport	potassium permease
YKL125W	RRN3______	-1.01	406559	400816	transcription	RNA polymerase I transcription factor
YLR059C	REX2______	+1.05	502486	527274	RNA processing	RNA exonuclease
YLR429W	CRN1______	-1.02	876566	857499	cytoskeleton	coronin
YMR164C	MSS11_____	+1.41	1731298	2434824	starch metabolism	(putative) transcriptional repressor
YNL220W	ADE12_____	-1.37	4231090	3077241	purine biosynthesis	adenylosuccinate synthetase
YOL124C	__________	-1.60	882492	549905	unknown	unknown
YOR336W	KRE5______	-1.12	886178	788889	cell wall biogenesis	unknown; ER resident glycoprotein
YPR031W	__________	-1.21	633667	523315	unknown	unknown; similar to human zinc finger protein PIR:JC2069
YBR011C	IPP1______	-1.03	7629162	7372294	phosphate metabolism	inorganic pyrophosphatase, cytoplasmic
YCL032W	STE50_____	+1.18	256510	302194	signaling	pheromone response
YDL128W	VCX1______	+1.33	554570	735665	transport	vacuolar H+/Ca(2+) exchanger
YDR251W	PAM1______	+1.33	263290	349081	unknown	unknown; overexpression suppresses PP2A depletion
YEL031W	SPF1______	+1.23	118323	144993	transport	(putative) Ca(2+) ATPase
YFR048W	__________	+2.06	206386	425326	unknown	unknown
YGR049W	SCM4______	+1.03	379513	392414	cell cycle	suppresses cdc4 mutation
YHR065C	RRP3______	-1.11	559986	503625	rRNA processing	RNA helicase
YIR036C	__________	+1.13	293565	332532	unknown	unknown; similar to proteins of the short-chain alcohol
YJR095W	SFC1______	+1.11	97340	108407	transport	mitochondrial succinate-fumarate carrier
YKR092C	SRP40_____	-1.28	1174669	915093	transcription (putative)	Suppressor of mutant AC40 subunit of RNA polymerase I and III
YLR247C	__________	+1.20	507965	608097	unknown	unknown; similar to Rad16p
YML116W	ATR1______	-1.32	417691	315969	aminotriazole resistance	transporter (putative)
YNL032W	SIW14_____	+1.11	554720	616789	cell cycle	tyrosine phosphatase
YNR071C	__________	+1.02	186318	189745	unknown	unknown; similar to UDPglucose 4-epimerase
YOR148C	SPP2______	+1.16	398020	460796	mRNA splicing	spliceosome-associated protein
YPL126W	NAN1______	-1.56	1581880	1016695	unknown	unknown; nucleolar protein
YAL042W	ERV46_____	-1.39	1353417	972250	unknown	unknown; ER vesicle protein
YBR209W	__________	+1.07	134039	142994	unknown	unknown
YDR080W	VPS41_____	+1.16	349810	404267	vacuolar protein targeting	component of vacuolar membrane protein complex
YDR447C	RPS17B____	-1.02	14916994	14585884	protein synthesis	ribosomal protein S17B
YER139C	__________	+1.01	270514	274084	unknown	unknown
YGL140C	__________	-1.36	349692	256205	unknown	major facilitator superfamily
YGR247W	__________	-1.13	192237	170069	unknown	unknown
YIL043C	CBR1______	-1.15	2556459	2219938	aminosugars metabolism	cytochrome b reductase
YJL141C	YAK1______	+1.09	263575	287212	signaling	serine-threonine protein kinase
YKL137W	__________	-1.05	371418	354730	unknown	unknown
YLR071C	RGR1______	-1.11	181140	163901	transcription	RNA polymerase II mediator subunit
YLR441C	RPS1A_____	+1.04	15751270	16346183	protein synthesis	ribosomal protein S1A
YNL232W	CSL4______	-1.16	673823	582685	mitosis, chromosome segregation	unknown
YOL136C	PFK27_____	-1.03	472443	458347	fructose metabolism	6-phosphofructo-2-kinase

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YOR346W	REV1______	+1.11	194884	216185	DNA repair	deoxycytidyl transferase
YPR043W	RPL43A____	+1.11	14927190	16618231	protein synthesis	ribosomal protein L34A
YBR021W	FUR4______	+1.08	91124	98453	transport	uracil permease
YCL044C	__________	+1.21	252291	306235	unknown	unknown
YDL138W	RGT2______	+1.19	277341	330298	transport	glucose permease
YEL043W	__________	+1.09	285596	311848	unknown	unknown
YGR061C	ADE6______	-1.65	194941	118382	purine biosynthesis	5'-phosphoribosylformyl glycinamidine synthetase
YHR076W	__________	+1.02	469178	477701	unknown	unknown
YJR107W	__________	+1.16	308798	359191	unknown	unknown; similar to acylglycerol lipase
YKR104W	__________	-1.12	125715	112058	unknown	ATP-binding cassette (ABC) superfamily
YML127W	__________	-1.18	623775	530335	unknown	unknown
YNL042W	BOP3______	+1.02	335596	340692	unknown	unknown; bypass of PAM1
YOR160W	MTR10_____	-1.18	688397	585688	mRNA export	Npl3p import factor
YPL138C	__________	+1.04	389665	405799	unknown	unknown
YAL055W	PEX22_____	+1.20	239656	286428	peroxisome biogenesis (putative)	peroxisomal membrane anchoring protein (puttaive)
YBR221C	PDB1______	-1.05	1548475	1475985	glycolysis	pyruvate dehydrogenase
YDR092W	UBC13_____	+1.19	444481	529117	protein degradation, ubiquitin-mediated	E2 ub.-conjugating enzyme
YDR459C	__________	+1.10	205951	225989	unknown	unknown; similar to protein PIR:S51289
YER149C	PEA2______	-1.12	225632	201246	mating	unknown
YGL152C	__________	-1.05	176369	167975	unknown	unknown; similar to rat G protein-coupled glutamate
YGR259C	__________	-1.65	132718	80411	unknown	unknown
YIL055C	__________	+1.39	211140	292738	unknown	unknown
YJL153C	INO1______	-1.07	108180	101409	inositol biosynthesis	L-myo-inositol-1-phosphate synthase
YKL149C	DBR1______	+1.11	309486	345070	mRNA splicing	debranching enzyme
YLR083C	EMP70_____	-1.42	231024	163194	secretion (putative)	endosomal membrane protein
YLR453C	RIF2______	+1.00	167507	167968	silencing	RAP1-interacting protein
YMR186W	HSC82_____	-1.33	13959416	10524553	protein folding	chaperonin
YNL244C	SUI1______	-1.01	4808326	4749775	protein synthesis	translation initiation factor 3 (eIF3)
YOL148C	SPT20_____	-1.02	501071	490774	chromatin structure	histone acetyltransferase complex subunit
YOR358W	HAP5______	+1.11	305173	338692	respiration	transcription factor
YPR055W	SEC8______	+1.11	159512	176782	secretion	exocyst complex subunit
YBR033W	__________	+1.10	88169	97192	unknown	unknown; similar to transcription factors, has Zn[2]-Cys[6] cluster domain
YCL056C	__________	+1.14	295480	336731	unknown	unknown
YDL150W	RPC53_____	-1.18	658216	559674	transcription	RNA polymerase III 47 kD subunit
YDR271C	__________	+1.14	174807	199953	unknown	unknown
YEL055C	POL5______	-1.18	220530	186813	DNA replication	DNA polymerase V
YGR073C	__________	-1.05	220533	210654	unknown	unknown
YHR087W	__________	+2.11	232394	491206	unknown	unknown
YJR119C	__________	-1.05	159461	152329	unknown	unknown; similar to human retinoblastoma binding protein 2
YLR267W	BOP2______	+1.19	150386	178861	unknown	unknown; bypass of PAM1
YNL054W	VAC7______	-1.00	561076	559546	vacuole biogenesis	unknown; vacuolar integral membrane protein
YOR172W	__________	+1.03	119411	123165	unknown	unknown; similar to transcription factors
YPL150W	__________	-1.01	122269	120501	unknown	unknown
YAL066W	__________	+1.06	103201	109689	unknown	unknown
YBR233W	PBP2______	+1.18	214509	252161	unknown	interacts with Pab1p
YDR102C	__________	-1.03	95527	92526	unknown	unknown
YDR471W	RPL27B____	+1.08	12361662	13292014	protein synthesis	ribosomal protein L27B
YGL164C	__________	+1.06	134644	142192	unknown	unknown
YGR271W	__________	+1.11	390627	434451	unknown	unknown; similar to Ski2p
YJL165C	HAL5______	+1.10	351933	388352	salt tolerance	putative protein kinase
YKL161C	__________	+7.36	249368	1835577	unknown	putative protein kinase
YLR095C	IOC2______	+1.20	362844	433921	unknown	unknown
YLR465C	__________	-1.08	139938	129606	unknown	unknown
YMR197C	VTI1______	+1.42	533196	754609	secretion	cis-Golgi v-SNARE
YNL256W	FOL1______	-1.29	775144	599662	folate biosynthesis	dihydroneopterin aldolase, dihydro-6-hydroxymethylpterin pyrophosphokinase, dihydropteroate synthetase
YOL160W	__________	+1.03	143858	147590	unknown	unknown
YOR370C	MRS6______	-1.12	1237676	1108454	protein processing	Rab geranylgeranyltransferase regulatory subunit
YPR067W	ISA2______	+1.06	440164	466567	unknown	unknown; Iron Sulfur Assembly -- IscA/NifA homolog
YBR045C	GIP1______	-1.01	99740	99141	glucose repression	(putative) Glc7p regulatory subunit
YCL068C	__________	+1.07	122483	130849	unknown	unknown
YDL162C	__________	+1.05	118629	125108	unknown	unknown
YDR283C	GCN2______	+1.09	364455	398545	protein synthesis	eIF2alpha kinase
YEL066W	HPA3______	+1.19	406723	485882	chromatin structure	histone acetyltransferase complex subunit
YGR085C	RPL11B____	+1.04	15928759	16627774	protein synthesis	ribosomal protein L11B
YHR099W	TRA1______	-1.12	607928	541740	unknown	unknown; similar to human TR-AP
YJR131W	MNS1______	-1.04	342194	330522	protein glycosylation	specific alpha-mannosidase
YLR279W	__________	+1.12	128057	143668	unknown	unknown
YMR018W	__________	-1.00	132818	132435	unknown	unknown; similar to Pex5p/Pas10p (GB:Z49211)
YNL064C	YDJ1______	-1.04	4980505	4802473	mitochondrial and ER protein targeting	HSP70 associated chaperone
YOR184W	SER1______	-1.27	2886459	2266969	serine biosynthesis	phosphoserine
YPL162C	__________	+1.07	267765	287843	unknown	unknown
YAR018C	KIN3______	+1.04	367758	382499	unknown	protein kinase
YBR245C	ISW1______	-1.00	136423	136349	unknown	unknown; similar to Drosophila nucleosome remodeling
YDR114C	__________	+1.00	189196	189198	unknown	unknown
YDR483W	KRE2______	+1.07	2300054	2454181	protein glycosylation	alpha-1,2-mannosyltransferase
YER170W	ADK2______	+1.13	257784	290909	purine metabolism	adenylate kinase,
YGL176C	__________	-1.07	157417	147413	unknown	unknown; similar to Discopyge ommata Ca++ channel alpha1
YGR283C	__________	+1.10	528785	580881	unknown	unknown
YIL076W	SEC28_____	+1.43	1364603	1945723	secretion	vesicle coat component
YJL177W	RPL17B____	+1.13	14676808	16607904	protein synthesis	ribosomal protein L17B
YKL173W	SNU114____	+1.05	688874	724782	mRNA splicing	U5 snRNP protein
YLR107W	REX3______	+1.07	747623	799989	RNA processing	RNA exonuclease
YMR209C	__________	-1.13	727312	644669	unknown	unknown
YNL268W	LYP1______	-1.18	379114	320448	transport	lysine permease
YOR006C	__________	+1.04	637486	665111	unknown	unknown
YOR382W	__________	+1.03	430665	444394	unknown	unknown
YPR079W	__________	+1.08	727840	787081	unknown	unknown
YBR057C	MUM2______	+1.06	84930	89761	meiosis	unknown; similar to ubiquitin C-terminal hydrolase
YCLX07W	__________	+1.00	112338	112746
YDL174C	DLD1______	+1.13	689867	781494	pyruvate metabolism	D-lactate dehydrogenase
YDR295C	PLO2______	+1.14	187370	213389	unknown; ploidy-related	unknown
YEL077C	__________	+1.01	1685701	1700859	unknown	unknown
YGR097W	ASK10_____	+1.18	240827	284638	stress response	enhancer of SKN7-dependent transcription
YHR111W	__________	+1.02	839818	858394	unknown	unknown; similar to Uba1p and molybdopterin biosynthesis
YJR143C	PMT4______	-1.29	952523	741157	protein glycosylation	dolichyl phosphate-D-mannose:protein O-D-mannosyltransferase
YLR290C	__________	+1.36	294842	401955	unknown	unknown
YMR030W	__________	+1.27	175931	222572	unknown	unknown
YNL076W	MKS1______	+1.15	202011	232998	signaling, Ras pathway	negative regulator of cAMP-dependent genes
YOR194C	TOA1______	+1.10	431927	473947	transcription	TFIIA 32 kD subunit
YPL174C	NIP100____	+1.12	99852	111501	nuclear protein targeting	(putative) large subunit of dynactin complex

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YAR040C	__________	+1.08	98775	106322
YBR257W	POP4______	+1.09	232988	254798	rRNA and tRNA processing	RNase P and RNase MRP subunit
YDR126W	__________	+1.08	146547	157770	unknown	unknown
YDR495C	VPS3______	-1.00	424479	423457	vacuolar protein targeting	unknown
YER181C	__________	+1.05	279727	294410	unknown	unknown
YGL188C	__________	+1.67	219032	366584	unknown	unknown
YGR295C	COS6______	+1.45	1940265	2810801	unknown	unknown; similar to other subtelomerically-encoded proteins
YIL087C	__________	+1.26	264293	332143	unknown	unknown
YJL189W	RPL39_____	-1.05	7432568	7103704	protein synthesis	ribosomal protein L39
YKL185W	ASH1______	+1.41	1015216	1433377	mating type switching	transcription factor
YLR119W	SRN2______	+1.12	286341	321268	RNA export, putative	unknown
YMR221C	__________	+1.00	565609	567206	unknown	major facilitator superfamily
YNL280C	ERG24_____	+1.03	147988	153078	sterol metabolism	C-14 sterol reductase
YOR018W	ROD1______	+1.19	409349	488044	drug resistance	unknown
YOR394W	__________	+1.51	333955	503880	unknown	unknown; similar to PAU1 family
YPR091C	__________	+1.02	118613	121568	unknown	unknown
YBR069C	TAT1______	-1.35	622020	459165	transport	amino acid permease
YCR007C	__________	-1.05	89336	85203	unknown	unknown; similar to subtelomerically-encoded proteins
YDL186W	__________	+1.01	164847	166480	unknown	unknown
YDR307W	__________	+1.02	255211	259197	unknown	unknown; similar to Pmt1p
YER010C	__________	+1.08	338060	365909	unknown	unknown
YGR109C	CLB6______	+1.13	174873	196853	cell cycle	B-type cyclin; S phase
YHR123W	EPT1______	-1.14	82418	72001	phospholipid metabolism	sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferase
YJR155W	AAD10_____	+1.03	410057	421461	unknown	hypothetical aryl-alcohol dehydrogenase
YLR302C	__________	-1.03	132560	128811	unknown	unknown
YMR041C	__________	+1.37	208761	286568	unknown	unknown
YNL088W	TOP2______	+1.02	90034	91968	DNA replication	DNA topoisomerase II
YOR206W	__________	-1.02	94630	92427	unknown	unknown
YPL185W	__________	+1.03	132331	136313	unknown	unknown
YBL006C	__________	+1.06	433211	459609	unknown	unknown
YBR269C	__________	+1.50	309078	464020	unknown	unknown
YDL008W	APC11_____	+1.06	98844	104348	mitosis	anaphase promoting complex subunit
YDR138W	HPR1______	+1.08	106398	114381	mitosis, recombination	related to topoisomerase
YDR507C	GIN4______	+1.13	704993	797166	cell cycle (growth inhibitor)	protein kinase
YFL006W	__________	+1.19	472655	564601	unknown	unknown
YGL200C	EMP24_____	+1.17	2419377	2832695	secretion	vesicle coat component
YIL099W	SGA1______	-1.01	116970	115256	sporulation	glucan 1,4-alpha-glucosidase
YJL201W	ECM25_____	+1.06	252704	267609	cell wall biogenesis	unknown
YKL197C	PEX1______	+1.06	207961	220383	peroxisome biogenesis	ATPase (putative)
YLR131C	ACE2______	+1.06	105113	111493	transcription	CUP1 regulator
YML008C	ERG6______	-1.03	3498400	3383162	sterol metabolism	S-adenosyl-methionine delta-24-sterol-c-methyltransferase
YMR233W	__________	-1.06	567701	535828	unknown	unknown; similar to Bud7p
YNL290W	RFC3______	-1.06	569155	538311	DNA replication	replication factor C 40 kD subunit
YOR030W	DFG16_____	-1.10	139404	126443	invasive growth	unknown
YPL008W	CHL1______	-1.11	147198	133170	mitosis	kinetochore protein, DEAH box family
YPR103W	PRE2______	-1.07	69120	64363	protein degradation	20S proteasome subunit (beta5)
YBR081C	SPT7______	+1.24	157485	195335	chromatin structure	histone acetyltransferase complex subunit
YCR019W	MAK32_____	+1.37	170414	233776	dsRNA virus propagation	unknown
YDL198C	YHM1______	+1.11	510183	567099	transport	mitochondrial carrier family
YDR317W	__________	+1.23	163378	201310	unknown	unknown
YER020W	GPA2______	+1.24	313333	387017	signaling	G protein alpha subunit
YGL008C	PMA1______	+1.02	7227262	7352097	H+ homeostasis	plasma membrane H+-ATPase
YGR119C	NUP57_____	-1.02	708481	697503	nuclear protein targeting	nuclear pore protein
YHR134W	__________	+1.07	287684	309053	unknown	unknown
YJL008C	CCT8______	-1.11	1780870	1603699	protein folding	cytoplasmic chaperonin complex
YKL007W	CAP1______	+1.42	912755	1298970	cytoskeleton	actin capping protein subunit
YLL008W	DRS1______	-1.22	855173	701235	rRNA processing	RNA helicase
YLR313C	SPH1______	-1.04	129470	124304	bud site selection, bipolar	unknown; interacts with MAPKKs
YMR051C	__________	-1.80	7435916	4129877	unknown	unknown
YNL100W	__________	+1.10	445239	488409	unknown	unknown
YOL008W	__________	-1.11	320939	288700	unknown	unknown
YOR218C	__________	-1.14	631476	552965	unknown	unknown
YPL197C	__________	+1.09	956366	1045470	unknown	unknown
YBL018C	POP8______	+1.12	286741	322407	tRNA processing	RNase P and RNase MRP subunit
YBR281C	__________	+1.22	135109	165119	unknown	unknown
YDL020C	RPN4______	+1.59	528592	837981	protein degradation, ubiquitin-mediated	26S proteasome subunit
YDR150W	NUM1______	+1.16	98135	114060	mitosis, nuclear migration	unknown
YDR519W	FKB2______	+1.38	594390	818022	protein folding	peptidyl-prolyl cis-trans isomerase
YFL015C	__________	+1.54	108251	167044	unknown	unknown
YGL212W	VAM7______	+1.09	126919	138384	vacuole biogenesis	unknown; regulator
YHL016C	DUR3______	+1.15	138591	159417	transport	urea permease
YIL110W	__________	-1.16	613224	527810	unknown	unknown
YJL213W	__________	-1.26	243259	193020	unknown	unknown; similar to Nocardia aryldialkylphosphatase
YKL209C	STE6______	+1.08	107516	116027	mating	a-factor exporter (ABC superfamily)
YLR143W	__________	+1.00	260962	262233	unknown	unknown; similar to Mmd1p
YNL302C	RPS19B____	-1.03	15723013	15298821	protein synthesis	ribosomal protein S19B
YOR042W	__________	+1.01	889616	897260	unknown	unknown
YPL020C	ULP1______	+1.08	318862	344301	protein degradation	Ubl (ubiquitin-like protein) - specific protease
YPR115W	__________	+1.01	116846	117451	unknown	unknown
YBR091C	MRS5______	+1.22	89028	108734	mitochondrial protein targeting	inner membrane carrier protein
YCR029C	RIM1______	+1.38	125387	172826
YDL210W	UGA4______	+1.42	111044	157777	transport	GABA-specific permease
YDR329C	PEX3______	+1.08	241514	259992	peroxisomal protein targeting	integral membrane protein
YER032W	FIR1______	+1.22	229219	280619	mRNA 3'-end processing	unknown
YGL020C	__________	+1.24	541747	670104	unknown	unknown
YGR131W	__________	+1.24	129482	160915	unknown	unknown
YHR144C	DCD1______	+1.00	632214	633359	pyrimidine metabolism	deoxycytidylate deaminase
YJL020C	__________	+1.13	199393	226024	unknown	unknown
YKL019W	RAM2______	-1.05	569067	542298	protein processing	protein farnesyltransferase, alpha subunit
YLL020C	__________	+1.14	132775	151379	unknown	unknown
YLR325C	RPL38_____	-1.00	14388321	14337368	protein synthesis	ribosomal protein L38
YNL112W	DBP2______	-2.04	5877313	2886320	mRNA decay	RNA helicase
YOL020W	TAT2______	-1.13	988605	871954	transport	tryptophan permease
YOR230W	WTM1______	+1.01	2872384	2892660	meiosis	transcription factor
YPL209C	IPL1______	-1.09	206589	189067	mitosis, chromosome segregation	protein kinase
YBL030C	PET9______	+1.43	2155414	3091995	transport	mitochondrial ADP/ATP translocator
YBR293W	__________	+1.21	200371	241513	unknown	major facilitator superfamily
YDL032W	__________	+1.28	106113	136225	unknown	unknown
YDR162C	NBP2______	+1.36	223157	304095	unknown	interacts with Nap1p
YDR531W	__________	+1.13	500348	564493	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YFL025C	BST1______	+1.30	148437	193293	secretion	negative regulator of COPII vesicle formation
YGL224C	__________	+1.24	400535	495894	unknown	unknown
YHL028W	WSC4______	-1.01	225660	222557	cell wall integrity and stress response	unknown
YIL122W	__________	+1.46	148579	216418	unknown	unknown
YJR001W	__________	+1.22	646743	789595	unknown	major facilitator superfamily
YKL221W	__________	+1.20	116367	139613	unknown	unknown; similar to mammalian monocarboxylate
YLR155C	ASP3-1____	+1.29	2028423	2623249	asparagine utilization	L-asparaginase II
YML029W	__________	-1.06	281857	265955	unknown	unknown
YMR257C	PET111____	+1.05	205572	215095	protein synthesis	translation activator of COX2
YNL314W	DAL82_____	+1.00	263632	264459	transcription	activator of allantoin catabolic genes
YOR054C	__________	+1.06	859481	907309	unknown	unknown
YPL032C	SVL3______	-1.06	244862	230472	unknown	unknown; styryl dye vacuolar localization
YPR127W	__________	+1.06	412057	435776	unknown	unknown; similar to auxin-induced protein PIR:S16390
YBR103W	SIF2______	+1.10	255765	280673	silencing (telomere)(putative)	unknown
YCR040W	MATALPHA1_	+1.15	111486	127943	transcription	alpha-specific gene activator
YDL222C	__________	+1.17	132725	155120	unknown	unknown; similar to Sur7p
YDR341C	__________	-1.22	1603402	1314560	protein synthesis	tRNA synthetase, arginine
YER043C	SAH1______	-1.36	4190810	3085593	methionine biosynthesis	S-adenosyl-L-homocysteine hydrolase
YGL032C	AGA2______	+1.05	124913	130579	mating	a-agglutinin binding subunit
YGR143W	SKN1______	+1.23	151073	185096	cell wall biogenesis	(1->6)-beta-glucan synthase subunit
YHR156C	__________	+1.18	165235	194261	unknown	unknown
YJL032W	__________	+1.49	279836	417111	unknown	unknown
YKL031W	__________	+1.08	102667	111167	unknown	unknown
YLL032C	__________	+1.16	329729	383361	unknown	unknown
YLR337C	VRP1______	+1.17	1440869	1684838	cytoskeleton	verprolin
YMR074C	__________	-1.06	1719502	1619770	unknown	unknown
YNL124W	__________	-1.34	1020424	763603	unknown	unknown
YOL032W	__________	+1.12	309450	347922	unknown	unknown
YOR242C	SSP2______	-1.00	231891	231733	sporulation	unknown; similar to class II family of aminoacyl-tRNA synthetases
YPL221W	BOP1______	+1.70	546068	929157	unknown	unknown; bypass of PAM1
YBL042C	FUI1______	-1.20	372961	311435	transport	uridine permease
YDL044C	MTF2______	+1.07	97467	104347	mRNA splicing, mitochondrial	unknown
YDR172W	SUP35_____	-1.07	1327775	1239280	protein synthesis	translation release factor
YDR543C	__________	+1.15	126221	145513	unknown	unknown; similar to other subtelomerically-encoded proteins
YFL035C	__________	+1.32	399431	525905
YGL235W	__________	-1.28	117621	91840	unknown	unknown
YHL039W	__________	-1.15	501430	436688	unknown	unknown
YIL134W	FLX1______	-1.08	339765	314052	transport	FAD mitochondrial carrier
YJR012C	__________	-1.02	280954	274171	unknown	unknown
YKR008W	RSC4______	-1.06	449277	422832	chromatin structure	chromatin remodeling complex subunit
YLR165C	__________	+1.08	208894	225163	unknown	unknown
YMR269W	__________	-1.22	420751	344967	unknown	unknown
YNL326C	__________	+1.07	289412	308827	unknown	unknown; similar to Akr1p and Ydr126p
YOR066W	__________	+1.09	266396	290096	unknown	unknown
YPL044C	__________	-1.98	337538	170638	unknown	unknown
YBR114W	RAD16_____	+1.24	176318	217928	DNA repair, nucleotide excision	NEF4 component
YCR052W	RSC6______	-1.11	484599	436254	chromatin structure	chromatin remodeling complex subunit
YDL234C	GYP7______	+1.52	155542	236843	vacuole inheritance	GTPase-activating protein for Ypt7p
YDR353W	TRR1______	-1.11	2329225	2107624	pyrimidine metabolism	thioredoxin reductase
YER053C	__________	+1.54	302920	466697	unknown	unknown; similar to C. elegans mitochondrial phosphate
YGL044C	RNA15_____	+1.26	307421	387857	mRNA 3'-end processing	cleavage/polyadenylation factor CF I component
YGR155W	CYS4______	-1.40	4036748	2879967	methionine biosynthesis	cystathionine beta-synthase
YHR168W	__________	-1.31	202240	154893	unknown	unknown
YJL045W	__________	-1.00	172159	171368	unknown	unknown; similar to succinate dehydrogenase flavoprotein
YKL042W	SPC42_____	-1.28	99410	77408	cytoskeleton	spindle pole body component
YLL044W	__________	-1.29	9802317	7621746	unknown	unknown
YLR349W	__________	-1.83	429699	235260	unknown	unknown
YNL136W	__________	+1.05	438030	458531	unknown	unknown; similar to mature-parasite-infected
YOL044W	PEX15_____	+1.07	196530	210615	peroxisome biogenesis	integral membrane protein
YOR254C	SEC63_____	-1.19	2278190	1919482	secretion	ER protein translocation subcomplex subunit
YPL233W	__________	-1.03	302821	293372	unknown	unknown
YBL054W	__________	-1.05	135475	128967	unknown	unknown
YDL056W	MBP1______	+1.29	259749	335535	cell cycle	transcription factor
YDR183W	PLP1______	+1.25	229079	285311	unknown	unknown; similar to phosducin
YFL047W	__________	+1.07	189678	202800	unknown	unknown; similar to Rga2p
YGL247W	__________	+1.10	234121	257767	unknown	unknown
YHL050C	__________	-1.27	4056995	3199891	unknown	unknown; similar to other subtelomerically-encoded proteins
YIL146C	ECM37_____	+1.08	166389	180188	cell wall biogenesis	unknown
YJR024C	__________	-1.21	727864	601064	unknown	unknown
YKR020W	__________	+1.07	291168	311790	unknown	unknown
YLR177W	__________	+1.48	784178	1160048	unknown	unknown
YML048W	GSF2______	-1.08	546787	504175	glucose repression	unknown
YMR281W	GPI12_____	+1.15	305257	352479	protein processing (putative)	N-acetylglucosaminylphosphatidylinositol de-N-acetylase
YNL338W	__________	+1.27	244536	309601	unknown	unknown
YOR078W	__________	-1.08	1036178	960880	unknown	unknown
YPL056C	__________	+1.05	260952	274980	unknown	unknown
YPR149W	NCE102____	-1.06	93306	87752	secretion, non-classical	unknown
YBR126C	TPS1______	+1.69	830200	1403466	trehalose metabolism	trehalose-6-phosphate synthas
YCR064C	__________	+1.12	162506	182811	unknown	unknown
YDL246C	__________	+1.29	187484	242026	unknown	unknown; similar to Sor1p (SOR1 and YDL246C code for nearly
YDR365C	__________	-1.25	1028587	819647	unknown	unknown
YER063W	THO1______	+1.11	805477	896619	transcription (putative)	unknown
YGL056C	SDS23_____	-1.00	469062	467768	unknown	unknown; similar to S. pombe sds23
YGR163W	GTR2______	+1.20	467851	561786	signaling (putative)	small GTPase (putative)
YHR180W	__________	+1.19	167031	199214	unknown	unknown
YJL057C	IKS1______	+1.31	281003	367632	signaling (putative)	protein kinase
YKL054C	VID31_____	+1.07	800618	857206	vacuolar protein targeting (putative)	unknown
YLL056C	__________	-1.06	1246767	1181163	unknown	unknown; similar to Y. pseudotuberculosis CDP-3,
YLR361C	__________	+1.06	332123	351882	unknown	unknown
YMR096W	SNZ1______	+1.09	302777	330622	unknown	unknown; induced in stationary phase
YNL148C	ALF1______	-1.11	123452	111546	protein folding	alpha-tubulin foldin
YOL054W	__________	+1.01	439615	443320	unknown	unknown
YOR266W	PNT1______	-1.05	405005	386378	pentamidine resistance	unknown
YPL245W	__________	-1.40	642393	460230	unknown	unknown
YBL066C	SEF1______	+1.01	98806	99545	transcription	(putative) transcription factor
YDL068W	__________	+1.02	143720	146090	unknown	unknown
YDR195W	REF2______	+1.03	154143	158340	mRNA 3'-end processing	unknown
YFL059W	SNZ3______	+1.01	295703	297207	unknown	unknown; induced in stationary phase
YGL259W	YPS5______	+1.06	116810	123693	protein degradation	GPI-anchored aspartic protease
YHR010W	RPL27A____	+1.06	15797372	16672210	protein synthesis	ribosomal protein L27A

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YIL157C	__________	+1.09	523960	573605	unknown	unknown
YJR035W	RAD26_____	+1.01	317577	320549	DNA repair	putative helicase
YKR032W	__________	-1.01	110557	109800	unknown	unknown
YLR189C	UGT51_____	+1.11	165491	184131	sterol metabolism	UDP-glycosyltransferases
YML059C	__________	-1.02	714454	699289	unknown	unknown
YNR011C	PRP2______	-1.14	412338	362029	mRNA splicing	RNA helicase, putative
YOR090C	PTC5______	+1.02	426245	435909	unknown	protein phosphatase type 2C
YPL066W	__________	+1.36	558170	761642	unknown	unknown
YBR138C	HDR1______	+1.35	164730	222215	meiosis	unknown
YCR075C	ERS1______	+1.27	218369	276797	secretion (putative)	unknown; suppresses erd1 mutation
YDR010C	__________	+1.13	109303	123539	unknown	unknown
YDR375C	BCS1______	+1.14	251106	287152	respiration	cyt. c iron-sulfur subunit expression
YER072W	NRF1______	-1.12	6347770	5680996	signaling, polarized growth (putative)	negative regulator of Cdc42p
YGL068W	__________	+1.08	937259	1015149	unknown	unknown; similar to ribosomal proteins
YGR175C	ERG1______	-1.18	3290836	2787405	sterol metabolism	squalene monooxygenase
YHR192W	__________	+1.06	521588	551208	unknown	unknown
YJL069C	__________	-1.52	701373	460117	unknown	unknown
YKL066W	__________	-1.05	91773	87471	unknown	unknown
YLR001C	__________	+1.20	543461	654267	unknown	unknown
YLR373C	VID22_____	-1.03	257792	249372	vacolar protein targeting (putative)	unknown
YMR108W	ILV2______	-1.49	1947308	1307840	isoleucine and valine biosynthesis	acetolactate synthase
YNL160W	YGP1______	+3.09	727456	2250964	diauxic shift	unknown; response to nutrient limitation
YOL066C	RIB2______	+1.06	312877	331869	riboflavin biosynthesis	DRAP deaminase
YOR278W	HEM4______	+1.20	314365	376408	heme biosynthesis	uroporphyrinogen III synthase
YPL256C	CLN2______	+1.46	829569	1213789	cell cycle	G1/S cyclin
YMR323W	__________	-1.10	235489	213579	unknown	unknown; similar to enolases (phosphopyruvate hydratase)
YBL078C	AUT7______	+2.20	182794	402699	autophagy	microtubule-associated protein (putative)
YDL080C	THI3______	+1.08	157596	170282	thiamine metabolism	alpha-ketoisocaproate carboxylase
YDR207C	UME6______	+1.10	214891	237254	meiosis	transcription factor
YFR003C	__________	+1.36	364962	497609	unknown	unknown
YGR008C	STF2______	+1.68	360141	605129	ATP synthesis	ATPase stabilizing factor
YIL169C	__________	-1.02	1294854	1270813	unknown	unknown
YJR047C	ANB1______	-1.14	7811097	6831024	protein synthesis	translation initiation factor eIF5A
YKR044W	__________	+1.09	463774	505618	unknown	unknown
YLR201C	__________	+1.41	362769	510387	unknown	unknown
YML071C	__________	+1.29	485719	625482	unknown	unknown
YMR303C	ADH2______	+1.04	16008005	16583004	glycolysis	alcohol dehydrogenase II
YNR023W	SNF12_____	-1.26	717707	567737	transcription	component of SWI/SNF global activator complex
YOR102W	__________	+1.13	829570	938070	unknown	unknown
YPL078C	ATP4______	+1.27	1709687	2171637	ATP synthesis	ATPase; F0-ATP synthase subunit 4
YPR169W	__________	-1.27	2083232	1634486	unknown	unknown
YBR150C	TBS1______	+1.34	217473	291822	drug resistance (putative)	unknown; similar to transcription factors, has Zn[2]-Cys[6]
YDR022C	CIS1______	+1.26	161165	202989	microtubule assembly	cik1 suppressor
YDR387C	__________	+1.32	190890	252827	unknown	unknown; similar to Itr1p and Itr2p
YER084W	__________	+1.09	123199	134686	unknown	unknown
YGL080W	__________	+1.34	308549	413887	unknown	unknown
YGR187C	HGH1______	-1.30	1117579	857593	unknown	unknown; similar to human Hmg1p and Hmg2p
YHR204W	__________	-1.21	314232	260031	unknown	unknown; similar to alpha-mannosidase and other glycosyl
YJL081C	ARP4______	-1.27	648148	511852	cytoskeleton	actin-related protein
YKL078W	__________	-1.41	196710	139131	unknown	putative RNA helicase
YLR013W	GAT3______	-1.07	98883	92087	transcription (putative)	DNA binding protein, GATA family
YLR385C	__________	-1.04	78429	75079	unknown	unknown
YNL172W	APC1______	-1.05	94185	89903	mitosis	anaphase-promoting complex subunit
YOL078W	__________	+1.04	125490	130004	unknown	unknown
YOR290C	SNF2______	-1.06	1235409	1160339	transcription	component of SWI/SNF global activator complex
YPL266W	DIM1______	-1.29	1236720	957240	rRNA processing, 18S	dimethyladenosine transferase
YBL090W	MRP21_____	+1.11	373222	414358	protein synthesis	ribosomal protein, mitochondrial
YDL092W	SRP14_____	+1.00	798885	800697	secretion	signal recognition particle subunit
YDR215C	__________	+1.03	140048	144445	unknown	unknown
YFR015C	GSY1______	+1.26	230516	290723	glycogen metabolism	glycogen synthase
YGR020C	VMA7______	-1.17	1012666	863600	vacuolar acidification	vacuolar H+-ATPase V1 domain 14 kDa subunit
YHR033W	__________	-1.02	115069	113144	unknown	unknown; similar to Pro1p
YIR003W	__________	-1.07	384725	360059	unknown	unknown; similar to E. coli and Bacillus subtilis MinD, has
YJR059W	PTK2______	+1.13	381891	430519	polyamine transport	ser/thr protein kinase
YKR056W	RNC1______	-1.32	669187	505850	unknown	endo-exonuclease
YLR213C	CRR1______	-1.13	216852	191524	unknown	unknown; sporulation specific, related to Crh1p
YML083C	__________	+1.34	204113	274197	unknown	unknown
YMR313C	__________	+1.00	556288	557378	unknown	unknown
YNR035C	ARC35_____	+1.25	1415384	1763875	cytoskeleton	cortical actin patch integrity
YOR114W	__________	-1.00	341529	340287	unknown	unknown
YPL090C	RPS6A_____	-1.03	16008005	15557173	protein synthesis	ribosomal protein S6A
YPR181C	SEC23_____	-1.04	169464	162432	secretion	vesicle coat component
YBR162C	__________	+1.12	3824001	4284456	unknown	unknown; similar to Aga1p
YCR098C	GIT1______	+1.07	212864	228249	unknown	unknown; similar to phosphate transporter
YDR034C	LYS14_____	+1.07	435447	463817	lysine biosynthesis	transcription factor
YDR399W	HPT1______	-1.45	1809739	1248566	purine biosynthesis	hypoxanthine guanine phosphoribosyl transferase
YER094C	PUP3______	+1.14	1385642	1572958	protein degradation	20S proteasome subunit (beta3
YGL092W	NUP145____	-1.20	694461	577307	nuclear protein targeting	nuclear pore protein
YGR199W	PMT6______	-1.03	501989	485428	protein glycosylation	putative O-mannosyltransferase
YJL093C	TOK1______	+1.02	378947	386731	transport	outward-rectifier potassium channel
YKL090W	__________	-1.00	66477	66336	unknown	unknown
YLR025W	SNF7______	+1.05	825865	871092	glucose derepression	unknown
YLR397C	AFG2______	-1.17	289254	246876	unknown	(putative) AAA ATPase
YMR131C	RSA2______	-1.73	1412841	814898	ribosome biogenesis	unknown
YNL184C	__________	-1.04	201624	193861	unknown	unknown
YOL090W	MSH2______	-1.01	97525	96556	DNA repair	MutS homolog; mismatch repair
YOR301W	RAX1______	-1.11	203687	183946	cell polarity (putative)	unknown
YPL278C	__________	-1.00	96966	96687	unknown	unknown
YAL010C	MDM10_____	+1.23	134715	165783	mitochondrial biogenesis	(putative) component of actin binding protein complex
YBR174C	__________	-1.04	152529	147195	unknown	unknown
YCRX04W	__________	+1.05	367398	386038
YDR045C	RPC11_____	+1.09	440312	478580	transcription	RNA polymerase III subunit C11
YDR412W	__________	-1.08	556472	514453	unknown	unknown
YER107C	GLE2______	+1.14	493101	562765	nuclear protein targeting	nuclear pore protein
YGL105W	ARC1______	-1.10	2345039	2132113	tRNA aminoacylation	G4 nucleic acid binding protein
YGR212W	__________	+1.01	106156	107395	unknown	unknown
YIL009W	FAA3______	-1.21	612987	508210	fatty acid metabolism	acyl CoA synthase
YJL106W	IME2______	+1.12	126003	141543	signaling, meiosis pathway	serine/threonine protein kinase
YKL102C	__________	+1.36	100948	137545	unknown	unknown; similar to potato lipoxygenase
YLR036C	__________	+1.13	195974	221188	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YLR410W	VIP1______	-1.01	78784	78077	unknown	unknown
YNL197C	WHI3______	-1.02	160202	156779	cell size	unknown
YOL103W	ITR2______	-1.06	655914	618621	transport	inositol permease
YOR313C	SPS4______	+1.37	164745	226357	sporulation	putative cell wall component
YPR008W	__________	-1.12	67465	60224	unknown	unknown; similar to Cup2p and Candida albicans
YBL101W	__________	+1.34	106690	143306	unknown	unknown
YCL008C	STP22_____	+1.13	191119	215936	vacuolar protein targeting	unknown; similar to Tsg101 tumor susceptibility gene
YDL105W	QRI2______	+1.34	138152	185400	unknown	unknown
YDR228C	PCF11_____	+1.48	381967	566868	mRNA 3'-end processing	cleavage/polyadenylation factor CF I component
YEL009C	GCN4______	+1.11	5796332	6429015	amino acid, purine biosynthesis	transcription factor
YFR028C	CDC14_____	+1.18	501320	592785	mitosis	protein phosphatase
YGR031W	__________	-1.15	282442	244921	unknown	unknown
YHR045W	__________	+1.01	446343	450641	unknown	unknown
YIR016W	__________	+1.17	468771	547747	unknown	unknown
YJR072C	__________	-1.30	752720	579401	unknown	unknown
YKR069W	MET1______	+1.07	240556	258396	methionine biosynthesis	siroheme synthase
YLR226W	BUR2______	+1.08	262705	284736	unknown	unknown
YML095C	RAD10_____	+1.02	231220	236262	DNA repair	ssDNA endonuclease
YNL009W	IDP3______	-1.01	138966	137560	TCA cycle	isocitrate dehydrogenase
YNR048W	__________	-1.15	85605	74548	unknown	unknown
YOR127W	RGA1______	+1.19	569017	677464	bud site selection	putative GTPase-activating protein (GAP) for Cdc42p or Rho1p
YPL103C	__________	+1.01	309722	313615	unknown	unknown
YPR194C	__________	+1.28	488134	626524	unknown	sexual differentiation protein family
YAL022C	FUN26_____	+1.19	274775	326518	unknown	unknown
YBR186W	PCH2______	+1.10	111920	123614	meiosis, checkpoint	unknown
YCRX16C	__________	-1.22	1080880	888297
YDR057W	__________	+1.32	279428	367832	unknown	unknown
YDR424C	DYN2______	+1.40	407789	570691	cytoskeleton	dynein light chain
YER119C	__________	+1.32	341299	450541	unknown	unknown
YGL117W	__________	+1.08	209882	225793	unknown	unknown
YGR224W	AZR1______	+1.14	142352	161927	drug resistance (putative)	unknown; major facilitator superfamily
YIL020C	HIS6______	-1.33	687121	518569	histidine biosynthesis	Phosphoribosyl imidazolecarboxamide isomerase
YJL118W	__________	+1.18	132638	155999	unknown	unknown
YKL114C	APN1______	+1.01	675639	684204	DNA repair	apurinic/apyrimidinic endonuclease
YLR048W	RPS0B_____	+1.06	15768592	16709841	protein synthesis	ribosomal protein S0B
YLR420W	URA4______	-1.32	2186097	1661992	pyrimidine biosynthesis	dihydrooratase
YMR154C	RIM13_____	+1.01	202369	203417	sporulation	proteolytic processing of Rim1p
YNL209W	SSB2______	-1.00	15825504	15757812	translation	cytosolic HSP70
YOL113W	SKM1______	+1.33	344894	459523	unknown	protein kinase
YOR325W	__________	-1.35	198069	147040	unknown	unknown
YPR020W	ATP20_____	+1.12	552823	620688	ATP synthesis	mitochondrial ATP synthase subunit
YBL113C	__________	+1.25	2800813	3511539	unknown	unknown
YCL021W	__________	+1.37	848749	1165377
YDL117W	CYK3______	+1.33	300409	398170	cytokinesis (putative)	unknown
YEL020C	__________	+1.29	199247	257077	unknown	unknown; similar to oxalyl-CoA decarboxylase from
YFR037C	RSC8______	+1.16	969343	1126598	chromatin structure	chromatin remodeling complex subunit
YHR056C	__________	+1.04	1391911	1454406	unknown	putative transcriptional regulator
YIR025W	__________	+1.23	246465	301960	unknown	unknown
YJR085C	__________	+1.29	1063044	1369734	unknown	unknown
YKR081C	__________	-1.36	1368500	1003997	unknown	unknown
YLR236C	__________	+1.15	152007	174772	unknown	unknown
YML105C	SEC65_____	-1.05	1043502	989524	secretion	signal recognition particle subunit
YNL021W	HDA1______	-1.13	197701	175131	chromatin structure	histone deacetylase
YNR060W	FRE4______	-1.01	176973	175413	unknown	unknown; similar to ferric reductases Fre1p and Fre2p
YOR139C	__________	-1.09	134706	123229	unknown	unknown
YPL115C	BEM3______	-1.15	90030	78597	bud emergence	GTPase-activating protein for Cdc42p
YAL033W	POP5______	+1.17	246810	288272	tRNA processing	RNase P and RNase MRP subunit
YBR198C	TAF90_____	+1.25	277628	348017	transcription	TFIID 90 kD subunit
YDR069C	DOA4______	+1.22	260994	317511	protein degradation, ubiquitin-mediated	ubiquitin-specific protease
YDR436W	PPZ2______	+1.36	206618	281420	stress response	ser/thr phosphatase
YER130C	__________	+1.52	327058	497303	unknown	unknown
YGL129C	__________	+1.07	94686	101782	unknown	unknown; similar to crayfish 1,3-beta-D-glucan-binding
YGR236C	__________	+1.22	150515	184045	unknown	unknown
YIL032C	__________	+1.13	149222	168617	unknown	unknown
YJL130C	URA2______	-1.06	13922331	13096437	pyrimidine biosynthesis	carbamoyl-phophate synthetase, aspartate transcarbamylase, and glutamine amidotransferase
YKL126W	YPK1______	+1.26	667324	838593	unknown	protein kinase
YLR060W	FRS1______	-1.34	2378546	1779342	protein synthesis	tRNA synthetase, phenylalanyl, subunit
YLR430W	SEN1______	-1.03	883925	860014	tRNA splicing	RNA helicase, putative
YMR165C	SMP2______	-1.01	159714	158857	respiration; plasmid maintenance	unknown
YNL221C	POP1______	-1.30	842236	646875	rRNA and tRNA processing	RNase P and RNase MRP subunit
YOL125W	__________	-1.34	483213	361767	unknown	unknown
YOR337W	TEA1______	-1.06	186011	174875	transcription	Ty1 enhancer activator
YPR032W	SRO7______	-1.10	107541	97398	signaling (putative)	suppresses rho3 mutant
YBR012C	__________	-1.42	313751	220892	unknown	unknown
YCL033C	__________	+1.40	418378	587420	unknown	unknown; similar to Neisseria pilin
YDL129W	__________	+1.17	140859	165435	unknown	unknown
YDR252W	BTT1______	+1.19	116031	137884	transcription	negative regulator of RNA polymerase II
YEL032W	MCM3______	+1.20	102151	122730	DNA replication	MCM initiator complex
YFR049W	YMR31_____	+1.48	370289	547815	protein synthesis	ribosomal protein, mitochondrial
YGR050C	__________	+1.07	124245	132460	unknown	unknown
YHR066W	SSF1______	-1.24	901866	728510	mating (putative)	unknown
YIR037W	HYR1______	+1.33	1193585	1583976	oxidative stress response	glutathione peroxidase
YJR096W	__________	+1.33	198368	264418	unknown	unknown; similar to aldolase reductase
YKR093W	PTR2______	+1.04	757363	790842	transport	small peptide permease
YLR248W	RCK2______	+1.08	706460	765179	unknown	Ca/calmodulin-dependent protein kinase
YNL033W	__________	-1.05	138878	131861	unknown	unknown
YNR072W	HXT17_____	-1.01	182908	181987	transport	hexose permease
YOR149C	SMP3______	-1.06	264682	249884	plasmid maintenance	integral membrane, protein kinase C pathway protein
YPL127C	HHO1______	+1.12	1338914	1496166	chromatin structure	histone H1
YBR210W	__________	+1.21	284598	344428	unknown	unknown
YDR081C	PDC2______	+1.11	153559	170844	glycolysis	regulator of pyruvate decarboxylase genes
YDR448W	ADA2______	+1.10	137558	151181	chromatin structure	histone acetyltransferase complex subunit
YER140W	__________	+1.16	173577	201218	unknown	unknown
YGL141W	HUL5______	-1.07	80159	74826	protein degradation, ubiquitin mediated	ubiquitin-protein ligase (E3)
YGR248W	SOL4______	+1.35	132655	179712	unknown	unknown; similar to Sol3p
YIL044C	AGE2______	-1.11	480623	433845	secretion	GTPase activating protein for ARFs
YJL142C	__________	+1.29	332198	427814	unknown	unknown
YKL138C	MRPL31____	+1.03	371424	382122	protein synthesis	ribosomal protein, mitochondrial L31
YLR072W	__________	+1.02	159153	162438	unknown	unknown
YLR442C	SIR3______	+1.02	523238	536007	silencing	nuclear protein, reulator of silencing at HML, HMR, telomeres

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YNL233W	BNI4______	-1.05	403413	385493	cytokinesis	may link chitin synthase to septins
YOL137W	__________	-1.02	357040	349366	unknown	major facilitator superfamily
YOR347C	PYK2______	+1.12	338469	377839	glycolysis	pyruvate kinase
YPR044C	__________	+1.03	15953865	16508957	unknown	unknown
YBR022W	__________	+1.25	280836	349715	unknown	unknown
YCL045C	__________	+1.14	812473	924910	unknown	unknown
YDL139C	SCM3______	+1.41	161278	227962	mitosis, chromosome segregation (putative)	unknown
YEL044W	__________	+1.08	178512	192518	unknown	unknown
YGR062C	COX18_____	+1.03	202682	208999	respiration	required for activity of mitochondrial cytochrome oxidase
YHR077C	NMD2______	-1.01	325454	323183	mRNA decay, nonsense-mediated	Nam7p/Upf1p-interacting protein
YJR108W	ABM1______	-1.04	112695	108536	cytoskeleton (putative)	unknown
YKR105C	__________	-1.22	193251	158170	unknown	major facilitator superfamily
YLR257W	__________	+1.11	1428898	1588441	unknown	unknown
YML128C	__________	+1.54	304081	466909	unknown	unknown
YNL043C	__________	+1.21	1036731	1259516	unknown	unknown
YOR161C	__________	+1.06	407381	433251	unknown	unknown
YPL139C	UME1______	-1.01	348114	344337	meiosis	transcription factor
YBR222C	FAT2______	+1.36	186282	254172	transport	peroxisomal (putative) fatty acid transporter
YDR093W	__________	+1.10	3112102	3410818	unknown	unknown; similar to members of Drs2p family of P-type
YDR460W	TFB3______	+1.17	240306	281733	transcription	TFIIH 38 kD subunit
YER150W	SPI1______	+2.12	248442	525729	unknown	unknown; similar to Sed1p; induced in stationary phase
YGL153W	PEX14_____	+1.03	229681	235876	peroxisomal protein targeting	peroxisomal import machinery component
YGR260W	TNA1______	-1.48	1218742	820749	transport	nicotinic acid permease
YIL056W	__________	+1.01	278420	281847	unknown	unknown
YJL154C	VPS35_____	+1.20	354895	426053	vacuolar protein targeting	peripheral membrane protein
YKL150W	MCR1______	+1.57	604073	947829	electron carrier	cytochrome-b5 reductase
YLR084C	RAX2______	-1.13	497751	440433	cell polarity (putative)	unknown
YLR454W	__________	-1.76	6471540	3674527	unknown	unknown
YMR187C	__________	-1.09	253596	233170	unknown	unknown
YNL245C	__________	-1.01	520724	514145	unknown	unknown
YOL149W	DCP1______	+1.11	644223	712225	mRNA decay	decapping enzyme
YOR359W	__________	+1.01	173279	174409	unknown	unknown
YPR056W	TFB4______	+1.03	348695	360124	transcription	TFIIH 37 kD subunit
YBR034C	HMT1______	-1.03	891928	868879	protein processing	arginine methyltransferase
YCL057W	PRD1______	-1.19	704398	592316	protein degradation	proteinase yscD
YDL151C	__________	-1.39	342277	246503	unknown	unknown
YDR272W	GLO2______	+1.33	617655	820061	methylglyoxal resistance	glyoxalase II
YEL056W	HAT2______	-1.04	417427	403145	chromatin structure	histone acetyltransferase complex subunit
YGR074W	SMD1______	+1.01	409197	411430	mRNA splicing	U6 snRNP protein
YHR088W	RPF1______	-1.45	674330	463652	unknown	unknown
YJR120W	__________	-1.35	139764	103411	unknown	unknown
YLR268W	SEC22_____	+1.13	884400	999594	secretion	ER-to-Golgi v-SNARE
YMR007W	__________	+1.63	247404	402746	unknown	unknown
YOR173W	__________	+1.06	113609	120238	unknown	unknown
YPL151C	PRP46_____	-1.10	399973	362336	mRNA splicing	unknown
YAL067C	SEO1______	+1.02	84153	85470	drug resistance	suppressor of sulfoxyde ethionine
YBR234C	ARC40_____	+1.12	113107	126142	cytoskeleton	Arp2/3 complex subunit
YDR103W	STE5______	+1.11	220821	244423	signaling, pheromone pathway	scaffold protein for MAP kinase cascade
YDR472W	TRS31_____	-1.15	536675	467170	secretion (putative)	transport protein particle (TRAPP) subunit, 31 kD
YER160C	__________	-1.09	137610	125776	unknown	unknown
YGL165C	__________	+1.51	263564	398836	unknown	unknown
YGR272C	__________	-1.26	412093	327112	unknown	unknown
YIL067C	__________	+1.01	261834	263512	unknown	unknown
YJL166W	QCR8______	+1.69	876722	1484920	oxidative phosphorylation	ubiquinol--cytochrome-c reductase subunit VIII
YKL162C	__________	+1.13	144625	163044	unknown	unknown
YLR096W	KIN2______	-1.04	738162	710593	unknown	protein kinase
YLR466W	YRF1-4____	-1.29	5501622	4251270	unknown	Y' helicase (subtelomerically-encoded)
YMR198W	CIK1______	-1.07	266760	249533	cytoskeleton	spindle pole body associated protein
YNL257C	SIP3______	+1.01	114944	116611	glucose derepression	(putative) transcriptional activator
YOL161C	__________	+1.09	307434	335376	unknown	unknown; similar to PAU1 family
YOR371C	__________	-1.26	226670	179385	unknown	unknown
YPR068C	HOS1______	-1.04	114457	110269	unknown	unknown; similar to Hda1p, Rpd3p, Hos2p, and Hos3p
YBR046C	ZTA1______	+1.31	170539	222770	unknown	putative quinone oxidoreductase
YCL069W	__________	+1.01	141431	142995	unknown	major facilitator superfamily
YDL163W	__________	-1.00	119698	119585	unknown	unknown
YDR284C	DPP1______	+1.20	426961	513161	phospholipid metabolism	diacylglycerol pyrophosphate phosphatase
YEL067C	__________	+1.01	189694	190945	unknown	unknown
YGR086C	__________	+1.22	4765261	5823443	unknown	unknown
YHR100C	__________	-1.01	331803	327196	unknown	unknown
YJR132W	NMD5______	-1.32	537698	406321	unknown	Nam7p/Upf1p-interacting protein
YLR280C	__________	-1.15	76754	66727	unknown	unknown
YMR019W	STB4______	+1.07	153639	164767	transcription	Sin3-binding protein
YNL065W	__________	+1.11	243131	269567	unknown	major facilitator superfamily
YOR185C	GSP2______	+1.11	1798343	1993023	nuclear organization	GTPase; ran homolog
YPL163C	SVS1______	+1.45	755413	1091969	vanadate resistance	unknown
YAR019C	CDC15_____	-1.04	352978	340696	cell cycle	protein kinase
YBR246W	__________	-1.09	332551	306314	unknown	unknown
YDR115W	__________	+1.05	277344	290619	unknown	unknown; similar to prokaryotic L34 ribosomal protein
YDR484W	SAC2______	+1.23	239356	294021	cytoskeleton	suppressor of actin mutation
YER171W	RAD3______	+1.02	301223	307058	transcription; DNA repair	TFIIH subunit
YGL177W	__________	+1.02	118165	120192	unknown	unknown
YGR284C	ERV29_____	+1.02	1154826	1183020	secretion (putative)	unknown; transport vesicle protein
YIL077C	__________	+1.27	279509	355084	unknown	unknown
YJL178C	__________	-1.25	1167949	932260	unknown	unknown
YKL174C	__________	-1.07	483411	453743	unknown	unknown; similar to Hnm1p and other permeases
YLR108C	__________	-1.08	228553	211689	unknown	unknown
YMR210W	__________	-1.56	972966	624020	unknown	unknown
YNL269W	__________	-1.12	282307	252450	unknown	unknown
YOR007C	SGT2______	-1.15	5147630	4474268	unknown	unknown
YOR383C	__________	+1.16	649067	755053	unknown	unknown
YPR080W	TEF1______	+1.05	16008005	16738064	protein synthesis	translation elongation factor EF-1 alph
YBR058C	UBP14_____	+1.10	445077	490065	protein degradation, ubiquitin-mediated	ubiquitin-specific protease
YCLX08C	__________	+1.07	143166	153633
YDL175C	__________	+1.16	236056	272924	unknown	unknown
YDR296W	MHR1______	+1.11	232317	258274	recombination, mitochondrial	unknown
YER001W	MNN1______	+1.07	392523	420812	protein glycosylation	alpha-1,3-mannosyltransferase
YGR098C	ESP1______	+1.01	83045	83977	cytoskeleton	spindle pole body duplication
YHR112C	__________	+1.20	422132	507811	unknown	unknown; similar to cystathionine gamma-synthase Str2p
YJR144W	MGM101____	+1.23	790934	975224	mitochondrial genome maintenance	(putative) nucleic acid interactor
YLR291C	GCD7______	-1.44	1219601	848526	protein synthesis	translation initiation factor eIF2b subunit

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YMR031C	__________	+1.08	515792	557175	unknown	unknown
YNL077W	__________	+1.18	300245	354260	unknown	unknown; similar to E. coli DnaJ and other DnaJ-like proteins
YOR195W	SLK19_____	-1.03	1403763	1365274	mitosis	unknown; synthetic lethal with kar3
YPL175W	SPT14_____	+1.15	418775	480841	protein processing	N-acetylglucosaminyltransferase (GPI anchor synthesis)
YAR042W	SWH1______	+1.04	120797	125171	unknown	unknown; similar to mammalian oxysterol-binding protein
YBR258C	__________	+1.21	207903	251536	unknown	unknown
YDR127W	ARO1______	-1.07	2261928	2105857	aromatic amino acid biosynthesis	pentafunctional enzyme
YDR496C	__________	-1.33	894051	672890	unknown	unknown
YER182W	__________	+1.05	339615	355548	unknown	unknown
YGL189C	RPS26A____	+1.04	16008005	16685973	protein synthesis	ribosomal protein S26A
YGR296W	YRF1-3____	+1.03	829231	857788	unknown	Y' helicase (subtelomerically-encoded)
YIL088C	__________	-1.00	708078	706252	unknown	unknown; similar to members of the major facilitator
YJL190C	RPS22A____	-1.01	15202402	15079198	protein synthesis	ribosomal protein S22A
YKL186C	MTR2______	+1.00	1413429	1414795	mRNA export	unknown
YLR120C	YPS1______	+1.16	261481	302606	protein processing	GPI-anchored aspartic protease
YMR222C	__________	+1.06	331786	351305	unknown	unknown; similar to S. pombe DFR1, dihydrofolate reductase
YNL281W	HCH1______	+1.14	1336101	1522028	stress response (putative)	unknown; overexpression suppresses hsp82 mutation
YOR019W	__________	+1.10	245932	270486	unknown	unknown
YPR092W	__________	-1.01	119756	118343	unknown	unknown
YBR070C	__________	+1.15	314054	359908	stress response	osmotolerance protein (putative)
YCR008W	SAT4______	-1.08	91862	84758	salt tolerance	protein kinase
YDL187C	__________	+1.24	109669	136317	unknown	unknown
YDR308C	SRB7______	+1.02	218647	221990	transcription	RNA polymerase II mediator subunit
YER011W	TIR1______	+1.23	1454746	1795636	stress response (putative)	cell wall protein
YHR124W	NDT80_____	+1.03	651932	673015	meiosis	transcription factor
YJR156C	THI11_____	+1.07	169004	181486	pyrimidine biosynthesis	thiamine regulated gene
YLR303W	MET17_____	+1.75	845580	1480687	methionine biosynthesis	O-acetylhomoserine sulfhydrylase
YMR042W	ARG80_____	+1.10	249049	273444	arginine metabolism	transcription factor
YNL089C	__________	+1.13	254630	288328	unknown	unknown
YOR207C	RET1______	-1.02	106974	105096	transcription	RNA polymerase III 130 kD subunit
YPL186C	__________	+1.36	129224	175935	unknown	unknown
YBL007C	SLA1______	+1.15	435623	499206	cytoskeleton	cortical actin assembly
YBR270C	__________	+1.19	152834	182075	unknown	unknown
YDL009C	__________	+1.50	270924	405816	unknown	unknown
YDR139C	RUB1______	+1.47	358761	527866	protein degradation	ubiquitin-like protein
YDR508C	GNP1______	+1.34	617245	828851	transport	glutamine permease
YFL007W	BLM3______	-1.43	647465	453951	drug resustance	unknown; major facilitator superfamily
YGL201C	MCM6______	-1.13	85114	75577	DNA replication	MCM initiator complex
YHL007C	STE20_____	+1.09	211877	230866	signaling, pheromone and pseudohyphal growth pathways	serine-threonine protein kinase
YJL202C	__________	+1.30	176984	230880	unknown	unknown
YKL198C	PTK1______	-1.11	169198	152589	polyamine transport	ser/thr protein kinase
YLR132C	__________	-1.04	120236	116147	unknown	unknown
YMR234W	RNH1______	+1.02	299607	304303	DNA replication (putative)	ribonuclease H
YNL291C	MID1______	+1.01	402169	405085	transport	Ca(2+) channel component
YOR031W	CRS5______	+1.03	206700	211947	Cu2+ ion homeostasis	metallothionein-like protein
YPL009C	__________	-1.26	120948	96336	unknown	unknown
YPR104C	FHL1______	-1.05	506718	482350	transcription	transcriptional activator
YBR082C	UBC4______	+1.24	1571161	1953339	protein degradation, ubiquitin-mediated	E2 ub.-conjugating enzyme
YCR020C	MAK31_____	+1.09	274438	298988	dsRNA virus propagation	unknown
YDL199C	__________	+1.23	127219	156015	unknown	unknown; similar to members of the sugar permease family
YDR318W	MCM21_____	+1.31	204781	268559	mitosis, chromosome segregation	unknown
YER021W	RPN3______	+1.33	1298433	1729384	protein degradation	26S proteasome regulatory subunit
YGL009C	LEU1______	-1.13	369133	326589	leucine biosynthesis	3-isopropylmalate dehydratase
YGR120C	SEC35_____	+1.11	285863	317958	secretion	peripheral membrane protein required for ER to Golgi vesicle docking
YHR135C	YCK1______	+1.33	674596	899934	unknown	protein kinase
YJL009W	__________	-1.01	1661042	1647526	unknown	unknown
YKL008C	LAC1______	+1.03	753518	774570	aging	unknown; similar to Lag1p, has 6 potential transmembrane
YLL009C	COX17_____	+1.12	402582	452761	respiration	cytochrome oxidase assembly
YLR314C	CDC3______	-1.01	746073	740965	cytokinesis	septin
YMR052W	FAR3______	+1.12	167784	187343	cell cycle, pheromone arrest	unknown
YNL101W	__________	+1.05	269010	283067	unknown	unknown; similar to members of a putative transporter family
YOL009C	MDM12_____	+1.03	227110	233786	mitochondrial inheritance	transmembrane protein
YOR219C	STE13_____	+1.16	344194	400337	mating	alpha-factor maturation
YPL198W	RPL7B_____	-1.37	9698098	7103632	protein synthesis	ribosomal protein L7B
YAR068W	__________	-1.11	150643	135609	unknown	unknown; similar to ICWP protein
YBL019W	APN2______	+1.19	98797	117712	DNA repair	exonuclease III homolog (AP endonuclease)
YBR282W	MRPL27____	+1.37	281341	386008	protein synthesis	ribosomal protein, mitochondrial L27
YDL021W	GPM2______	+1.98	167304	331577	glycolysis	phosphoglycerate mutase
YDR151C	CTH1______	+1.63	321676	525118	unknown	unknown
YDR520C	__________	+1.22	131000	160121	unknown	unknown; similar to glycosyl hydrolase
YFL016C	MDJ1______	+1.74	302276	525685	protein folding	chaperone; DnaJ homolog
YGL213C	SKI8______	-1.11	595134	535254	meiosis, recombination	antiviral RNA binding protein
YHL017W	__________	-1.17	529633	454318	unknown	unknown; similar to Ptm1p, member of major
YIL111W	COX5B_____	+1.45	467959	677156	oxidative phosphorylation	cytochrome-c oxidase subunit Vb
YJL214W	HXT8______	+1.13	128242	145309	transport	hexose permease
YKL210W	UBA1______	+1.04	511199	529485	protein degradation, ubiquitin-mediated	E1-like (ub.-activating) enzyme
YLR144C	ACF2______	+1.13	284581	322575	cytoskeleton	cortical actin assembly
YML018C	__________	-1.75	1608870	918036	unknown	unknown
YMR245W	__________	-1.05	474819	450888	unknown	unknown
YNL303W	__________	+1.05	690732	726279	unknown	unknown
YOR043W	WHI2______	+1.06	674178	713221	cell size	unknown
YPL021W	ECM23_____	-1.10	134970	122203	cell wall biogenesis (putative)	unknown
YPR116W	__________	-1.07	125251	117564	unknown	unknown
YBR092C	PHO3______	+1.11	160300	178651	thiamine uptake	acid phosphatase, constitutive
YCR029C	__________	+1.09	1151588	1257503
YDL211C	__________	+1.39	163592	227647	unknown	unknown
YDR330W	__________	+1.48	247770	366066	unknown	unknown; similar to Undulin extracellular matrix
YER033C	ZRG8______	+1.54	150040	231068	unknown	unknown; zinc regulated
YGL021W	ALK1______	+1.27	104667	132984	DNA repair (putative)	DNA damage-responsive protein
YGR132C	PHB1______	+1.07	1024003	1098881	antiproliferative protein	unknown
YHR145C	__________	+1.12	5281497	5915349	unknown	unknown
YJL021C	__________	+1.49	658825	980899	unknown	unknown
YKL020C	SPT23_____	+1.06	471798	502449	transcription	transcription factor
YLL021W	SPA2______	-1.04	610317	584228	cytoskeleton	cortical actin patch component
YLR326W	__________	+1.25	315003	394543	unknown	unknown
YMR063W	RIM9______	-1.11	143052	128807	sporulation	stimulates expression of IME1
YNL113W	RPC19_____	-1.20	1086148	906321	transcription	subunit common to RNA polymerases I and III
YOL021C	DIS3______	-1.06	106553	100398	RNA processing	3'-5' exoribonuclease complex subunit
YOR231W	MKK1______	-1.11	344205	309155	signaling, PKC1 pathway	MAP kinase (mitogen-activated protein kinase)
YPL210C	SRP72_____	+1.00	930927	933800	secretion	signal recognition particle subunit

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YBL031W	SHE1______	+1.40	113229	158027	unknown	overexpression is lethal
YBR294W	SUL1______	+1.61	132433	212681	transport	sulfate permease
YDL033C	__________	+1.29	136958	176592	unknown	unknown; similar to H. influenza protein HI0174
YDR163W	__________	+1.44	238026	342234	unknown	unknown
YDR532C	__________	+1.24	248613	308789	unknown	unknown
YFL026W	STE2______	+1.40	117089	164470	mating	alpha-factor receptor
YGL225W	GOG5______	+1.11	1899501	2099529	protein glycosylation	Golgi GDP-mannose transporter
YHL029C	__________	+1.15	296594	340586	unknown	unknown
YIL123W	SIM1______	+1.15	2239328	2578966	cell cycle	unknown
YJR002W	MPP10_____	-1.43	1233086	864801	rRNA processing	U3 snoRNP protein
YKL222C	__________	+1.04	231679	240108	unknown	unknown; similar to transcription factors, has Zn[2]-Cys[6]
YLR156W	__________	+1.07	100194	106801	unknown	unknown
YML030W	__________	+1.04	545563	568421	unknown	unknown
YMR258C	__________	+1.08	389080	421315	unknown	unknown
YNL315C	ATP11_____	+1.03	462594	476488	ATP synthesis	F1F0-ATPase complex assembly protein
YOR055W	__________	-1.07	118894	111274	unknown	unknown
YPL033C	__________	+1.02	119574	121723	unknown	unknown
YPR128C	__________	-1.05	368347	350755	unknown	unknown; similar to ADP/ATP carrier proteins
YBR104W	YMC2______	-1.28	507426	397565	transport	mitochondrial carrier family
YCR041W	__________	+1.25	497538	620234	unknown	unknown
YDL223C	__________	+1.19	131987	156859	unknown	unknown
YDR342C	HXT7______	+1.15	2567715	2950142	transport	hexose permease
YER044C	MEI4______	+1.30	123172	160046	meiosis, chromosome pairing and recombination	unknown
YGL033W	HOP2______	+1.35	99561	134837	meiosis, chromosome pairing (putative)	unknown
YGR144W	THI4______	+1.29	114019	146828	thiamine biosynthesis	unknown; biosynthetic enzyme
YHR157W	REC104____	-1.06	127588	119853	meiosis, recombination	ds break formation complex subunit
YJL033W	HCA4______	-1.53	774374	505542	rRNA processing	RNA helicase
YKL032C	IXR1______	+1.15	1168760	1344835	transcription, oxygen-dependent	HMG-transcription factor
YLL033W	__________	+1.14	208430	236940	unknown	unknown
YLR338W	__________	+1.07	129359	138479	unknown	unknown
YMR075W	__________	+1.12	190717	213803	unknown	unknown
YNL125C	ESBP6_____	-1.04	318556	306387	unknown	unknown; similar to mammalian monocarboxylate transporters
YOL033W	MSE1______	+1.04	291097	302355	protein synthesis	tRNA synthetase, mitochondrial, glutamyl
YOR243C	__________	-1.51	862902	571871	unknown	unknown
YPL222W	__________	+1.13	176180	199191	unknown	unknown
YBL043W	ECM13_____	+1.32	109955	144834	cell wall biogenesis	unknown
YDL045C	FAD1______	+1.32	302459	398676	flavin biosynthesis	flavin adenine dinucleotide (FAD) synthetase
YDR173C	ARG82_____	+1.28	312790	400726	arginine metabolism	transcription factor
YDR544C	__________	+1.35	344391	465896	unknown	unknown
YFL036W	RPO41_____	+1.19	308512	368013	transcription	mitochondrial RNA polymerase
YGL236C	MTO1______	-1.16	225644	195195	salt tolerance (putative)	unknown; similar to E. coli gidA protein
YHL040C	ARN1______	-1.02	267426	263388	unknown	unknown; similar to subtelomerically-encoded proteins
YIL135C	__________	-1.11	165695	149249	unknown	unknown
YJR013W	__________	-1.08	371159	344379	unknown	unknown; similar to human angiotensin II type 1b
YKR009C	FOX2______	+1.07	135535	144661	fatty acid metabolism	peroxisomal beta-oxidation protein
YLR166C	SEC10_____	+1.12	282106	317280	secretion	exocyst complex subunit
YMR270C	RRN9______	-1.01	458155	454587	transcription	component of upstream activation factor complex (UAF)
YNL327W	EGT2______	+1.04	125645	130261	cell cycle	unknown
YOR067C	ALG8______	+1.07	631326	676930	protein glycosylation	glycosyltransferase
YPL045W	VPS16_____	+1.07	97142	103632	vacuolar protein targeting	component of sorting nexin complex
YPR138C	MEP3______	+1.10	754701	828552	transport	ammonia permease
YBR115C	LYS2______	-1.12	492603	441322	lysine biosynthesis	L-aminoadipate-semialdehyde dehydrogenase
YCR053W	THR4______	-1.03	1781729	1729413	threonine biosynthesis	threonine synthase
YDL235C	YPD1______	+1.52	647609	985647	signaling	two-component phosphorelay intermediate
YDR354W	TRP4______	+1.11	494694	549943	tryptophan biosynthesis	anthranilate phosphoribosyltransferase
YER054C	GIP2______	+1.09	14363785	15701940	glucose repression	(putative) Glc7p regulatory subunit
YGL045W	__________	+1.06	230810	244991	unknown	unknown
YGR156W	__________	-1.17	313170	267804	unknown	unknown
YHR169W	DBP8______	-1.26	491761	391562	unknown	RNA helicase
YJL046W	__________	-1.11	331259	298721	unknown	unknown; similar to lipoate-protein ligase A
YKL043W	PHD1______	+1.26	485382	611225	pseudohyphal growth	transcription factor
YLL045C	RPL8B_____	-1.01	15923285	15836538	protein synthesis	ribosomal protein L8B
YLR350W	__________	+1.09	773729	839513	unknown	unknown
YMR086W	__________	+1.02	163103	166639	unknown	unknown
YNL137C	NAM9______	-1.07	339981	316747	protein synthesis	ribosomal protein, mitochondrial S4 (putative)
YOL045W	__________	-1.01	599850	591453	unknown	protein kinase
YOR255W	__________	-1.03	134286	130461	unknown	unknown
YPL234C	TFP3______	+1.01	2243657	2269196	vacuolar acidification	vacuolar H+-ATPase V0 domain 17 KD subunit
YBL055C	__________	+1.16	219715	255201	unknown	unknown
YDL057W	__________	+1.40	130695	182335	unknown	unknown
YDR184C	ATC1______	-1.03	374972	365706	cell polarity	member of Bud6p complex
YFL048C	EMP47_____	+1.29	810245	1047148	secretion	unknown; ER/Golgi membrane protein
YGL248W	PDE1______	+1.67	444308	742958	purine metabolism	3',5'-cyclic-nucleotide phosphodiesterase
YHR001W	__________	-1.05	634417	604398	unknown	unknown; similar to Ykr003p and members of the oxysterol-binding protein family
YIL147C	SLN1______	-1.13	2082596	1844178	signaling	two-component pathway
YJR025C	BNA1______	+1.25	410788	515009	nicotinic acid biosynthesis	3-hydroxyanthranilic acid dioxygenase
YKR021W	__________	+1.04	134595	139490	unknown	unknown
YLR178C	TFS1______	+1.73	350034	606983	cell cycle	suppresses cdc25 mutations
YML049C	RSE1______	-1.18	1191818	1014199	secretion and RNA splicing	unknown
YMR282C	AEP2______	+1.17	336362	393559	protein synthesis	translation of ATP9/OLI1 mRNA
YNL339C	YRF1-6____	+1.10	100762	111080	unknown	Y' helicase (subtelomerically-encoded)
YOR079C	ATX2______	+1.34	351320	471635	oxidative stress response	manganese-trafficking protein
YPL057C	SUR1______	+1.86	385156	715307	sphingolipid metabolism	suppresses cls2-2and rvs161
YPR150W	__________	+1.24	140276	173981	unknown	unknown
YBR127C	VMA2______	-1.30	1118466	859389	vacuolar acidification	58 kD regulatory subunit
YCR065W	HCM1______	+1.09	122124	133059	transcription (putative)	forkhead family of DNA-binding proteins
YDL247W	__________	+1.15	96398	111166	unknown	unknown; similar to maltose permeases including Yjr160p,
YER064C	__________	+1.13	333764	376047	unknown	unknown; similar to members of a putative transporter family
YGL057C	__________	+1.35	171172	231647	unknown	unknown
YGR164W	__________	-1.09	226638	208336	unknown	unknown; similar to Hansenula wingei mitochondrial
YHR181W	__________	+1.09	705617	766548	unknown	unknown
YJL058C	__________	-1.07	175411	164492	unknown	unknown
YKL055C	OAR1______	-1.09	97120	89200	respiration	3-oxo-acyl-(acyl carrier protein) reductase
YLL057C	__________	+1.04	567770	590505	unknown	unknown; similar to C-terminal half E. coli dioxygenase
YLR362W	STE11_____	+1.07	188607	201090	signaling, pheromone and pseudohyphal growth pathways	MAPKKK (mitogen-activated protein kinase kinase kinase)
YMR097C	__________	+1.15	369181	423197	unknown	unknown
YNL149C	__________	-1.17	1440927	1227926	unknown	unknown
YOL055C	THI20_____	+1.04	312131	323334	thiamine metabolism (putative)	unknown; similar to bacterial transcription factors
YOR267C	__________	+1.33	973601	1292956	unknown	protein kinase
YPL246C	__________	-1.02	608697	599682	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YBL067C	UBP13_____	-1.00	138918	138494	protein degradation, ubiquitin-mediated	ubiquitin carboxyl-terminal hydrolase
YDL069C	CBS1______	+1.27	175372	223135	protein synthesis	translation activator of COB mRNA (mitochondria)
YDR196C	__________	+1.31	379692	497736	unknown	unknown
YFL060C	SNO3______	+1.23	163479	201423	unknown	unknown; induced in stationary phase
YGL260W	__________	-1.02	112744	110761	unknown	unknown; similar to Yir040p
YHR011W	DIA4______	+1.12	186902	209680	pseudohyphal growth (putative)	unknown
YIL158W	__________	+1.04	572268	592668	unknown	unknown; similar to Ykr100p
YJR036C	HUL4______	+1.06	125104	132997	protein degradation (putative)	ubiquitin-protein ligase (E3)
YKR033C	__________	-1.03	81900	79462	unknown	unknown; similar to Gat1p
YLR190W	__________	-1.06	434860	409276	unknown	unknown
YML060W	OGG1______	-1.10	408064	372564	DNA repair	8-oxoguanine DNA glycosylase
YMR293C	__________	+1.01	236532	238409	unknown	unknown; similar to amidase
YNR012W	URK1______	-1.32	469294	355617	pyrimidine metabolism	uridine kinase
YOR091W	__________	-1.48	1204031	811384	unknown	unknown
YPL067C	__________	+1.36	176068	239435	unknown	unknown
YBR139W	__________	-1.01	2576567	2539440	unknown	unknown; similar to serine-type carboxypeptidases
YCR076C	__________	+1.09	286383	310886	unknown	unknown
YDR011W	SNQ2______	-1.11	1426561	1287246	4-nitroquinoline-N-oxide resistance	putative ATP-dependent permease
YDR376W	ARH1______	+1.05	433666	455636	unknown	unknown; similar to human adrenodoxin reductase
YER073W	ALD5______	-1.19	1341868	1128176	fermentation	mitochondrial aldehyde dehydrogenase
YGL069C	__________	+1.04	643514	667889	unknown	unknown
YGR176W	__________	-1.22	278693	228187	unknown	unknown
YHR193C	EGD2______	-1.05	8679894	8233947	protein synthesis (putative)	homolog of human nascent-polypeptide-associated complex subunit
YJL070C	__________	-1.04	116028	111669	unknown	unknown; similar to rat AMP deaminase 1
YKL067W	YNK1______	+1.35	1380833	1861399	nucleotide metabolism	nucleoside diphosphate kinase
YLR002C	__________	-1.42	977006	688654	unknown	unknown
YLR374C	__________	-1.18	179497	151866	unknown	unknown
YMR109W	MYO5______	-1.00	166475	165742	cytoskeleton	myosin, class I
YNL161W	CBK1______	+1.12	326487	365582	cell wall biosynthesis (putative)	protein kinase
YOL067C	RTG1______	-1.08	175037	161389	organelle communication	h-l-h transcription factor
YOR279C	__________	+1.21	276498	335786	unknown	unknown
YPL257W	__________	+1.10	182026	200586	unknown	unknown
YBL079W	NUP170____	+1.06	557338	589439	nuclear protein targeting	nuclear pore protein
YDL081C	RPP1A_____	+1.08	15001179	16254983	protein synthesis	ribosomal protein P1A, acidic
YDR208W	MSS4______	-1.04	393976	379435	actin organization	Phosphatidylinositol 4-Phosphate Kinase
YFR004W	RPN11_____	+1.06	927564	984086	transcription	putative global regulator
YGR009C	SEC9______	+1.17	542062	634126	secretion	plasma membrane t-SNARE
YHR022C	__________	-1.04	170804	163649	unknown	unknown; similar to N-terminal region of ras-related
YIL170W	HXT12_____	-1.22	186089	152355	transport	hexose permease
YJR048W	CYC1______	+1.06	556119	592166	oxidative phosphorylation	cytochrome-c isoform 1
YKR045C	__________	-1.01	430458	426502	unknown	unknown
YLR202C	__________	+1.18	235351	277495	unknown	unknown
YML072C	__________	-1.00	3311148	3304599	unknown	unknown
YMR304W	UBP15_____	+1.05	266746	280040	protein degradation, ubiquitin-mediated	putative deubiquitinating enzyme
YNR024W	__________	-1.28	421718	330752	unknown	unknown
YOR103C	OST2______	+1.16	893665	1036309	protein glycosylation	oligosaccharyltransferase complex subunit
YPL079W	RPL21B____	+1.05	15941028	16722559	protein synthesis	ribosomal protein L21B
YPR170C	__________	+1.11	1130297	1258726	unknown	unknown
YBR151W	APD1______	-1.04	122460	117851	cytoskeleton (putative)	unknown
YCR088W	ABP1______	+1.29	1224499	1579112	cytoskeleton	actin binding protein
YDR023W	SES1______	-1.01	2512503	2489297	protein synthesis	tRNA synthetase, seryl
YDR388W	RVS167____	+1.08	1134009	1224695	cytoskeleton	actin-binding protein
YER085C	__________	+1.02	114403	117056	unknown	unknown
YGL081W	__________	-1.01	127787	126466	unknown	unknown
YGR188C	BUB1______	+1.08	316053	341186	cell cycle, checkpoint	protein kinase
YHR205W	SCH9______	-1.01	323132	320226	signaling	protein kinase
YJL082W	IML2______	+1.24	122760	152287	plasmid maintenance (putative)	unknown
YKL079W	SMY1______	+1.06	199409	212249	cytoskeleton	kinesin-related protein
YLR014C	PPR1______	-1.07	168122	157343	pyrimidine biosynthesis	transcription factor
YLR386W	__________	+1.00	228619	229577	unknown	unknown
YNL173C	MDG1______	-1.02	195099	190604	signaling, pheromone pathway	unknown
YOL079W	__________	-1.32	172919	131212	unknown	unknown; similar to NADH dehydrogenase chain 4-honeybee
YOR291W	__________	-1.06	611574	574536	unknown	unknown; similar to cation translocating ATPases
YPL267W	__________	+1.07	262889	281166	unknown	unknown
YBL091C	MAP2______	+1.06	947727	1001601	protein processing	methionine aminopeptidase 2
YDL093W	PMT5______	-1.13	429163	381414	protein glycosylation	dolichyl phosphate-D-mannose:protein O-D-mannosyltransferase
YDR216W	ADR1______	+1.21	325337	393636	transcription	ADH2 and peroxisomal protein transcription factor
YFR016C	__________	-1.09	81001	74548	unknown	unknown; similar to Uso1p and to rat neurofilament
YGR021W	__________	-1.01	299242	295949	unknown	unknown
YHR034C	__________	-1.01	345364	340653	unknown	unknown
YIR004W	DJP1______	-1.17	523445	447085	peroxisome biogenesis	unknown
YJR060W	CBF1______	-1.73	259441	150038	mitosis	kinetochore protein
YKR057W	RPS21A____	-1.07	14914637	13911906	protein synthesis	ribosomal protein S21A
YLR214W	FRE1______	-1.38	1079803	780909	iron homeostasis	ferric (and cupric) reductase
YML084W	__________	+1.10	113429	124956	unknown	unknown
YMR314W	PRE5______	+1.09	1429693	1561002	protein degradation	20S proteasome subunit(alpha6)
YNR036C	__________	+1.19	944139	1118817	unknown	unknown; similar to ribosomal protein S12
YOR115C	TRS33_____	+1.28	593774	762037	secretion (putative)	transport protein particle (TRAPP) subunit, 33 kD
YPL091W	GLR1______	+1.04	1646144	1713306	glutathione metabolism	glutathione reductase
YPR182W	SMX3______	+1.03	104473	107123	mRNA splicing	core snRNP protein
YBR162W	YSY6______	+1.34	1643790	2207320	secretion (putative)	unknown
YCR099C	__________	+1.25	203830	254812	unknown	unknown; similar to Pep1p, probably represents a fragmented coding region of a pseudogene
YDR400W	URH1______	-1.21	322487	267215	pyrimidine metabolism	uridine nucleosidase
YER095W	RAD51_____	+1.40	356799	500474	DNA repair and recombination	recombinase
YGL093W	SPC105____	+1.16	359340	417044	cytoskeleton	spindle pole body component
YGR200C	ELP2______	-1.31	520481	396713	transcription	RNA polymerase II subunit (elongator)
YJL094C	__________	+1.19	138868	164760	unknown	unknown; similar to Enterococcus hirae Na+/H+-antiporter
YKL091C	__________	+1.39	216868	301431	unknown	unknown; similar to Sec14p
YLR026C	SED5______	+1.12	360814	403366	secretion	ER-to-Golgi t-SNARE
YLR398C	SKI2______	-1.12	148239	132610	mRNA decay and virus resistance	putative helicase
YMR132C	__________	+1.13	171394	193058	unknown	unknown
YNL185C	MRPL19____	+1.23	286617	353942	protein synthesis	ribosomal protein, mitochondrial L19
YOL091W	SPO21_____	+1.14	137071	156031	sporulation	unknown
YOR302W	__________	+1.04	97592	101164	unknown	unknown
YPL279C	__________	+1.01	89621	90530	unknown	unknown
YAL011W	__________	+1.15	178600	205108	unknown	unknown
YBR175W	__________	+1.18	245989	290508	unknown	unknown
YCRX05W	__________	+1.21	194147	235360
YDR046C	BAP3______	+1.36	366231	498916	transport	branched-chain amino acid permease
YDR413C	__________	-1.04	468223	451103	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YER108C	FLO8______	+1.21	215465	261019
YGL106W	MLC1______	+1.04	896741	936213	cytoskeleton	myosin light chain
YGR213C	RTA1______	+1.13	141214	159608	7-aminocholesterol resistance	unknown
YIL010W	DOT5______	+1.51	401520	604405	transcription	derepressor of telomeric silencing
YJL107C	__________	-1.03	128554	124790	unknown	unknown
YKL103C	LAP4______	-1.11	333454	299905	protein degradation	vacuolar aminopeptidase ysc1
YLR037C	__________	+1.40	220380	307766	unknown	unknown; similar to Pau3p and other members of the PAU1
YMR144W	__________	+1.21	292027	354080	unknown	unknown
YNL198C	__________	-1.24	97159	78117	unknown	unknown
YOR314W	__________	-1.10	110519	100429	unknown	unknown
YPR009W	__________	-1.13	414534	365856	unknown	unknown
YBL102W	SFT2______	+1.13	510959	575708	unknown	suppresses sed5 ts mutants
YCL009C	ILV6______	+1.02	599621	612731	isoleucine and valine biosynthesis	acetolactate synthase
YDL106C	GRF10_____	+1.28	199012	255217	phosphate signaling	transcription factor
YDR229W	__________	+1.17	118501	138380	unknown	unknown
YEL010W	__________	+1.09	104708	114572	unknown	unknown
YFR029W	PTR3______	+1.18	184876	218258	transport	peptide permease regulator
YGR032W	GSC2______	+1.93	239329	463018	cell wall biogenesis	1,3-beta-D-glucan synthase subunit
YHR046C	__________	-1.08	457698	424408	unknown	unknown; similar to inositol monophosphatase of E. coli,
YIR017C	MET28_____	+1.32	156757	206680	sulfur amino acid metbolism	transcriptional activator
YJR073C	OPI3______	+1.04	428800	444790	phospholipid metabolism	methylene-fatty-acyl-phospholipid synthase
YKR070W	__________	+1.04	566745	591842	unknown	unknown
YLR227C	__________	+1.33	281726	374053	unknown	unknown
YML096W	__________	-1.09	396309	361989	unknown	unknown
YNL010W	__________	-1.05	3169220	3023376	unknown	unknown
YNR049C	MSO1______	+1.23	379890	466651	secretion	unknown; interacts with Sec1p
YOR128C	ADE2______	-1.29	980041	760107	purine biosynthesis	phosphoribosylaminoimidazole carboxylase
YPL104W	MSD1______	+1.00	231371	232128	protein synthesis	tRNA synthetase, mitochondrial, aspartyl
YPR195C	__________	-1.23	92556	75513	unknown	unknown
YAL023C	PMT2______	+1.08	850690	920712	protein glycosylation	dolichyl phosphate-D-mannose:protein O-D-mannosyltransferase
YBR187W	__________	-1.02	589483	576403	unknown	unknown; similar to ND5 and PSB2 (SP:P03920 and SP:P20898)
YCRX17W	__________	+1.60	913599	1464939
YDR058C	TGL2______	+1.30	144450	188211	fatty acid metabolism	triacylglycerol lipase
YDR425W	__________	+1.41	188260	264957	unknown	unknown
YGL118C	__________	+1.06	81126	86329	unknown	unknown; similar to Autographa californica late expression
YGR225W	AMA1______	+1.06	78161	83021	sporulation	activator of meiotic anaphase promoting complex
YIL021W	RPB3______	+1.02	839925	856180	transcription	RNA polymerase II 45 kDa subuni
YJL119C	__________	+1.15	151687	174439	unknown	unknown
YKL115C	__________	+1.15	103860	119446	unknown	unknown
YLR049C	__________	+1.33	414850	551209	unknown	unknown
YLR421C	RPN13_____	+1.13	1077112	1222226	protein degradation (putative)	26S proteasome subunit (putative)
YMR155W	__________	+1.24	225845	279972	unknown	unknown; similar to E. coli ribosomal protein S8
YNL210W	MER1______	-1.06	183571	172734	meiosis, MER2 mRNA splicing	RNA binding protein
YOL114C	__________	-1.07	137133	127788	unknown	unknown; similar to human DS-1 protein
YOR326W	MYO2______	-1.03	100918	98163	cytoskeleton	myosin, class V
YPR021C	__________	-1.09	332588	304689	unknown	unknown; similar to proteins of the mitochondrial carrier family
YBR001C	NTH2______	+1.54	201706	310181	trehalose metabolism	alpha,alpha-trehalase
YCL022C	__________	+1.41	210522	296931	unknown	unknown
YDL118W	__________	+1.35	169150	227834	unknown	unknown
YEL021W	URA3______	+1.34	12328041	16579285	pyrimidine biosynthesis	orotidine-5'-phosphate decarboxylase
YFR038W	__________	+1.06	403002	425994	unknown	unknown
YGR039W	__________	+1.11	142619	157793	unknown	unknown; similar to Sauroleishmania tar protein 1
YIR026C	YVH1______	-1.46	575467	393936	sporulation	protein phosphatase
YJR086W	STE18_____	+1.39	557851	773743	signaling, pheromone pathway	gamma subunit of G protein
YKR082W	NUP133____	-1.12	740134	660253	nuclear protein targeting	nuclear pore protein
YLR237W	THI7______	-1.16	378274	327312	transport	thiamine transporter
YML106W	URA5______	-1.02	3439096	3369444	pyrimidine biosynthesis	orotate phosphoribosyltransferase
YNL022C	__________	-1.32	504363	381836	unknown	unknown
YNR061C	__________	-1.08	860737	800606	unknown	unknown
YOR140W	SFL1______	-1.07	202701	189096	cell surface assembly	transcription factor
YPL116W	HOS3______	+1.10	339539	372434	unknown	unknown; similar to Hda1p, Rpd3p, Hos2p, and Hos1p
YAL034W	MTW1______	+1.16	224669	260091	unknown	unknown
YBR199W	KTR4______	+1.17	146287	171840	protein glycosylation	putative alpha-1,2-mannosyltransferase
YDR070C	__________	+1.15	125355	144502	unknown	unknown
YDR437W	__________	+1.48	132821	196474	unknown	unknown
YER131W	RPS26B____	+1.05	14934284	15754024	protein synthesis	ribosomal protein S26B
YGL130W	CEG1______	+1.10	284724	314221	mRNA capping	mRNA guanylyltransferase
YGR237C	__________	+1.32	237204	314022	unknown	unknown
YIL033C	SRA1______	+1.14	590861	672195	signaling?	cAMP dependent protein kinase, regulatory subunit
YJL131C	__________	+1.20	219497	263698	unknown	unknown; similar to carbamylphosphate synthetase
YKL127W	PGM1______	-1.19	851376	712528	glycolysis	phosphoglucomutase
YLR061W	RPL22A____	-1.12	10642583	9465436	protein synthesis	ribosomal protein L22A
YLR431C	__________	+1.07	330218	353145	unknown	unknown
YNL222W	SSU72_____	-1.22	129728	106270	transcription	nuclear protein
YOL126C	MDH2______	-1.04	723967	696493	TCA cycle	malate dehydrogenase
YOR338W	__________	+1.11	157847	174519	unknown	unknown
YPR033C	HTS1______	-1.40	2890927	2064404	protein synthesis	tRNA synthetase, histidyl
YBR012W	TY1A______	-1.49	5421815	3643087	unknown	unknown
YCL034W	__________	+1.07	537547	574208	unknown	unknown
YDL130W	RPP1B_____	+1.15	10702663	12295715	protein synthesis	ribosomal protein L44', acidic
YDR253C	MET32_____	+1.12	283072	317442	methionine metabolism	transcription factor
YEL033W	__________	+1.24	3708640	4596408	unknown	unknown
YFR050C	PRE4______	+1.15	1271757	1459910	protein degradation	proteasome subunit, B type
YGR051C	__________	+1.10	318154	348881	unknown	unknown
YHR067W	__________	+1.07	213212	227365	unknown	unknown
YIR038C	GTT1______	+1.22	547574	667920	glutathione metabolism	glutathione transferase
YJR097W	__________	-1.07	226789	212537	unknown	unknown; similar to E. coli DnaJ
YKR094C	RPL40B____	+1.04	15994346	16575436	protein synthesis	ribosomal protein L40B
YLR249W	YEF3______	+1.01	258927	260489	protein synthesis	translation elongation factor eEF3
YML117W	__________	+1.23	233464	287466	unknown	unknown
YNL034W	__________	+1.07	123962	132099	unknown	unknown; similar to Ynl018p
YNR073C	__________	-1.01	194507	192257	unknown	unknown; similar to E. coli D-mannonate oxidoreductase
YOR150W	MRPL23____	+1.21	451160	547976	protein synthesis	ribosomal protein, mitochondrial large subunit
YPL128C	TBF1______	-1.07	396797	371778	telomere length regulation	telomere TTAGGG repeat-binding factor
YAL043C	PTA1______	+1.20	130343	156015	tRNA processing	unknown
YBR211C	AME1______	+1.25	216898	270319	unknown	microtubule associated
YDR082W	STN1______	+1.14	242578	276825	telomere length regulation	asssociates with Cdc13p
YDR449C	__________	-1.04	481779	463155	unknown	unknown
YER141W	COX15_____	+1.37	214823	293479	respiration	cytochrome oxidase assembly factor
YGL142C	GPI10_____	-1.08	185128	172122	phospholipid metabolism	glycosyl phosphatidyl inositol (GPI) synthesis

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YGR249W	MGA1______	+1.03	88466	91069	pseudohyphal growth (putative)	unknown
YIL045W	PIG2______	+1.17	195990	228378	glucose repression	(putative) Glc7p regulatory subunit
YJL143W	TIM17_____	+1.04	1053983	1092254	mitochondrial protein targeting	inner membrane translocase component
YKL139W	CTK1______	+1.11	227979	252903	transcription	protein kinase; phosphorylates RNA pol. II subunit
YLR073C	__________	-1.14	539993	475481	unknown	unknown
YLR443W	ECM7______	+1.19	300599	358123	cell wall biogenesis	unknown
YMR176W	ECM5______	+1.14	499539	567609	cell wall biogenesis	unknown
YNL234W	__________	+1.01	210228	212549	unknown	unknown; similar to mammalian globins
YOL138C	__________	-1.08	374212	345554	unknown	unknown
YOR348C	PUT4______	+1.09	146391	158989	transport	proline and gamma-aminobutyrate permease
YPR045C	__________	+1.03	190586	197016	unknown	unknown; similar to C. elegans protein
YBR023C	CHS3______	+1.42	151781	215547	cell wall biogenesis	chitin synthase III
YCL046W	__________	-1.02	106436	104088	unknown	unknown
YDL140C	RPO21_____	+1.08	873602	944056	transcription	RNA polymerase II 215 kD subunit
YEL045C	__________	+1.06	116665	123174	unknown	unknown
YGR063C	SPT4______	+1.02	700118	714417	transcription	elongation factor
YHR078W	__________	-1.20	262399	219291	unknown	unknown
YJR109C	CPA2______	+1.02	109430	111144	glutamate metabolism	carbamyl phosphate synthetase
YKR106W	__________	-1.05	128336	122558	unknown	major facilitator superfamily
YLR258W	GSY2______	+2.18	348769	758624	glycogen metabolism	glycogen synthase
YML129C	COX14_____	+1.14	374960	426317	respiration	cytochrome-c oxidase assembly protein
YNL044W	YIP3______	+1.19	1311954	1561413	unknown	unknown; interacts with Ypt protein(s)
YOR162C	YRR1______	-1.01	359538	355604	transport	transcriptional activator of SNQ2
YPL140C	MKK2______	+1.00	281968	282298	signaling, PKC1 pathway	MAP kinase (mitogen-activated protein kinase)
YAL056W	__________	+1.09	88873	96940	unknown	unknown
YBR223C	__________	+1.11	106927	118926	unknown	unknown
YDR094W	__________	+1.30	503091	652434	unknown	unknown
YDR461W	MFA1______	+1.20	97623	116803	mating	a-factor precursor
YER151C	UBP3______	+1.04	213812	221714	protein degradation, ubiquitin-mediated	ubiquitin-specific protease
YGL154C	LYS5______	+1.12	314650	353932	lysine biosynthesis	aminoadipate-semialdehyde dehydrogenase subunit
YGR261C	APL6______	+1.08	258710	278218	vacuolar protein targeting	AP-3 complex subunit
YIL057C	__________	-1.09	2357185	2167224	unknown	unknown
YJL155C	FBP26_____	+2.06	188526	387541	fructose metabolism	fructose-2,6-bisphosphatase
YKL151C	__________	+1.22	400180	488246	unknown	unknown
YLR085C	ARP6______	-1.06	261565	247130	cytoskeleton (putative)	actin-related protein
YLR455W	__________	-1.21	279298	231356	unknown	unknown
YMR188C	__________	+1.15	389540	449329	unknown	unknown; similar to 30S ribosomal proteins (S17)
YNL246W	__________	+1.07	591280	629882	unknown	unknown; similar to Drosophila melanogaster SET protein
YOL150C	__________	+1.54	509066	785840	unknown	unknown
YOR360C	PDE2______	+1.17	613665	720934	signaling (putative)	high affinity 3',5'-cAMP phosphodiesterase
YPR057W	BRR1______	+1.11	328721	365929	mRNA splicing	required for snRNP biogenesis
YBR035C	PDX3______	+1.32	717047	948155	sterol uptake (putative)	pyridoxine (pyridoxamine) phosphate oxidase
YCL058C	__________	+1.25	555892	693698	unknown	unknown
YDL152W	__________	-1.22	139682	114046	unknown	unknown
YDR273W	__________	+1.23	145865	179027	unknown	unknown
YEL057C	__________	+1.36	140084	190436	unknown	unknown
YGR075C	PRP38_____	+1.07	453938	484173	mRNA splicing	U4/U6 snRNA dissociation factor
YHR089C	GAR1______	-1.51	2732373	1806840	rRNA processing	snoRNP protein
YJR121W	ATP2______	+1.22	1570160	1920395	ATP synthesis	F1F0-ATPase complex, F1 beta subunit
YLR269C	__________	+1.33	291954	388126	unknown	unknown
YMR008C	PLB1______	+1.21	660909	800879	phospholipid metabolism	phospholipase B
YOR174W	MED4______	+1.04	105774	110005	transcription	RNA polymerase II mediator subunit
YPL152W	RRD2______	+1.17	324751	379267	drug resistance	unknown
YBR235W	__________	+1.07	140472	150267	unknown	unknown; similar to human SLC12A1 gene for which mutations
YDR104C	SPO71_____	+1.05	128433	135452	sporulation	unknown
YDR473C	PRP3______	+1.17	232353	271536	mRNA splicing	U4/U6 snRNP protein
YER161C	SPT2______	+1.20	442879	532336	chromatin structure	HMG-like non-histone protein
YGL166W	CUP2______	+1.33	299035	399196	transcription	copper-dependent transcriptional activator
YGR273C	__________	+1.14	110363	125537	unknown	unknown
YIL068C	SEC6______	-1.08	719929	666451	secretion	exocyst complex subunit
YJL167W	ERG20_____	+1.26	3203445	4050341	sterol metabolism	farnesyl-pyrophosphate synthetase
YKL163W	PIR3______	+1.88	3486160	6548369	unknown	unknown; similar to members of the Pir1p/Hsp150p/Pir3p
YLR097C	__________	+1.29	413856	533302	unknown	unknown
YLR467W	YRF1-5____	-1.26	4681420	3707660	unknown	Y' helicase (subtelomerically-encoded)
YMR199W	CLN1______	+1.17	403884	472489	cell cycle	G1/S cyclin
YNL258C	__________	+1.03	119321	122666	unknown	unknown
YOL162W	__________	+1.03	170734	176171	unknown	unknown
YOR372C	NDD1______	+1.16	641666	746252	mitosis (putative)	unknown
YPR069C	SPE3______	+1.04	121482	126272	polyamine biosynthesis	putrescine aminopropyltransferase (spermidine synthase)
YBR047W	__________	+1.02	100562	102196	unknown	unknown
YCL073C	__________	+1.06	118913	126065	unknown	major facilitator superfamily
YDL164C	CDC9______	+1.11	364783	404300	DNA replication and repair	DNA ligase
YDR285W	ZIP1______	+1.00	137261	137446	meiosis	synaptonemal complex protein
YEL068C	__________	+1.04	259893	269211	unknown	unknown
YGR087C	PDC6______	-1.98	2669593	1349750	glycolysis	pyruvate decarboxylase 3
YHR101C	BIG1______	+1.05	177908	186984	signaling (putative)	suppresses rot1/rot2 synthetic lethality
YJR133W	XPT1______	+1.19	532460	635417	xanthine utilization	xanthine phosphoribosyltransferase
YLR281C	__________	+1.09	101453	110988	unknown	unknown
YMR020W	FMS1______	+1.17	249978	292259	sterol metabolism (putative)	unknown
YNL066W	SUN4______	-1.36	2308414	1700669	aging	unknown
YOR186W	__________	-1.02	132737	130616	unknown	unknown
YPL164C	MLH3______	+1.08	271523	292559	DNA repair; DNA recombination	MutL homolog
YAR020C	PAU7______	+1.19	145472	173393	unknown	unknown; similar to Pau3p/Ycr104p, PAU1 family
YBR247C	ENP1______	-1.29	719831	556179	protein glycosylation	putative oligosaccharyltransferase complex subunit
YDR116C	__________	+1.11	252307	279301	unknown	unknown; similar to prokaryotic ribosomal protein L1
YDR485C	__________	+1.19	162563	192767	unknown	unknown; similar to human YL-1 protein, GB:D43642
YER172C	BRR2______	-1.15	464376	403357	mRNA splicing	RNA helicase
YGL178W	MPT5______	-1.23	103687	84172	unknown	unknown
YGR285C	ZUO1______	-1.34	8270912	6183358	unknown	binds Z-DNA
YIL078W	THS1______	-1.57	3792113	2410354	protein synthesis	tRNA synthetase, threonyl
YJL179W	PFD1______	-1.15	502255	435506	protein folding	prefoldin subunit 1
YKL175W	__________	-1.37	972495	711974	unknown	unknown
YLR109W	AHP1______	-1.01	15885801	15797629	oxidative stress response	alkyl hydroperoxide reductase
YMR211W	__________	+1.00	464129	466093	unknown	unknown; similar to beta-tubulins
YNL270C	ALP1______	-1.12	230382	206525	transport	basic amino acid permease
YOR008C	SLG1______	-1.00	273661	273595	signaling, stress response and cell wall integrity	unknown
YOR384W	FRE5______	+1.02	199776	202951	unknown	unknown; similar to Fre2p
YPR081C	__________	+1.07	284610	305931	unknown	unknown; similar to glycyl-tRNA synthetases
YBR059C	AKL1______	+1.09	348186	379985	unknown	protein kinase
YCLX09W	__________	+1.05	127699	134043

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YDL176W	__________	+1.13	232614	261732	unknown	unknown
YDR297W	SUR2______	+1.10	928902	1024896	sphingolipid metabolism	hydroxylase
YER002W	__________	+1.02	101671	103538	unknown	unknown
YGR099W	TEL2______	+1.02	241674	247670	telomere length regulation	telomere binding protein
YHR113W	__________	-1.03	735995	715868	unknown	unknown; similar to vacuolar aminopeptidase Lap4p/Ape1p
YJR145C	RPS4A_____	+1.05	15901973	16677815	protein synthesis	ribosomal protein S4A
YLR292C	SEC72_____	+1.01	1255055	1266281	secretion	ER protein translocation subcomplex subunit
YNL078W	__________	-1.01	586052	581186	unknown	unknown
YOR196C	LIP5______	+1.05	632660	662370	fatty acid metabolism	lipoic acid synthase
YPL176C	__________	+1.02	231181	235743	unknown	unknown; similar to Ssp134p
YAR043C	__________	+1.05	94827	99859
YBR259W	__________	+1.20	127636	152927	unknown	unknown; similar to serine-type carboxypeptidase Prc1p
YDR128W	__________	+1.05	204647	214394	unknown	unknown
YDR497C	ITR1______	+1.03	1497898	1539245	transport	inositol permease
YER183C	__________	-1.01	122849	122049	unknown	unknown
YGL190C	CDC55_____	+1.15	286801	330017	cell cycle	protein phosphatase
YIL089W	__________	-1.00	152831	152794	unknown	unknown
YJL191W	RPS14B____	-1.21	6524966	5372697	protein synthesis	ribosomal protein S14B
YKL187C	__________	-1.06	204780	193441	unknown	unknown; similar to 4-mycarosyl isovaleryl-CoA transferase
YLR121C	YPS3______	+2.39	380787	909095	protein processing	GPI-anchored aspartic protease
YMR223W	UBP8______	-1.09	287952	263894	protein degradation, ubiquitin-mediated	putative deubiquitinating enzyme
YNL282W	POP3______	-1.22	228573	187322	rRNA and tRNA processing	RNase P and RNase MRP subunit
YOR020C	HSP10_____	+1.13	1881737	2133286	protein folding	mitochondrial chaperonin
YPR093C	__________	+1.04	265559	277234	unknown	unknown
YBR071W	__________	+2.09	361142	756191	unknown	unknown; similar to Herpesvirus saimiri EERF2
YCR009C	RVS161____	-1.11	83218	75256	cytoskeleton	actin-binding protein
YDL188C	PPH22_____	+1.25	1401100	1746014	cell cycle	protein phosphatase 2A
YDR309C	GIC2______	+1.46	326853	477903	bud emergence	binds Cdc42p
YER012W	PRE1______	+1.04	1459718	1513016	protein degradation	20S proteasome subunit C11(beta4)
YHR125W	__________	-1.21	66749	55038	unknown	unknown
YJR157W	__________	-1.19	79837	67187	unknown	unknown
YLR304C	ACO1______	-1.03	2545814	2479820	TCA cycle	aconitase
YMR043W	MCM1______	+1.44	2134774	3073313	transcription	multifunctional regulator
YNL090W	RHO2______	+1.24	604893	750755	signaling	GTP-binding protein, rho family
YOR208W	PTP2______	+1.66	186383	308538	signaling, high osmolarity pathway	protein tyrosine phosphatase
YPL187W	MF(ALPHA)1	+1.18	9671764	11364833	mating	alpha factor precursor
YBL008W	HIR1______	-1.07	89328	83772	transcription	histone transcription inhibitor
YBR271W	__________	-1.18	301764	254954	unknown	unknown; similar to Clostridium botulinum C1 toxin
YDL010W	__________	+1.46	289270	421288	unknown	unknown; similar to Ybr014p and glutaredoxins
YDR140W	__________	+1.28	412613	526831	unknown	unknown
YDR509W	__________	-1.02	133801	130764	unknown	unknown
YFL008W	SMC1______	-1.03	1108597	1080969	mitosis, chromosome condensation and segregation	unknown
YGL202W	ARO8______	-1.01	1515405	1503168	aromatic amino acid biosynthesis	aromatic amino acid aminotransferase
YHL008C	__________	-1.02	221446	216057	unknown	unknown; similar to E. coli NirC potential formate
YIL100W	__________	+1.10	112200	123897	unknown	unknown
YJL203W	PRP21_____	+1.09	232232	253807	mRNA splicing	U2 snRNP activation
YKL199C	YKT9______	+1.05	320477	337400	unknown	unknown
YLR133W	CKI1______	+1.05	207389	218266	lipid metabolism	choline kinase
YMR235C	RNA1______	-1.09	2857696	2617780	RNA export	GTPase activating protein for Gsp1p
YNL292W	PUS4______	-1.18	318788	270845	tRNA processing	pseudouridine synthase
YOR032C	HMS1______	-1.15	172541	150433	pseudohyphal growth	similar to myc family of transcription factors
YPL010W	RET3______	-1.24	77941	62935	secretion	vesicle coat component
YPR105C	__________	+1.18	710481	839799	unknown	unknown
YBR083W	TEC1______	-1.05	321610	306458	pseudohyphal growth	trancriptional activator
YCR020C	PET18_____	+1.15	169586	195605	mitochondrial DNA maintenance	unknown
YDL200C	MGT1______	+1.22	188162	229511	DNA repair	6-O-methylguanine-DNA methylase
YDR319C	__________	+1.36	201747	273723	unknown	unknown
YER022W	SRB4______	+1.18	238418	280587	transcription	RNA polymerase II mediator subunit
YGL010W	__________	+1.20	152128	182445	unknown	unknown
YGR121C	MEP1______	+1.13	238824	270220	transport	ammonia permease
YHR136C	SPL2______	-1.26	473391	375230	cell cycle	protein kinase inhibitor
YJL010C	__________	-1.23	393635	319306	unknown	unknown
YKL009W	MRT4______	-1.22	2098238	1722973	mRNA decay	unknown
YLL010C	PSR1______	+1.03	421157	431883	salt tolerance (putative)	phosphatase
YLR315W	__________	+1.10	118968	130479	unknown	unknown
YNL102W	POL1______	-1.06	601155	567083	DNA replication	polymerase alpha 180 kD subunit
YOL010W	RCL1______	-1.21	625780	517273	unknown	putative RNA 3'-terminal phosphate cyclase
YOR220W	__________	+1.72	259789	448023	unknown	unknown
YPL199C	__________	+1.05	1047268	1101001	unknown	unknown
YAR069C	__________	-1.17	111025	95001	unknown	unknown
YBL020W	RFT1______	+1.17	166969	195048	cell cycle	unknown
YBR283C	SSH1______	+1.02	1550780	1588664	secretion	ER protein translocation complex subunit
YDL022W	GPD1______	+2.03	808031	1641491	glycerol metabolism	glycerol-3-phosphate dehydrogenas
YDR152W	__________	+1.05	813648	857238	unknown	unknown
YDR521W	__________	+1.16	131537	151982	unknown	unknown
YFL017C	GNA1______	+1.53	485970	745825	UDP-N-acetylglucosamine biosynthesis	glucosamine-phosphate N-acetyltransferase
YGL214W	__________	+1.15	136480	156690	unknown	unknown
YHL018W	__________	+1.23	92987	113925	unknown	unknown; similar to human pterin-4-alpha-carbinolamine
YIL112W	__________	+1.23	227081	279715	unknown	unknown; similar to ankyrin and coiled-coil proteins
YJL215C	__________	+1.19	97007	115474	unknown	unknown
YKL211C	TRP3______	-1.02	648677	633755	tryptophan biosynthesis	anthranilate synthase component II and indole-3-phosphate synthase
YLR145W	__________	+1.03	270580	279647	unknown	unknown
YML019W	OST6______	-1.17	86947	74220	protein glycosylation	putative N-oligosaccharyltransferase complex subunit
YMR246W	FAA4______	-1.64	2174911	1322627	fatty acid metabolism	long-chain-fatty-acid--CoA ligase
YNL304W	YPT11_____	+1.02	232333	237195	signaling (putative)	unknown; similar to Ypt1p and many other ras-like GTPases
YOR044W	__________	-1.13	160956	142989	unknown	unknown
YPL022W	RAD1______	+1.03	528302	545609	DNA repair, nucleotide excision	repairosome component
YPR117W	__________	-1.14	114239	99838	unknown	unknown
YBR093C	PHO5______	-1.33	4202674	3163685	phosphate metabolism	acid phosphatase, repressible
YCR030C	__________	+1.26	210150	264071	unknown	unknown
YDL212W	SHR3______	+1.65	673474	1113219	secretion; protein targeting, plasma membrane	ER membrane protein
YDR331W	GPI8______	+1.36	316285	429808	protein processing	transamidase (putative), GPI anchor attachment
YER034W	__________	+1.21	222518	269461	unknown	unknown
YGL022W	STT3______	-1.01	840754	830294	protein glycosylation	oligosaccharyltransferase complex assembly
YGR133W	PEX4______	+1.28	233597	299436	protein degradation, ubiquitin-mediated	E2 ub.-conjugating enzyme
YHR146W	__________	-1.29	1030632	795965	unknown	unknown; similar to pheromone adaptation protein Mdg1p
YJL022W	__________	+1.27	136338	173477	unknown	unknown
YKL021C	MAK11_____	-1.20	549840	458080	dsRNA virus propagation	unknown; essential gene
YLL022C	HIF1______	+1.11	479693	534771	chromatin structure	interacts with histone acetyltransferase
YLR327C	__________	+3.89	137534	535176	unknown	unknown; similar to Stf2p

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YMR064W	AEP1______	+1.03	402019	413988	protein synthesis(putative)	ATP9/OLI1 expression
YNL114C	__________	-1.13	964047	851342	unknown	unknown
YOL022C	__________	-1.32	972003	736589	unknown	unknown
YOR232W	MGE1______	-1.05	2146432	2045818	mitochondrial protein targeting	could change to: protein folding; mitochondrial chaperone (has a targeting phenotype, only b/c misfolded proteins accumulate in the mito., which backs the pathway up)
YPL211W	NIP7______	-1.48	1955842	1319401	rRNA processing	unknown
YBL032W	__________	-1.13	1042254	921695	unknown	unknown
YBR295W	PCA1______	+1.38	136989	188682	transport	Cu(2+) ATPase
YDL034W	__________	+1.18	124669	146810	unknown	unknown
YDR164C	SEC1______	+1.04	257692	268482	secretion	SNARE docking complex subunit (putative0
YDR533C	__________	+1.07	312048	332764	unknown	unknown
YFL027C	__________	+1.09	181718	198123	unknown	unknown
YHL030W	ECM29_____	+1.26	113006	142839	cell wall biogenesis	unknown
YIL124W	AYR1______	+1.31	701363	917108	lipid metabolism	1-Acyl dihydroxyacetone phosphate reductase
YJR003C	__________	+1.11	329604	366101	unknown	unknown; similar to human collagen alpha 3 (VI) chain
YKL223W	__________	+1.10	136520	149574	unknown	unknown
YLR157C	ASP3-2____	+1.35	1679156	2262170	asparagine utilization	L-asparaginase II
YMR259C	__________	-1.15	687242	598821	unknown	unknown
YNL316C	PHA2______	+1.05	243953	256728	phenylalanine biosynthesis	prephenate dehydratase
YOR056C	__________	-1.43	840889	586879	unknown	unknown
YPL034W	__________	+1.10	304154	335687	unknown	unknown
YPR129W	SCD6______	-1.13	897428	795010	secretion (putative)	suppressor of clathrin deficiency
YBR105C	VID24_____	+1.50	271307	407597	vacuolar protein targeting	peripheral vesicle membrane protein
YCR042C	TSM1______	+1.17	195667	229623	transcription	TFIID associated factor (TAF)
YDL224C	WHI4______	+1.13	228939	258742	cell size	putative RNA binding protein
YDR343C	HXT6______	+1.22	2673177	3253779	transport	hexose permease
YER044C	__________	+1.14	416947	473991	unknown	unknown
YGL034C	__________	+1.11	112636	124614	unknown	unknown
YGR145W	__________	-1.63	779634	477871	unknown	unknown; similar to MESA gene of Plasmodium falciparum
YHR158C	KEL1______	+1.12	101443	113225	unknown	null mutant has mating defect
YJL034W	KAR2______	+1.28	4174818	5329274	secretion	BiP homolog; ER protein translocation
YKL033W	__________	+1.07	141835	152350	unknown	unknown
YLL034C	__________	-1.37	473970	344711	unknown	unknown; similar to mammalian valosin-containing protein
YLR339C	__________	-1.59	9732093	6109162	unknown	unknown
YNL126W	SPC98_____	+1.06	200553	211643	cytoskeleton	spindle pole body component
YOL034W	__________	-1.01	295672	292076	unknown	unknown
YOR244W	ESA1______	+1.22	323341	394909	chromatin structure	histone acetyltransferase complex subunit
YPL223C	GRE1______	+1.27	142568	181659	unknown	unknown; induced by osmotic stress
YBL044W	__________	+1.11	121224	134095	unknown	unknown
YDL046W	__________	+1.02	569264	580957	unknown	unknown
YDR174W	HMO1______	+1.45	1472112	2134791	chromatin structure	non-histone protein
YDR545W	YRF1-1____	+1.16	3031526	3525992	unknown	Y' helicase (subtelomerically-encoded)
YFL037W	TUB2______	+1.08	951466	1028712	cytoskeleton	beta-tubulin
YGL237C	HAP2______	+1.04	530355	552459	transcription; respiration	transcription factor, activator of CYC1
YHL041W	__________	+1.08	94464	101587	unknown	unknown
YIL136W	OM45______	+1.38	377983	521572	(putative) mitochondrial organization	outer mitochondrial membrane protein
YJR014W	__________	-1.19	955186	804984	unknown	unknown
YKR010C	TOF2______	-1.07	287558	268812	DNA replication (putative)	interacts with DNA
YLR167W	RPS31_____	+1.05	16008005	16738064	protein synthesis	ribosomal protein S31
YML040W	__________	-1.50	7154236	4774608	unknown	unknown
YMR271C	URA10_____	+1.07	262892	280829	pyrimidine biosynthesis	orotate phosphoribosyltransferase
YNL328C	MDJ2______	+1.04	140081	145976	protein folding	mitochondrial chaperonin
YOR068C	__________	-1.04	156409	151076	unknown	unknown
YPL046C	ELC1______	+1.16	769167	895897	transcription	elongation factor Elongin C
YPR139C	__________	-1.03	598779	581708	unknown	unknown
YBR116C	__________	+1.12	106249	118651	unknown	unknown; similar to sea urchin NADH chain ND2
YCR054C	CTR86_____	-1.02	138630	135536	unknown	unknown
YDL236W	PHO13_____	+1.06	761965	809957	unknown	protein phosphatase and 4-nitrophenylphosphatase
YDR355C	__________	+1.06	105489	111340	unknown	unknown
YER055C	HIS1______	-1.38	3047900	2204375	histidine biosynthesis	ATP phosphoribosyltransferase
YGL046W	__________	-1.11	133060	120180	unknown	unknown
YGR157W	CHO2______	+1.13	619438	700816	phospholipid metabolism	phosphatidylethanolamine N-methyltransferase
YHR170W	NMD3______	-1.71	794173	463434	mRNA decay, nonsense-mediated	Nam7p/Upf1p-interacting protein
YJL047C	RTT101____	+1.07	499104	533772	transposition (putative)	unknown; regulator of Ty1 transposition
YKL044W	__________	-1.09	110952	101383	unknown	unknown
YLL046C	RNP1______	-1.06	90153	85029	unknown	ribonucleoprotein
YLR351C	NIT3______	-1.00	1014772	1010136	unknown	nitrilase
YNL138W	SRV2______	+1.05	1627096	1711818	signaling	adenylate cyclase-associated protein
YOL046C	__________	-1.06	153703	145135	unknown	unknown
YOR256C	__________	+1.16	275637	320132	unknown	unknown; similar to secretory protein Ssp134p
YPL235W	RVB2______	-1.05	1327850	1263748	unknown	unknown; similar to RUVB
YBL056W	PTC3______	+1.15	838442	960663	osmotic stress response (putative)	protein phosphatase
YDL058W	USO1______	-1.16	1191754	1029629	secretion	SNARE docking complex assembly
YDR185C	__________	+1.02	174596	178294	unknown	unknown; similar to Msf1p
YFL049W	__________	+1.32	199868	264743	unknown	unknown; similar to Npl6p
YGL249W	ZIP2______	+1.23	148721	183658	meiosis, synapsis	unknown
YIL148W	RPL40A____	+1.04	15954884	16582006	protein synthesis	ribosomal protein L40A
YKR022C	__________	+1.12	446725	500582	unknown	unknown
YLR179C	__________	-1.06	1649181	1552386	unknown	unknown; similar to Tfs1p
YML050W	__________	+1.11	191415	211760	unknown	unknown; similar to potato sucrose cleavage protein
YMR283C	RIT1______	+1.00	210020	210994	tRNA processing	initiator methionine tRNA 2'-O-ribosyl phosphate transferase
YNR001C	CIT1______	+1.57	690911	1084946	TCA cycle	citrate synthase
YOR080W	DIA2______	+1.21	212406	257883	pseudohyphal growth (putative)	unknown
YPL058C	PDR12_____	+1.05	162545	170669	drug resistance	transporter
YPR151C	__________	+1.15	129969	149942	unknown	unknown
YBR128C	APG14_____	+1.29	152912	197985	autophagy	unknown; interacts with Apg6p/Vps30p
YCR066W	RAD18_____	+1.18	164804	194859	DNA repair, postreplication	forms complex with Rad6p; putative ATPase
YDL248W	COS7______	+1.65	1163241	1913731	unknown	unknown; similar to other subtelomerically-encoded
YER065C	ICL1______	-1.03	179721	175043	glyoxylate cycle	isocitrate lyase
YGL058W	RAD6______	+1.22	579278	707231	protein degradation, ubiquitin-mediated	E2 ub.-conjugating enzyme
YGR165W	__________	+1.01	377527	382564	unknown	unknown
YHR182W	__________	-1.02	151014	147584	unknown	unknown
YJL059W	YHC3______	+1.16	285345	330165	unknown	unknown; similar to human Batten disease-related protein
YKL056C	__________	-1.19	13593530	11386255	unknown	unknown
YLL058W	__________	-1.14	3018283	2658091	unknown	unknown; similar to Neurospora crassa O-succinylhomoserine
YLR363C	NMD4______	-1.06	383005	360530	unknown	Nam7p/Upf1p-interacting protein
YMR098C	__________	-1.00	350353	348899	unknown	unknown
YNL150W	__________	-1.18	1683992	1430839	unknown	unknown
YOL056W	GPM3______	-1.08	554538	511950	glycolysis	phosphoglycerate mutase
YOR268C	__________	+1.05	116237	121906	unknown	unknown
YPL247C	__________	-1.10	199787	180974	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YBL068W	PRS4______	+1.03	338584	348176	pentose phosphate cycle	ribose-phosphate pyrophosphokinase
YDL070W	BDF2______	+1.53	843136	1293459	unknown	unknown; similar to mammalian glycogen
YDR197W	CBS2______	+1.22	209257	255901	protein synthesis	translation activator of COB mRNA
YFL061W	__________	+1.21	137934	166412	unknown	unknown; similar to E. coli cyanamide hydratase (urea
YGL261C	__________	+1.20	337111	404090	unknown	unknown; similar to Pau1p and members of the PAU1
YHR012W	VPS29_____	+1.10	625333	687617	vacuolar protein targeting	targets vacuolar receptor, Vps10
YIL159W	BNR1______	-1.05	1487274	1414306	cytoskeleton	actin filament organization
YJR037W	__________	+1.09	95888	104281	unknown	unknown
YKR034W	DAL80_____	+1.11	113001	125136	nitrogen catabolism	transcription factor
YLR191W	PEX13_____	+1.07	319842	341816	peroxisomal protein targeting	docks peroxisomal protein receptor
YML061C	PIF1______	-1.04	188297	180928	DNA repair, mitochondrial	DNA helicase
YMR294W	JNM1______	+1.12	295905	331702	mitosis, nuclear migration	unknown
YNR013C	__________	+1.03	988210	1016170	unknown	unknown; major facilitator superfamily
YOR092W	ECM3______	-1.12	344254	307192	cell wall biogenesis	unknown
YPL068C	__________	+1.12	290877	324473	unknown	unknown
YPR159W	KRE6______	-1.04	492877	475645	cell wall biogenesis	glucan synthase subunit
YBR140C	IRA1______	-1.11	134360	121467	signaling, Ras pathway	GTPase-activating protein for Ras1p and Ras2p
YCR077C	PAT1______	-1.11	611035	549079	mitosis; chromosome transmission	topoisomerase II
YDR012W	RPL4B_____	-1.13	15210766	13423779	protein synthesis	ribosomal protein L4B
YDR377W	ATP17_____	+1.53	715844	1092432	ATP synthesis	ATP synthase subunit f
YER074W	RPS24A____	+1.06	14793181	15668409	protein synthesis	ribosomal protein S24A
YGL070C	RPB9______	-1.00	643677	641229	transcription	RNA polymerase II 14.2 subunit
YGR177C	ATF2______	-1.38	236199	171666	acetate ester biosynthesis	alcohol acetyltransferase
YHR194W	__________	+1.17	171895	201283	unknown	unknown
YJL071W	ARG2______	-1.01	206944	205753	arginine biosynthesis	acetylglutamate synthase
YKL068W	NUP100____	-1.04	147387	141230	nuclear protein targeting	nuclear pore protein
YLR003C	__________	-1.48	669326	452830	unknown	unknown
YLR375W	STP3______	+1.08	552752	597617	tRNA splicing	unknown
YMR110C	__________	+1.23	332879	410139	unknown	unknown; similar to aldehyde dehydrogenase
YNL162W	RPL42A____	+1.07	14227869	15219231	protein synthesis	ribosomal protein L42A
YOL068C	HST1______	+1.11	1005128	1115534	silencing	Sir2p homolog
YOR280C	__________	+1.02	438301	448271	unknown	unknown; similar to S. pombe dihydrofolate reductase
YMR325W	__________	+1.18	372997	439187	unknown	unknown
YBL080C	PET112____	-1.04	121056	116575	protein synthesis	translation of COX2 mRNA (mitochondrial)
YDL082W	RPL13A____	-1.13	11960432	10570590	protein synthesis	ribosomal protein L13A
YDR209C	__________	+1.45	413209	599653	unknown	unknown
YFR005C	SAD1______	+1.05	341656	358066	mRNA splicing, snRNP assembly	unknown
YGR010W	__________	-1.10	251051	228668	unknown	unknown
YHR023W	MYO1______	+1.09	342059	374469	cell wall biosynthesis	myosin heavy chain
YIL171W	HXT12_____	-1.07	143931	134711	transport	hexose permease
YJR049C	UTR1______	-1.16	525206	453206	unknown	putative ferric reductase
YKR046C	__________	+1.04	756016	783038	unknown	unknown
YLR203C	MSS51_____	+1.03	558769	574296	mRNA splicing, COX1 and COB mRNA	unknown
YL16A;_	__________	+1.18	190826	225836
YNR025C	__________	+1.18	576186	680471	unknown	unknown
YOR104W	__________	+1.37	359688	493818	unknown	unknown
YPL080C	__________	+1.23	360597	441892	unknown	unknown
YPR171W	__________	+1.06	339112	360436	unknown	unknown
YBR152W	SPP381____	+1.01	161853	163041	mRNA processing (putative)	U4/U6,U5 snRNP protein
YCR089W	FIG2______	-1.12	125422	112440	mating	extracellular, cell wall protein
YDR024W	__________	+1.02	153581	157141	unknown	unknown
YDR389W	SAC7______	+1.20	203840	243934	signaling	GTPase-activating protein for Rho1p
YER086W	ILV1______	-1.24	548516	442409	isoleucine and valine biosynthesis	threonine deaminase
YGL082W	__________	+1.08	343880	370154	unknown	unknown
YGR189C	CRH1______	+2.81	1836697	5169051	cell wall biogenesis (putative)	unknown; cell wall protein
YHR206W	SKN7______	+1.18	335905	394790	oxidative stress	transcription factor
YJL083W	__________	+1.09	182233	198990	unknown	unknown; similar to Irs4p
YKL080W	VMA5______	-1.12	1463890	1307683	vacuolar acidification	vacuolar H+-ATPase V1 sector subunit
YLR015W	BRE2______	-1.15	381188	331012	secretion (putative)	unknown; brefeldin A sensitive
YLR387C	__________	+1.19	584161	694384	unknown	unknown
YMR121C	RPL15B____	-1.02	15982947	15658008	protein synthesis	ribosomal protein L15B
YNL174W	__________	-1.42	1430464	1004598	unknown	unknown
YOL080C	REX4______	-1.11	537614	483858	RNA processing	RNA exonuclease
YOR292C	__________	+1.01	347016	351069	unknown	unknown
YPL268W	PLC1______	-1.38	407430	294342	signaling	phosphoinositide-specific phospholipase C
YBL092W	RPL32_____	-1.02	6293355	6146996	protein synthesis	ribosomal protein L23
YDL094C	__________	+1.09	144849	157418	unknown	unknown
YDR217C	RAD9______	+1.04	100710	105135	DNA repair; DNA damage checkpoint	unknown
YFR017C	__________	+1.45	149625	216708	unknown	unknown
YGR022C	__________	-1.27	88999	70124	unknown	unknown
YHR035W	__________	-1.16	103307	89043	unknown	unknown; similar to Sec23p, expressed under
YIR005W	IST3______	-1.06	184145	173764	salt tolerance (putative)	unknown
YJR061W	__________	+1.07	276212	295869	unknown	unknown
YKR058W	GLG1______	+1.01	195091	197857	glycogen metabolism	glycogen synthesis initiator
YLR215C	CDC123____	-1.06	278789	264050	unknown	unknown
YMR315W	__________	+1.59	1006508	1596244	unknown	unknown
YNR037C	__________	+1.21	567718	689111	unknown	unknown; similar to prokaryotic ribosomal protein S19
YOR116C	RPO31_____	-1.23	1380840	1122435	transcription	RNA polymerase III 160 kD subunit
YPL092W	SSU1______	-1.43	631410	440414	sulfite tolerance	unknown; plasma membrane protein, major facilitator superfamily
YPR183W	DPM1______	-1.01	101526	100381	protein glycosylation	dolichol phosphate mannose synthase
YBR163W	DEM1______	+1.09	177274	193061	cell morphology (putative)	unknown; similar to Pta1p
YCR100C	__________	-1.05	72710	68988	unknown	unknown; similar to Pep1p, probably represents a fragmented coding region of a pseudogene
YDR401W	__________	-1.07	98350	91934	unknown	unknown
YER096W	SHC1______	-1.00	97573	97091	sporulation	unknown; may be involved in chitin synthesis
YGL094C	PAN2______	+1.01	121716	122590	mRNA processing	Pab1p-dependent poly(A) ribonuclease subunit
YGR201C	__________	-1.04	262756	251578	unknown	unknown; similar to translation elongation factors
YHR215W	PHO12_____	-2.20	6277023	2849989	phosphate metabolism	secreted acid phosphatase
YJL095W	BCK1______	-1.40	125164	89354	signaling, PKC1 pathway	serine-threonine protein kinase
YKL092C	BUD2______	-1.33	121300	91358	bud site selection	GTPase-activating protein for Rsr1p/Bud1p
YLR027C	AAT2______	-1.04	2238201	2146603	aspartate metabolism	aspartate aminotranferase,
YLR399C	BDF1______	-1.04	892063	859598	meiosis	putative chromatin component
YMR133W	REC114____	+1.05	206059	217038	meiosis, recombination	ds break formation complex subunit
YNL186W	UBP10_____	-1.13	644744	568221	protein degradation, ubiquitin-mediated	ubiquitin C-terminal hydrolase
YOL092W	__________	-1.01	105164	104107	unknown	unknown
YOR303W	CPA1______	-1.11	1007965	904308	arginine biosynthesis	carbamoyl phosphate synthetase, arginine specific
YPL280W	__________	-1.01	99580	98297	unknown	unknown
YAL012W	CYS3______	+1.16	1133287	1314628	methionine biosynthesis	cystathionine gamma-lyase
YBR176W	ECM31_____	+1.16	228268	264556	cell wall biogenesis	unknown
YCRX06W	__________	+1.06	145439	153441
YDR047W	HEM12_____	+1.31	497750	652398	heme biosynthesis	uroporphyrinogen decarboxylase

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YDR414C	ERD1______	+1.21	252161	304735	secretion	ER protein retention
YER109C	FLO8______	+1.05	114422	120518	flocculation (and PHD)	FLO1 activator
YGL107C	__________	+1.06	97492	103319	unknown	unknown
YGR214W	RPS0A_____	-1.07	13865484	12990122	protein synthesis	ribosomal protein S0A
YIL011W	__________	-1.03	283760	274868	unknown	unknown; similar to Yil176p, Yir041p and other members of
YJL108C	__________	+1.66	185514	308850	unknown	unknown
YKL104C	GFA1______	+2.36	901465	2124445	cell wall biogenesis	chitin biosynthesis
YLR038C	COX12_____	+1.41	610792	858645	oxidative phosphorylation	cytochrome-c oxidase, subunit VIb
YMR145C	__________	+1.66	1455199	2416188	unknown	unknown; similar to rotenone-insensitive NADH-ubiquinone
YNL199C	GCR2______	+1.05	378629	396196	glycolysis	transcriptional activator
YOR315W	__________	-1.07	332583	309948	unknown	unknown
YPR010C	RPA135____	-1.81	2527086	1395504	transcription	RNA polymerase I 135 kD subunit
YBL103C	RTG3______	+1.08	156470	169460	glyoxylate cycle	CIT2 regulator
YCL010C	__________	+1.01	125973	126746	unknown	unknown
YDL107W	MSS2______	+1.23	197855	242926	mRNA splicing, COX1 mRNA	unknown
YDR230W	__________	+1.57	230194	360650	unknown	unknown
YEL011W	GLC3______	+1.45	142155	206700	cell wall biogenesis	glycogen branching enzyme
YFR030W	MET10_____	+1.40	272574	381235	sulfate assimilation	sulfite reductase subunit
YGR033C	__________	+1.13	419373	472433	unknown	unknown
YHR047C	AAP1______	-1.13	247854	220196	protein degradation	arginine/alanine aminopeptidase
YJR074W	MOG1______	-1.03	389368	376937	unknown	unknown; interacts with Gsp1p
YKR071C	__________	-1.07	907195	848599	unknown	unknown
YML097C	VPS9______	-1.26	374231	296121	vacuolar protein targeting	similar to mammalian ras inhibitors
YNL011C	__________	-1.09	224503	205773	unknown	unknown
YNR050C	LYS9______	-1.11	832673	747592	lysine biosynthesis	saccharopine dehydrogenase
YOR129C	__________	-1.22	266579	217964	unknown	unknown
YPL105C	__________	-1.24	74735	60405	unknown	unknown; similar to Smy2p
YPR196W	__________	-1.06	237906	223991	unknown	regulates MAL genes (YPD)
YAL024C	LTE1______	+1.11	129121	142730	cell cycle	GDP/GTP exchange factor
YBR188C	NTC20_____	+1.31	256076	336122	mRNA splicing	Prp19p-associated complex protein
YCRX18C	__________	+1.09	207605	225494
YDR059C	UBC5______	+1.67	195399	325495	protein degradation, ubiquitin-mediated	E2 ub.-conjugating enzyme
YDR426C	__________	+1.43	199502	284292	unknown	unknown
YER120W	SCS2______	-1.10	1794760	1626613	inositol metabolism	regulator of INO1 expression
YGL119W	ABC1______	+1.16	155263	180428	respiration	ubiquinol-cyt.-c reductase assembly protein
YGR226C	__________	+1.48	103873	154035	unknown	unknown
YIL022W	TIM44_____	-1.20	571281	477484	mitochondrial protein targeting	inner membrane translocase component
YJL120W	__________	+1.00	143880	144366	unknown	unknown
YKL116C	__________	+1.21	128152	154954	unknown	putative protein kinase
YLR050C	__________	+1.16	362006	418313	unknown	unknown; similar to C-terminal region of human MAC30
YLR422W	__________	-1.06	555088	524254	unknown	unknown
YMR156C	__________	+1.01	190969	193419	unknown	unknown
YNL211C	__________	+1.04	181558	188272	unknown	unknown
YOL115W	TRF4______	-1.14	276173	241220	mitosis, chromosome condensation	unknown
YOR327C	SNC2______	+1.26	1213971	1526358	secretion	post-Golgi v-SNARE
YPR022C	__________	+1.15	341975	393502	unknown	unknown
YBR002C	RER2______	+1.11	528277	588624	protein glycosylation	cis-prenytransferase
YCL023C	__________	+1.11	123557	136990	unknown	unknown
YDL119C	__________	+1.07	816575	870457	unknown	unknown
YEL022W	GEA2______	+1.18	639442	755397	secretion	GDP/GTP exchange factor for ARF
YFR039C	__________	+1.12	165977	186192	unknown	unknown
YGR040W	KSS1______	+1.18	162071	190460	pheromone signal transduction	protein kinase
YHR057C	CYP2______	+1.24	929359	1151202	protein folding	peptidyl-prolyl cis-trans isomerase
YIR027C	DAL1______	+1.34	136534	182750	allantoin utilization	allantoinase
YJR087W	__________	+1.24	549071	682041	unknown	unknown
YKR083C	__________	+1.22	245350	300146	unknown	unknown; similar to paramyosin
YLR238W	__________	+1.27	232025	293826	unknown	unknown
YML107C	__________	-1.03	313428	304427	unknown	unknown
YNL023C	FAP1______	-1.24	347368	279293	transcription (putative)	FKBP12-binding protein
YNR062C	__________	-1.21	135147	111562	unknown	unknown; similar to Haemophilus influenzae L-lactate
YOR141C	ARP8______	-1.17	137434	117892	cytoskeleton (putative)	actin-related protein
YPL117C	IDI1______	-1.09	1173595	1074417	isoprenoid biosynthesis	isopentenyl-diphosphate delta-isomerase
YAL034C	FUN19_____	+1.08	188386	203826	unknown	unknown
YBR200W	BEM1______	+1.14	410728	469804	bud emergence	binds Cdc24p
YDR071C	__________	+1.28	1366086	1753771	unknown	unknown
YDR438W	__________	+1.11	284773	316594	unknown	unknown
YER132C	PMD1______	+1.10	758652	833476	meiosis	gene expression regulator (putative)
YGL131C	__________	-1.12	3914743	3488578	unknown	unknown
YGR238C	KEL2______	+1.23	134446	164938	unknown	unknown; similar to Kel1p and Kel3p
YIL034C	CAP2______	+1.18	700612	826477	cytoskeleton	F-actin capping protein subunit
YJL132W	__________	+1.37	155234	213228	unknown	unknown; similar to phospholipase D
YKL128C	PMU1______	-1.20	746347	623192	unknown	phosphomutase homolog; suppresses ts tps2 mutant
YLR062C	__________	-1.05	8432503	8015431	unknown	unknown
YLR432W	IMD3______	-1.83	3606089	1965637	unknown	unknown; similar to Pur5p and inosine-5'-monophosphate dehydrogenase of human and E. coli
YMR167W	MLH1______	+1.08	271915	293278	DNA repair	MutL homolog; mismatch repair
YNL223W	AUT2______	+1.17	184801	217088	autophagy	microtubule-associated protein (putative)
YOL127W	RPL25_____	+1.01	14717046	14910061	protein synthesis	ribosomal protein L25
YOR339C	UBC11_____	-1.09	584238	534644	protein degradation, ubiquitin-mediated (putative)	homolog of ubiquitin carrier protein E2-C
YPR034W	ARP7______	-1.13	816161	720609	cytoskeleton (putative)	actin-related protein
YBR012W	TY1B______	+1.05	16008005	16738064	unknown	unknown
YCL035C	GRX1______	-1.28	3181671	2483134	oxidative stress response	glutaredoxin
YDR254W	CHL4______	-1.41	862796	611907	mitosis, chromosome segregation	unknown
YEL034W	HYP2______	-1.06	8213165	7759894	protein synthesis	translation initiation factor eIF5A
YFR051C	RET2______	-1.11	2180641	1959928	secretion	vesicle coat component
YGR052W	__________	+1.12	216542	243101	unknown	unknown
YHR068W	DYS1______	-1.50	1357775	903507	hypusine biosynthesis	deoxyhypusine synthase
YIR039C	YPS6______	+1.60	137842	220656	protein degradation	GPI-anchored aspartic protease
YJR098C	__________	+1.20	140753	169299	unknown	unknown
YKR095W	MLP1______	+1.06	95345	100634	DNA repair (putative)	myosin-like protein
YLR250W	SSP120____	+1.36	1028498	1403282	secretion	unknown
YML118W	__________	+1.22	132698	162301	unknown	unknown
YNL035C	__________	-1.09	499414	456711	unknown	unknown
YNR074C	__________	-1.28	210652	164373	unknown	unknown; similar to Bacillus subtilis nitrite reductase
YOR151C	RPB2______	-1.06	1412172	1334134	transcription	RNA polymerase II 140 kDa subunit
YPL129W	ANC1______	+1.13	1223503	1385388	transcription	TFIIF 30 kD subunit
YAL044C	GCV3______	-1.21	213009	175351	glycine metabolism	glycine decarboxylase
YBR212W	NGR1______	+1.23	529546	648715	unknown	glucose-repressible RNA-binding protein
YDR083W	__________	-1.28	936738	729003	unknown	unknown
YDR450W	RPS18A____	+1.03	14922303	15382905	protein synthesis	ribosomal protein S18A
YER142C	MAG1______	-1.03	488326	473792	DNA repair	3-methyladenine DNA glycosylase

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YGL143C	MRF1______	+1.06	291335	308117	protein synthesis	mitochondrial peptide chain release factor
YGR250C	__________	+1.45	322604	468287	unknown	unknown
YIL046W	MET30_____	+1.09	293924	320937	sulfur amino acid metbolism	F-box transcription factor
YJL144W	__________	+1.96	164889	322519	unknown	unknown
YKL140W	TGL1______	+1.05	238319	249770	glycerolipid metabolism	triglyceride lipase-cholesterol esterase
YLR074C	__________	-1.43	690687	482155	unknown	unknown
YLR444C	__________	+1.19	320871	382777	unknown	unknown
YMR177W	MMT1______	+1.05	333169	348405	mitochondrial iron transport	transmembrane domain (4) protein
YNL235C	__________	+1.24	391759	486911	unknown	unknown
YOL139C	CDC33_____	-1.19	4249140	3558276	protein synthesis	translation initiation factor eIF4E
YOR349W	CIN1______	-1.01	168538	166732	mitosis, chromosome segregation	unknown
YPR046W	MCM16_____	-1.01	495707	489665	mitosis,chromosome segregation	unknown
YBR024W	SCO2______	+1.03	91151	94114	respiration	Cox1p and Cox2p stability (putative)
YCL047C	__________	+1.28	236500	302718	unknown	unknown
YDL141W	BPL1______	+1.03	295111	303986	protein processing	biotin:apoprotein ligase
YDR262W	__________	+1.16	434394	501865	unknown	unknown
YEL046C	GLY1______	-1.26	803954	640405	glycine, serine, and threonine metabolism	L-threonine aldolase
YGR064W	__________	+1.32	425903	563878	unknown	unknown
YHR079C	IRE1______	+1.00	98317	98591	protein folding	sensor of unfolded proteins in the ER
YJR110W	__________	+1.15	247825	285897	unknown	unknown
YLR259C	HSP60_____	-1.10	2910093	2641230	protein folding	mitochondrial chaperonin
YML130C	ERO1______	-1.02	596867	583975	protein folding	protein disulfide bond formation in the ER
YNL045W	__________	+1.13	573169	646240	unknown	unknown; similar to leukotriene A4 hydrolases and zinc-containing aminopeptidases
YOR163W	DDP1______	+1.09	1337441	1463205	dinucleoside polyphosphate metabolism	diadenosine and diphosphoinositol polyphosphate phosphohydrolase
YPL141C	__________	+1.03	95031	97913	unknown	unknown; similar to Kin4p
YAL058W	CNE1______	-1.19	323169	271889	secretion	calnexin and calreticulin homolog
YBR224W	__________	+1.06	92677	98180	unknown	unknown
YDR095C	__________	+1.23	114251	140600	unknown	unknown
YDR462W	MRPL28____	+1.18	266308	315263	protein synthesis	ribosomal protein, mitochondrial L28
YER152C	__________	+1.08	398018	431644	unknown	unknown
YGL155W	CDC43_____	-1.01	164224	163186	protein processing	geranylgeranyltransferase subunit
YGR262C	__________	+1.20	455244	545300	unknown	unknown; similar to apple tree calcium/calmodulin-binding
YIL058W	__________	-1.02	231088	227237	unknown	unknown
YJL156C	SSY5______	-1.00	189889	189495	transport, amino acid (putative)	unknown
YKL152C	GPM1______	+1.05	15895492	16639131	glycolysis	phosphoglycerate mutase
YLR086W	SMC4______	+1.17	271157	316435	mitosis, chromosome condensation and segregation	unknown
YLR456W	__________	+1.11	197108	219104	unknown	unknown
YMR189W	GCV2______	+1.07	106136	113615	amino acid metabolism	glycine decarboxylase P subunit
YNL247W	__________	-1.02	94122	91929	protein synthesis	tRNA synthetase, cysteinyl
YOL151W	GRE2______	+1.27	632080	802591	unknown	unknown; induced by osmotic stress
YOR361C	PRT1______	-1.38	1860076	1346959	protein synthesis	translation initiation factor eIF3 subunit
YPR058W	YMC1______	-1.10	728183	664440	transport	(putative) mitochondrial carrier
YBR036C	CSG2______	+1.28	963475	1231119	sphingolipid metabolism	mannosylation
YCL059C	KRR1______	-1.36	1187660	871891	unknown	essential
YDL153C	SAS10_____	-1.49	873390	585855	silencing	nuclear protein, reulator of silencing at HML, HMR, telomeres
YDR274C	__________	-1.09	180023	165621	unknown	unknown
YEL058W	PCM1______	+1.78	900496	1606173	aminosugars metabolism	phosphoacetylglucosamine mutase
YGR076C	MRPL25____	+1.11	216398	239553	protein synthesis	ribosomal protein, mitochondrial L25
YHR090C	YNG2______	+1.13	255642	288120	chromatin structure	histone acetyltransferase complex subunit
YJR122W	CAF17_____	+1.06	275856	291888	catabolite repression	component of CCR4 transcriptional complex
YLR270W	__________	+1.36	439854	598376	unknown	unknown
YMR009W	__________	+1.03	146061	151122	unknown	unknown; similar to MMSAB operon regulatory protein
YNL055C	POR1______	-1.08	5243253	4845696	transport	mitochondrial outer membrane porin
YOR175C	__________	-1.15	974480	849591	unknown	unknown
YPL153C	RAD53_____	-1.03	146365	142280	cell cycle, checkpoint	protein kinase
YAR002C	ERP1______	+1.01	100364	101819	membrane trafficking; secretion (putative)	unknown
YBR236C	ABD1______	+1.21	478351	578863	mRNA capping	mRNA cap methyltransferase
YDR105C	__________	+1.16	352975	408206	unknown	unknown
YDR474C	__________	+1.15	263367	303438	unknown	unknown
YER162C	RAD4______	+1.12	186317	208995	DNA repair, nucleotide excision	repairosome component
YGL167C	PMR1______	+1.11	261257	290599	transport	Ca(2+) ATPase
YGR274C	TAF145____	+1.16	140424	162762	transcription	TFIID 145 kD subunit
YJL168C	SET2______	-1.10	383838	347677	galactose regulation	transcriptional repressor of Gal4
YKL164C	PIR1______	+1.53	5458346	8337616	unknown	unknown; Pir1p/Hsp150p/Pir3p family
YLR098C	CHA4______	+1.20	154297	185840	ser/thr metabolism	CHA1 activator
YMR200W	ROT1______	+1.40	572460	800393	cytoskeleton	unknown
YNL259C	ATX1______	+1.29	398849	514281	oxidative stress response	unknown
YOL163W	__________	+1.08	141167	153083	unknown	unknown; similar to Pseudomonas putida phthalate transporter
YOR373W	NUD1______	-1.04	133867	128365	chromatin structure	nucleosome assembly protein
YPR070W	MED1______	-1.01	127524	126730	transcription	RNA polymerase II mediator subunit
YBR048W	RPS11B____	-1.01	15720315	15507027	protein synthesis	ribosomal protein S11B
YCL074W	__________	+1.01	606588	610274	unknown	unknown
YDL165W	CDC36_____	-1.08	416470	384397	transcription	general negative regulator
YDR286C	__________	+1.42	268822	381537	unknown	unknown
YEL069C	HXT13_____	+1.17	290023	338585	transport	hexose permease
YGR088W	CTT1______	+1.31	141711	184950	oxidative stress response	catalase T
YHR102W	KIC1______	+1.22	124379	151536	mitosis (putative)	protein kinase; interacts with Cdc31p
YJR134C	SGM1______	+1.26	258584	325226	unknown; growth on galactose or mannose	unknown
YLR282C	__________	+1.01	88576	89371	unknown	unknown
YMR021C	MAC1______	+1.10	355905	390566	metal-dependent gene regulation	transcription factor
YNL067W	RPL9B_____	-1.02	15653957	15407645	protein synthesis	ribosomal protein L9B
YOR187W	TUF1______	-1.00	141152	141033	protein synthesis	translation elongation factor Tu, mitochondrial
YPL165C	__________	+1.07	306339	328523	unknown	unknown
YAR023C	__________	-1.10	148214	134754	unknown	unknown; similar to subtelomerically-encoded proteins
YBR248C	HIS7______	-1.10	951374	866454	histidine biosynthesis	glutamine amidotransferase:cyclase
YDR117C	__________	+1.13	389554	441575	unknown	unknown
YDR486C	__________	+1.21	474593	574101	unknown	unknown; similar to Snf7p
YGL179C	__________	-1.01	112343	110994	unknown	putative protein kinase
YGR286C	BIO2______	-1.69	569527	337204	biotin biosynthesis	biotin synthetase
YIL079C	__________	-1.30	564762	433068	unknown	unknown; similar to gag polyprotein
YJL180C	ATP12_____	+1.23	319040	393428	ATP synthesis	F1F0-ATPase complex assembly
YKL176C	LST4______	-1.06	601347	568541	secretion	unknown; involved in secretion of nitroge- regulated permease
YLR110C	__________	+1.05	16008005	16738064	unknown	unknown; similar to Flo1p, Fig2p, Flo5p, Yal063p, and Ykr102p
YMR212C	EFR3______	-1.07	1249631	1172309	unknown	unknown; similar to myosin heavy chains; null requires PHO85
YNL271C	BNI1______	+1.09	214365	233151	bud site selection, bipolar	interacts with Rho1p
YOR009W	__________	+1.47	1020298	1497202	unknown	unknown; similar to PAU1 family
YOR385W	__________	+1.33	397503	529247	unknown	unknown
YPR082C	DIB1______	+1.12	634600	708459	unknown	unknown; similar to S. pombe dim1+
YBR060C	ORC2______	+1.01	410648	416727	DNA replication	origin recognition complex, 72 kD subunit
YCLX10C	__________	-1.76	1292586	733887

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YDL177C	__________	+1.12	296744	331478	unknown	unknown
YDR298C	ATP5______	+1.39	927696	1293638	ATP synthesis	F1F0-ATPase subunit
YER003C	PMI40_____	+1.10	952648	1045341	mannose metabolism	mannose-6-phosphate isomerase
YGR100W	MDR1______	-1.11	107663	96875	unknown	unknown
YHR114W	BZZ1______	-1.19	647894	543412	cytoskeleton (putative)	actin assembly complex component
YJR146W	__________	-1.28	197659	154482	unknown	unknown
YLR293C	GSP1______	-1.14	9860215	8670689	nuclear protein targeting	GTP-binding protein, ras superfamily
YMR032W	HOF1______	+1.00	451176	452855	cytokinesis	unknown
YNL079C	TPM1______	+1.13	3289743	3710929	cytoskeleton	tropomyosin
YOR197W	__________	-1.09	1217730	1116626	unknown	unknown
YPL177C	CUP9______	-1.12	988962	883837	Cu2+ ion homeostasis	putative DNA binding protein
YAR044W	OSH1______	+1.03	480534	494566	sterol biosynthesis (putative)	similar to human oxysterol binding protein
YBR260C	RGD1______	+1.03	332618	342976	unknown	GTPase-activating (GAP) protein (putative)
YDR129C	SAC6______	+1.02	1032655	1049964	cytoskeleton	fimbrin homolog
YDR498C	SEC20_____	+1.06	371204	392541	secretion	unknown; ER membrane protein
YER184C	__________	+1.18	150050	177349	unknown	unknown; similar to transcription factors, has Zn[2]-Cys[6]
YGL191W	COX13_____	+1.20	853010	1024006	oxidative phosphorylation	cytochrome-c oxidase subunit VIa
YIL090W	__________	-1.52	456942	299731	unknown	unknown
YJL192C	__________	-1.31	872762	667279	unknown	unknown; similar to E. coli
YKL188C	PXA2______	-1.09	159643	147076	transport	peroxisomal fatty acid transporter, ABC family
YLR122C	__________	-1.10	90888	82774	unknown	unknown
YNL283C	WSC2______	+1.10	296374	325577	cell wall biogenesis	alpha-1,4-glucan-glucosidase
YOR021C	__________	-1.18	1257338	1069124	unknown	unknown
YPR094W	__________	+1.12	293577	328455	unknown	unknown
YBR072W	HSP26_____	+1.00	85282	85641	diauxic shift	stress-induced protein
YCR010C	__________	+1.25	125794	157516	unknown	unknown
YDL189W	__________	-1.01	432004	429612	unknown	unknown
YDR310C	SUM1______	-1.12	139699	125205	silencing	nuclear protein
YER013W	PRP22_____	+1.04	263615	275206	mRNA splicing	RNA helicase
YGR110W	__________	+1.23	116002	143143	unknown	unknown
YHR126C	__________	-1.21	60804	50120	unknown	unknown; similar to members of the Pir1p/Hsp150p/Pir3p
YJR158W	HXT16_____	-1.22	153393	125848	transport	hexose permease
YLR305C	STT4______	-1.23	64539	52640	signaling, PKC1 pathway	phosphatidylinositol-4-kinase
YMR044W	IOC4______	+1.11	450638	498252	unknown	unknown
YNL091W	__________	+1.01	96595	97131	unknown	unknown; similar to Uso1p and human NF2 neurofibromatosis
YOR209C	NPT1______	+1.13	2009141	2268678	NAD biosynthesis	nicotinate phosphoribosyltransferase
YPL188W	POS5______	+1.20	267489	321613	unknown	unknown; similar to Utr1p and Yel041p
YBL009W	__________	-1.10	131218	119504	unknown	unknown
YBR272C	HSM3______	+1.26	238150	301159	mismatch repair	unknown; MutS homolog
YDL011C	__________	+1.14	202424	229873	unknown	unknown
YDR141C	DOP1______	+1.19	934108	1115296	unknown	unknown; similar to Yps1p and E. nidulans dopA
YDR510W	SMT3______	+1.41	1972604	2772967	protein degradation	ubiquitin-like protein
YFL009W	CDC4______	+1.19	648498	771176	cell cycle	SCF-Cdc4p complex component
YGL203C	KEX1______	+1.02	823463	838051	secretion	carboxypeptidase (YSC-alpha)
YIL101C	XBP1______	+1.27	150627	190674	stress response	transcriptional repressor
YJL204C	__________	+1.12	1128407	1261302	unknown	unknown; similar to Tor2p, member of a family of
YKL200C	__________	-1.07	156856	146947
YLR134W	PDC5______	+1.06	15276070	16199308	glycolysis	pyruvate decarboxylase
YMR236W	TAF17_____	-1.13	824541	731653	transcription	TFIID 17 kD subunit
YNL293W	MSB3______	-1.20	65248	54553	unknown	unknown; suppresses bud emergence mutant
YOR033C	DHS1______	-1.00	298246	297222	DNA repair	exonuclease; also recombination
YPL011C	TAF47_____	-1.30	65740	50475	transcription	component of TAF(II) complex
YPR106W	ISR1______	-1.20	64525	53855	staurosporine resistance	protein kinase
YBR084C	RPL19A____	+1.12	14847106	16649910	protein synthesis	ribosomal protein L19A
YCR021C	HSP30_____	+1.41	1135645	1605627	diauxic shift	plasma membrane heat shock protein
YDL201W	__________	+1.02	676709	692409	unknown	unknown
YDR320C	__________	+1.37	369552	506088	unknown	unknown; similar to human transformation-sensitive
YER023W	PRO3______	-1.02	1347238	1319690	proline biosynthesis	delta 1-pyrroline-5-carboxylate reductase
YGL011C	SCL1______	+1.42	1726033	2458246	protein degradation	20S proteasome subunit YC7ALPHA/Y8
YGR122W	__________	+1.12	270959	303101	unknown	unknown
YHR137W	ARO9______	-1.74	853847	490752	aromatic amino acid metabolism	aromatic amino acid aminotransferase II
YJL011C	__________	+1.05	332374	348990	unknown	unknown
YKL010C	UFD4______	+1.10	100101	110404	protein degradation, ubiquitin-mediated	unknown; may influence multi-Ub chain topology
YLL011W	SOF1______	-1.26	530726	420789	rRNA processing	nucleolar snRNP protein
YLR316C	TAD3______	+1.14	277440	315445	tRNA processing	tRNA-specific adenosine deaminase subunit
YMR053C	STB2______	+1.08	143478	155201	unknown	binds Sin3p
YNL103W	MET4______	+1.01	385776	387888	sulfur amino acid metabolism	transcriptional activator
YOL011W	PLB3______	-1.34	68093	50709	phospholipid metabolism	phospholipase B
YOR221C	MCT1______	-1.32	431274	327638	fatty acid metabolism	malonyl-CoA:ACP transferase
YPL200W	__________	-1.26	119152	94722	unknown	unknown
YAR070C	__________	-1.31	126407	96786	unknown	unknown
YBL021C	HAP3______	+1.72	151648	260990	transcription	component of heterotrimeric CCAAT-binding factor
YBR284W	__________	+1.22	115555	140850	unknown	unknown; similar to AMP deaminase
YDL023C	__________	+1.37	247583	338853	unknown	unknown
YDR153C	__________	+1.02	237799	242740	unknown	unknown
YDR522C	SPS2______	+1.11	124841	138185	meiosis	unknown
YGL215W	CLG1______	+1.12	89848	100407	cell cycle	cyclin-like (Pho85p)
YHL019C	APM2______	+1.31	254522	334179	endocytosis	AP-2 complex subunit
YIL113W	__________	+1.30	109306	142336	unknown	protein phosphatase
YJL216C	__________	+1.20	117706	140836	unknown	unknown; similar to Mal62p (glucosidase P1)
YKL212W	SAC1______	-1.23	748198	606346	secretion	ER/Golgi ATP/ADP exchanger
YLR146C	SPE4______	-1.06	330218	311363	spermine biosynthesis	spermine synthase
YML020W	__________	-1.09	137599	125976	unknown	unknown
YMR247C	__________	+1.06	753123	798697	unknown	unknown
YNL305C	__________	+1.39	285502	396669	unknown	unknown; similar to Aspergillus nidulans negative-acting
YOR045W	TOM6______	-1.13	675406	598604	mitochondrial protein targeting	outer membrane translocase component
YPL023C	MET12_____	-1.10	442022	402270	methionine biosynthesis	methylenetetrahydrofolate reductase
YPR118W	__________	-1.12	95616	85148	unknown	unknown
YBR094W	__________	+1.03	419108	432588	unknown	unknown; similar to Mec1p and porcine tubulin-tyrosine
YCR031C	RPS14A____	+1.02	11801845	12001929	protein synthesis	ribosomal protein S14A
YDL213C	__________	-1.08	968398	898024	unknown	unknown
YDR332W	__________	+1.11	197553	219946	unknown	unknown; similar to DEAD box family helicases
YER035W	EDC2______	+1.89	340340	642258	mRNA processing	unknown; genetic interaction with dcp2-7
YGL023C	PIB2______	+1.13	424143	481333	signaling (putative)	unknown; binds phosphatidylinositol 3-phosphate
YGR134W	__________	+1.21	128602	155808	unknown	unknown
YHR147C	MRPL6_____	+1.12	502959	564469	protein synthesis	ribosomal protein, mitochondrial L6
YJL023C	PET130____	+1.21	211638	255646	protein synthesis, mitochondrial	unknown
YKL022C	CDC16_____	+1.13	248867	282267	cell cycle	anaphase-promoting complex subunit
YLL023C	__________	+1.09	410908	446144	unknown	unknown
YLR328W	__________	+1.10	497299	548904	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YMR065W	KAR5______	+1.03	222064	228681	mating; nuclear fusion	coiled-coil membrane protein
YNL115C	__________	+1.15	239497	275856	unknown	unknown
YOL023W	IFM1______	-1.00	181261	180753	protein synthesis	translation initiation factor 2, mitochondrial
YOR233W	KIN4______	-1.09	595242	543862	unknown	protein kinase
YPL212C	PUS1______	-1.24	796994	641615	tRNA processing	pseudouridine synthase
YBL033C	RIB1______	+1.09	101443	110281	flavin biosynthesis	GTP cyclohydrolase II
YBR296C	PHO89_____	+1.45	261932	379417	phosphate metabolism	Na+/Pi symporter
YDL035C	GPR1______	+1.14	413368	469541	signaling, pheromone pathway	G-protein coupled receptor, coupled to Gpa2p
YDR165W	__________	-1.17	983963	841196	unknown	unknown
YDR534C	__________	+1.09	188188	204894	unknown	unknown
YFL028C	CAF16_____	+1.16	441605	512403	transport	ATP-binding cassette (ABC) family
YGL226W	__________	+1.25	243665	305351	unknown	unknown; similar to Neurospora cytochrome-c oxidase
YIL125W	KGD1______	+1.21	368748	444563	respiration	alpha-ketoglutarate dehydrogenase
YJR004C	SAG1______	-1.47	1419675	965151	mating	alpha-agglutinin
YKL224C	__________	+1.38	294640	405889	unknown	unknown; similar to Ybr301p, member of the PAU1 family
YML031W	NDC1______	-1.19	714072	599561	cytoskeleton	spindle pole body duplication
YMR260C	TIF11_____	-1.13	5984069	5287180	protein synthesis	translation initiation factor eIF1a
YNL317W	PFS2______	+1.00	739304	742704	mRNA processing	polyadenylation factor subunit
YOR057W	SGT1______	-1.12	506500	450810	mitosis (putative)	unknown; suppresses skp1 mutation
YPL035C	__________	+1.10	263435	289251	unknown	unknown
YPR130C	__________	-1.10	105223	95922	unknown	unknown
YBR106W	PHO88_____	-1.08	4695241	4333321	phosphate transport	regulator of Pho81
YCR043C	__________	+1.03	838375	860538	unknown	unknown
YDL225W	SHS1______	+1.13	577431	654000	cytokinesis	septin (putative)
YDR344C	__________	+1.06	161941	172327	unknown	unknown
YER045C	__________	+1.33	328078	435665	unknown	unknown
YGL035C	MIG1______	+1.11	279731	309119	glucose repression	transcriptional repressor
YGR146C	__________	+1.16	412091	479898	unknown	unknown
YHR159W	__________	+1.12	202353	225804	unknown	unknown
YJL035C	TAD2______	+1.12	295574	330916	tRNA processing	tRNA-specific adenosine deaminase subunit
YLL035W	GRC3______	-1.15	402380	350045	unknown	unknown; essential
YLR340W	RPP0______	+1.06	15803473	16687269	protein synthesis	ribosomal protein L10, acidic
YMR076C	PDS5______	-1.14	1233908	1085835	mitosis, sister chromatid cohesion	unknown
YNL127W	__________	-1.14	628072	551485	unknown	unknown; similar to Fus2p
YOL035C	__________	-1.06	77150	72633	unknown	unknown
YOR245C	__________	+1.16	492783	570274	unknown	unknown
YPL224C	MMT2______	-1.15	83811	72952	mitochondrial ion transport	transmembrane domain (2) protein
YBL045C	COR1______	+1.49	1098424	1634728	oxidative phosphorylation	ubiquinol cytochrome-c reductase
YDL047W	SIT4______	+1.06	509651	539566	cell cycle	type 2A related protein phosphatase
YDR175C	__________	+1.22	235491	288338	unknown	unknown
YFL038C	YPT1______	+1.29	804856	1035151	secretion	rab GTPase; ER-to-Golgi
YGL238W	CSE1______	-1.09	79441	73034	mitosis, chromosome segregation	kinetochore protein (putative)
YHL042W	__________	+1.04	131810	136472	unknown	unknown; similar to subtelomerically-encoded proteins
YIL137C	__________	+1.07	260818	278131	unknown	unknown; similar to aminopeptidases
YJR015W	__________	-1.16	439943	380059	unknown	unknown; similar to Sng1p and multidrug resistance proteins
YKR011C	__________	+1.46	243864	356511	unknown	unknown
YLR168C	(MSF1)____	+1.35	309475	417929	unknown	intramitochondrial protein sorting (putative)
YML041C	__________	+1.29	277653	359543	unknown	unknown
YMR272C	SCS7______	-1.02	740371	727007	fatty acid metabolism	ceramide hydroxylase
YNL329C	PEX6______	+1.06	462622	492410	peroxisome biogenesis	ATPase (putative)
YOR069W	VPS5______	+1.21	373810	451349	vacuolar protein targeting	sorting nexin family
YPL047W	__________	+1.21	666556	809661	unknown	unknown
YPR140W	__________	+1.14	358905	408551	unknown	unknown; similar to human Barth syndrome gene tafazzin
YBR117C	TKL2______	-1.04	237124	228774	pentose phosphate cycle	transketolase
YCR055C	__________	-1.14	557918	488904
YDL237W	__________	-1.03	681254	660949	unknown	unknown
YDR356W	NUF1______	-1.01	226810	224249	cytoskeleton	spindle pole body component
YER056C	FCY2______	-1.05	14481174	13801357	transport	purine-cytosine permease
YGL047W	__________	+1.08	352426	380894	unknown	unknown; similar to Plasmodium falciparum gametocytogenesis
YGR158C	MTR3______	-1.07	446970	417125	mRNA transport	nucleolar protein
YHR171W	APG7______	+1.25	171184	213486	autophagy	unknown; similar to ubiquitin-activating enzymes
YJL048C	__________	+1.23	228179	281712	unknown	unknown
YKL045W	PRI2______	+1.01	245858	248343	DNA replication	polymerase alpha 58 kD subunit (DNA primase)
YLL047W	__________	+1.14	116799	133100	unknown	unknown
YLR352W	__________	+1.14	193328	219594	unknown	unknown
YMR087W	__________	+1.25	316110	394334	unknown	unknown
YNL139C	RLR1______	-1.02	598826	585334	transcription	pleiotropic regulatory protein
YOL047C	__________	+1.17	165818	194065	unknown	unknown
YOR257W	CDC31_____	+1.07	469491	504264	cytoskeleton	spindle pole body component
YPL236C	__________	+1.08	130422	140381	unknown	unknown
YBL057C	__________	+1.04	733224	761018	unknown	unknown
YDL059C	RAD59_____	+1.20	180730	216593	DNA repair and recombination	unknown
YDR186C	__________	+1.09	213635	233834	unknown	unknown
YFL050C	ALR2______	+1.04	110952	115334	aluminum resistance	ion transporter (putative)
YGL250W	__________	+1.12	218882	245396	unknown	unknown
YHR002W	__________	+1.19	190541	226133	unknown	unknown; similar to Grave's disease protein; mitochondrial carrier (MCF) family
YIL149C	MLP2______	-1.12	956927	852580	nuclear protein targeting (putative)	unknown; similar to Mlp1p
YJR026W	__________	-1.60	5083377	3183817	unknown	unknown; similar to Hyr1p, Ybr244p, and glutathione peroxidases
YKR023W	__________	-1.11	89987	80887	unknown	unknown
YLR180W	SAM1______	-1.73	3831248	2215687	methionine metabolism	S-adenosylmethionine synthetase
YML051W	GAL80_____	+1.03	564563	583121	galactose regulation	transcriptional repressor
YMR284W	YKU70_____	+1.21	154464	186884	DNA repair	DNA binding; Ku70 homolog
YNR002C	FUN34_____	+1.14	218637	248504	unknown	unknown
YOR081C	__________	+1.14	250876	286962	unknown	unknown
YPL059W	GRX5______	+1.26	818340	1032570	oxidative stres response	glutaredoxin
YPR152C	__________	-1.04	190715	184159	unknown	unknown; similar to Ykl012p
YBR129C	OPY1______	+1.04	448945	465399	mating	unknown
YCR067C	SED4______	+1.14	630082	721184	secretion	ER vesicle formation
YDR001C	NTH1______	+1.73	560846	968514	trehalose metabolism	alpha, alpha-trehalase
YDR366C	__________	-1.01	8865669	8805424	unknown	unknown
YER066W	__________	+1.09	426386	463486	unknown	unknown; similar to Cdc4p, has one WD (WD-40) domain
YGL059W	__________	+1.15	186641	213861	unknown	unknown; similar to Rat branched-chain alpha-ketoacid
YGR166W	KRE11_____	+2.05	348206	715009	cell wall biogenesis	regulates beta-1,6-glucan synthesis
YHR183W	GND1______	-1.13	4138981	3674651	pentose phosphate cycle	6-phosphogluconate dehydrogenase, decarboxylating
YJL060W	__________	+1.54	552755	851357	unknown	unknown; similar to kynurenine aminotransferase
YKL057C	NUP120____	+1.13	251285	284843	nuclear protein targeting	nuclear pore protein
YLL059C	__________	+1.02	80086	81295	unknown	unknown
YLR364W	__________	+1.12	148069	165382	unknown	unknown; similar to yeast glutaredoxin-like protein
YMR099C	__________	+1.05	1616805	1697717	unknown	unknown
YNL151C	RPC31_____	-1.32	959698	726326	transcription	RNA polymerase III 31 kD subunit

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YOL057W	__________	+1.01	732520	741866	unknown	unknown
YOR269W	PAC1______	+1.06	265193	280248	cytoskeleton (putative)	unknown; required in the absence of Cin8p
YPL248C	GAL4______	+1.03	138166	142713	galactose regulation	transcriptional activator
YBL069W	AST1______	-1.07	388919	364915	plasma membrane protein targeting	targets plasma membrane ATPase
YDL071C	__________	-1.03	127052	123918	unknown	unknown
YDR198C	__________	-1.02	270698	266651	unknown	unknown
YFL062W	COS4______	+1.55	1382327	2147416	unknown	unknown; similar to subtelomerically-encoded proteins
YGL262W	__________	+1.39	113015	156650	unknown	unknown
YHR013C	ARD1______	+1.03	932162	963637	protein processing	protein N-acetyltransferase subunit
YIL160C	POT1______	+1.09	127281	138119	fatty acid metabolism	peroxisomal 3-oxoacyl CoA thiolase
YJR038C	__________	+1.04	90535	93835	unknown	unknown
YKR035C	__________	+1.13	591181	670694	unknown	unknown
YLR192C	HCR1______	-1.09	1536442	1403831	unknown	unknown; high copy suppressor of rpg1
YML062C	MFT1______	+1.16	462968	538902	mitochondrial protein targeting	mitochondrial targeting protein
YNR014W	__________	+1.05	225583	237134	unknown	unknown
YOR093C	__________	+1.07	426014	454630	unknown	unknown
YPL069C	BTS1______	+1.19	330257	393244	protein processing	geranylgeranyl diphosphate synthase
YPR160W	GPH1______	+1.01	119064	120574	glycogen metabolism	glycogen phosphorylase
YBR141C	__________	-1.08	289103	266674	unknown	unknown
YCR079W	__________	-1.01	200162	197576	unknown	protein phosphatase
YDR013W	__________	+1.00	194949	195515	unknown	unknown
YDR378C	LSM6______	+1.34	677584	907397	mRNA splicing (putative)	unknown; similar to snRNA-associated protein
YER075C	PTP3______	-1.02	405857	399621	signaling, pheromone and high osmolarity pathways	protein tyrosine phosphatase
YGL071W	RCS1______	-1.14	147460	129002	iron transport	transcriptional activator
YGR178C	PBP1______	-1.30	1030243	791417	mRNA processing	poly(A)-binding protein binding protein
YHR195W	NVJ1______	+1.21	332063	400238	vacuolar protein targeting (putative)	unknown; Vac8p binding protein
YJL072C	__________	-1.02	244047	239488	unknown	unknown
YKL069W	__________	+1.16	380458	440748	unknown	unknown
YLR004C	__________	+1.01	75738	76571	unknown	unknown; similar to allantoate transport protein
YLR376C	__________	+1.24	159408	197992	unknown	unknown
YMR111C	__________	+1.06	178304	189279	unknown	unknown; similar to Msn1p
YNL163C	__________	-1.09	234229	215647	protein synthesis	translation elongation factor eEF4
YOL069W	NUF2______	+1.13	363691	412027	cytoskeleton	spindle pole body component
YOR281C	PLP2______	-1.01	870483	865912	unknown	unknown; similar to phosducins
YMR326C	__________	-1.04	129144	124076	unknown	unknown; similar to members of the PAU1 family
YBL081W	__________	+1.14	581608	663190	unknown	37% identity to Drosophila l not protein
YDL083C	RPS16B____	+1.02	14672628	14926799	protein synthesis	ribosomal protein S16B
YDR210W	__________	+1.24	1210050	1504466	unknown	unknown
YFR006W	__________	+1.21	893802	1080853	unknown	unknown; similar to human X-pro dipeptidase
YGR011W	__________	+1.09	257788	280821	unknown	unknown
YHR024C	MAS2______	-1.19	538442	452432	protein processing	mitochondrial processing protease subunit
YJR050W	ISY1______	+1.01	278054	280185	mRNA splicing	unknown; interacts with spliceosome
YKR047W	__________	-1.07	1658551	1543212	unknown	unknown
YLR204W	QRI5______	+1.17	416444	487000	unknown	unknown
YML074C	NPI46_____	-1.23	4431009	3601028	protein folding	peptidyl-prolyl cis-trans isomerase
YMR305C	SCW10_____	+1.03	2942167	3017727	cell wall biogenesis	glucanase (putative)
YNR026C	SEC12_____	+1.01	555178	560167	secretion	ER-to-Golgi GDP/GTP exchange factor
YOR105W	__________	+1.20	349025	419599	unknown	unknown
YPL081W	RPS9A_____	+1.01	14661139	14791295	protein synthesis	ribosomal protein S9A
YPR172W	__________	+1.07	211642	227487	unknown	unknown
YBR153W	RIB7______	+1.05	415699	436899	flavin biosynthesis	HTP reductase
YCR090C	__________	-1.04	741261	710536	unknown	unknown
YDR025W	RPS11A____	-1.03	15360238	14902143	protein synthesis	ribosomal protein S11A
YDR390C	UBA2______	+1.03	582897	600003	protein degradation, ubiquitin-mediated	E1-like (ub.-activating) enzyme
YER087C	SBH1______	+1.12	1274204	1424354	secretion	ER protein translocation complex subunit
YGL083W	SCY1______	+1.21	171585	207127	unknown	unknown
YGR190C	__________	-1.20	273441	227707	unknown	unknown
YHR207C	__________	-1.02	401323	395260	unknown	unknown
YJL084C	__________	+1.04	272322	284061	unknown	unknown
YKL081W	TEF4______	-1.68	6725765	4000443	protein synthesis	translation elongation factor EF-1gamma
YLR016C	__________	-1.19	395815	333640	unknown	unknown
YLR388W	RPS29A____	-1.06	9740500	9186958	protein synthesis	ribosomal protein S29A
YMR122C	__________	+1.20	317479	380336	unknown	unknown
YNL175C	NOP13_____	-1.04	158020	152239	unknown	unknown; nucleolar protein
YOL081W	IRA2______	+1.03	394741	408313	signaling, Ras pathway	GTPase-activating protein for Ras1p and Ras2p
YOR293W	RPS10A____	+1.15	12211323	13996529	protein synthesis	ribosomal protein S10A
YPL269W	KAR9______	+1.11	746829	827687	cytoskeleton	cytoplasmic microtubule orientation
YBL093C	ROX3______	-1.08	99053	91401	transcription	RNA polymerase mediator subunit
YDL095W	PMT1______	+1.06	575069	607060	protein glycosylation	dolichyl phosphate-D-mannose:protein O-D-mannosyltransferase
YDR218C	SPR28_____	+1.03	116430	119958	sporulation	septin-related protein
YFR018C	__________	-1.39	207289	148610	unknown	unknown; similar to human glutaminyl-peptide
YGR023W	MTL1______	-1.49	283731	190261	signaling (putative)	unknown; acts with Mid2p
YHR036W	__________	-1.23	315306	257142	unknown	unknown
YIR006C	PAN1______	-1.41	179858	127377	cytoskeleton and endocytosis	actin filament organization
YJR062C	NTA1______	-1.26	102622	81154	protein degradation	amino-terminal amidase
YKR059W	TIF1______	-1.04	15952275	15309744	protein synthesis	translation initiation factor eIF4A
YLR216C	CPR6______	-1.05	1720779	1638101	protein folding (putative)	peptidyl-prolyl cus-trans isomerase
YMR316W	DIA1______	+2.09	329179	686550	pseudohyphal growth (putative)	unknown
YNR038W	DBP6______	-1.21	452455	373644	rRNA processing	RNA helicase, putative
YOR117W	RPT5______	+1.03	1524271	1565693	protein degradation	26S proteasome regulatory subunit
YPL093W	NOG1______	-1.45	1553376	1067846	unknown	nucleolar G protein
YPR184W	GDB1______	-1.01	96700	95510	glycogen utilization	glycogen debranching enzyme
YBR164C	ARL1______	+1.07	1176799	1254141	secretion	ADP-ribosylation factor-like protein
YCR101C	__________	-1.07	105598	98449	unknown	unknown; similar to Pep1p, probably represents a fragmented coding region of a pseudogene
YDR035W	ARO3______	-1.04	1071934	1028362	aromatic amino acid biosynthesis	DAHP synthase
YDR402C	DIT2______	+1.04	113510	117896	sporulation, spore wall biogenesis	synthesizes dityrosine
YER097W	__________	-1.12	110035	98069	unknown	unknown
YGL095C	VPS45_____	-1.02	92336	90280	vacuolar protein targeting	membrane protein
YGR202C	PCT1______	-1.03	313494	303264	phospholipid metabolism	cholinephosphate cytidylyltransferase
YHR216W	IMD2______	-1.62	4272542	2635579	purine biosynthesis	IMP dehydrogenase
YJL096W	MRPL49____	-1.18	81990	69695	protein synthesis	ribosomal protein, mitochondrial L49
YKL093W	MBR1______	-1.10	162680	148004	mitochondrial biogenesis	unknown
YLR028C	ADE16_____	-1.22	779034	638433	purine biosynthesis	5-aminoimidazole-4-carboxamide ribonucleotide (AICAR) transformylase/IMP cyclohydrolase
YLR400W	__________	-1.17	374445	320057	unknown	unknown
YMR134W	__________	+1.17	378971	442306	unknown	unknown
YNL187W	__________	-1.06	158364	149773	unknown	unknown
YOL093W	__________	-1.10	91796	83806	unknown	unknown
YOR304W	ISW2______	-1.06	94186	89256	unknown	unknown; similar to Drosophila nucleosome remodeling factor ISW1
YPL281C	ERR2______	-1.09	88919	81603	unknown	unknown; similar to enolase
YAL013W	DEP1______	+1.00	103475	103790	phospholipid metabolism	regulator

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YBR177C	EHT1______	+1.14	259184	295023	unknown	alcohol acyl transferase (putative)
YCRX07W	__________	+1.01	101606	102890
YDR048C	__________	-1.05	124863	118534	unknown	unknown
YDR415C	__________	+1.02	104751	106722	unknown	unknown; similar to bacterial leucyl aminopeptidase
YER110C	KAP123____	-1.12	356795	318506	nuclear protein targeting	beta-karyopherin
YGL108C	__________	+1.13	217696	245730	unknown	unknown
YGR215W	__________	+1.23	298791	367838	unknown	unknown
YIL012W	__________	+1.02	91386	92881	unknown	unknown
YJL109C	__________	-1.37	658226	481582	unknown	unknown
YKL105C	__________	+1.51	172503	260687	unknown	unknown
YLR039C	RIC1______	+1.02	139567	141847	transcription	(putative) transcriptional regulator of rRNA and proteins
YLR411W	CTR3______	-1.38	68723	49814	transport	copper transporter
YMR146C	TIF34_____	-1.17	2599538	2229880	protein synthesis	translation initiation factor eIF3, P39 subunit
YNL200C	__________	-1.10	70341	64151	unknown	unknown
YOL104C	NDJ1______	-1.11	113967	102321	meiosis, chromosome segregation	unknown
YOR316C	COT1______	-1.15	61954	54025	Co2+ ion homeostasis	mitochondrial membrane protein
YPR011C	__________	-1.22	78962	64473	unknown	unknown; similar to human Grave's disease carrier protein
YBL104C	__________	+1.40	101702	141921	unknown	morphology (putative)
YCL011C	GBP2______	+1.25	300847	375491	unknown	telomere-associated protein (putative)
YDL108W	KIN28_____	+1.16	338307	391701	transcription	protein kinase; also TFIIH subunit
YDR231C	COX20_____	+1.33	256135	341209	respiration	req. for cytochrome oxidase assembly
YEL012W	UBC8______	+1.46	171974	251381	protein degradation, ubiquitin-mediated	E2 ub.-conjugating enzyme
YFR031C	SMC2______	+1.07	14667638	15647556	mitosis, chromosome condensation and segregation	unknown
YGR034W	RPL26B____	+1.10	82132	89974	protein synthesis	ribosomal protein L26B
YHR048W	__________	+1.16	1381143	1601743	unknown	major facilitator superfamily
YIR018W	YAP5______	+1.12	84125	94099	transcription	basic leu zipper transcription factor
YJR075W	HOC1______	-1.25	732875	584812	protein glycosylation	putative mannosyltransferase
YKR072C	SIS2______	+1.10	87854	96250	cell cycle and ion homeostasis	unknown
YML098W	TAF19_____	-1.22	70535	57749	transcription	TFIID 19 kD subunit
YNL012W	SPO1______	-1.04	189948	181844	meiosis (spor.)	transcriptional regulator
YNR051C	BRE5______	-1.22	67352	55039	secretion (putative)	unknown; brefeldin A sensitive
YOR130C	ORT1______	-1.04	311552	300428	arginine biosynthesis	amino acid transporter
YPL106C	SSE1______	-1.27	73610	57941	calmodulin signaling	HSP70 family
YPR197C	__________	-1.18	183090	155015	unknown	unknown
YAL025C	MAK16_____	+1.17	96069	112498	dsRNA virus propagation	unknown; essential gene
YBR189W	RPS9B_____	+1.32	10704384	14148186	protein synthesis	ribosomal protein S9B
YCRX19W	__________	+1.09	108188	118132
YDR060W	__________	-1.39	1160553	837552	unknown	unknown; similar to human CCAAT-binding protein (GB:Z49209)
YDR427W	RPN9______	+1.28	1012994	1298800	protein degradation	26S proteasome regulatory subunit
YER121W	__________	+1.23	194802	239193	unknown	unknown
YGL120C	PRP43_____	-1.28	309299	242491	mRNA splicing	spliceosome disassembly factor; RNA helicase
YGR227W	DIE2______	+1.10	112593	124276	glucosylation?	glucosyltransferase
YIL023C	__________	+2.54	318650	808890	unknown	unknown; similar to Atx2
YJL121C	RPE1______	+1.12	1437481	1603062	pentose phosphate cycle	Ribulose-5-phosphate 3-epimerase
YKL117W	SBA1______	+1.13	5263558	5953875	protein folding	Hsp90 associated co-chaperone
YLR051C	__________	-1.06	660665	625974	unknown	unknown
YLR423C	APG17_____	-1.16	72205	62165	unknown	unknown; similar to human cytokeratin 9 (SP:P35527)
YMR157C	__________	-1.02	371042	364428	unknown	unknown
YNL212W	VID27_____	-1.18	62708	53243	vacuolar protein targeting (putative)	unknown
YOL116W	MSN1______	+1.03	334027	345260	nutrient sensing	transcriptional activator
YOR328W	PDR10_____	-1.18	68176	57967	transport	ATP-binding cassette (ABC) family
YPR023C	EAF3______	+1.07	580419	622961	unknown	acetyltrasnferase complex component (putative)
YBR003W	COQ1______	-1.02	96640	95072	ubiquinone biosynthesis	exaprenyl pyrophosphate synthetase
YCL024W	KCC4______	-1.01	127089	125853	bud growth	protein kinase
YDL120W	YFH1______	+1.21	616445	746839	iron homeostasis, mitochondrial	frataxin homolog
YEL023C	__________	+1.08	101164	109707	unknown	unknown
YFR040W	SAP155____	+1.28	633939	810421	cell cycle	Sit4p-associated protein
YGR041W	BUD9______	+1.29	416875	538600	bud site selection, bipolar	unknown
YHR058C	MED6______	+1.07	261254	280299	transcription	RNA polymerase II mediator subunit
YIR028W	DAL4______	+1.20	207735	248982	allantoin utilization	allantoin permease
YJR088C	__________	+1.17	682596	797164	unknown	unknown
YKR084C	HBS1______	-1.02	529685	519072	unknown	unknown; similar to translation elongation factor EF-1alpha
YLR239C	__________	-1.01	273169	269445	unknown	unknown; similar to E. coli LipB protein which is
YML108W	__________	-1.12	410002	366555	unknown	unknown
YNL024C	__________	-1.18	181777	154384	unknown	unknown
YNR063W	__________	-1.06	69910	66107	unknown	unknown; similar to transcription factors, has Zn[2]-Cys[6]
YOR142W	LSC1______	+1.49	859187	1277454	TCA cycle	succinyl-CoA ligase alpha subunit
YPL118W	MRP51_____	-1.02	304481	299054	protein synthesis	ribosomal protein, mitochondrial small subunit
YBR201W	DER1______	+1.15	217493	249901	protein degradation, ER	unknown
YDR072C	IPT1______	+1.60	488489	783427	sphingolipid biosynthesis	inositolphosphotransferase 1
YDR439W	LRS4______	+1.20	255974	308239	silencing (rDNA) (putative)	unknown
YER133W	GLC7______	+1.25	1074648	1344603	glycogen metabolism	protein phosphatase
YGL132W	__________	+1.13	344382	390415	unknown	unknown
YGR239C	PEX21_____	-1.21	451541	372290	peroxisome biogenesis (putative)	unknown, "peroxin"
YIL035C	CKA1______	-1.05	779821	741911	cell cycle (putative)	casein kinase II, catalytic subunit
YJL133W	MRS3______	+1.08	426000	461050	transport	mitochondrial carrier
YKL129C	MYO3______	+1.22	140185	170959	cytoskeleton	myosin, class I
YLR063W	__________	-1.09	127832	116930	unknown	unknown
YLR433C	CNA1______	-1.12	329351	294824	signaling	calcineurin catalytic A subunit
YMR168C	CEP3______	-1.16	254179	219865	mitosis	kinetochore protein complex, 71 KD subunit
YNL224C	__________	+1.01	92213	93185	unknown	unknown
YOL128C	__________	-1.12	246836	219819	unknown	protein kinase
YOR340C	RPA43_____	-1.48	1062426	719207	transcription	RNA polymerase I 36 kD subunit
YPR035W	GLN1______	+1.00	5331912	5347784	glutamine biosynthesis	glutamine synthetase
YBR013C	__________	+1.37	217501	298052	unknown	unknown
YCL036W	__________	-1.15	274859	239690	unknown	unknown
YDL131W	LYS21_____	-1.20	1233238	1026637	lysine biosynthesis	homocitrate synthase
YDR255C	__________	+1.19	162266	193326	unknown	unknown
YEL035C	UTR5______	+1.06	109625	116186	unknown	unknown
YFR052W	RPN12_____	+1.28	881128	1130785	protein degradation	26S proteasome regulatory subunit
YGR053C	__________	+1.28	119626	153391	unknown	unknown
YHR069C	RRP4______	+1.03	461032	475780	rRNA processing	3'->5' exoribonuclease
YIR040C	__________	-1.01	137603	136489	unknown	unknown; similar to Yil174p, Yil175p, and Ycr103p, member of
YJR099W	YUH1______	+1.03	374936	385787	protein degradation, ubiquitin-mediated	ubiquitin-specific protease
YKR096W	__________	+1.05	96801	101711	unknown	unknown; similar to aldehyde dehydrogenase
YLR251W	__________	+1.27	157201	199470	unknown	unknown; similar to mouse MPV17 protein
YML119W	__________	+1.31	394694	518761	unknown	unknown
YNR075W	COS10_____	-1.03	61915	60377	unknown	unknown; similar to subtelomerically-encoded proteins
YOR152C	__________	+1.86	255213	474013	unknown	unknown
YPL130W	SPO19_____	+1.00	94283	94295	sporulaiton	GPI-protein, meiosis-specific

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YAL045C	__________	+1.06	86474	91841	unknown	unknown
YBR213W	MET8______	+1.10	166692	184169	sulfate assimilation	siroheme synthase
YDR084C	__________	+1.21	371497	448699	unknown	unknown
YDR451C	__________	+1.13	253828	287412	unknown	unknown; similar to Yox1p, which binds Leu-tRNA (SP:P34161)
YER143W	DDI1______	+1.15	285253	328073	unknown	unknown; induced by DNA damage
YGL144C	__________	-1.01	109838	108854	unknown	unknown
YGR251W	__________	-1.24	303328	245048	unknown	unknown
YIL047C	SYG1______	-1.14	528643	465017	signaling (putative)	pheromone pathway
YJL145W	__________	-1.15	628035	548253	unknown	unknown
YKL141W	SDH3______	+1.31	614275	802253	TCA cycle, oxidative phosphorylation	succinate dehydrogenase cytochrome b
YLR075W	RPL10_____	-1.03	15833675	15334151	protein synthesis	ribosomal protein L10
YLR445W	__________	+1.09	95128	103270	unknown	unknown
YMR178W	__________	+1.17	796601	929786	unknown	unknown
YNL236W	SIN4______	+1.01	68362	69170	transcription	RNA polymerase II mediator subunit
YOL140W	ARG8______	-1.09	213323	196202	arginine biosynthesis	acetylornithine aminotransferase
YOR350C	MNE1______	+1.08	282034	305229	unknown	unknown; similar to Lucilia illustris mitochondria cytochrome oxidase
YPR047W	MSF1______	+1.27	193381	246114	protein synthesis	tRNA synthetase, mitochondrial, phenylalanyl, subunit
YBR025C	__________	+1.16	105561	121954	unknown	unknown
YCL048W	__________	-1.02	417758	411329	unknown	unknown; similar to Ecm33p and Sps2p
YDL142C	CRD1______	+1.26	248248	312812	lipid biosynthesis	cardiolipin synthase
YDR263C	DIN7______	+1.19	214480	256129	DNA repair (putative)	DNA damage-inducible
YEL047C	__________	-1.09	707421	649421	unknown	putative fumarate reductase
YGR065C	VHT1______	-1.06	376662	353797	transport	H+-biotin symporter
YHR079C	SAE3______	-1.08	660830	610019	meiosis, recombination	unknown
YJR111C	__________	+1.05	262404	276559	unknown	unknown
YLR260W	LCB5______	-1.00	307449	306316	sphingolipid metabolism	long chain base kinase
YML131W	__________	+1.39	427235	591927	unknown	unknown
YNL046W	__________	+1.36	568252	774589	unknown	unknown
YOR164C	__________	-1.08	1118147	1030616	unknown	unknown
YPL142C	__________	+1.14	11286030	12858694	unknown	unknown
YAL059W	ECM1______	-1.36	654223	482004	cell wall biogenesis	unknown
YBR225W	__________	+1.24	163793	202425	unknown	unknown
YDR096W	GIS1______	+1.26	151147	190612	unknown	unknown
YDR463W	STP1______	+1.03	323431	334517	tRNA splicing	transcription
YER153C	PET122____	+1.14	104603	119300	protein synthesis	translation activator of COX3
YGL156W	AMS1______	+1.34	208116	279316	cell wall catabolism	vacuolar alpha-mannosidase
YGR263C	__________	+1.14	176496	200852	unknown	unknown
YIL059C	__________	+1.23	272837	336890	unknown	unknown
YJL157C	FAR1______	-1.06	262238	248387	cell cycle	Cdc28p kinase inhibitor
YKL153W	__________	+1.05	15772249	16634883	unknown	unknown
YLR087C	__________	+1.10	363763	398352	unknown	unknown
YLR457C	NBP1______	+1.14	209515	238591	unknown	Nap1p-binding protein
YMR190C	SGS1______	+1.07	117228	125194	mitosis, chromosome segregation	putative DNA helicase
YNL248C	RPA49_____	+1.00	102846	102947	transcription	RNA polymerase I 46 kD subunit
YOL152W	FRE7______	-1.13	218349	193496	unknown	unknown; similar to Fre1p and Fre2p
YOR362C	PRE10_____	+1.09	1668964	1814739	protein degradation	20S proteasome subunit C1 (alpha7)
YPR059C	__________	-1.09	615323	563769	unknown	unknown
YBR037C	SCO1______	+1.05	82755	86541	respiration	Cox1p and Cox2p stability (putative)
YCL060C	__________	+1.02	114221	116672
YDL154W	MSH5______	+1.07	99289	106325	DNA repair	MutS homolog; also recombination
YDR275W	__________	+1.01	363936	369323	unknown	unknown
YGR077C	PEX8______	+1.21	331770	400128	peroxisome biogenesis	unknown
YHR091C	MSR1______	-1.04	291689	280159	protein synthesis	tRNA synthetase, arginyl
YJR123W	RPS5______	-1.00	15769665	15761768	protein synthesis	ribosomal protein S5
YLR271W	__________	+1.07	296821	317381	unknown	unknown; similar to retrovirus-related protease
YMR010W	__________	+1.23	482647	594962	unknown	unknown
YNL056W	__________	+1.63	620132	1009115	unknown	unknown
YOR176W	HEM15_____	+1.01	876492	885569	heme biosynthesis	ferrochelatase (protoheme ferrolyase)
YPL154C	PEP4______	-1.00	96041	95864	protein degradation	vacuolar aspartyl protease
YAR002W	NUP60_____	+1.07	510463	545162	nuclear protein targeting	nuclear pore protein
YBR237W	PRP5______	+1.08	192799	208796	mRNA splicing	RNA helicase
YDR106W	ARP10_____	+1.06	123745	131384	cytoskeleton (putative)	actin-related protein
YDR475C	__________	+1.05	136675	142868	unknown	unknown
YER163C	__________	+1.29	473386	610018	unknown	unknown
YGL168W	__________	+1.23	745658	915399	unknown	unknown
YGR275W	RTT102____	+1.18	464877	549006	transposition (putative)	unknown; regulator of Ty1 transposition
YIL069C	RPS24B____	-1.04	15796491	15228061	protein synthesis	ribosomal protein S24B
YJL169W	__________	-1.08	910531	843249	unknown	unknown
YKL165C	MCD4______	-1.04	517590	499671	sporulation	morphogenesis checkpoint
YLR099C	ICT1______	+1.37	336352	462176	copper ion homeostasis (putative)	unknown
YNL260C	__________	+1.12	315252	352021	unknown	unknown
YOL164W	__________	+1.03	213799	219659	unknown	unknown; similar to Pseudomonas sp. alkyl sulfatase
YOR374W	ALD4______	+2.13	401425	856651	ethanol utilization	mitochondrial aldehyde dehydrogenase
YPR071W	__________	-1.04	92599	88889	unknown	unknown; similar to Yil029p (GB:Z49219)
YBR049C	REB1______	-1.13	470745	418389	transcription	transcription factor
YCL075W	__________	-1.03	102239	99679	unknown	encoded by Ty5-1
YDL166C	__________	-1.04	768770	737332	unknown	unknown
YDR287W	__________	+1.22	284435	347320	unknown	unknown; similar to inositol monophosphatase (SP:P29218,
YEL070W	__________	-1.06	147161	138294	unknown	unknown; similar to E. coli D-mannonate oxidoreductase
YGR089W	__________	+1.01	261378	263019	unknown	unknown; similar to human desmoplakin I PIR:A35536
YHR103W	SBE22_____	+1.01	118835	119520	bud growth	unknown
YJR135C	MCM22_____	+1.11	144853	161486	mitosis, chromosome segregation	unknown
YLR283W	__________	+1.21	202759	244834	unknown	unknown
YMR022W	QRI8______	+1.32	528230	698946	protein degradation, ubiquitin-mediated	E2 ub.-conjugating enzyme
YNL068C	FKH2______	-1.06	289104	272278	unknown	unknown; similar to Drosophila forkhead
YOR188W	MSB1______	-1.16	888056	762393	polarized growth	unknown
YPL166W	__________	-1.11	220970	199842	unknown	unknown
YAR027W	__________	+1.01	106718	108021	unknown	unknown; similar to subtelomerically-encoded proteins
YBR249C	ARO4______	-1.30	2322871	1782870	aromatic amino acid biosynthesis	2-dehydro-3-deoxyphosphoheptonate aldolase
YDR118W	APC4______	+1.04	198232	205703	cell cycle	anaphase-promoting complex subunit
YDR487C	RIB3______	-1.02	1220602	1200889	flavin biosynthesis	3,4-dihydroxy-2-butanone 4-phosphate synthase
YER173W	RAD24_____	-1.09	348878	319832	DNA repair; cell cycle	exonuclease, putative; checkpoint protein
YGL180W	APG1______	-1.16	75935	65342	autophagy	protein kinase
YGR287C	__________	-1.02	174411	171037	unknown	unknown; similar to alpha-D-glucosidase (maltase) (YGR287C
YIL080W	__________	-1.01	297958	296030	unknown	unknown
YJL181W	__________	+1.05	95463	100292	unknown	unknown
YKL177W	__________	-1.47	532748	362601	unknown	unknown
YLR111W	__________	-1.19	90782	76112	unknown	unknown
YMR213W	CEF1______	+1.01	336386	340332	unknown	unknown; similar to S. pombe cdc5+
YNL272C	SEC2______	+1.03	130507	134843	secretion	GDP/GTP exchange factor for Sec4p

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YOR010C	TIR2______	+1.02	496750	507783	unknown	unknown; induced by cold shock
YOR386W	PHR1______	-1.14	162048	142396	DNA repair	deoxyribodipyrimidine photolyase
YPR083W	__________	+1.07	267573	285545	unknown	unknown; similar to Halobacterium holobium cell surface
YBR061C	__________	-1.05	431374	410704	unknown	unknown; similar to Ctr86p and E. coli ftsJ
YCLX11W	__________	-1.08	1142410	1059796
YDL178W	AIP2______	-1.01	518822	515107	unknown	actin interacting protein
YDR299W	BFR2______	-1.26	515464	410435	secretion	unknown
YER004W	__________	+1.08	946804	1022002	unknown	unknown
YGR101W	__________	-1.11	208937	187912	unknown	unknown
YHR115C	__________	-1.06	718268	675032	unknown	unknown
YJR147W	HMS2______	-1.42	382679	269175	pseudohyphal growth	transcription factor
YLR294C	__________	+1.47	652316	959745	unknown	unknown
YNL080C	__________	-1.11	490825	442383	unknown	unknown
YOR198C	BFR1______	-1.13	2047995	1809439	secretion	unknown
YPL178W	CBC2______	+1.17	1136147	1332365	meiosis, recombination	nuclear cap-binding protein complex small subunit
YAR047C	__________	-1.01	108632	107358	unknown	unknown
YBR261C	__________	-1.14	686090	604450	unknown	unknown
YDR130C	FIN1______	+1.17	228249	267957	cell cycle (putative)	intermediate filament protein
YDR499W	LCD1______	+1.11	222265	247091	unknown	unknown
YER185W	__________	+1.14	132742	150891	unknown	unknown; similar to Rtm1p
YGL192W	IME4______	-1.13	96601	85387	meiosis	transcription factor
YIL091C	__________	-1.19	68462	57459	unknown	unknown
YJL193W	__________	-1.12	260425	232169	unknown	unknown; similar to Sly41p and to triose
YKL189W	HYM1______	+1.24	222625	277069	unknown	unknown; similar to Aspergillus nidulans hymA which is
YLR123C	__________	-1.03	78091	75669	unknown	unknown; similar to class I family of aminoacyl-tRNA
YMR224C	MRE11_____	-1.05	190086	181534	meiosis, recombination	ds break formation complex subunit
YNL284C	MRPL10____	-1.04	85307	82091	protein synthesis	ribosomal protein, mitochondrial L10
YOR022C	__________	+1.08	141257	153120	unknown	unknown
YPR095C	SYT1______	+1.04	91489	95325	unknown	unknown; similar to S. typhimurium T1pA alpha-helical
YBR073W	RDH54_____	+1.37	516162	705912	meiosis	helicase
YCR011C	ADP1______	+1.24	478844	594244	transport	(putative) ATP-dependent permease
YDL190C	UFD2______	+1.14	327857	374398	protein degradation, ubiquitin-mediated	unknown; may influence multi-Ub chain topology
YDR311W	TFB1______	-1.02	380102	371224	transcription	TFIIH 75 kD subunit
YER014W	HEM14_____	+1.16	299289	346522	heme biosynthesis	protoporphyrinogen oxidase
YGR111W	__________	-1.24	68990	55733	unknown	unknown; similar to southern house mosquito carboxylesterase
YHR127W	HSN1______	-1.05	968111	925459	unknown	suppresses SEC4 dominant negative mutant
YJR159W	SOR1______	+1.22	179350	219393	sorbitol metabolism	sorbitol dehydrogenase
YLR306W	UBC12_____	+1.10	132936	146132	protein degradation, ubiquitin-mediated	E2 ub.-conjugating enzyme
YNL092W	__________	-1.04	89192	85458	unknown	unknown
YOR210W	RPB10_____	-1.05	261200	247985	transcription	shared subunit of RNA polymerases I, II, and III
YPL189W	GUP2______	-1.08	85807	79323	glycerol utilization	glycerol transporter (putative)
YBL010C	__________	-1.03	94063	91467	unknown	unknown
YBR273C	__________	+1.47	167997	246636	unknown	unknown
YDL012C	__________	+1.16	323007	375617	unknown	unknown
YDR142C	PEX7______	+1.22	213355	260874	peroxisome biogenesis	import receptor
YDR511W	__________	-1.02	106554	104694	unknown	unknown
YFL010W	AUA1______	+1.48	572710	850279	amino acid uptake	ammonia regulation of GAP1 activity
YGL204C	__________	+1.08	80733	87293	unknown	unknown
YIL102C	__________	+1.03	82807	85622	unknown	unknown
YJL205C	NCE101____	+1.06	78283	83167	secretion, non-classical	unknown
YKL201C	MNN4______	+1.07	78261	84054	protein glycosylation	phosphatidylinositol kinase homolg
YLR135W	__________	+1.01	86751	88016	unknown	unknown
YML010W	SPT5______	-1.20	61529	51311	transcription	elongation factor
YMR237W	__________	-1.10	63740	57945	unknown	unknown; similar to Chs6p/Csd3p
YNL294C	__________	-1.09	65686	60425	unknown	unknown
YOR034C	AKR2______	-1.33	68625	51632	endocytosis of Ste3p	unknown
YPL012W	__________	-1.22	63342	51774	unknown	unknown
YPR107C	YTH1______	-1.17	65965	56583	mRNA 3'-end processing	cleavage/polyadenylation specificity factor subunit
YBR084W	MIS1______	+1.08	90653	98160	folate metabolism	C1-tetrahydrofolate synthase
YCR022C	__________	+1.05	93156	97773	unknown	unknown
YDL202W	MRPL11____	+1.28	186357	238604	protein synthesis	ribosomal protein, mitochondrial L11
YDR321W	ASP1______	-1.43	1966557	1375935	asparagine utilization	L-asparaginase I
YER024W	__________	+1.01	88088	88543	unknown	unknown; similar to Yat1p
YGL012W	ERG4______	+1.08	92323	99416	sterol metabolism	sterol C-24 reductase
YGR123C	PPT1______	-1.40	842300	602299	unknown	protein phosphatase
YHR138C	__________	+1.77	230053	407235	unknown	unknown
YJL012C	PHM3______	+1.07	89731	95723	phosphate metabolism (putative)	polyphosphate synthetase (putative)
YKL011C	CCE1______	-1.15	427864	373025	tRNA processing	cruciform cutting endonuclease
YLL012W	__________	+1.08	86771	93296	unknown	unknown; similar to human triacylglycerol lipase
YLR317W	__________	+1.07	139327	149772	unknown	unknown
YMR054W	STV1______	-1.29	64216	49606	vacuolar acidification	vacuolar H+-ATPase V0 domain 102 KD subunit
YNL104C	LEU4______	-1.35	2090585	1549598	leucine biosynthesis	2-isopropylmalalate synthase
YOL012C	HTA3______	-1.20	73294	61257	chromatin structure	histone-related
YOR222W	ODC2______	-1.32	66978	50685	unknown	unknown; similar to mitochondrial ADP/ATP carrier proteins
YPL201C	__________	-1.28	63425	49741	unknown	unknown
YAR071W	PHO11_____	-1.10	76756	69739	phosphate metabolism	secreted acid phosphatase
YBL022C	PIM1______	+1.47	238381	350168	respiration	mitochondrial ATP-dependent protease
YBR285W	__________	+1.35	111845	150692	unknown	unknown
YDL024C	DIA3______	+1.67	109659	183040	pseudohyphal growth (putative)	unknown
YDR154C	__________	+1.22	11342275	13813587	unknown	unknown
YDR523C	SPS1______	+1.20	224863	270689	meiosis	protein kinase
YFL018C	LPD1______	+1.30	209164	271788	TCA cycle	dihydrolipoamide dehydrogenase
YGL216W	KIP3______	-1.01	266945	265169	mitosis	kinesin related protein
YHL020C	OPI1______	+1.35	676481	911611	phospholipid metabolism	negative regulator of phospholipid biosynthesis
YIL114C	POR2______	-1.13	166789	147221	mitochondrial transport	porin, anion channel
YJL217W	__________	-1.81	2914372	1607812	unknown	unknown
YKL213C	DOA1______	-1.10	791112	719420	protein degradation, ubiquitin-mediated	unknown
YLR147C	SMD3______	+1.04	247016	258023	mRNA splicing	core snRNP protein
YML021C	UNG1______	-1.05	391201	370882	DNA repair	uracil DNA glycosylase
YMR250W	GAD1______	+1.45	185030	268576	glutamate metabolism	glutamate decarboxylase
YNL306W	__________	-1.11	198860	178354	protein synthesis	ribosomal protein, mitochondrial small subunit
YOR046C	DBP5______	-1.13	1545800	1364152	mRNA export	RNA helicase
YPL024W	NCE4______	+1.05	260525	272937	cell separation	negative regulator of CTS1 expression
YPR119W	CLB2______	-1.10	242341	220450	cell cycle	G2/M cyclin
YBR095C	__________	+1.32	270942	358112	unknown	unknown; similar to Drosophila cyclin B
YCR032W	BPH1______	+1.13	91715	103290	transport	acetic acid export pump (putative)
YDL214C	__________	+1.05	111520	116583	unknown	protein kinase
YDR333C	__________	+1.16	382910	444928	unknown	unknown
YER036C	__________	-1.64	2006061	1221243	unknown	unknown; similar to members of the ATP-binding cassette
YGL024W	__________	-1.08	116518	107770	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YGR135W	PRE9______	+1.14	1590572	1820838	protein degradation	20S proteasome subunit Y13 (alpha3)
YHR148W	IMP3______	-1.15	553019	480065	rRNA processing	U3 snoRNP protein
YJL024C	APS3______	+1.08	402743	433372	vacuolar protein targeting	AP-3 complex subunit
YKL023W	__________	+1.16	389732	450423	unknown	unknown
YLL024C	SSA2______	-1.55	9578828	6173419	ER and mitochondrial translocation	cytosolic HSP70
YLR329W	REC102____	-1.04	168955	162450	meiosis, recombination	ds break formation complex subunit
YMR066W	SOV1______	-1.45	115773	79583	respiration (putative)	unknown; synthesis of Var
YNL116W	__________	-1.17	63729	54556	unknown	unknown
YOL024W	__________	-1.09	111180	102379	unknown	unknown
YOR234C	RPL33B____	-1.14	8528565	7512369	protein synthesis	ribosomal protein L33B
YPL213W	LEA1______	-1.10	102609	93334	mRNA splicing	U2 snRNP protein
YBL034C	STU1______	-1.02	87481	85930	mitosis	spindle component
YBR297W	MAL33_____	+1.07	168784	180097	maltose metabolism	regulator of maltose metabolic genes
YDL036C	__________	-1.01	330619	325846	unknown	unknown; similar to Rib2p
YDR166C	SEC5______	-1.02	91925	89805	secretion	exocyst complex subunit
YDR535C	__________	-1.05	89628	85544	unknown	unknown
YFL029C	CAK1______	+1.23	311115	381629	cell cycle	protein kinase
YGL227W	VID30_____	+1.09	73082	79294	vacuolar protein targeting (putative)	unknown; TOR inhibitor
YHL031C	GOS1______	-1.05	351871	335982	secretion	Golgi SNARE
YIL126W	STH1______	+1.02	79136	80407	chromatin structure	chromatin remodeling complex subunit
YJR005W	APL1______	-1.19	225500	189414	secretion	vesicle coat component
YKL225W	__________	+1.08	82070	88673	unknown	unknown
YML032C	RAD52_____	-1.13	60482	53425	DNA repair and recombination	Rad51p cofactor
YMR261C	TPS3______	+1.03	612657	631150	trehalose utilization	alpha,alpha-trehalose-phosphate synthase
YNL318C	HXT14_____	-1.18	62219	52753	transport	hexose permease
YOR058C	ASE1______	+1.04	317891	329941	mitosis	spindle midzone component
YPL036W	PMA2______	-1.18	60608	51485	H+ homeostasis	plasma membrane H+-ATPase
YPR131C	NAT3______	+1.13	361551	409797	protein processing	protein N-acetyltransferase
YBR107C	IML3______	+1.18	198401	233168	mitosis, chromosome segregation (putative)	unknown
YCR044C	PER1______	+1.38	107716	148383	protein processing (putative)	unknown
YDL226C	GCS1______	+1.09	856725	932323	secretion	vesicle transport; GAP for ARF
YDR345C	HXT3______	-1.07	4802739	4497161	transport	hexose permease
YER046W	__________	+1.25	213414	265986	unknown	unknown
YGL036W	MTC2______	+1.21	1036902	1257890	unknown	unknown
YGR147C	NAT2______	+1.16	268373	310232	protein processing	N-acetyltransferase for N-terminal methionine
YHR160C	PEX18_____	+1.17	193311	226702	peroxisome biogenesis (putative)	unknown, "peroxin"
YJL036W	SNX4______	+1.13	285673	322934	protein targeting (putative)	unknown; similar to human sorting nexins
YKL034W	__________	+1.01	197935	199592	unknown	unknown
YLL036C	PRP19_____	-1.10	345929	314583	mRNA splicing; DNA repair	non-snRNP spliceosome component
YLR341W	__________	+1.18	124703	147630	unknown	unknown
YMR077C	__________	+1.12	221778	249438	unknown	unknown; similar to Snf7p
YNL128W	TEP1______	+1.13	252577	284812	unknown	protein phosphatase
YOL036W	__________	+1.06	73818	78415	unknown	unknown
YOR246C	__________	-1.20	665683	553550	unknown	unknown
YPL225W	__________	+1.06	1549958	1643642	unknown	unknown
YBL046W	__________	+1.10	88658	97283	unknown	unknown
YDL048C	STP4______	+1.44	317074	457492	tRNA splicing	unknown
YDR176W	NGG1______	+1.07	143273	153256	chromatin structure	histone acetyltransferase complex subunit
YFL039C	ACT1______	+1.12	6383442	7130448	cytoskeleton	actin
YGL239C	__________	-1.08	203752	189235	unknown	unknown
YHL043W	ECM34_____	-1.04	152147	145685	cell wall biogenesis	unknown
YIL138C	TPM2______	-1.36	397462	292606	cytoskeleton	tropomyosin
YJR016C	ILV3______	-1.78	1869124	1050630	isoleucine and valine biosynthesis	dihydroxyacid dehydratase
YKR012C	__________	-1.15	306099	265310	unknown	unknown
YLR169W	__________	-1.03	103071	99811	unknown	unknown
YML042W	CAT2______	-1.08	82010	76153	fatty acid transport	carnitine O-acetyltransferase
YNL330C	RPD3______	-1.14	80827	71069	chromatin structure	histone deacetylase
YOR070C	GYP1______	-1.13	132466	117744	signaling	GTPase-activating protein for Ypt1p
YPL048W	CAM1______	-1.40	5101496	3652088	protein synthesis	translation elongation factor EF-1gamma
YPR141C	KAR3______	+1.04	502517	520828	mating; nuclear fusion; mitosis	kinesin-like protein
YBR118W	TEF2______	+1.04	15974257	16608640	protein synthesis	translation elongation factor EF-1 alpha
YCR056W	__________	-1.15	4353995	3791283
YDL238C	__________	-1.52	3719675	2443411	unknown	unknown
YDR357C	__________	+1.06	945125	1001033	unknown	unknown
YER056C	RPL34A____	-1.44	2324526	1610380	protein synthesis	ribosomal protein L34A
YGL048C	RPT6______	+1.04	534536	555514	protein degradation	26S proteasome regulatory subunit
YGR159C	NSR1______	-1.72	2178142	1265757	nuclear protein targeting	NLS-binding protein
YHR172W	SPC97_____	-1.25	1128893	905274	cytoskeleton	spindle pole body component
YJL049W	__________	+1.15	341950	392508	unknown	unknown
YKL046C	__________	-1.01	834745	828142	unknown	unknown
YLL048C	YBT1______	-1.10	216342	195915	transport	bile acid transporter of ABC family
YLR353W	BUD8______	-1.12	325792	291982	bud site selection, bipolar	unknown
YMR088C	__________	-1.22	613817	505121	unknown	unknown
YNL140C	__________	+1.22	297151	362069	unknown	unknown
YOL048C	__________	+1.11	250037	278707	unknown	unknown
YOR258W	__________	+1.07	222615	238484	unknown	unknown
YPL237W	SUI3______	-1.43	1578716	1101424	protein synthesis	translation initiation factor eIF2 beta subunit
YBL058W	SHP1______	+1.04	77744	80910	glucose repression	(putative) Glc7p regulatory subunit
YDL060W	__________	-1.10	133487	121610	unknown	unknown
YDR187C	__________	-1.64	221514	134660	unknown	unknown
YFL051C	__________	+1.09	85741	93511	unknown	unknown; similar to Flo1p family of proteins
YGL251C	HFM1______	-1.13	143774	127295	unknown	DNA/RNA helicase, putative
YHR003C	__________	+2.31	1240079	2864072	unknown	unknown; similar to Ykl027p and weak similarity to E.
YIL150C	DNA43_____	+1.62	199678	324004	DNA replication	unknown
YJR027W	__________	+1.05	16008005	16738064	unknown	unknown; similar to E. coli molybdopterin-converting factor
YKR024C	DBP7______	-1.10	2321164	2118426	ribosome biogenesis	putative RNA helicase
YLR181C	__________	-1.13	1334002	1177749	unknown	unknown
YMR285C	__________	+1.01	398168	403600	unknown	unknown
YNR003C	RPC34_____	-1.17	77238	66202	transcription	RNA polymerase III 34 kD subunit
YOR082C	__________	+1.15	292073	334575	unknown	unknown
YPR153W	__________	-1.12	89738	80293	unknown	unknown
YBR130C	SHE3______	-1.21	352966	291544	cell polarity	asymmetric HO expression
YCR068W	__________	+1.02	157048	160282	unknown	unknown
YDR002W	YRB1______	+1.02	4316206	4387653	nuclear protein targeting	GTPase-activating protein for Ran
YDR367W	__________	+1.05	538235	564444	unknown	unknown
YGL060W	__________	-1.00	167398	167269	unknown	unknown
YGR167W	CLC1______	+1.24	1985173	2468480	endocytosis and secretion	clathrin light chain
YHR184W	SSP1______	+1.06	334770	353922	meiosis,nuclear division and spore formation	unknown
YJL061W	NUP82_____	+1.07	77789	82932	nuclear protein targeting	nuclear pore protein
YKL058W	TOA2______	+1.20	561077	674549	transcription	TFIIA 13.5 kD subunit

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YLL060C	GTT2______	+1.04	107710	111881	glutathione metabolism	glutathione transferase
YLR365W	__________	-1.01	93703	92821	unknown	unknown
YMR100W	MUB1______	+1.02	76862	78749	bud site selection	unknown
YNL152W	__________	-1.02	310985	304056	unknown	unknown
YOL058W	ARG1______	-1.09	418400	382599	arginine biosynthesis	arginosuccinate synthetase
YOR270C	VPH1______	+1.09	63575	69351	vacuolar acidification	vacuolar H+-ATPase 95 kD subunit
YPL249C	__________	-1.07	69805	65302	unknown	unknown
YBL070C	__________	+1.07	83944	89555	unknown	unknown
YDL072C	__________	+1.95	942417	1836068	unknown	unknown
YDR199W	__________	+1.33	277284	367915	unknown	unknown
YFL063W	__________	+1.13	174766	198116	unknown	unknown; similar to Gin11p and Ykl225p
YGL263W	COS12_____	+1.04	76265	79363	unknown	unknown; similar to subtelomerically-encoded proteins
YHR014W	SPO13_____	+1.00	113755	114150	meiosis	negative regulator of M phase (putative)
YIL161W	__________	+1.09	241520	263935	unknown	unknown
YJR039W	__________	+1.18	158767	187983	unknown	unknown; similar to Paramecium tetraurelia NADH
YKR036C	CAF4______	-1.10	291795	264149	catabolite repression	component of CCR4 transcriptional complex
YLR193C	__________	-1.04	336558	324358	unknown	unknown; similar to Msf1p
YML063W	RPS1B_____	+1.07	15488110	16573151	protein synthesis	ribosomal protein S1B
YMR295C	__________	+1.17	2737258	3204329	unknown	unknown
YNR015W	SMM1______	-1.08	87762	81571	protein synthesis, mitochondrial (putative)	unknown
YOR094W	ARF3______	+1.00	554720	554787	secretion	GTP-binding ADP-ribosylation factor
YPL070W	__________	+1.21	106932	129228	unknown	unknown
YPR161C	SGV1______	+1.00	654599	656700	cell cycle	protein kinase
YBR142W	MAK5______	-1.01	81906	81361	mRNA splicing	RNA helicase
YCR080W	__________	+1.03	86680	89336
YDR014W	__________	+1.08	101682	109491	unknown	unknown
YDR379W	RGA2______	+1.16	116561	134825	signaling	Rho-GTPase activating protein
YER076C	__________	+1.12	143840	160728	unknown	unknown; similar to KHR1 killer toxin
YGL072C	__________	+1.24	266331	329953	unknown	unknown
YGR179C	__________	+1.20	209070	251067	unknown	unknown; similar to chicken myosin heavy chain, cardiac
YHR196W	__________	-1.08	520891	484473	unknown	unknown
YJL073W	JEM1______	+1.15	358714	412449	mating; nuclear fusion	DnaJ-like protein
YKL070W	__________	+1.17	121883	142662	unknown	unknown; similar to Bacillus subtilis transcriptional
YLR005W	SSL1______	+1.03	458901	471588	transcription	TFIIH subunit
YLR377C	FBP1______	-1.04	155934	150623	gluconeogenesis	fructose-1,6-bisphosphatase
YMR112C	MED11_____	+1.08	312250	338060	transcription	RNA polymerase II mediator subunit
YNL164C	__________	-1.07	182474	170139	unknown	unknown
YOL070C	__________	-1.05	495148	471073	unknown	unknown
YOR282W	__________	-1.26	218738	173908	unknown	unknown
YPL258C	THI21_____	+1.10	162369	178993	thiamine metabolism (putative)	unknown
YBL082C	RHK1______	-1.23	360970	293482	protein glycosylation	Dol-P-Man dependent alpha-1,3- mannosyltransferase (putative)
YDL084W	SUB2______	+1.09	4042365	4423547	mRNA splicing	RNA helicase
YFR007W	__________	+1.08	91427	98328	unknown	unknown
YGR012W	__________	+1.00	477083	478278	unknown	unknown; similar to Cys4p
YHR025W	THR1______	-1.30	1182835	906584	threonine biosynthesis	homoserine kinase
YIL172C	__________	-1.19	120855	101200	unknown	unknown; similar to alpha-D-glucosidase (maltase)
YJR051W	OSM1______	-1.08	290310	268355	anaerobic growth (putative)	fumarate reductase
YKR048C	NAP1______	-1.43	1381819	964592	chromatin structure	nucleosome assembly protein
YLR205C	__________	-1.07	108125	101184	unknown	unknown
YML075C	HMG1______	-1.13	111730	98786	sterol metabolism	3-hydroxy-3-methylglutaryl-coenzyme A reductase
YMR306W	FKS3______	-1.10	112303	101984	unknown	unknown; similar to Gls1p and Gls2p
YNR027W	__________	+1.09	93362	101614	unknown	unknown
YOR106W	VAM3______	+1.23	195347	240884	vacuole biogenesis	t-SNARE
YPL082C	MOT1______	-1.03	88418	85653	transcription	putative helicase
YPR173C	VPS4______	-1.04	90481	86602	vacuolar protein targeting	AAA ATPase family
YBR154C	RPB5______	-1.10	1005491	916382	transcription	shared subunit of RNA polymerases I, II, and III
YCR091W	KIN82_____	+1.04	83695	87364	unknown	protein kinase
YDR026C	__________	+1.15	174927	200974	unknown	unknown; similar to Reb1p
YDR391C	__________	+1.56	248070	386689	unknown	unknown
YER087W	__________	+1.11	136671	151758	unknown	unknown; similar to E. coli prolyl-tRNA synthetase
YGL084C	GUP1______	-1.01	84888	83640	glycerol utilization	glycerol transporter (putative)
YGR191W	HIP1______	-1.28	888785	694444	transport	histidine permease
YHR208W	BAT1______	-1.42	3068214	2165918	branched chain amino acid degradation	transaminase
YJL085W	EXO70_____	-1.24	77723	62548	secretion	exocyst complex subunit
YKL082C	__________	-1.40	1102251	785174	unknown	unknown
YLR017W	MEU1______	-1.58	251920	159475	glucose derepression	regulator of ADH2 expression
YLR389C	STE23_____	-1.07	353762	331640	mating	a-factor processing protease (putative)
YMR123W	PKR1______	+1.14	97154	110553	killer toxin sensitivity (Pichia farinosa toxin)	unknown
YNL176C	__________	+1.15	392189	450893	unknown	unknown
YOL082W	__________	-1.08	85103	78881	unknown	unknown
YOR294W	RRS1______	-1.36	1004888	740126	ribosome biogenesis (putative)	unknown
YPL270W	MDL2______	-1.20	94176	78709	transport	ATP-binding cassette (ABC) family
YBL094C	__________	+1.06	84211	89580	unknown	unknown; similar to Neurospora crassa chitin synthase
YDL096C	__________	-1.19	125635	105890	unknown	unknown
YDR219C	__________	+1.16	243288	283087	unknown	unknown
YFR019W	FAB1______	+1.14	86169	98469	mitosis	putative PIP 5-kinase
YGR024C	__________	-1.13	69189	61032	unknown	unknown
YHR037W	PUT2______	-1.11	79796	71719	amino acid biosynthesis	delta-1-pyrroline-5-carboxylate dehydrogenase
YIR007W	__________	-1.11	69119	62188	unknown	unknown; similar to endoglucanase
YJR063W	RPA12_____	-1.14	786500	689758	transcription	RNA polymerase I subunit
YKR060W	__________	-1.21	69135	57207	unknown	unknown
YLR217W	__________	-1.19	492675	414892	unknown	unknown
YML087C	__________	-1.10	84808	77299	unknown	unknown
YNR039C	ZRG17_____	-1.13	80333	71276	unknown	unknown; similar to Anopheles mitochondrial NADH
YOR118W	__________	-1.13	83743	74270	unknown	unknown
YPL094C	SEC62_____	-1.14	86382	75668	secretion	ER protein translocation subcomplex subunit
YPR185W	APG13_____	-1.15	85952	74515	autophagy	unknown
YBR165W	UBS1______	+1.14	101343	115615	protein degradation, ubiquitin-mediated	regulates Cdc34p (ubiquitin-conjugating enzyme)
YCR102C	__________	+1.03	83588	86306	unknown	unknown; similar to Bacillus subtilis sorbitol
YDR036C	__________	+1.05	221832	233387	unknown	unknown; similar to enoyl CoA hydratase
YDR403W	DIT1______	+1.05	84740	89125	sporulation, spore wall biogenesis	synthesizes dityrosine precursor
YER098W	UBP9______	+1.18	156253	183652	protein degradation, ubiquitin-mediated	ubiquitin C-terminal hydrolase
YGL096W	__________	+1.05	84013	87837	unknown	unknown; similar to Cup9p
YGR203W	__________	-1.08	65220	60485	unknown	unknown
YHR217C	__________	-1.09	62228	56881	unknown	unknown
YJL097W	__________	+1.06	65129	68759	unknown	unknown
YKL094W	YJU3______	-1.08	61900	57569	unknown	unknown; similar to E.coli hypothetical protein
YLR029C	RPL15A____	+1.04	67044	69676	protein synthesis	ribosomal protein L15A
YLR401C	__________	+1.11	65051	72253	unknown	unknown; similar to R. capsulatus protein nifR3
YMR135C	__________	-1.09	86387	79074	unknown	unknown

		factor	median_fitted_data	median_fitted_data	gene annotation	gene annotation
		condition1	condition0(CONTROL)	condition1	functional category	description
		delta_fks1	wt, strain FY834	delta_fks1


YNL188W	KAR1______	-1.05	85337	81149	cytoskeleton	nuclear fusion; also spindle
YOL094C	RFC4______	-1.03	84464	81801	DNA replication	replication factor C, 37 kDa subunit
YPL282C	__________	-1.07	83164	77907	unknown	unknown; similar to other subtelomerically-encoded proteins